cluster # 12216

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Oryza sativa
cluster # 12216 cluster # 12216 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12216#0 length = 1552 sequences # 8

consensus_12216#1 length = 673 sequences # 1
consensus_12216#2 length = 625 sequences # 1

consensusID : consensus_12216#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1552
fasta sequence

                              [TCCAACCTTAAGATCCCACATCGAACCCAAATTCCGAACCTCCAATCGAATTCCTCCGATTCCCCGGCGACGCAGAACCCGATGCTCTGCCAACAAGCGGTGCCAATCCACCGCGGGCGCAGGAGCGCCCGGCGGCGGTGGCCGCTGGCCGTCCGGCGGCCGCCGTCGCCGGCTGCCCGGCTGCTTCCGGAGTCGTCCTCAACCACAGCAGGTGCCCTTGACCTCCTTCGCTACGGGCGGAACTTCCGTCGAGCCTCGCCGCCGCCGCGCCCACCGTTGGTAAATTCTGCTGAGCCTTCGTCTGCACAAGTGCTGCGAGAACCAGATGTTTCCTTCTCTGTGGGGTTGCTCAGTAATACAGCATCGAAAGAACCGATAACTGCACACACCTCTTCCTCTTCCTCTCCACTTACTGTGCAGCATGACGACACTGAAACTTCGACGCCATCACAGTGCTGCCTGTGGTCATCTCCTGGGTCATCCATTTTGGTCAGGAGACCTCGTGGTTGGTATTTTGTATTCTACATCAGGATGGATCCTGGGGGGTGTTTCCACATGTATCCCGATGTGGGTTGTGGGCCATATCAGAGTCTGTCAGAAGTTGATGATGCTATAAACCAACATCTTCATGACCTGCGGATTCCAGAAATGGGTGAGGAGCTTGATAGGCTCCCTCTAATGGAGAAGATGATACGGCAAGCGATGTACTGGCCTGACGGCAAGCGGAAACGTTGCAAGTCAGCTGGGTATTTTGAAAAAGACAAGTGCCATTTGATCCAAGCTTTAGTGGAGAAGTATAATGAGGATCATACTCTTTTGGGGGATTTTGCGTATGAACTTAAGGATTTTTTGCAACATGGAGTAATTTATGAGGAT-CAAAGGC-AGTACC-ACCATTTGAA-TTTCACTGC-GAAGGTGAA-AAGAGCTGATGGGTGTGGTGTGGAGAACCTATTCTTTGCTGAAATATCACATATGCAAGGAGAATATGAATGGGTGGTCAGCTGTTGCTG-CATAATTAAACCTAGTGCTAACGGTCATTGCTATGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCACCCTAACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTACCTTTTGGGGTCAATTCCTATGCGCGCAATAATGATGAGGAACTCAGTGTCAAGGATGAGGAAGATATGCTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGGATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTCTACTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACACAAGTTAAACTTATCACCATC-GAACTTGTCCACCAGTGCCCCAGCAGTAGAAGCGCATCTTATCACAATTGGTGGTAAATTTAGTGGAATGGATGAACATCCACGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCATAACATTTCAGTATTTCTTCTCAAAAAAAAAAAAAA]

