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Oryza sativa
cluster # 12231 cluster # 12231       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12231#0 length = 1002 sequences # 7  
consensus_12231#1 length = 742 sequences # 1  
consensus_12231#2 length = 446 sequences # 2  

consensusID : consensus_12231#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1002
fasta sequence
                              [CGATCGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGAGTTAGAAACTGAGGAGGAAGCAACTCGACGACACCAACCAATGGCGGAGCACGCCACGGGAGTGTACGGGCACCCGTACCCGCGCGTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCCCGGACGAGCCGGCGCCGCGCGACACGGCCGCGGGGTACGTGGCGCCGCCGGACCCCGCGGTGTCGACTGGCGACTACGGCCTCGCCGGCGCGGAGGCGCC-GCACCCGCACGAGAGCGCGGTGATGAGCGGCGCAGCCGCCGCTGCCGTCGCACCAGGAGGCGAGGCGTACACGCGCGACGGCGGCGGCGTAGTTCCCCCGGCCGGCGAGAAGACGTTCGCCTACGAGGGCACGGT-CAGCGCCGCCGGCGTCACGGGCGCCTCCGGGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCACACGACGCTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTC--CG-GC--GGCCGGG------ACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGCGCGCACGCACTTTCATCGGT-TGACGTTCGTGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTATCCAATAAT-CCAGAGTCAGATCTCTTTTAATTAAAAAAAAAAACGAGTCACGAGTGCTTTACGTTTCGCACCAA]

[+] EMBL AY333185             [CGATCGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGAGTTAGAAACTGAGGAGGAAGCAACTCGACGACACCAACCAATGGCGGAGCACGCCACGGGAGTGTACGGGCACCCGTACCCGCGCGTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCCCGGACGAGCCGGCGCCGCGCGACACGGCCGCGGGGTACGTGGCGCCGCCGGACCCCGCGGTGTCGACTGGCGACTACGGCCTCGCCGGCGCGGAGGCGCC GCACCCGCACGAGAGCGCGGTGATGAGCGGCGCAGCCGCCGCTGCCGTCGCACCAGGAGGCGAGGCGTACACGCGCGACGGCGGCGGCGTAGTTCCCCCGGCCGGCGAGAAGACGTTCGCCTACGAGGGCACGGT CAGCGCCGCCGGCGTCACGGGCGCCTCCGGGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCACACGACGCTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTC  CG GC  GGCCGGG      ACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGCGCGCACGCACTTTCATCGGT TGACGTTCGTGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTATCCAATAAT CCAGAGTCAGATCTCTTTTAATTATCCTTTATAACGAGTCACGAGTGCTTTACGTTTCGCACCAA]
[+] EMBL OSC694               [    CGCTCGTATCACTCATNGCTCAAAGAGGGTAACCGTGTTAGAAACTGAGGAGGAAGCAACTCGACGACACCAACCAATTGCGGA NACNCCACGGGAGTGTACGGGCACCCGTACCCGCGCGTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCCCGGACGAGCCGGCGCCGCG GACACGGCCGCGGGGTACGTNGCGCCG CGGACCCNGNGTGGTCGACTNGCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSRAB25              [                             AGGGTAACCGAGTTAGAAACTGAGGAGGAAGCAACTCGACGACACCAACCAATGGCGGAGCACGCCACGGGAGTGTACGGGCACCCGTACCCGCGCGTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCCCGGACGAGCCGGCGCCGCGCGACACGGCCGCGGGGTACGTGGCGCCGCCGGACCCCGCGGTGTCGACTGGCGACTACGGCCTCGCCGGCGCGGAGGCGCCGGCACCCGCACGAGAGCGCGGTGATGAGCGGCGCAGCCGGCGCTGCCGTCGCACCAGGAGGCGAGGCGTACACGCGCGACGGCGGCGGCGTAGTTCCCCCGGCCGGCGAGAAGACGTTCGCCTACGAGGGCACGGT CAGCGCCGCCGGC TCACGGGCGCCTCCGGGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCACACGACGCTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTC  CG GC  GGCCGGG      ACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGCGCGCACGCACTTTCATCGGT TGACGTTCGTGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTATC                                                                         ]
[+] EMBL C99377               [                                                                                                                                                                                                                                                                                                                                                                                                       AGACGTTCG CTACGAGGGNACGGTCCAGC CCGCCGGCGTCACGGGCGCCTCCGGGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCACACGACGCTCGGCGAGACGTTGCGCCGCTCCGGNAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTC  CG GC  GGCCGGG      ACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGA CTCGCGCGCACGCACTTTCATCGGT TGACGTTCGTGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTATCCAATAAT CCAGAGTCAGATCTCTTTTAATTATCAAAAAA                                 ]
[+] EMBL BI797985             [                                                                                                                                                                                                                                                                                                                                                                                                                                         CCCGCGTCACGGGCGCCTCC GGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCACACGACGCTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTC  CG GC  GGCCGGGACGGGAACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGCGCGCACGCACTTTCATCGGTCTGACATTCGTGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTATCCAATAAT CCCGACTCAGATCTCTTTTAATTAAAAAAAAAA                                ]
[+] EMBL BI796793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCCACCACCAGGGAGGAGGGCCACACGACGCTCGGCGAGACGTTGC CCGCTCC GCAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGT GGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTC  CGCGCCGGGACGGGA     ACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGCGCGCACGCACTTTCATCGGT TGACATTCGTGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTATCCAATAATCCCAGAGTCAGATCTCTTTTAATTTAAAAA                                    ]
[+] EMBL BI796806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTCCGCG GCCGGGACGGGA     ACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGCGCGCACGCACTTTCATCGGT TGACATTCGTGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTATCCAATAAT CCAGAGTCAGATCTCTTTTAATTAAA                                       ]


