These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12248#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1961 fasta sequence [TGACTTCGACTCCACACAGCAGCGACGCCACCTACTCTCTCTCTCTGTCTCTCGCTCTCGCCGTCGCCGAGCTAGTTGAGCCGCGGATGGATAGCCCCGGTGGTGCGGCGGCGGCGGCGGCGGCGGCGGAGTCCAGCAATCGCGCGGGAGAAGATGCTAAAAGTGATGGTGTATCTTGTCAGAATTCGCGACGGCCAAACCTTTCATTACAAATACCAAACAGGGCATTTGATGACACTCTGCCAACGTCAACTAGAATCAAAATATCACCCAGCCCAAATTCTGCAAGAAGTGGTTTACCACCAAGGCCGAATTCAACTAGAACAAAATCATCCATCAGGGGCATCATTCCACAAAGGAGCTTCAAAGCAAAGAGTTCATTACAGGATGGTGACCAGACAATTCTTCTAATTCCTGACACACCATCATCATCAGGACAGCAGGTGAAGGCAACTACATCAAGATCATTTTCTTTCACAAAGGTCATCAACTCCTTATCAGCGAAGCGAACCCACTCTCTTCCAGTTACTCCTGTTGCAGCTTCAGGACCTTCTTCTCATGAAGGTCATGCAGACAACCTGCCAAGTACAGTTAAGAATGAGGTTGAAACACAAATTAGGCGCTCACTCTCAGCACCAGGAAATCATGATAGTAAGGATCTGAGGAGGACGGCTTCATCAGGCCTTATACGTGTGATTCCCACAACCCCACGACCTGTTCCTGTTGAAACTGTTGCATCAAATGATGGCATTGAAGAAGCAGTAGATGCTCCTGAAGATGGAGGTGAAGACATTCCTGAAGAAGATGCTGTCTGCAGAATTTGCCTAGTTGAACTCAATGAAGGAGGTGAAACACTTAAATTGGAGTGCAGCTGCAAGGGAGAACTTGCTCTTGCACACCAGGAGTGTGCAATAAAATGGTTTAGCATCAAGGGAAACAAGACATGCGATGTTTGCAGGCAGGAAGTTCAGAATCTACCTGTGACTTTATTGAGAATACAGATTCGAACTGTTAACAGACAACCGCGGAATGGTGTTCAGCAAAGAGCAGCACATCCACACAGATTTTGGAAGGAGACTCCAGTTCTAGTCATGGTCAGCACGCTTGCGTACTTCTGTTTCTTGGAGCAACTCTTGGTTGCTGATATGAAGTCACGTGCACTAGCTATTTCTTTGCCTTTCTCCTGTCTCCTGGGCATATTTTCTTCCATCCTCGCATCCACAATGGCAACCGATAATTACCTATGGGCTTTCGCTACGTTCCAGTTTGCTTTCCTAATCCTATTTGCTCATATTTTCTACAACTTGTTAAAAATGGGGGCAGTCCTTGCAATCCTACTTGCATCGTTCACTGGTTTCGGCATCGCTATTAGTCTAAATGCAATGCTAATAGAATACCTGAGGTGGAGACTCCTGCGGAATCAACGGTTAACTCAACGTAGAAATCACAGACATGGTCAATCTGGAAACAATGCTTCAAACGAGAACACTGCAAGTAATGCTAGGCAGCAAGGCAGCGGAAGCGATCAACAGTCTGCAGAACATGGCTGAAGATGATCCATCTGTGGTTTTGCAGGTATCATGGTGATGATAAAATTCAAAATCAAAAGTGTTAATGAATGAATGGAATAAAGGCGCCACTGGTAAAACCGCAAATCTGCAATTCCAAGAATGCCATGGCCGGTTGCCACCTAAGTTGATCGTGAAACAAAGTTATTATTCAGAAAAAGGGGGCTCTCAAGTCTCTCAACTCTGAACCAAAAAGGTCCAGCAGTCTCCATTTACTCCCGGTTATAGTTTAGTAGTCCA-GTGTGATATGTGTGTTTATGAAATGTATAAATTGCGAAAGCAAATACTACACACCGACCTTTGTATCACAACCATGAACA-AACTGTATATAGCTCATCGTTGTCGATTTTACTTTGCTGCAAACTGTGAGATGGAGATGCTACAAAAAAAAAA] [+] EMBL AK069562 [TGACTTCGACTCCACACAGCAGCGACGCCACCTACTCTCTCTCTCTGTCTCTCGCTCTCGCCGTCGCCGAGCTAGTTGAGCCGCGGATGGATAGCCCCGGTGGTGCGGCGGCGGCGGCGGCGGCGGCGGAGTCCAGCAATCGCGCGGGAGAAGATGCTAAAAGTGATGGTGTATCTTGTCAGAATTCGCGACGGCCAAACCTTTCATTACAAATACCAAACAGGGCATTTGATGACACTCTGCCAACGTCAACTAGAATCAAAATATCACCCAGCCCAAATTCTGCAAGAAGTGGTTTACCACCAAGGCCGAATTCAACTAGAACAAAATCATCCATCAGGGGCATCATTCCACAAAGGAGCTTCAAAGCAAAGAGTTCATTACAGGATGGTGACCAGACAATTCTTCTAATTCCTGACACACCATCATCATCAGGACAGCAGGTGAAGGCAACTACATCAAGATCATTTTCTTTCACAAAGGTCATCAACTCCTTATCAGCGAAGCGAACCCACTCTCTTCCAGTTACTCCTGTTGCAGCTTCAGGACCTTCTTCTCATGAAGGTCATGCAGACAACCTGCCAAGTACAGTTAAGAATGAGGTTGAAACACAAATTAGGCGCTCACTCTCAGCACCAGGAAATCATGATAGTAAGGATCTGAGGAGGACGGCTTCATCAGGCCTTATACGTGTGATTCCCACAACCCCACGACCTGTTCCTGTTGAAACTGTTGCATCAAATGATGGCATTGAAGAAGCAGTAGATGCTCCTGAAGATGGAGGTGAAGACATTCCTGAAGAAGATGCTGTCTGCAGAATTTGCCTAGTTGAACTCAATGAAGGAGGTGAAACACTTAAATTGGAGTGCAGCTGCAAGGGAGAACTTGCTCTTGCACACCAGGAGTGTGCAATAAAATGGTTTAGCATCAAGGGAAACAAGACATGCGATGTTTGCAGGCAGGAAGTTCAGAATCTACCTGTGACTTTATTGAGAATACAGATTCGAACTGTTAACAGACAACCGCGGAATGGTGTTCAGCAAAGAGCAGCACATCCACACAGATTTTGGAAGGAGACTCCAGTTCTAGTCATGGTCAGCACGCTTGCGTACTTCTGTTTCTTGGAGCAACTCTTGGTTGCTGATATGAAGTCACGTGCACTAGCTATTTCTTTGCCTTTCTCCTGTCTCCTGGGCATATTTTCTTCCATCCTCGCATCCACAATGGCAACCGATAATTACCTATGGGCTTTCGCTACGTTCCAGTTTGCTTTCCTAATCCTATTTGCTCATATTTTCTACAACTTGTTAAAAATGGGGGCAGTCCTTGCAATCCTACTTGCATCGTTCACTGGTTTCGGCATCGCTATTAGTCTAAATGCAATGCTAATAGAATACCTGAGGTGGAGACTCCTGCGGAATCAACGGTTAACTCAACGTAGAAATCACAGACATGGTCAATCTGGAAACAATGCTTCAAACGAGAACACTGCAAGTAATGCTAGGCAGCAAGGCAGCGGAAGCGATCAACAGTCTGCAGAACATGGCTGAAGATGATCCATCTGTGGTTTTGCAGGTATCATGGTGATGATAAAATTCAAAATCAAAAGTGTTAATGAATGAATGGAATAAAGGCGCCACTGGTAAAACCGCAAATCTGCAATTCCAAGAATGCCATGGCCGGTTGCCACCTAAGTTGATCGTGAAACAAAGTTATTATTCAGAAAAAGGGGGCTCTCAAGTCTCTCAACTCTGAACCAAAAAGGTCCAGCAGTCTCCATTTACTCCCGGTTATAGTTTAGTAGTCCA GTGTGATATGTGTGTTTATGAAATGTATAAATTGCGAAAGCAAATACTACACACCGACCTTTGTATCACAACCATGAACA AACTGTATATAGCTCATCGTTGTCGATTTT ] [+] EMBL CB668631 [ GCGACGCCACCTACTCTCTCTCTCTGTCTCTCGCTCTCGCCGTCGCCGAGCTAGTTGAGCCGCGGATGGATAGCCCCGGTGGTGCGGCGGCGGCGGCGGCGGCGGCGGAGTCCAGCAATCGCGCGGGAGAAGATGCTAAAAGTGATGGTGTATCTTGTCAGAATTCGCGACGGCCAAACCTTTCATTACAAATACCAAACAGGGCATTTGATGACACTCTGCCAACGTCAACTAGAATCAAAATATCACCCAGCCCAAATTCTGCAAGAAGTGGTTTACCACCAAGGCCGAATTCAACTAGAACAAAATCATCCATCAGGGGCATCATTCCACAAAGGAGCTTCAAAGCAAAGAGTTCATTACAGGATGGTGACCAGACAATTCTTCTAATTCCTGACACACCATCATCATCAGGACAGCAGGTGAAGGCAACTACATCAAGATCATTTTCTTTCACAAAGGTCATCAACTCCTTATCAGCGAAGCGAACCCACTCTCTTCCAGTTACTCCTGTTGCAGCTTCAGGACCTTCTTCTCATGAAGGTCATGCAGACAACCTGCCAAGTACAGTTAAGAATGAGGTTGAAACACAAATTAGGCGCTCACTCTCAGCACCAGGAAATCATGATAGTAAGGATCTGAGGAGGACGGCTTCATCAGGCCTTATACGTGTGATTCCCACAACCCCACGACCTGTTCCTGTTGAAACTGTTGCATCAAATGATGGCATTGAAGAAGCAGTAGATGCTCCTGAAGATGGAGGTGAAGACATTCCTGAAGAAGATGCTGTCTGCAGAATTTGCC ] [+] EMBL AK101610 [ TCTCTCTCTGTCTCTCGCTCTCGCCGTCGCCGAGCTAGTTGAGCCGCGGATGGATAGCCCCGGTGGTGCGGCGGCGGCGGCGGCGGCGGCGGAGTCCAGCAATCGCGCGGGAGAAGATGCTAAAAGTGATGGTGTATCTTGTCAGAATTCGCGACGGCCAAACCTTTCATTACAAATACCAAACAGGGCATTTGATGACACTCTGCCAACGTCAACTAGAATCAAAATATCACCCAGCCCAAATTCTGCAAGAAGTGGTTTACCACCAAGGCCGAATTCAACTAGAACAAAATCATCCATCAGGGGCATCATTCCACAAAGGAGCTTCAAAGCAAAGAGTTCATTACAGGATGGTGACCAGACAATTCTTCTAATTCCTGACACACCATCATCATCAGGACAGCAGGTGAAGGCAACTACATCAAGATCATTTTCTTTCACAAAGGTCATCAACTCCTTATCAGCGAAGCGAACCCACTCTCTTCCAGTTACTCCTGTTGCAGCTTCAGGACCTTCTTCTCATGAAGGTCATGCAGACAACCTGCCAAGTACAGTTAAGAATGAGGTTGAAACACAAATTAGGCGCTCACTCTCAGCACCAGGAAATCATGATAGTAAGGATCTGAGGAGGACGGCTTCATCAGGCCTTATACGTGTGATTCCCACAACCCCACGACCTGTTCCTGTTGAAACTGTTGCATCAAATGATGGCATTGAAGAAGCAGTAGATGCTCCTGAAGATGGAGGTGAAGACATTCCTGAAGAAGATGCTGTCTGCAGAATTTGCCTAGTTGAACTCAATGAAGGAGGTGAAACACTTAAATTGGAGTGCAGCTGCAAGGGAGAACTTGCTCTTGCACACCAGGAGTGTGCAATAAAATGGTTTTGCATCAAGGGAAACAAGACATGCGATGTTTGCAGGCAGGAAGTTCAGAATCTACCTGTGACTTTATTGAGAATACAGATTCGAACTGTTAACAGACAACCGCGGAATGGTGTTCAGCAAAGAGCAGCACATCCACACAGATTTTGGAAGGAGACTCCAGTTCTAGTCATGGTCAGCACGCTTGCGTACTTCTGTTTCTTGGAGCAACTCTTGGTTGCTGATATGAAGTCACGTGCACTAGCTATTTCTTTGCCTTTCTCCTGTCTCCTGGGCATATTTTCTTCCATCCTCGCATCCACAATGGCAACCGATAATTACCTATGGGCTTTCGCTACGTTCCAGTTTGCTTTCCTAATCCTATTTGCTCATATTTTCTACAACTTGTTAAAAATGGGGGCAGTCCTTGCAATCCTACTTGCATCGTTCACTGGTTTCGGCATCGCTATTAGTCTAAATGCAATGCTAATAGAATACCTGAGGTGGAGACTCCTGCGGAATCAACGGTTAACTCAACGTAGAAATCACAGACATGGTCAATCTGGAAACAATGCTTCAAACGAGAACACTGCAAGTAATGCTAGGCAGCAAGGCAGCGGAAGCGATCAACAGTCTGCAGAACATGGCTGAAGATGATCCATCTGTGGTTTTGCAGGTATCATGGTGATGATAAAATTCAAAATCAAAAGTGTTAATGAATGAATGGAATAAAGGCGCCACTGGTAAAACCGCAAATCTGCAATTCCAAGAATGCCATGGCCGGTTGCCACCTAAGTTGATCGTGAAACAAAGTTATTATTCAGAAAAAGGGGGCTCTCAAGTCTCTCAACTCTGAACCAAAAAGGTCCAGCAGTCTCCATTTACTCCCGGTTATAGTTTAGTAGTCCA GTGTGATATGTGTGTTTATGAAATGTATAAATTGCGAAAGCAAATACTACACACCGACCTTTGTATCACAACCATGAACA AACTGTATATAGCTCATCGT ] [+] EMBL CB657056 [ GCTAGTTGAGCCGCGGATGGATAGCCCCGGTGGTGCGGCGGCGGCGGCGGCGGCGGCGGAGTCCAGCAATCGCGCGGGAGAAGATGCTAAAAGTGATGGTGTATCTTGTCAGAATTCGCGACGGCCAAACCTTTCATTACAAATACCAAACAGGGCATTTGATGACACTCTGCCAACGTCAACTAGAATCAAAATATCACCCAGCCCAAATTCTGCAAGAAGTGGTTTACCACCAAGGCCGAATTCAACTAGAACAAAATCATCCATCAGGGGCATCATTCCACAAAGGAGCTTCAAAGCAAAGAGTTCATTACAGGATGGTGACCAGACAATTCTTCTAATTCCTGACACACCATCATCATCAGGACAGCAGGTGAAGGCAACTACATCAAGATCATTTTCTTTCACAAAGGTCATCAACTCCTTATCAGCGAAGCGAACCCACTCTCTTCCAGTTACTCCTGTTGCAGCTTCAGGACCTTCTTCTCATGAAGGTCATGCAGACAACCTGCCAAGTACAGTTAAGAATGAGGTTGAAACACAAATTAGGCGCTCACTCTCAGCACCAGGAAATCATGATAGTAAGGATCTGAGGAGGACGGCTTCATCAGGCCTTATACGTGTGATTCCCACAACCCCACGACCTGTTCCTGTTGAAACTGTTGCATCAAATGATGGCATTGAAGAAGCAGTAGATGCTCCTGAAGATGGAGGTGAAGACATTCCTGAAGAAGATGCTGTCTGCAGAATTTGCCTAGTTG ] [+] EMBL CF323503 [ GGAGTCCAGCAATCGCGCGGGAGAAGATGCTAAAAGTGATGGTGTATCTTGTCAGAATTCGCGACGGCCAAACCTTTCATTACAAATACCAAACAGGGCATTTGATGACACTCTGCCAACGTCAACTAGAATCAAAATATCACCCAGCCCAAATTCTGCAAGAAGTGGTTTACCACCAAGGCCGAATTCAACTAGAACAAAATCATCCATCAGGGGCATCATTCCACAAAGGAGCTTCAAAGCAAAGAGTTCATTACAGGATGGTGACCAGACAATTCTTCTAATTCCTGACACACCATCATCATCAGGACAGCAGGTGAAGGCAACTACATCAAGATCATTTTCTTTCACAAAGGTCATCAACTCCTTATCAGCGAAGCGAACCCACTCTCTTCCAGTTACTCCTGTTGCAGCTTCAGGACCTTCTTCTCATGAAGGTCATGCAGACAACCTGCCAAGTACAGTTAAGAATGAGGTTGAAACACAAATTAGGCGCTCACTCTCAGCACCAGGAAATCATGA ] [+] EMBL CF322876 [ GGAGTCCAGCAATCGCGCGGGAGAAGATGCTAAAAGTGATGGTGTATCTTGTCAGAATTCGCGACGGCCAAACCTTTCATTACAAATACCAAACAGGGCATTTGATGACACTCTGCCAACGTCAACTAGAATCAAAATATCACCCAGCCCAAATTCTGCAAGAAGTGGTTTACCACCAAGGCCGAATTCAACTAGAACAAAATCATCCATCAGGGGCATCATTCCACAAAGGAGCTTCAAAGCAAAGAGTTCATTACAGGATGGTGACCAGACAATTCTTCTAATTCCTGACACACCATCATCATCAGGACAGCAGGTGAAGGCAACTACATCAAGATCATTTTCTTTCACAAAGGTCATCAACTCCTTATCAGCGAAGCGAACCCACTCTCTTCCAGTTACTCCTGTTGCAGCTTCAGGACCTTCTTCTCATGAAGGTCATGCAGACAACCTGCCAAGTACA ] [-] EMBL CB619514 [ TCTTCCATCCTCGCATCCACAATGGCAACCGATAATTACCTATGGGCTTTCGCTACGTTCCAGTTTGCTTTCCTAATCCTATTTGCTCATATTTTCTACAACTTGTTAAAAATGGGGGCAGTCCTTGCAATCCTACTTGCATCGTTCACTGGTTTCGGCATCGCTATTAGTCTAAATGCAATGCTAATAGAATACCTGAGGTGGAGACTCCTGCGGAATCAACGGTTAACTCAACGTAGAAATCACAGACATGGTCAATCTGGAAACAATGCTTCAAACGAGAACACTGCAAGTAATGCTAGGCAGCAAGGCAGCGGAAGCGATCAACAGTCTGCAGAACATGGCTGAAGATGATCCATCTGTGGTTTTGCAGGTATCATGGTGATGATAAAATTCAAAATCAAAAGTGTTAATGAATGAATGGAATAAAGGCGCCACTGGTAAAACCGCAAATCTGCAATTCCAAGAATGCCATGGCCGGTTGCCACCTAAGTTGATCGTGAAACAAAGTTATTATTCAGAAAAAGGGGGCTCTCAAGTCTCTCAACTCTGAACCAAAAAGGTCCAGCAGTCTCCATTTACTCCCGGTTATAGTTTAGTAGTCCA GTGTGATATGTGTGTTTATGAAATGTATAAATTGCGAAAGCAAATACTACACACCGACCTTTGTATCACAACCATGAAAAGGGCTGTATATAGCTCATCG ] [+] EMBL BI813424 [ ATGCCAT GCCGGTTGCCACCTAAGTTGATCGTGAAACAAAGTTATTATTCAGAAAAAGGGGGCTCTCAAGTCTCTCAACTCTGAACCCAAAAGGTCCA CAGTCTCCATTTACTCCCGGTTATAGTTTAGTAGTCCACGTGTGATATGTGTGTTTATGAAATGTATAAATTGCGAAAGCAAATACTACACACCGACCTTTGTATCACAACCATGAAC AACTGTATATAGCTCATCGTTGTCGATTTTACTTTGCTGCAAACTGTGAGATGGAGATGCTACAAAAAAAAAA] consensusID : consensus_12248#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 717 fasta sequence [TTTCCATCCTCGCATCCGCAATGGCAACGGATAATTACCTATGGGCTTTCGCTACGTTCCAGTTTGCTTTCCTAATCCTATTTGCTCATATTTTTTACAACTTGTTAAAAATGGGGGCAGTCCTTGCAATCCTAATTGCATTGTTCACTGGTTTTGGCATCGGTATTAGTTTAAATGCAATGGTAATAGAATTCCTGAGGTGGAGACTCCTGCGGAATCAACGGTTAACTTAACGTAGAAATCACAGACATGGTCAATTTGGAAACAATGCTTCAAACGAGAACCCTGCAAGTAATGTTAGGCAGCAAGGCAGCGGAAGCGATCAACAGTTTGCAGAACATGGCTGAAGATGATCCATCTGTGGTTTTGCAGGTATCATGGTGATGATAAATTGCTGAATTTTGCAGATTCAAAATCAAAAGTGTTAATGAATGAATGGAATAAAGGCGCCCCTGGTAAAACCGCAAATTTGCAATTCCAAGAATGCCATGGCCGGTTGCCCCCTAAGTTGATTGTGAAACAAAGTTATTATTCAGAAAAAGGGGGGTTTCAAGTTTTTCTATTTTGAACCAAAAAGGTCCAGCAGTTTCCATTTACTCCCGGTTATAGTTTAGTAGTCCAGTGTGATATGGGTGTTTATGAAATGTATAAATTGGGAAAGCAAATACTACACCCCGACCTTTGTATTACAACCATGACCAAACTGAATATAGCTCA] [-] EMBL CB668632 [TTTCCATCCTCGCATCCGCAATGGCAACGGATAATTACCTATGGGCTTTCGCTACGTTCCAGTTTGCTTTCCTAATCCTATTTGCTCATATTTTTTACAACTTGTTAAAAATGGGGGCAGTCCTTGCAATCCTAATTGCATTGTTCACTGGTTTTGGCATCGGTATTAGTTTAAATGCAATGGTAATAGAATTCCTGAGGTGGAGACTCCTGCGGAATCAACGGTTAACTTAACGTAGAAATCACAGACATGGTCAATTTGGAAACAATGCTTCAAACGAGAACCCTGCAAGTAATGTTAGGCAGCAAGGCAGCGGAAGCGATCAACAGTTTGCAGAACATGGCTGAAGATGATCCATCTGTGGTTTTGCAGGTATCATGGTGATGATAAATTGCTGAATTTTGCAGATTCAAAATCAAAAGTGTTAATGAATGAATGGAATAAAGGCGCCCCTGGTAAAACCGCAAATTTGCAATTCCAAGAATGCCATGGCCGGTTGCCCCCTAAGTTGATTGTGAAACAAAGTTATTATTCAGAAAAAGGGGGGTTTCAAGTTTTTCTATTTTGAACCAAAAAGGTCCAGCAGTTTCCATTTACTCCCGGTTATAGTTTAGTAGTCCAGTGTGATATGGGTGTTTATGAAATGTATAAATTGGGAAAGCAAATACTACACCCCGACCTTTGTATTACAACCATGACCAAACTGAATATAGCTCA] consensusID : consensus_12248#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 493 fasta sequence [TGATCCATCTGTGGTTTTCAGGTATCATGTGATGATAAATTGCTGAATTCTGCAGATTCAAAATCAAAAGTCGTTAATGAATGAATGGAATAAACGGCGCCACTGGTACAAACCGCACAATCTGCAATTCCAAGAATCCCATGGCCGGTTGCCACCTAAGTTGATCGTGAAACAAGTTACTTATTCAGAAAAAGGGGGCTCCTCAAGTCTCTCAACTCTGAACCAAAAAGGTCCACAGTCTCCATTTACTCCCGGTTATACGTTTAGTAGTCCAGTGTGATATGTGTGTTTATGAAATGTATAAATTGCGAAAGCAAATACTACACACCGACCTTTGTATCACAACCATGAACAAACTGTATATAGCTCATCGTTGTCGATTTTACTTTGCTGCAAACTGTGAGATGGAGATGCTACATTCTCTGAATTTTCTTTCTGCAGTCAGGTTCCCTGAACTGTATATCCAACTTCGACGAAATCCGAGACAAAAAAA] [+] EMBL