[+] EMBL CB684431             [TCCAACCTTAAGATCCCACATCGAACCCAAATTCCGAACCTCCAATCGAATTCCTCCGATTCCCCGGCGACGCAGAACCCGATGCTCTGCCAACAAGCGGTGCCAATCCACCGCGGGCGCAGGAGCGCCCGGCGGCGGTGGCCGCTGGCCGTCCGGCGGCCGCCGTCGCCGGCTGCCCGGCTGCTTCCGGAGTCGTCCTCAACCACAGCAGGTGCCCTTGACCTCCTTCGCTACGGGCGGAACTTCCGTCGAGCCTCGCCGCCGCCGCGCCCACCGTTGGTAAATTCTGCTGAGCCTTCGTCTGCACAAGTGCTGCGAGAACCAGATGTTTCCTTCTCTGTGGGGTTGCTCAGGAATACAGCATCGAAAGAACCGATAACTGCACACACCTCTTCCTCTTCCTCTCCACTTACTGTGCAGCATGACGACACTGAAACTTCGACGCCATCACAGTGCTGCCTGTGGTCATCTCCTGGGTCATCCATTTTGGTCAGGAGACCTCGTGGTTGGTATTTTGTATTCTACATCAGGATGGATCCTGGGGGGTGTTTCCACATGTATCCCGATGTGGGTTGTGGGCCATATCAGAGTCTGTCAGAAGTTGATGATGCTATAAACCAACATCTTCATGACCTGCGGATTCCAGAAATGGGTGAGGAGCTTGATAGGCTCCCTCTAATGGAGAAGATGATACGGCAAGCGATGTACTGGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB642633             [         AAGATCCCACATCGAACCCAAATTCCGAACCTCCAATCGAATTCCTCCGATTCCCCGGCGACGCAGAACCCGATGCTCTGCCAACAAGCGGTGCCAATCCACCGCGGGCGCAGGAGCGCCCGGCGGCGGTGGCCGCTGGCCGTCCGGCGGCCGCCGTCGCCGGCTGCCCGGCTGCTTCCGGAGTCGTCCTCAACCACAGCAGGTGCCCTTGACCTCCTTCGCTACGGGCGGAACTTCCGTCGAGCCTCGCCGCCGCCGCGCCCACCGTTGGTAAATTCTGCTGAGCCTTCGTCTGCACAAGTGCTGCGAGAACCAGATGTTTCCTTCTCTGTGGGGTTGCTCAGTAATACAGCATCGAAAGAACCGATAACTGCACACACCTCTTCCTCTTCCTCTCCACTTACTGTGCAGCATGACGACACTGAAACTTCGACGCCATCACAGTGCTGCCTGTGGTCATCTCCTGGGTCATCCATTTTGGTCAGGAGACCTCGTGGTTGGTATTTTGTATTCTACATCAGGATGGATCCTGGGGGGTGTTTCCACATGTATCCCGATGTGGGTTGTGGGCCATATCAGAGTCTGTCAGAAGTTGATGATGCTATAAACCAACATCTTCATGACCTGCGGATTCCAGAAATGGGTGAGGAGCTTGATAGGCTCCCTCTAATGGAGAAGATGATACGGCAAGCGATGTACTGGCCTGACGGCAAGCGGAAACGTTGCAAGTCAGCTGGGTATTTTGAAAAAGACAAGTGCCATTTGATCCAAGCTTTAGTGGAGAAGTATAATGAGGATCATACTCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK073180             [                           CAAATTCCGAACCTCCAATCGAATTCCTCCGATTCCCCGGCGACGCAGAACCCGATGCTCTGCCAACAAGCGGTGCCAATCCACCGCGGGCGCAGGAGCGCCCGGCGGCGGTGGCCGCTGGCCGTCCGGCGGCCGCCGTCGCCGGCTGCCCGGCTGCTTCCGGAGTCGTCCTCAACCACAGCAGGTGCCCTTGACCTCCTTCGCTACGGGCGGAACTTCCGTCGAGCCTCGCCGCCGCCGCGCCCACCGTTGGTAAATTCTGCTGAGCCTTCGTCTGCACAAGTGCTGCGAGAACCAGATGTTTCCTTCTCTGTGGGGTTGCTCAGTAATACAGCATCGAAAGAACCGATAACTGCACACACCTCTTCCTCTTCCTCTCCACTTACTGTGCAGCATGACGACACTGAAACTTCGACGCCATCACAGTGCTGCCTGTGGTCATCTCCTGGGTCATCCATTTTGGTCAGGAGACCTCGTGGTTGGTATTTTGTATTCTACATCAGGATGGATCCTGGGGGGTGTTTCCACATGTATCCCGATGTGGGTTGTGGGCCATATCAGAGTCTGTCAGAAGTTGATGATGCTATAAACCAACATCTTCATGACCTGCGGATTCCAGAAATGGGTGAGGAGCTTGATAGGCTCCCTCTAATGGAGAAGATGATACGGCAAGCGATGTACTGGCCTGACGGCAAGCGGAAACGTTGCAAGTCAGCTGGGTATTTTGAAAAAGACAAGTGCCATTTGATCCAAGCTTTAGTGGAGAAGTATAATGAGGATCATAATCTTTTGGGGGATTTTGCGTATGAACTTAAGGATTTTTTGCAACATGGAGTAATTTATGAGGAT CAAAGGC AGTACC ACCATTTGAA TTTCACTGC GAAGGTGAA AAGAGCTGATGGGTGTGGTGTGGAGAACCTATTCTTTGCTGAAATATCACATATGCAAGGAGAATATGAATGGGTGGTCAGCTGTTGCTG CATAATTAAACCTAGTGCTAACGGTCATTGCTATGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCACCCTAACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTACCTTTTGGGGTCAATTCCTATGCGCGCAATAATGATGAGGAACTCAGTGTCAAGGATGAGGAAGATATGCTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGGATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTCTACTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACACAAGTTAAACTTATCACCATC GAACTTGTCCACCAGTGCCCCAGCAGTAGAAGCGCATCTTATCACAATTGGTGGTAAATTTAGTGGAATGGATGAACATCCACGCTAATGGTT                                                              ]
