cluster # 12240

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Oryza sativa
cluster # 12240 cluster # 12240 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12240#0 length = 1563 sequences # 8

consensus_12240#1 length = 1139 sequences # 2

consensusID : consensus_12240#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1563
fasta sequence

                              [TGCGCGCGTGCGTGTGCAACGGCGGCCCAAGGCGCGAACGCGAACGCCTCAATCTTTCCACTTCGTTCCACCTCTCCTCCGTGCAAAATCCCCAGCGCGCACGCCTCGTCCCCCTACGTGCCGCGGGCGTGGTTGCACGTCGTACGTACGCAGGCGTCCTCGCGAGGGCGCGCACGCAGGTGCGAGCTCGTGGCGGGTGACGAAGCGGTGAAGGCAAGGCATCGCGGCGGCTGTTTGATCCGGGGCCTCTTTTTGCTCCCCGTGATCAGGTATTCGGGTGCTATACTTAGGTCTGGCAAAAGTCAGCCGGGCCGCGCGCGGTTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGTGATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGGTAAATGAAGATATGGATGACGCCAGATAGTGAAGGTTATGGCAAATGCATTGAACGCCCGAAGAAACATGACAGAATGAACAGTGCAACAGCTGGTTATATAATTGTTAATGCCAATGGTGGATTGAACCAGATGAGACTGGGAATAAGCGACATGGTTGCAGTTGCTAAGCTCATGAATGCAACACTAGTAATCCCTACTCTGGATCACAAATCATTTTGGACTGATCCAAGTGATTTCAAAGATATATTTGATGTGGAACACTTCAAGAAAACTTTAGAGGGTGACATTTCGATTGTGGATTCCTTGCCACTAGCTTATAAAGGATTGAAACTTTATATGAGAGCACCCACTTCTTGGGCCAAGGTATGGACCAATCACTCAAGTGGGCATCAAAGTTATTTAGAAAAAGACATAATATACTGCAGTCGAAGAGTTATGAACTGCTAGTTACTTTTCTGCAGGCTTCTTACTACAGAGCTTTCTCAAGGACACTGAAGAAGGCCAAAGTTGTGAAATTCACACATACAGATTCACGAATTGTTAACAATGGTCTTCCCCCATCCATCCAACGACTCCGTTGTCGGGCAAATTATGAGGCACTAAGATTCCACAAAGAAATTGAAGAGCTGAGTACTGCTCTAGTAGATAGACTGAGGAATGGATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTACTGGTTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAACGT]