BI811811 [TGATCCATCTGTGGTTTTCAGGTATCATGTGATGATAAATTGCTGAATTCTGCAGATTCAAAATCAAAAGTCGTTAATGAATGAATGGAATAAACGGCGCCACTGGTACAAACCGCACAATCTGCAATTCCAAGAATCCCATGGCCGGTTGCCACCTAAGTTGATCGTGAAACAAGTTACTTATTCAGAAAAAGGGGGCTCCTCAAGTCTCTCAACTCTGAACCAAAAAGGTCCACAGTCTCCATTTACTCCCGGTTATACGTTTAGTAGTCCAGTGTGATATGTGTGTTTATGAAATGTATAAATTGCGAAAGCAAATACTACACACCGACCTTTGTATCACAACCATGAACAAACTGTATATAGCTCATCGTTGTCGATTTTACTTTGCTGCAAACTGTGAGATGGAGATGCTACATTCTCTGAATTTTCTTTCTGCAGTCAGGTTCCCTGAACTGTATATCCAACTTCGACGAAATCCGAGACAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12248#0 TGACTTCGACTCCACACAGCAGCGACGCCACCTACTCTCTCTCTCTGTCTCTCGCTCTCG 60 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CCGTCGCCGAGCTAGTTGAGCCGCGGATGGATAGCCCCGGTGGTGCGGCGGCGGCGGCGG 120 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CGGCGGCGGAGTCCAGCAATCGCGCGGGAGAAGATGCTAAAAGTGATGGTGTATCTTGTC 180 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 AGAATTCGCGACGGCCAAACCTTTCATTACAAATACCAAACAGGGCATTTGATGACACTC 240 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 TGCCAACGTCAACTAGAATCAAAATATCACCCAGCCCAAATTCTGCAAGAAGTGGTTTAC 300 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CACCAAGGCCGAATTCAACTAGAACAAAATCATCCATCAGGGGCATCATTCCACAAAGGA 360 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 GCTTCAAAGCAAAGAGTTCATTACAGGATGGTGACCAGACAATTCTTCTAATTCCTGACA 420 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CACCATCATCATCAGGACAGCAGGTGAAGGCAACTACATCAAGATCATTTTCTTTCACAA 480 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 AGGTCATCAACTCCTTATCAGCGAAGCGAACCCACTCTCTTCCAGTTACTCCTGTTGCAG 540 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CTTCAGGACCTTCTTCTCATGAAGGTCATGCAGACAACCTGCCAAGTACAGTTAAGAATG 600 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 AGGTTGAAACACAAATTAGGCGCTCACTCTCAGCACCAGGAAATCATGATAGTAAGGATC 660 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 TGAGGAGGACGGCTTCATCAGGCCTTATACGTGTGATTCCCACAACCCCACGACCTGTTC 720 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CTGTTGAAACTGTTGCATCAAATGATGGCATTGAAGAAGCAGTAGATGCTCCTGAAGATG 780 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 