[+] EMBL BU667286             [                                                                                                                                                                                                                     GCCCTTGACCTCCTTCGCTACGGGCGGAACTTCCGTCGAGCCTCGCCGCCGCCGCGCCCACCGTTGGTAAATTCTGCTGAGCCTTCGTCTGCACAAGTGCTGCGAGAACCAGATGTTTCCTTCTCTGTGGGGTTGCTCAGTAATACAGCATCGAAAGAACCGATAACTGCACACACCTCTTCCTCTTCCTCTCCACTTACTGTGCAGCATGACGACACTGAAACTTCGACGCCATCACAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB684432             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTTGGGGGATTTTGCGTATGAACTTAAGGATTTTTTGCAACATGGAGTAATTTATGAGGAT CAAAGGC AGTACC ACCATTTGAA TTTCACTGC GAAGGTGAA AAGAGCTGATGGGTGTGGTGTGGAGAACCTATTCTTTGCTGAAATATCACATATGCAAGGAGAATATGAATGGGTGGTCAGCTGTTGCTG CATAATTAAACCTAGTGCTAACGGTCATTGCTATGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCCCCCTAACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTCCCTTTTGGGGTCAATTCCTATGCGCGCAATAATGATGAGGAACTCAGTGTCAAGGATGAGGAAGATATGCTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGGATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGACCCTTGCATTTTTTTACTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACCCAAGTTAAACTTATCCCCATC GAACTTGTCCACCAGTGCCCCACCAAAGGAAGCG                                                                                                                         ]
[-] EMBL CA759086             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GATCCAAAGCCAAGTCCCNGCCCTTTGAAGTTTCACTCCGGAAGGTGAAGAAACGCTGATGGGTGTGGTGTGGAGAACCTTTTCTTGGCTGAAATATCA ATATGCAAGGACAATATGAATGGGTGGTCAGCTGTT CTGCCATAATTAAACCTAGTGCTAACGGTCATTGCTATGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCACCCTAACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTACCTTTTGGGGTCAATTCCTATGCGCGCAATAATGATGAGGAACTCAGTGTCAAGGATGAGGAAGATATGCTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGGATTCAAGAGACCCATCCCTAAATTTGCAACCCGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTCTACTAGATGTGTTAGGCAAGTGTGCTATGGTATACATTCATGTAACACAAGTTAAACTTATCACCATC GAACTTGTCCACCAGTGCCCCAGCAGTAGAAGCGCATCTTATCACAACTGGTGGTAAATTTAGTGGAATGGATGAACATCCACGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCATAACATTTCAGTATTTCTTCTCAAAAAAAAAAAAAA]
[+] EMBL AK063023             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAT CAAAGGC AGTACC ACCATTTGAA TTTCACTGC GAAGGTGAA AAGAGCTGATGGGTGTGGTGTGGAGAACCTATTCTTTGCTGAAATATCACATATGCAAGGAGAATATGAATGGGTGGTCAGCTGTTGCTG CATAATTAAACCTAGTGCTAACGGTCATTGCTATGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCACCCTAACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTACCTTTTGGGGTCAATTCCTATGCGCGCAATAATGATGAGGAACTCAGTGTCAAGGATGAGGAAGATATGCTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGGATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTCTACTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACACAAGTTAAACTTATCACCATC GAACTTGTCCACCAGTGCCCCAGCAGTAGAAGCGCATCTTATCACAATTGGTGGTAAATTTAGTGGAATGGATGAA ATCCACGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCATAACAT                              ]
[+] EMBL BE228942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cgagCACAAGTT AGCTTATCACCATCAGAACTTGTCCACCAGTGCCCCAGCAGTAGAAGCGCATCTTATCACAATTGGTGGTAAATTTAGTGGAATGGATGAACATCCACGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCATAACATTTCAGTATTTCTTCTCAAg           ]




