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Oryza sativa
cluster # 12236 cluster # 12236       Sequences # 10       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12236#0 length = 1795 sequences # 10  
consensusID : consensus_12236#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1795
fasta sequence 
                              [GCACATTCGCACTCGTCTCGTCTTACTCACCCCGCACGTTTCCACTTCCCCTCTCCCCCACCTCACCAACACTCCTCGCCGTCCCACCAAACCCTACTAACCGCCGCGCGCGAGAGGGTCCCATCCCCGACTTCGCCGCCATGGCCGGCGCTCCCCCGACGGAGGCGGAGAAGGAGTCCCTCGTCACCTCCTTCCTCGAGATCGCCGCCGGCCAGACGCCCGAGACGGCCACCCAGTTCCTCCAGATGACGAGCTGGCATCTGGAGGAGGCGTTGCAGCTGTTCTACATCGACGGCGAGGCCGCCCTTGCGGCGCATCCGGCCCCATCGCCGGCTGCTGCGGCGGAAGCGGCGGCGGCGGCGGTGGCAGCAGCTGCTGAGGTGGAGGACGCGATGAGGTTCGCTCCGCCCCCAGCTGCTGCACTGGGTGATGGAATGCTGCAGGGACTTGGGGAGGAAGAGGATGTGCGGGCACCGCTGCCCACAAAGCGGGAGACTCTCTACGGCGATGCCCCCATGGTCGTCGTTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCTGAACTATCCTCCTCTCCCTGAAGAACCCAAAGGAAGTCGGGAGCTTTTGTGCAGAGTTGCAATTCGCCTACCTGATGGTA-GGAGGATCCAGAGGAATTTCCTTCACACGGATCCTATTAAGCTCCTGTGGTCATTCTGCTATCCTCAAGTGGAGGACGGG-GATAAGAAGGCTTTCCATTTCGTACAGCCCATTCCTAGGGCATCCACAAACCTGGAGTACGAGAGTGATAAAACTTTCAAAGAAGCCGGGTTGGCCAACTCGATGATCAACCTTTTGTGGGACTAAAAGCCTATTTTATCAACTCATGTTATTTCTTTATTGGCTCCAAGTCAAGATTATCGAGTGATTTTCTGTGAGGGTTCATAATTGCTTCTCTTATTTTTCTTTTTCCCTCCTGGTGCTTGGAGCCAAATGACGAATCTGGTTTCTTTGGTGTGGAAATGCCCATATTCCTTTTGTAGTGGTTCCTAGTATGTTTATAGAACTCTTGAGTAGGTTTACTCCAGTTCTCTTTTAATGCATATAATATTATTATACCTGAACAGATGCTGATAAAATCT]

[+] EMBL AK073170             [GCACATTCGCACTCGTCTCGTCTTACTCACCCCGCACGTTTCCACTTCCCCTCTCCCCCACCTCACCAACACTCCTCGCCGTCCCACCAAACCCTACTAACCGCCGCGCGCGAGAGGGTCCCATCCCCGACTTCGCCGCCATGGCCGGCGCTCCCCCGACGGAGGCGGAGAAGGAGTCCCTCGTCACCTCCTTCCTCGAGATCGCCGCCGGCCAGACGCCCGAGACGGCCACCCAGTTCCTCCAGATGACGAGCTGGCATCTGGAGGAGGCGTTGCAGCTGTTCTACATCGACGGCGAGGCCGCCCTTGCGGCGCATCCGGCCCCATCGCCGGCTGCTGCGGCGGAAGCGGCGGCGGCGGCGGTGGCAGCAGCTGCTGAGGTGGAGGACGCGATGAGGTTCGCTCCGCCCCCAGCTGCTGCACTGGGTGATGGAATGCTGCAGGGACTTGGGGAGGAAGAGGATGTGCGGGCACCGCTGCCCACAAAGCGGGAGACTCTCTACGGCGATGCCCCCATGGTCGTCGTTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCTGAACTATCCTCCTCTCCCTGAAGAACCCAAAGGAAGTCGGGAGCTTTTGTGCAGAGTTGCAATTCGCCTACCTGATGGTA GGAGGATCCAGAGGAATTTCCTTCACACGGATCCTATTAAGCTCCTGTGGTCATTCTGCTATCCTCAAGTGGAGGACGGG GATAAGAAGGCTTTCCATTTCGTACAGCCCATTCCTAGGGCATCCACAAACCTGGAGTACGAGAGTGATAAAACTTTCAAAGAAGCCGGGTTGGCCAACTCGATGATCAACCTTTTGTGGGACTAAAAGCCTATTTTATCAACTCATGTTATTTCTTTATTGGCTCCAAGTCAAGATTATCGAGTGATTTTCTGTGAGGGTTCATAATTGCTTCTCTTATTTTTCTTTTTCCCTCCTGGTGCTTGGAGCCAAATGACGAATCTGGTTTCTTTGGTGTGGAAATGCCCATATTCCTTTTGTAGTGGTTCCTAGTATGTTTATAGAACTCTTGAGTAGGTTTACTCAAGTTCTCTTTTAATGCATATAATATTATTATACCTGAACAGATGCTGATAAAATCT]