[+] EMBL AK100337             [TGCGCGCGTGCGTGTGCAACGGCGGCCCAAGGCGCAAACGCGAACGCCTCAATCTTTCCACTTCGTTCCACCTCTCCTCCGTGCAAAATCCCCAGCGCGCACGCCTCGTCCCCCTACGTGCCGCGGGCGTGGTTGCACGTCGTACGTACGCAGGCGTCCTCGCGAGGGCGCGCACGCAGGTGCGAGCTCGTGGCGGGTGACGAAGCGGTGAAGGCAAGGCATCGCGGCGGCTGTTTGATCCGGGGCCTCTTTTTGCTCCCCGTGATCAGGTATTCGGGTGCTATACTTAGGTCTGGCAAAAGTCAGCCGGGCCGCGCGCGGTTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGTGATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCG    ATGAAGATATGGATGACGCCAGATAGTGAAGGTTATGGCAAATGCATTGAACGCCCGAAGAAACATGACAGAATGAACAGTGCAACAGCTGGTTATATAATTGTTAATGCCAATGGTGGATTGAACCAGATGAGACTGGGAATAAGCGACATGGTTGCAGTTGCTAAGCTCATGAATGCAACACTAGTAATCCCTACTCTGGATCACAAATCATTTTGGACTGATCCAAGTGATTTCAAAGATATATTTGATGTGGAACACTTCAAGAAAACTTTAGAGGGTGACATTTCGATTGTGGATTCCTTGCCACTAGCTTATAAAGGATTGAAACTTTATATGAGAGCACCCACTTCTTGGGCCAAGGTATGGACCAATCACTCAAGTGGGCATCAAAGTTATTTAGAAAAAGACATAATATACTGCAGTCGAAGAGTTATGAACTGCTAGTTACTTTTCTGCAGGCTTCTTACTACAGAGCTTTCTCAAGGACACTGAAGAAGGCCAAAGTTGTGAAATTCACACATACAGATTCACGAATTGTTAACAATGGTCTTCCCCCATCCATCCAACGACTCCGTTGTCGGGCAAATTATGAGGCACTAAGATTCCACAAAGAAATTGAAGAGCTGAGTACTGCTCTAGTAGATAGACTGAGGAATGGATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTACTGGTTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAACG ]
[+] EMBL CB626964             [            TGTGCAACGGCGGCCCAAGGCGCGAACGCGAACGCCTCAATCTTTCCACTTCGTTCCACCTCTCCTCCGTGCAAAATCCCCAGCGCGCACGCCTCGTCCCCCTACGTGCCGCGGGCGTGGTTGCACGTCGTACGTACGCAGGCGTCCTCGCGAGGGCGCGCACGCAGGTGCGAGCTCGTGGCGGGTGACGAAGCGGTGAAGGCAAGGCATCGCGGCGGCTGTTTGATCCGGGGCCTCTTTTTGCTCCCCGTGATCAGGTATTCGGGTGCTATACTTAGGTCTGGCAAAAGTCAGCCGGGCCGCGCGCGGTTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGTGATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGATGAAg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB626983             [            TGTGCAACGGCGGCCCAAGGCGCGAACGCGAACGCCTCAATCTTTCCACTTCGTTCCACCTCTCCTCCGTGCAAAATCCCCAGCGCGCACGCCTCGTCCCCCTACGTGCCGCGGGCGTGGTTGCACGTCGTACGTACGCAGGCGTCCTCGCGAGGGCGCGCACGCAGGTGCGAGCTCGTGGCGGGTGACGAAGCGGTGAAGGCAAGGCATCGCGGCGGCTGTTTGATCCGGGGCCTCTTTTTGCTCCCCGTGATCAGGTATTCGGGTGCTATACTTAGGTCTGGCAAAAGTCAGCCGGGCCGCGCGCGGTTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB622928             [                      CGGCCCACCGCGCGAACGCGAACGCCTCAATCTTTCCACTTCGTTCCACCTCTCCTCCGTGCAAAATCCCCAGCGCGCACGCCTCGTCCCCCTACGTGCCGCGGGCGTGGTTGCACGTCGTACGTACGCAGGCGTCCTCGCGAGGGCGCGCACGCAGGTGCGAGCTCGTGGCGGGTGACGAAGCGGTGAAGGCAAGGCATCGCGGCGGCTGTTTGATCCGGGGCCTCTTTTTGCTCCCCGTGATCAGGTATTCGGGTGCTATACTTAGGTCTGGCAAAAGTCAGCCGGGCCGCGCGCGGTTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCTGTGACGGCGAAGTGATGGGCTGGACGGACGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGGTAAATGAA ATATGGATGACGCCAGATAGTGAAGGTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB622926             [                      CGGCCCAACGCGCGAACGCGAACGCCTCAATCTTTCCACTTCGTTCCACCTCTCCTCCGTGCAAAATCCCCAGCGCGCACGCCTCGTCCCCCTACGTGCCGCGGGCGTGGTTGCACGTCGTACGTACGCAGGCGTCCTCGCGAGGGCGCGCACGCAGGTGCGAGCTCGTGGCGGGTGACGAAGCGGTGAAGGCAAGGCATCGCGGCGGCTGTTTGATCCGGGGCCTCTTTTTGCTCCCCGTGATCAGGTATTCGGGTGCTATACTTAGGTCTGGCAAAAGTCAGCCGGGCCGCGCGCGGTTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGTGATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGGTAAATGAAGATATGGATGACGCCAGATAGTGAAGGTTATGGCAAATGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB622897             [                      CGGCCCACGGCGCGAACGCGAACGCCTCAATCTTTCCACTTCGTTCCACCTCTCCTCCGTGCAAAATCCCCAGCGCGCACGCCTCGTCCCCCTACGTGCCGCGGGCGTGGTTGCACGTCGTACGTACGCAGGCGTCCTCGCGAGGGCGCGCACGCAGGTGCGAGCTCGTGGCGGGTGACGAAGCGGTGAAGGCAAGGCATCGCGGCGGCTGTTTGATCCGGGGCCTCTTTTTGCTCCCCGTGATCAGGTATTCGGGTGCTATACTTAGGTCTGGCAAAAGTCAGCCGGGCCGCGCGCGGTTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGTGATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGGTAAATGAAGATATGGATGACGCCAGATAGTGAAGGTTATGGCAAATGCATTGAACGCCCGAAGATACATGACAGAATGAACAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB622927             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGAGGAATGGATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTACTGGTTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAACGT]
[-] EMBL CB622898             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGAGGAATGGATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTACTGGTTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAACGT]