>consensus_12231#0 CGATCGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGAGTTAGAAACTGAGGAGGAAG CAACTCGACGACACCAACCAATGGCGGAGCACGCCACGGGAGTGTACGGGCACCCGTACC CGCGCGTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCC CGGACGAGCCGGCGCCGCGCGACACGGCCGCGGGGTACGTGGCGCCGCCGGACCCCGCGG TGTCGACTGGCGACTACGGCCTCGCCGGCGCGGAGGCGCCGCACCCGCACGAGAGCGCGG TGATGAGCGGCGCAGCCGCCGCTGCCGTCGCACCAGGAGGCGAGGCGTACACGCGCGACG GCGGCGGCGTAGTTCCCCCGGCCGGCGAGAAGACGTTCGCCTACGAGGGCACGGTCAGCG CCGCCGGCGTCACGGGCGCCTCCGGGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCACA CGACGCTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCGT CGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGG AGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTCCGG CGGCCGGGACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCA TCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGCG CGCACGCACTTTCATCGGTTGACGTTCGTGCAACTGTCCATGCATGTATGTATAATACCA GTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTG TACAGTGCGTCTATGCATGTACGGTGTATCCAATAATCCAGAGTCAGATCTCTTTTAATT AAAAAAAAAAACGAGTCACGAGTGCTTTACGTTTCGCACCAA



consensusID : consensus_12231#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 742
fasta sequence
                              [TCCCATCAGCTCGATCGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGAGTTAGAAACTGAGGAGGCGCCGCACCCGCACGAGAGCGCGGTGATGAGCGGCGCAGCCGCCGCTGCCGTCGCACCAGGAGGCGAGGCGTACACGCGCGACGGCGGCGGCGTAGTTCCCCCGGCCGGCGAGAAGACGTTCGCCTACGAGGGCACGGTCAGCGCCGCCGGCGTCACGGGCGCCTCCGGGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCACACGACGCTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTCCGGCGGCCGGGACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGCGCGCACGCACTTTCATCGGTTGACGTTCGTGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTATCCAATAATCCAGAGTCAGATC]