GAGGTGAAGACATTCCTGAAGAAGATGCTGTCTGCAGAATTTGCCTAGTTGAACTCAATG 840 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 AAGGAGGTGAAACACTTAAATTGGAGTGCAGCTGCAAGGGAGAACTTGCTCTTGCACACC 900 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 AGGAGTGTGCAATAAAATGGTTTAGCATCAAGGGAAACAAGACATGCGATGTTTGCAGGC 960 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 AGGAAGTTCAGAATCTACCTGTGACTTTATTGAGAATACAGATTCGAACTGTTAACAGAC 1020 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 AACCGCGGAATGGTGTTCAGCAAAGAGCAGCACATCCACACAGATTTTGGAAGGAGACTC 1080 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CAGTTCTAGTCATGGTCAGCACGCTTGCGTACTTCTGTTTCTTGGAGCAACTCTTGGTTG 1140 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CTGATATGAAGTCACGTGCACTAGCTATTTCTTTGCCTTTCTCCTGTCTCCTGGGCATAT 1200 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 TTTCTTCCATCCTCGCATCCACAATGGCAACCGATAATTACCTATGGGCTTTCGCTACGT 1260 consensus_12248#1 ---TTTCCATCCTCGCATCCGCAATGGCAACGGATAATTACCTATGGGCTTTCGCTACGT 57 consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 TCCAGTTTGCTTTCCTAATCCTATTTGCTCATATTTTCTACAACTTGTTAAAAATGGGGG 1320 consensus_12248#1 TCCAGTTTGCTTTCCTAATCCTATTTGCTCATATTTTTTACAACTTGTTAAAAATGGGGG 117 consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CAGTCCTTGCAATCCTACTTGCATCGTTCACTGGTTTCGGCATCGCTATTAGTCTAAATG 1380 consensus_12248#1 CAGTCCTTGCAATCCTAATTGCATTGTTCACTGGTTTTGGCATCGGTATTAGTTTAAATG 177 consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CAATGCTAATAGAATACCTGAGGTGGAGACTCCTGCGGAATCAACGGTTAACTCAACGTA 1440 consensus_12248#1 CAATGGTAATAGAATTCCTGAGGTGGAGACTCCTGCGGAATCAACGGTTAACTTAACGTA 237 consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 GAAATCACAGACATGGTCAATCTGGAAACAATGCTTCAAACGAGAACACTGCAAGTAATG 1500 consensus_12248#1 GAAATCACAGACATGGTCAATTTGGAAACAATGCTTCAAACGAGAACCCTGCAAGTAATG 297 consensus_12248#2 ------------------------------------------------------------ consensus_12248#0 CTAGGCAGCAAGGCAGCGGAAGCGATCAACAGTCTGCAGAACATGGCTGAAGATGATCCA 1560 consensus_12248#1 TTAGGCAGCAAGGCAGCGGAAGCGATCAACAGTTTGCAGAACATGGCTGAAGATGATCCA 357 consensus_12248#2 -----------------------------------------------------TGATCCA 7 ******* consensus_12248#0 TCTGTGGTTTTGCAGGTATCATGGTGATGATAAA----------------ATTCAAAATC 1604 consensus_12248#1 TCTGTGGTTTTGCAGGTATCATGGTGATGATAAATTGCTGAATTTTGCAGATTCAAAATC 417 consensus_12248#2 