>consensus_12216#0
TCCAACCTTAAGATCCCACATCGAACCCAAATTCCGAACCTCCAATCGAATTCCTCCGAT
TCCCCGGCGACGCAGAACCCGATGCTCTGCCAACAAGCGGTGCCAATCCACCGCGGGCGC
AGGAGCGCCCGGCGGCGGTGGCCGCTGGCCGTCCGGCGGCCGCCGTCGCCGGCTGCCCGG
CTGCTTCCGGAGTCGTCCTCAACCACAGCAGGTGCCCTTGACCTCCTTCGCTACGGGCGG
AACTTCCGTCGAGCCTCGCCGCCGCCGCGCCCACCGTTGGTAAATTCTGCTGAGCCTTCG
TCTGCACAAGTGCTGCGAGAACCAGATGTTTCCTTCTCTGTGGGGTTGCTCAGTAATACA
GCATCGAAAGAACCGATAACTGCACACACCTCTTCCTCTTCCTCTCCACTTACTGTGCAG
CATGACGACACTGAAACTTCGACGCCATCACAGTGCTGCCTGTGGTCATCTCCTGGGTCA
TCCATTTTGGTCAGGAGACCTCGTGGTTGGTATTTTGTATTCTACATCAGGATGGATCCT
GGGGGGTGTTTCCACATGTATCCCGATGTGGGTTGTGGGCCATATCAGAGTCTGTCAGAA
GTTGATGATGCTATAAACCAACATCTTCATGACCTGCGGATTCCAGAAATGGGTGAGGAG
CTTGATAGGCTCCCTCTAATGGAGAAGATGATACGGCAAGCGATGTACTGGCCTGACGGC
AAGCGGAAACGTTGCAAGTCAGCTGGGTATTTTGAAAAAGACAAGTGCCATTTGATCCAA
GCTTTAGTGGAGAAGTATAATGAGGATCATACTCTTTTGGGGGATTTTGCGTATGAACTT
AAGGATTTTTTGCAACATGGAGTAATTTATGAGGATCAAAGGCAGTACCACCATTTGAAT
TTCACTGCGAAGGTGAAAAGAGCTGATGGGTGTGGTGTGGAGAACCTATTCTTTGCTGAA
ATATCACATATGCAAGGAGAATATGAATGGGTGGTCAGCTGTTGCTGCATAATTAAACCT
AGTGCTAACGGTCATTGCTATGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCACCCT
AACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTACCTTTTGGGGTCAATTCC
TATGCGCGCAATAATGATGAGGAACTCAGTGTCAAGGATGAGGAAGATATGCTAAGACGT
ATGTACAAGGGCCTAGATAAGCCAGGCGGATTCAAGAGACCCATCCCTAAATTTGCAACA
CGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTT
GCATTTTTCTACTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACACAAG
TTAAACTTATCACCATCGAACTTGTCCACCAGTGCCCCAGCAGTAGAAGCGCATCTTATC
ACAATTGGTGGTAAATTTAGTGGAATGGATGAACATCCACGCTAATGGTTGCTGAAAGCT
GAAATGACAATTTGCATAACATTTCAGTATTTCTTCTCAAAAAAAAAAAAAA