[+] EMBL AK063691             [TCCCATCAGCTCGATCGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGAGTTAGAAACTGAGGAGGCGCCGCACCCGCACGAGAGCGCGGTGATGAGCGGCGCAGCCGCCGCTGCCGTCGCACCAGGAGGCGAGGCGTACACGCGCGACGGCGGCGGCGTAGTTCCCCCGGCCGGCGAGAAGACGTTCGCCTACGAGGGCACGGTCAGCGCCGCCGGCGTCACGGGCGCCTCCGGGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCACACGACGCTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTCCGGCGGCCGGGACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGCGCGCACGCACTTTCATCGGTTGACGTTCGTGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTATCCAATAATCCAGAGTCAGATC]


>consensus_12231#1 TCCCATCAGCTCGATCGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGAGTTAGAAAC TGAGGAGGCGCCGCACCCGCACGAGAGCGCGGTGATGAGCGGCGCAGCCGCCGCTGCCGT CGCACCAGGAGGCGAGGCGTACACGCGCGACGGCGGCGGCGTAGTTCCCCCGGCCGGCGA GAAGACGTTCGCCTACGAGGGCACGGTCAGCGCCGCCGGCGTCACGGGCGCCTCCGGGCA GCTCCAGCCCACCACCAGGGAGGAGGGGCACACGACGCTCGGCGAGACGTTGCGCCGCTC CGGCAAATCCAGCTCCAGCTCCAGCTCGTCGTCGGAGGATGACGGGCAAGGTGGGCGGAG GAAGAAGAAGAGCATCAAGGAGAAGATAAAGGAGAAGCTTCCCGGCAGCCACAAGCAGGA GGAGCAGAAGCAAGCTGGCCACACGGCTCCGGCGGCCGGGACGGGGACGGGGACGGGGAC GCATGCAGCGGGGAAGCACGAGAAGAAGGGCATCGTGGAGAAGATCAAGGAGAAGCTCCC CGGCCACGGCCACCACTGAGCGAGAGCTCGCGCGCACGCACTTTCATCGGTTGACGTTCG TGCAACTGTCCATGCATGTATGTATAATACCAGTCGTGTTTCAGTTCGTTAATTTTACGG TCGATGTGTGGTCTCGGTAAAACTAGGTGGTGTACAGTGCGTCTATGCATGTACGGTGTA TCCAATAATCCAGAGTCAGATC



consensusID : consensus_12231#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 446
fasta sequence
                              [CGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGNGTTAGAAACTGAGGAGGAAGCAACTCGACGACACCAACCAATGGNGGAGACGCCACGGGAGTGTACGGGCACCCGTACCCGCGCGTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCCCGGACGAGCCGGNGCCGCGCGACACGGTNGCGGGGTACGTNGNGCCGTCGGACCCNGTGGTGTCGACTGGGCGACTTACGGCCTCGCGGCGCGGAGGCGCCCAACCCCGCACGAGAGCGCGGTTGATGAGCGGCGANACAGCTTGCCCGTTCGCACCAGGAGGCGAGGCGTTACANGCGCGACGGCGGGCGGCGTAGTTTTCCCCGGCCGGCGAGAAGACGTTNGCTTACGAGGGGANGGTTAAAGCCGCCGGTTTAAGGGCGCTTTCNGG]

[+] EMBL OSC26801             [CGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGNGTTAGAAACTGAGGAGGAAGCAACTCGACGACACCAACCAATGGNGGAGACGCCACGGGAGTGTACGGGCACCCGTACCCGCGCGTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCCCGGACGAGCCGGNGCCGCGCGACACGGTNGCGGGGTACGTNGNGCCGTCGGACCCNGTGGTGTCGACTG                                                                                                                                                                                                          ]
[+] EMBL OSC210               [      TATCACTCATGGCTCAAAGAGGGTAACCGNGTTAGAAACTGAGGAGGAAGCAACTCGACGACACCAACCAATGGCGGAGACGCCACGGGAGTGTACGGGCACCCGTACCCGCGCGTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCCCGGACGAGCCGGNGCCGCGCGACACGGANGCGGGGTACGTGGCGCCGCCGGACCCCGCGGTGTCGACTTGGCGACTTACGGCCTCGCGGCGCGGAGGCGCCCAACCCCGCACGAGAGCGCGGTTGATGAGCGGCGANACAGCTTGCCCGTTCGCACCAGGAGGCGAGGCGTTACANGCGCGACGGCGGGCGGCGTAGTTTTCCCCGGCCGGCGAGAAGACGTTNGCTTACGAGGGGANGGTTAAAGCCGCCGGTTTAAGGGCGCTTTCNGG]