>consensus_12240#0
TGCGCGCGTGCGTGTGCAACGGCGGCCCAAGGCGCGAACGCGAACGCCTCAATCTTTCCA
CTTCGTTCCACCTCTCCTCCGTGCAAAATCCCCAGCGCGCACGCCTCGTCCCCCTACGTG
CCGCGGGCGTGGTTGCACGTCGTACGTACGCAGGCGTCCTCGCGAGGGCGCGCACGCAGG
TGCGAGCTCGTGGCGGGTGACGAAGCGGTGAAGGCAAGGCATCGCGGCGGCTGTTTGATC
CGGGGCCTCTTTTTGCTCCCCGTGATCAGGTATTCGGGTGCTATACTTAGGTCTGGCAAA
AGTCAGCCGGGCCGCGCGCGGTTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTC
GTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGA
GCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGA
CGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTT
CTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAA
CGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCG
AGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGT
GATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGGT
AAATGAAGATATGGATGACGCCAGATAGTGAAGGTTATGGCAAATGCATTGAACGCCCGA
AGAAACATGACAGAATGAACAGTGCAACAGCTGGTTATATAATTGTTAATGCCAATGGTG
GATTGAACCAGATGAGACTGGGAATAAGCGACATGGTTGCAGTTGCTAAGCTCATGAATG
CAACACTAGTAATCCCTACTCTGGATCACAAATCATTTTGGACTGATCCAAGTGATTTCA
AAGATATATTTGATGTGGAACACTTCAAGAAAACTTTAGAGGGTGACATTTCGATTGTGG
ATTCCTTGCCACTAGCTTATAAAGGATTGAAACTTTATATGAGAGCACCCACTTCTTGGG
CCAAGGTATGGACCAATCACTCAAGTGGGCATCAAAGTTATTTAGAAAAAGACATAATAT
ACTGCAGTCGAAGAGTTATGAACTGCTAGTTACTTTTCTGCAGGCTTCTTACTACAGAGC
TTTCTCAAGGACACTGAAGAAGGCCAAAGTTGTGAAATTCACACATACAGATTCACGAAT
TGTTAACAATGGTCTTCCCCCATCCATCCAACGACTCCGTTGTCGGGCAAATTATGAGGC
ACTAAGATTCCACAAAGAAATTGAAGAGCTGAGTACTGCTCTAGTAGATAGACTGAGGAA
TGGATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTAC
TGGTTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAA
CGT

consensusID : consensus_12240#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1139
fasta sequence