[+] EMBL C27202               [                 TCGTCTTACTCACCCCGNACGTTTCCACTTCCCCTCTCCCCCACCTCACCAACACTCCTCGCCGTCCCACCAAACCCTACTAACCGNCGCGCGCGAGAGGGTCCCATCCCCGACTTCGCCGNCATNGCCGNCGNTCCCCCGACGGAGGCGGAGAAGGAGTCCCTCGTCACCTCCTTCCTCGAGATCGNCGTCGGNCAGACGCCCGAGACGGCCACCCAGTTCCTCCAGATGACGAGNTGGCATCTGGAGGAGGCGTTGNAGCTGTTCTACATCGACGGCGAGGCCGCCCTTGCGc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AA750111             [                                                CCCTCTCCCCCACCTCACCAACACTCCTCGCCGTCCCACCAAACCCTACTAACCGCCGCG GCGAGAGGGTCCCATCCCCGACTTCGCCGCCATGGCCGG GCTCCCCCGACGGAGGC GAGAAGGCTTTCCTCGT ACCTCCTTCCT GAGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF326572             [                                                                                                                                                                        AGAAGGAGTCCCTCGTCACCTCCTTCCTCGAGATCGCCGCCGGCCAGACGCCCGAGACGGCCACCCAGTTCCTCCAGATGACGAGCTGGCATCTGGAGGAGGCGTTGCAGCTGTTCTACATCGACGGCGAGGCCGCCCTTGCGGCGCATCCGGCCCCATCGCCGGCTGCTGCGGCGGAAGCGGCGGCCGCGGCGGTGGCAGCAGCTGCTGAGGTGGAGGACGCGATGAGGTTCGCTCCGCCCCCAGCTGCTGCACTGGGTGATGGAATGCTGCAGGGACTTGGGGAGGAAGAGGATGTGCGGGCACCGCTGCCCACAAAGCGGGAGACTCTCTACGGCGATGCCCCCATGGTCGTCGTTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCG CAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BP185013             [                                                                                                                                                                                                                                                                                                                                                                           acgagGCAGCTGCTGAGGTGGAGGACGCGATGAGGTTCGCTCCGCCCCCAGCTGCTGCACTGGGTGATGGAATGCTGCAGGGACTTGGGGAGGAAGAGGATGTGCGGGCACCGCTGCCCACAAAGCGGGAGACTCTCTACGGCGATGCCCCCATGGTCGTCGTTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK072097             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCGGCCTAATTCAACAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGCAGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCTGAACTATCCTCCTCTCCCTGAAGAACCCAAAGGAAGTCGGGAGCTTTTGTGCAGAGTTGCAATTCGCCTACCTGATGGTA GGAGGATCCAGAGGAATTTCCTTCACACGGATCCTATTAAGCTCCTGTGGTCATTCTGCTATCCTCAAGTGGGGGACGGG GATAAGAAGGCTTTCCATTTCGTACAGCCCATTCCTAGGGCATCCACAAACCTGGAGTACGAGAGTGATAAAACTTTCAAAGAAGCCGGGTTGGCCAACTCGATGATCAACCTTTTGTGGGACTAAAAGCCTATTTTATCAACTCATGTTATTTCTTTATTGGCTCCAAGTCAAGATTATCGAGTGATTTTCTGTGAGGGTTCATAATTGCTTCTCTTATTTTTCTTTTTCCCTCCTGGTGCTTGGAGCCAAATGACGAATCTGGTTTCTTTGGTGTGGAAATGCCCATATTCCTTTTGTAGTGGTTCCTAGTATGTTTATAGAACTCTTGAGTAGGTTTACTCCAGTTCTCTTTTAATGCATATAATATT                              ]
[+] EMBL CF324455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GATAATCTGGCGGCATTGTATCGTCCACCATTTGCTTTGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGCTCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTTGGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACCATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCATTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF322767             