consensusID : consensus_12216#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 673
fasta sequence

                              [GTGTGGAGAACCTATTCTTTGCTGAAATATCACATATGCAAGGAGAATATGAATGGGTGGTCAGCTGTTGCTGCATAATTAAACCTAGTGCTAACGGTCATTGCTATGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCCCCCTAACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTACCTTTTGGGGTCAATTCCTATGCGGGCAATAATGATGAGGAACTCAGTGTATGACAATTTATTTTTGACAAGCATCTATCATTGTTGTATTGCTTTAAGTACTCAACAGTTAATAGCCTGATTTTTTTTTTTACAGGTCAAGGATGAGGAAGATATGTTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGGGGATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTTTATTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACCCAAGTTAAACTTATCCCCATTGAACTTGTCCCCCAGTGCCCCAGCAGTAGAAGGGCATTTTATCCCAATTGGTGGTAAATTTAGTGGAATGGATGAACATCCCCGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCGTAA]

[-] EMBL CB642634             [GTGTGGAGAACCTATTCTTTGCTGAAATATCACATATGCAAGGAGAATATGAATGGGTGGTCAGCTGTTGCTGCATAATTAAACCTAGTGCTAACGGTCATTGCTATGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCCCCCTAACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTACCTTTTGGGGTCAATTCCTATGCGGGCAATAATGATGAGGAACTCAGTGTATGACAATTTATTTTTGACAAGCATCTATCATTGTTGTATTGCTTTAAGTACTCAACAGTTAATAGCCTGATTTTTTTTTTTACAGGTCAAGGATGAGGAAGATATGTTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGGGGATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTTTATTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACCCAAGTTAAACTTATCCCCATTGAACTTGTCCCCCAGTGCCCCAGCAGTAGAAGGGCATTTTATCCCAATTGGTGGTAAATTTAGTGGAATGGATGAACATCCCCGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCGTAA]




>consensus_12216#1
GTGTGGAGAACCTATTCTTTGCTGAAATATCACATATGCAAGGAGAATATGAATGGGTGG
TCAGCTGTTGCTGCATAATTAAACCTAGTGCTAACGGTCATTGCTATGGCTGTAGGAATA
ATGGTTATGTTGGCATGAAGCCCCCTAACAATGATGCATACAGTGGTGGTCATTTGGATG
GATATTTACCTTTTGGGGTCAATTCCTATGCGGGCAATAATGATGAGGAACTCAGTGTAT
GACAATTTATTTTTGACAAGCATCTATCATTGTTGTATTGCTTTAAGTACTCAACAGTTA
ATAGCCTGATTTTTTTTTTTACAGGTCAAGGATGAGGAAGATATGTTAAGACGTATGTAC
AAGGGCCTAGATAAGCCAGGGGGATTCAAGAGACCCATCCCTAAATTTGCAACACGAATT
GTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTT
TTTTATTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACCCAAGTTAAAC
TTATCCCCATTGAACTTGTCCCCCAGTGCCCCAGCAGTAGAAGGGCATTTTATCCCAATT
GGTGGTAAATTTAGTGGAATGGATGAACATCCCCGCTAATGGTTGCTGAAAGCTGAAATG
ACAATTTGCGTAA

consensusID : consensus_12216#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 625
fasta sequence

                              [CGTCATCTAATTAGTGACGCGCATGAATGGATTATCGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTCGGGCGCAAGTGAAATACCACTACTTTTTGGATGGATATTTACCTTTTGGGGTCAATTCCTATGCGCGCAATAATGATGAGGAACTCAGTGTCAAGGATGAGGAAGATATGCTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGGATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTCTACTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACACAAGTTAAACTTATCACCATCGAACTTGTCCACCAGTGCCCCAGCAGTAGAAGCGCATCTTATCACAATTGGTGGTAAATTTAGTGGAATGGATGAACATCCACGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCATA]

[+] EMBL AK062902             [CGTCATCTAATTAGTGACGCGCATGAATGGATTATCGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTCGGGCGCAAGTGAAATACCACTACTTTTTGGATGGATATTTACCTTTTGGGGTCAATTCCTATGCGCGCAATAATGATGAGGAACTCAGTGTCAAGGATGAGGAAGATATGCTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGGATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTCTACTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTAACACAAGTTAAACTTATCACCATCGAACTTGTCCACCAGTGCCCCAGCAGTAGAAGCGCATCTTATCACAATTGGTGGTAAATTTAGTGGAATGGATGAACATCCACGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCATA]