                              [TTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGTGATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGATGAAGATATGGATGACGCCAGATAGTGAAGGTTATGGCAAATGCATTGAACGCCCGAAGAAACATGACAGAATGAACAGTGCAACAGCTGGTTATATAATTGTTAATGCCAATGGTGGATTGAACCAGATGAGACTGGGAATAAGCGACATGGTTGCAGTTGCTAAGCTCATGAATGCAACACTAGTAATCCCTACTCTGGATCACAAATCATTTTGGACTGATCCAAGTGATTTCAAAGATATATTTGATGTGGAACACTTCAAGAAAACTTTAGAGGGTGACATTTCGATTGTGGATTCCTTGCCACTAGCTTATAAAGGATTGAAACTTTATATGAGAGCACCCACTTCTTGGGCCAAGGCTTCTTACTACAGAGCTTTCTCAAGGACACTGAAGAAGGCCAAAGTTGTGAAATTCACACATACAGATTCACGAATTGTTAACAATGGTCTTCCCCCATCCATCCAACGACTCCGTTGTCGGGCAAATTATGAGGCACTAAGATTCCACAAAGAAATTGAA-GAGCTGAGTACTGCTCTAGTAGATAGACTGAGGAATGGATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTACTGGTTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAACG]

[+] EMBL AK071217             [TTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGTGATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGATGAAGATATGGATGACGCCAGATAGTGAAGGTTATGGCAAATGCATTGAACGCCCGAAGAAACATGACAGAATGAACAGTGCAACAGCTGGTTATATAATTGTTAATGCCAATGGTGGATTGAACCAGATGAGACTGGGAATAAGCGACATGGTTGCAGTTGCTAAGCTCATGAATGCAACACTAGTAATCCCTACTCTGGATCACAAATCATTTTGGACTGATCCAAGTGATTTCAAAGATATATTTGATGTGGAACACTTCAAGAAAACTTTAGAGGGTGACATTTCGATTGTGGATTCCTTGCCACTAGCTTATAAAGGATTGAAACTTTATATGAGAGCACCCACTTCTTGGGCCAAGGCTTCTTACTACAGAGCTTTCTCAAGGACACTGAAGAAGGCCAAAGTTGTGAAATTCACACATACAGATTCACGAATTGTTAACAATGGTCTTCCCCCATCCATCCAACGACTCCGTTGTCGGGCAAATTATGAGGCACTAAGATTCCACAAAGAAATTGAA GAGCTGAGTACTGCTCTAGTAGATAGACTGAGGAATGGATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTACTGGTTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAACG]
[+] EMBL C26431               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGATCCAAGTGATTTCAAAGATATATTTGATGTGGAACACTTCAAGAAAACTTTAGAGGGTGACATTTCGATTGTGGATTCCTTGCCACTAGCTTATAAAGGATTGAAACTTTATATGAGAGCACCCACTTCTTGGGCCAAGGCTTCTTACTACAGAGCTTTCTCAAGGACACTGAAGAAGGCCAAAGTTGTGAAATTCACACATACAGATTCACGAATTGTTAACAATGGTCTTCCCCCATCCATCCAACGACTCCGTTGTCGGGCAAATTATGAGGCACTAAGATTCCACAAAGAAATTGAAGGAGCTGAGTACTGCTCTAGTAGATAGACTGAGGAATGGATCCAATCATTATATCGCACTTCACTTANGGTATGAGAGGGACATGCTCTCA TTACTNGTTGCAG CACAACCT ACACAT AAGNGGCAGATGAGCTGNGAGA              ]