>consensus_12231#2 CGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGNGTTAGAAACTGAGGAGGAAGCAAC TCGACGACACCAACCAATGGNGGAGACGCCACGGGAGTGTACGGGCACCCGTACCCGCGC GTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCCCGGAC GAGCCGGNGCCGCGCGACACGGTNGCGGGGTACGTNGNGCCGTCGGACCCNGTGGTGTCG ACTGGGCGACTTACGGCCTCGCGGCGCGGAGGCGCCCAACCCCGCACGAGAGCGCGGTTG ATGAGCGGCGANACAGCTTGCCCGTTCGCACCAGGAGGCGAGGCGTTACANGCGCGACGG CGGGCGGCGTAGTTTTCCCCGGCCGGCGAGAAGACGTTNGCTTACGAGGGGANGGTTAAA GCCGCCGGTTTAAGGGCGCTTTCNGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12231#0      CGATCGCTCGTATCACTCATGGCTCAAAGAGGGTAACCGAGTTAGAAACTGAGGAGGAAG 60
consensus_12231#1      ------------------------------------------------------------
consensus_12231#2      ------------------------------------------------------------
                                                                                   

consensus_12231#0      CAACTCGACGACACCAACCAATGGCGGAGCACGCCACGGGAGTGTACGGGCACCCGTACC 120
consensus_12231#1      ------------------------------------------------------------
consensus_12231#2      ------------------------------------------------------------
                                                                                   

consensus_12231#0      CGCGCGTCGACCAGTACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCC 180
consensus_12231#1      ------------------------------------------------------------
consensus_12231#2      ------------------------------------------------------------
                                                                                   

consensus_12231#0      CGGACGAGCCGGCGCCGCGCGACACGGCCGCGGGGTACGTGGCGCCGCCGGACCCCGCGG 240
consensus_12231#1      ---------------------TCCCATCAGCTCGATCGCTCGTATCAC------TCATGG 33
consensus_12231#2      ------------------------------------CGCTCGTATCAC------TCATGG 18
                                                              * *   * *       *  **

consensus_12231#0      TGTCGACTGGCGACTACGGCCTCGCCGGCGCGGAGGCGCCGCACCCGCACGAGAGCGCGG 300
consensus_12231#1      C-TCAAAGAGGGTAACCGAGTTAGAAACTGAGGAGGCGCCGCACCCGCACGAGAGCGCGG 92
consensus_12231#2      C-TCAAAGAGGGTAACCGNGTTAGAAACTGAGGAGGAA--GCAACTCGACGACACCA--- 72
                         ** *   * *    **   * *     * *****    *** *   **** * *    

consensus_12231#0      TGATGAGCGGCGCAGCCGCCGCTGCCGTCGCACCAGGAGGCG-AGGCGTACACGCGCGAC 359
consensus_12231#1      TGATGAGCGGCGCAGCCGCCGCTGCCGTCGCACCAGGAGGCG-AGGCGTACACGCGCGAC 151
consensus_12231#2      --ACCAATGGNGGAGACGCCACGGGAGT-GTACGGGCACCCGTACCCGCGCGTCGACCAG 129
                         *  *  ** * ** **** * *  ** * **  * *  ** *  **  *     * * 

consensus_12231#0      GGCGGCGGCGTAGTTCCCCCGGCCGGCGAGAAGACGTTCGCCTACGAGGGCACGGTCAGC 419
consensus_12231#1      GGCGGCGGCGTAGTTCCCCCGGCCGGCGAGAAGACGTTCGCCTACGAGGGCACGGTCAGC 211
consensus_12231#2      TACGGGAACCCTGTGCCGCCGGTCGACCAGTACGGCAACCCCGTCCCGGACG-AGCCGGN 188
                         ***   *   ** ** **** ** * ** *      * **  *  ** *   * * * 