TCTGTGGTTTT-CAGGTATCATG-TGATGATAAATTGCTGAATTCTGCAGATTCAAAATC 65 *********** *********** ********** ********** consensus_12248#0 AAAAGT-GTTAATGAATGAATGGAATAAA-GGCGCCACTGGTA-AAACCGCA-AATCTGC 1660 consensus_12248#1 AAAAGT-GTTAATGAATGAATGGAATAAA-GGCGCCCCTGGTA-AAACCGCA-AATTTGC 473 consensus_12248#2 AAAAGTCGTTAATGAATGAATGGAATAAACGGCGCCACTGGTACAAACCGCACAATCTGC 125 ****** ********************** ****** ****** ******** *** *** consensus_12248#0 AATTCCAAGAATGCCATGGCCGGTTGCCACCTAAGTTGATCGTGAAACAAAGTTATTATT 1720 consensus_12248#1 AATTCCAAGAATGCCATGGCCGGTTGCCCCCTAAGTTGATTGTGAAACAAAGTTATTATT 533 consensus_12248#2 AATTCCAAGAATCCCATGGCCGGTTGCCACCTAAGTTGATCGTGAAACAAGTTACTTATT 185 ************ *************** *********** ********* * ***** consensus_12248#0 CAGAAAAAGGGGGCTC-TCAAGTCTCTCAACTCTGAACCAAAAAGGTCCAGCAGTCTCCA 1779 consensus_12248#1 CAGAAAAAGGGGGGTT-TCAAGTTTTTCTATTTTGAACCAAAAAGGTCCAGCAGTTTCCA 592 consensus_12248#2 CAGAAAAAGGGGGCTCCTCAAGTCTCTCAACTCTGAACCAAAAAGGTCCA-CAGTCTCCA 244 ************* * ****** * ** * * ***************** **** **** consensus_12248#0 TTTACTCCCGGTTATA-GTTTAGTAGTCCAGTGTGATATGTGTGTTTATGAAATGTATAA 1838 consensus_12248#1 TTTACTCCCGGTTATA-GTTTAGTAGTCCAGTGTGATATGGGTGTTTATGAAATGTATAA 651 consensus_12248#2 TTTACTCCCGGTTATACGTTTAGTAGTCCAGTGTGATATGTGTGTTTATGAAATGTATAA 304 **************** *********************** ******************* consensus_12248#0 ATTGCGAAAGCAAATACTACACACCGACCTTTGTATCACAACCATGAACAAACTGTATAT 1898 consensus_12248#1 ATTGGGAAAGCAAATACTACACCCCGACCTTTGTATTACAACCATGACCAAACTGAATAT 711 consensus_12248#2 ATTGCGAAAGCAAATACTACACACCGACCTTTGTATCACAACCATGAACAAACTGTATAT 364 **** ***************** ************* ********** ******* **** consensus_12248#0 AGCTCATCGTTGTCGATTTTACTTTGCTGCAAACTGTGAGATGGAGATGCTACAAAAAAA 1958 consensus_12248#1 AGCTCA------------------------------------------------------ 717 consensus_12248#2 AGCTCATCGTTGTCGATTTTACTTTGCTGCAAACTGTGAGATGGAGATGCTACATTCTCT 424 ****** consensus_12248#0 AAA--------------------------------------------------------- 1961 consensus_12248#1 ------------------------------------------------------------ consensus_12248#2 GAATTTTCTTTCTGCAGTCAGGTTCCCTGAACTGTATATCCAACTTCGACGAAATCCGAG 484 consensus_12248#0 --------- consensus_12248#1 --------- consensus_12248#2 ACAAAAAAA 493 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||