>consensus_12240#1
TTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTCGTCGTCGTCGTCCAGCCCCGT
CCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGAGCGAGACGCGTTCGACTACGG
CGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGACGGCGGCGGCGGAGTGCGCCG
CGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTTCTCGTCGGCCAGGAGGAGCAA
GAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAACGTGGTCGCGTGCCTGCTCGG
CCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCGAGTGAGCGGCGCCGGCGGCGG
GAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGTGATGGGCTGGACGGAGGAGAA
CTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGATGAAGATATGGATGACGCCAGA
TAGTGAAGGTTATGGCAAATGCATTGAACGCCCGAAGAAACATGACAGAATGAACAGTGC
AACAGCTGGTTATATAATTGTTAATGCCAATGGTGGATTGAACCAGATGAGACTGGGAAT
AAGCGACATGGTTGCAGTTGCTAAGCTCATGAATGCAACACTAGTAATCCCTACTCTGGA
TCACAAATCATTTTGGACTGATCCAAGTGATTTCAAAGATATATTTGATGTGGAACACTT
CAAGAAAACTTTAGAGGGTGACATTTCGATTGTGGATTCCTTGCCACTAGCTTATAAAGG
ATTGAAACTTTATATGAGAGCACCCACTTCTTGGGCCAAGGCTTCTTACTACAGAGCTTT
CTCAAGGACACTGAAGAAGGCCAAAGTTGTGAAATTCACACATACAGATTCACGAATTGT
TAACAATGGTCTTCCCCCATCCATCCAACGACTCCGTTGTCGGGCAAATTATGAGGCACT
AAGATTCCACAAAGAAATTGAAGAGCTGAGTACTGCTCTAGTAGATAGACTGAGGAATGG
ATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTACTGG
TTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12240#0      TGCGCGCGTGCGTGTGCAACGGCGGCCCAAGGCGCGAACGCGAACGCCTCAATCTTTCCA 60
consensus_12240#1      ------------------------------------------------------------
                                                                                   

consensus_12240#0      CTTCGTTCCACCTCTCCTCCGTGCAAAATCCCCAGCGCGCACGCCTCGTCCCCCTACGTG 120
consensus_12240#1      ------------------------------------------------------------
                                                                                   

consensus_12240#0      CCGCGGGCGTGGTTGCACGTCGTACGTACGCAGGCGTCCTCGCGAGGGCGCGCACGCAGG 180
consensus_12240#1      ------------------------------------------------------------
                                                                                   

consensus_12240#0      TGCGAGCTCGTGGCGGGTGACGAAGCGGTGAAGGCAAGGCATCGCGGCGGCTGTTTGATC 240
consensus_12240#1      ------------------------------------------------------------
                                                                                   

consensus_12240#0      CGGGGCCTCTTTTTGCTCCCCGTGATCAGGTATTCGGGTGCTATACTTAGGTCTGGCAAA 300
consensus_12240#1      ------------------------------------------------------------
                                                                                   

consensus_12240#0      AGTCAGCCGGGCCGCGCGCGGTTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTC 360
consensus_12240#1      ---------------------TTTGGCCATGGCTGCGGCGCCGCCGTCCGTGGCGTCGTC 39
                                            ***************************************

consensus_12240#0      GTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGA 420
consensus_12240#1      GTCGTCGTCGTCCAGCCCCGTCCTGTCGGCCGCGCACCGCCGCCGGCTCAACGACGTCGA 99
                       ************************************************************

consensus_12240#0      GCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGA 480
consensus_12240#1      GCGAGACGCGTTCGACTACGGCGGCCCGTGCGACGTCGACGTCGATCATGATGACGACGA 159
                       ************************************************************

consensus_12240#0      CGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTT 540
consensus_12240#1      CGGCGGCGGCGGAGTGCGCCGCGGGCACGGCGCCGGCGTGGCGGGTGTCAGGGCGCTGTT 219
                       ************************************************************

consensus_12240#0      CTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAA 600
consensus_12240#1      CTCGTCGGCCAGGAGGAGCAAGAGGGCGTCCGTGATTATCGATCAGGCATGGCTGCGGAA 279
                       ************************************************************

consensus_12240#0      CGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCG 660
consensus_12240#1      CGTGGTCGCGTGCCTGCTCGGCCTCACCGTCGTCGCCGGGCTCGTGCTGAGCTCGCACCG 339
                       ************************************************************

consensus_12240#0      AGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGT 720
consensus_12240#1      AGTGAGCGGCGCCGGCGGCGGGAGGCTCGTGCAGAGGATGGACCTCGGTGACGGCGAAGT 399
                       ************************************************************

consensus_12240#0      GATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCGGT 780
consensus_12240#1      GATGGGCTGGACGGAGGAGAACTTGACGGCTGTTGCTCGCCAGTCACCTGACACGCCG-- 457
                       **********************************************************  