>consensus_12216#2
CGTCATCTAATTAGTGACGCGCATGAATGGATTATCGAGATTCCCACTGTCCCTGTCTAC
TATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACC
CTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGG
GAGCCCTCGGGCGCAAGTGAAATACCACTACTTTTTGGATGGATATTTACCTTTTGGGGT
CAATTCCTATGCGCGCAATAATGATGAGGAACTCAGTGTCAAGGATGAGGAAGATATGCT
AAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGGATTCAAGAGACCCATCCCTAAATT
TGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGCTGGTGTGGAAGCTGGTTGAAGCTG
GAACCTTGCATTTTTCTACTAGATGTGTTAGGCAAATGTGCTATCGTATACATTCATGTA
ACACAAGTTAAACTTATCACCATCGAACTTGTCCACCAGTGCCCCAGCAGTAGAAGCGCA
TCTTATCACAATTGGTGGTAAATTTAGTGGAATGGATGAACATCCACGCTAATGGTTGCT
GAAAGCTGAAATGACAATTTGCATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12216#0      TCCAACCTTAAGATCCCACATCGAACCCAAATTCCGAACCTCCAATCGAATTCCTCCGAT 60
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      TCCCCGGCGACGCAGAACCCGATGCTCTGCCAACAAGCGGTGCCAATCCACCGCGGGCGC 120
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      AGGAGCGCCCGGCGGCGGTGGCCGCTGGCCGTCCGGCGGCCGCCGTCGCCGGCTGCCCGG 180
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      CTGCTTCCGGAGTCGTCCTCAACCACAGCAGGTGCCCTTGACCTCCTTCGCTACGGGCGG 240
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      AACTTCCGTCGAGCCTCGCCGCCGCCGCGCCCACCGTTGGTAAATTCTGCTGAGCCTTCG 300
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      TCTGCACAAGTGCTGCGAGAACCAGATGTTTCCTTCTCTGTGGGGTTGCTCAGTAATACA 360
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      GCATCGAAAGAACCGATAACTGCACACACCTCTTCCTCTTCCTCTCCACTTACTGTGCAG 420
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      CATGACGACACTGAAACTTCGACGCCATCACAGTGCTGCCTGTGGTCATCTCCTGGGTCA 480
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      TCCATTTTGGTCAGGAGACCTCGTGGTTGGTATTTTGTATTCTACATCAGGATGGATCCT 540
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      GGGGGGTGTTTCCACATGTATCCCGATGTGGGTTGTGGGCCATATCAGAGTCTGTCAGAA 600
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      GTTGATGATGCTATAAACCAACATCTTCATGACCTGCGGATTCCAGAAATGGGTGAGGAG 660
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      CTTGATAGGCTCCCTCTAATGGAGAAGATGATACGGCAAGCGATGTACTGGCCTGACGGC 720
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      AAGCGGAAACGTTGCAAGTCAGCTGGGTATTTTGAAAAAGACAAGTGCCATTTGATCCAA 780
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      GCTTTAGTGGAGAAGTATAATGAGGATCATACTCTTTTGGGGGATTTTGCGTATGAACTT 840
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      AAGGATTTTTTGCAACATGGAGTAATTTATGAGGATCAAAGGCAGTACCACCATTTGAAT 900
consensus_12216#1      ------------------------------------------------------------
consensus_12216#2      ------------------------------------------------CGTCATCTAATT 12
                                                                                   

consensus_12216#0      TTCACTGCGAAGGTGAAAAGAGCTGATGGGTGTGGTGTGGAGAACCTATTCTTTGCTGAA 960
consensus_12216#1      ----------------------------------GTGTGGAGAACCTATTCTTTGCTGAA 26
consensus_12216#2      AGTGACGCGCATGAATGGATTATCGAGATTCCCACTGTCCCTG-TCTACTATCCAGCGAA 71
                                                          ***       *** * *     ***

consensus_12216#0      ATATCACATATGCAAGGAGAATATGAATGGGTGGTCAGCTGTTGCTGCATAATTAAACCT 1020
consensus_12216#1      ATATCACATATGCAAGGAGAATATGAATGGGTGGTCAGCTGTTGCTGCATAATTAAACCT 86
consensus_12216#2      ACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTT 131
                       *   **   * *  *   *  *  *        *   *         *    ** * * *