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACCCGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCTGAACTATCCTCCTCTCCCTGAAGAACCCAAAGGAAGTCGGGAGCTTTTGTGCAGAGTTGCAATTCGCCTACCTGATGGTAGGGAGGATCCAGAGGAATTTCCTTCACACGGATCCTATTAAGCTCCTGTGGTCATTCTGCTATCCTCAAGTGGAGGACGGGNGATAAGAAGGCTTTCCATTTCGTACAGCCCATTCCTAGGGCATCCACAAACCTGGAGTACGAGA                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BE230695             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                cgtgCCGAATTCTGCACGA GTAAAGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATGCAACTCAACCTCAAAAACGGCCAAGAAAAGTTGATCA  AAACTTCTATCGGCAAACAAGGTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAGTAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTGAGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL AU225367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgcTTTTTTTTTCCCTCCTGGTGCTTGGAGCCAAATGACGAATCTGGTTTCTTTGGTGTGGAAATGCCCATATTCCTTTTGTAGTGGTTCCTAGTATGTTTATAGAACTCTTGAGTAGGTTTACTCCAGTTCTCTTTTAATGCATATAATATTATTATACCTGAACAGATGCTGATAAgcggc]




>consensus_12236#0
GCACATTCGCACTCGTCTCGTCTTACTCACCCCGCACGTTTCCACTTCCCCTCTCCCCCA
CCTCACCAACACTCCTCGCCGTCCCACCAAACCCTACTAACCGCCGCGCGCGAGAGGGTC
CCATCCCCGACTTCGCCGCCATGGCCGGCGCTCCCCCGACGGAGGCGGAGAAGGAGTCCC
TCGTCACCTCCTTCCTCGAGATCGCCGCCGGCCAGACGCCCGAGACGGCCACCCAGTTCC
TCCAGATGACGAGCTGGCATCTGGAGGAGGCGTTGCAGCTGTTCTACATCGACGGCGAGG
CCGCCCTTGCGGCGCATCCGGCCCCATCGCCGGCTGCTGCGGCGGAAGCGGCGGCGGCGG
CGGTGGCAGCAGCTGCTGAGGTGGAGGACGCGATGAGGTTCGCTCCGCCCCCAGCTGCTG
CACTGGGTGATGGAATGCTGCAGGGACTTGGGGAGGAAGAGGATGTGCGGGCACCGCTGC
CCACAAAGCGGGAGACTCTCTACGGCGATGCCCCCATGGTCGTCGTTCGGCCTAATTCAA
CAGTTGCATTTCGTAACTTTGAAGAGGAGTCAAGGCAATCTGCTGTTTGGGATTCTGAGC
AGAATGCTGCATCTAGTTCTCGTGATAATCTGGCGGCATTGTATCGTCCACCATTTGCTT
TGATGTTCAATGGACCCTTCGACAAGGCAAAGTTAGAGGCTTCTGTTCTGGACAAGTGGC
TCTTGATCAATTTGCAATCGACTGAAGAGTTCAGCTCTCACATGCTTAATCGGGACACTT
GGGCTAATGAGGCTGTGGCTCAGACAATTCGATCGAACTTTATTTTCTGGCAGGTTTACC
ATGACACCAGTGAGGGGAGGAAGGTATGCACCTACTACAATTTGGTCTCTGTTCCTGCCA
TTCTTCTGATTGACCCTATCACTGGGCAAAAAATGCGTGGGTGGAATGGAATGATTCACC
CGGACCGTTTGCTGGAGGATTTGATGCCTTACCTGGACAAAGGTCCAAAGGAGCACCATG
CAGCTCAACCTCAAAAACGGCCAAGAAAAGTTGATCAGGAAACTTCTATCGGCAAACAAG
GTAAAACCCCTGTACCCGTAGTAGCCACAGAGGATGAAGACGAAGAACTAGCACGGGCAG
TAGCGGCTTCTCTTGAGGAGAGTAAAGGCTCTGACACTAGTGAGGAAAAGATTGAACCTG
AGGTAGAAAATGAGCCTAGCCTGAGTGCTAAGCTGAACTATCCTCCTCTCCCTGAAGAAC
CCAAAGGAAGTCGGGAGCTTTTGTGCAGAGTTGCAATTCGCCTACCTGATGGTAGGAGGA
TCCAGAGGAATTTCCTTCACACGGATCCTATTAAGCTCCTGTGGTCATTCTGCTATCCTC
AAGTGGAGGACGGGGATAAGAAGGCTTTCCATTTCGTACAGCCCATTCCTAGGGCATCCA
CAAACCTGGAGTACGAGAGTGATAAAACTTTCAAAGAAGCCGGGTTGGCCAACTCGATGA
TCAACCTTTTGTGGGACTAAAAGCCTATTTTATCAACTCATGTTATTTCTTTATTGGCTC
CAAGTCAAGATTATCGAGTGATTTTCTGTGAGGGTTCATAATTGCTTCTCTTATTTTTCT
TTTTCCCTCCTGGTGCTTGGAGCCAAATGACGAATCTGGTTTCTTTGGTGTGGAAATGCC
CATATTCCTTTTGTAGTGGTTCCTAGTATGTTTATAGAACTCTTGAGTAGGTTTACTCCA
GTTCTCTTTTAATGCATATAATATTATTATACCTGAACAGATGCTGATAAAATCT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)