consensus_12240#0      AAATGAAGATATGGATGACGCCAGATAGTGAAGGTTATGGCAAATGCATTGAACGCCCGA 840
consensus_12240#1      --ATGAAGATATGGATGACGCCAGATAGTGAAGGTTATGGCAAATGCATTGAACGCCCGA 515
                         **********************************************************

consensus_12240#0      AGAAACATGACAGAATGAACAGTGCAACAGCTGGTTATATAATTGTTAATGCCAATGGTG 900
consensus_12240#1      AGAAACATGACAGAATGAACAGTGCAACAGCTGGTTATATAATTGTTAATGCCAATGGTG 575
                       ************************************************************

consensus_12240#0      GATTGAACCAGATGAGACTGGGAATAAGCGACATGGTTGCAGTTGCTAAGCTCATGAATG 960
consensus_12240#1      GATTGAACCAGATGAGACTGGGAATAAGCGACATGGTTGCAGTTGCTAAGCTCATGAATG 635
                       ************************************************************

consensus_12240#0      CAACACTAGTAATCCCTACTCTGGATCACAAATCATTTTGGACTGATCCAAGTGATTTCA 1020
consensus_12240#1      CAACACTAGTAATCCCTACTCTGGATCACAAATCATTTTGGACTGATCCAAGTGATTTCA 695
                       ************************************************************

consensus_12240#0      AAGATATATTTGATGTGGAACACTTCAAGAAAACTTTAGAGGGTGACATTTCGATTGTGG 1080
consensus_12240#1      AAGATATATTTGATGTGGAACACTTCAAGAAAACTTTAGAGGGTGACATTTCGATTGTGG 755
                       ************************************************************

consensus_12240#0      ATTCCTTGCCACTAGCTTATAAAGGATTGAAACTTTATATGAGAGCACCCACTTCTTGGG 1140
consensus_12240#1      ATTCCTTGCCACTAGCTTATAAAGGATTGAAACTTTATATGAGAGCACCCACTTCTTGGG 815
                       ************************************************************

consensus_12240#0      CCAAGGTATGGACCAATCACTCAAGTGGGCATCAAAGTTATTTAGAAAAAGACATAATAT 1200
consensus_12240#1      CCAAGG------------------------------------------------------ 821
                       ******                                                      

consensus_12240#0      ACTGCAGTCGAAGAGTTATGAACTGCTAGTTACTTTTCTGCAGGCTTCTTACTACAGAGC 1260
consensus_12240#1      --------------------------------------------CTTCTTACTACAGAGC 837
                                                                   ****************

consensus_12240#0      TTTCTCAAGGACACTGAAGAAGGCCAAAGTTGTGAAATTCACACATACAGATTCACGAAT 1320
consensus_12240#1      TTTCTCAAGGACACTGAAGAAGGCCAAAGTTGTGAAATTCACACATACAGATTCACGAAT 897
                       ************************************************************

consensus_12240#0      TGTTAACAATGGTCTTCCCCCATCCATCCAACGACTCCGTTGTCGGGCAAATTATGAGGC 1380
consensus_12240#1      TGTTAACAATGGTCTTCCCCCATCCATCCAACGACTCCGTTGTCGGGCAAATTATGAGGC 957
                       ************************************************************

consensus_12240#0      ACTAAGATTCCACAAAGAAATTGAAGAGCTGAGTACTGCTCTAGTAGATAGACTGAGGAA 1440
consensus_12240#1      ACTAAGATTCCACAAAGAAATTGAAGAGCTGAGTACTGCTCTAGTAGATAGACTGAGGAA 1017
                       ************************************************************

consensus_12240#0      TGGATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTAC 1500
consensus_12240#1      TGGATCCAATCATTATATCGCACTTCACTTAAGGTATGAGAAGGACATGCTCTCATTTAC 1077
                       ************************************************************

consensus_12240#0      TGGTTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAA 1560
consensus_12240#1      TGGTTGCAGCCACAACCTAACACATAAAGAGGCAGATGAGCTGAGAGAAATGAGACTCAA 1137
                       ************************************************************

consensus_12240#0      CGT 1563
consensus_12240#1      CG- 1139
                       **