consensus_12231#0      GCCGCCGGCGTCACGGGCGCCTCCGGGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCAC 479
consensus_12231#1      GCCGCCGGCGTCACGGGCGCCTCCGGGCAGCTCCAGCCCACCACCAGGGAGGAGGGGCAC 271
consensus_12231#2      GCCGC--GCGACACGGTNG---CGGGGTACGTNGNGCCGTCGGACCCNGTGGTGTCGACT 243
                       *****  *** *****  *   * *** *  *   ***  *   *   * ** *  *   

consensus_12231#0      ACGACGCTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCG 539
consensus_12231#1      ACGACGCTCGGCGAGACGTTGCGCCGCTCCGGCAAATCCAGCTCCAGCTCCAGCTCGTCG 331
consensus_12231#2      GGGCGACTTACGGCCTCGCGGCGCGGAGGCGCCCAACCCCGCACGAGAGCGCGGTTGATG 303
                         *   **    *   **  **** *   ** * ** ** ** * **  *  * * *  *

consensus_12231#0      TCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAG 599
consensus_12231#1      TCGGAGGATGACGGGCAAGGTGGGCGGAGGAAGAAGAAGAGCATCAAGGAGAAGATAAAG 391
consensus_12231#2      AGCGGCGAN-ACAGCTTGCCCGTTCGCACCAGGAGGCGAGGCGTTACANGCGCGACGGCG 362
                          *  **  ** *       *  ** *  * ** *    ** * *       **    *

consensus_12231#0      GAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTCCG 659
consensus_12231#1      GAGAAGCTTCCCGGCAGCCACAAGCAGGAGGAGCAGAAGCAAGCTGGCCACACGGCTCCG 451
consensus_12231#2      GGCGGCGTAGTTTTCCCCGGCCGGCGAGAAGA-CGTTNGCTTACGAGGGG-ANGGTTAAA 420
                       *      *      *  *  *  **  ** ** *    **   *  *    * ** *   

consensus_12231#0      GCGGCCGGGACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGC 719
consensus_12231#1      GCGGCCGGGACGGGGACGGGGACGGGGACGCATGCAGCGGGGAAGCACGAGAAGAAGGGC 511
consensus_12231#2      GCCGCCGGTTTAAGGGCGCTTTCNGG---------------------------------- 446
                       ** *****     ** **    * **                                  

consensus_12231#0      ATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGC 779
consensus_12231#1      ATCGTGGAGAAGATCAAGGAGAAGCTCCCCGGCCACGGCCACCACTGAGCGAGAGCTCGC 571
consensus_12231#2      ------------------------------------------------------------
                                                                                   

consensus_12231#0      GCGCACGCACTTTCATCGGTTGACGTTCGTGCAACTGTCCATGCATGTATGTATAATACC 839
consensus_12231#1      GCGCACGCACTTTCATCGGTTGACGTTCGTGCAACTGTCCATGCATGTATGTATAATACC 631
consensus_12231#2      ------------------------------------------------------------
                                                                                   

consensus_12231#0      AGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGT 899
consensus_12231#1      AGTCGTGTTTCAGTTCGTTAATTTTACGGTCGATGTGTGGTCTCGGTAAAACTAGGTGGT 691
consensus_12231#2      ------------------------------------------------------------
                                                                                   

consensus_12231#0      GTACAGTGCGTCTATGCATGTACGGTGTATCCAATAATCCAGAGTCAGATCTCTTTTAAT 959
consensus_12231#1      GTACAGTGCGTCTATGCATGTACGGTGTATCCAATAATCCAGAGTCAGATC--------- 742
consensus_12231#2      ------------------------------------------------------------
                                                                                   

consensus_12231#0      TAAAAAAAAAAACGAGTCACGAGTGCTTTACGTTTCGCACCAA 1002
consensus_12231#1      -------------------------------------------
consensus_12231#2      -------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)