consensus_12216#0      AGTGCTAA-CGGTCATTGCTA--TGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCAC 1077
consensus_12216#1      AGTGCTAA-CGGTCATTGCTA--TGGCTGTAGGAATAATGGTTATGTTGGCATGAAGCCC 143
consensus_12216#2      GACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGG-----AGCCC 186
                           ***  * * * ***  *  ** **  **   *   ** ** ** **     *** *

consensus_12216#0      CCTAACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTACCTTTTGGGGTCAAT 1137
consensus_12216#1      CCTAACAATGATGCATACAGTGGTGGTCATTTGGATGGATATTTACCTTTTGGGGTCAAT 203
consensus_12216#2      TCGGGCGCAAGTG-AAATACCACTACTT-TTTGGATGGATATTTACCTTTTGGGGTCAAT 244
                        *   *     ** * * *    *  *  *******************************

consensus_12216#0      TCCTATGCGCGCAATAATGATGAGGAACTCAGTGT------------------------- 1172
consensus_12216#1      TCCTATGCGGGCAATAATGATGAGGAACTCAGTGTATGACAATTTATTTTTGACAAGCAT 263
consensus_12216#2      TCCTATGCGCGCAATAATGATGAGGAACTCAGTGT------------------------- 279
                       ********* *************************                         

consensus_12216#0      ------------------------------------------------------------
consensus_12216#1      CTATCATTGTTGTATTGCTTTAAGTACTCAACAGTTAATAGCCTGATTTTTTTTTTTACA 323
consensus_12216#2      ------------------------------------------------------------
                                                                                   

consensus_12216#0      ---CAAGGATGAGGAAGATATGCTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGG 1229
consensus_12216#1      GGTCAAGGATGAGGAAGATATGTTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGGGG 383
consensus_12216#2      ---CAAGGATGAGGAAGATATGCTAAGACGTATGTACAAGGGCCTAGATAAGCCAGGCGG 336
                          ******************* ********************************** **

consensus_12216#0      ATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGC 1289
consensus_12216#1      ATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGC 443
consensus_12216#2      ATTCAAGAGACCCATCCCTAAATTTGCAACACGAATTGTGTGGAAAACTGAGGAGGAAGC 396
                       ************************************************************

consensus_12216#0      TGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTCTACTAGATGTGTTAGGCAAA 1349
consensus_12216#1      TGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTTTATTAGATGTGTTAGGCAAA 503
consensus_12216#2      TGGTGTGGAAGCTGGTTGAAGCTGGAACCTTGCATTTTTCTACTAGATGTGTTAGGCAAA 456
                       *************************************** ** *****************

consensus_12216#0      TGTGCTATCGTATACATTCATGTAACACAAGTTAAACTTATCACCATCGAACTTGTCCAC 1409
consensus_12216#1      TGTGCTATCGTATACATTCATGTAACCCAAGTTAAACTTATCCCCATTGAACTTGTCCCC 563
consensus_12216#2      TGTGCTATCGTATACATTCATGTAACACAAGTTAAACTTATCACCATCGAACTTGTCCAC 516
                       ************************** *************** **** ********** *

consensus_12216#0      CAGTGCCCCAGCAGTAGAAGCGCATCTTATCACAATTGGTGGTAAATTTAGTGGAATGGA 1469
consensus_12216#1      CAGTGCCCCAGCAGTAGAAGGGCATTTTATCCCAATTGGTGGTAAATTTAGTGGAATGGA 623
consensus_12216#2      CAGTGCCCCAGCAGTAGAAGCGCATCTTATCACAATTGGTGGTAAATTTAGTGGAATGGA 576
                       ******************** **** ***** ****************************

consensus_12216#0      TGAACATCCACGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCATAACATTTCAGTA 1529
consensus_12216#1      TGAACATCCCCGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCGTAA---------- 673
consensus_12216#2      TGAACATCCACGCTAATGGTTGCTGAAAGCTGAAATGACAATTTGCATA----------- 625
                       ********* ************************************ **           

consensus_12216#0      TTTCTTCTCAAAAAAAAAAAAAA 1552
consensus_12216#1      -----------------------
consensus_12216#2      -----------------------