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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12252#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1493 fasta sequence
[CACCATCTTCTTCTTCTTCTTCTTCGTCTTCGTCACCGCCAGCCAACCACCTGACAAAGCAAGCAATCGAGCTGAGCACCCCAACCCAACCCTAGGCAGAGGCTGAGGCTGAGCGAGATCGCGGGCATGAGCTCCGCGCCGCAGCAGTTGCTCGATTCGTCGTCTCCGGGGCCGGGGCCGGGGCCGGAGGTGGAGGACGACGGGGGAAGGAGGGTGAGGAAGCCCTACACCATCACCAAGTCGCGGGAGAGCTGGACCGACCCCGAGCACGACAAGTTCCTCGAGGCGCTGCAGCTGTTTGATCGTGATTGGAAAAAGATTGAAGCATATG-TTGGCTCTAAGACTGTAATACAGATCAGAAGCCATGCACAGAAGTACTTTTTGAAGGTTCAAAAGAATGGAACAGGCGAGCATTTGCCCCCTCCTAGGCCAAAACGGAAGGCAGCACATCCATACCCACATAAAGCCTCAAAAAGAGCCCCTCAAGTTGTCCTACCACAACAAGCTTCTCATCTAATGGAGCAAGGCTGTCTTATACCTATGGACATATCTCCTGTTGCTAGAAACTTTAATGCAAATGATGTATTTTCTTCCTGGGATAGTGCTCTTGCCCAAAGTTTCAGTCCAAGGCATACACATGGTGCAGCAAATAATTGTTCTAGTAGCGTAGAGAGCCAATCTGGAACTTGTCCAACTTCTGAGGCAGTTGAGCAAGAGATCATGCTTCCAACGCTGCGTGCCATGCCAGACTTTGCTCAAGTATACAACTTCCTGGGAAGCATATTTGATCCAGAGACAAGTGGGCATCTTCAGAGGTTGAGAGAGATGGATCCAATCGATGTTGAAACAGTGCTGTTACTGATGAAAAATTTGTCAATAAACCTGACAAACCCAAACTTTGAAGCACATAGGAAGGTACTCGCATCACATGGATATGGCATGGACCAAGTGAAGCATGAGAATTTAGGGGATCTGGGATCAACTCACACCCTTCATCTCCCATTCATGGTAACGACCAAATGAAAGAACACCACCACAATCAGCATCCATTGGGGGTAACAAGCAAACCCTGCTATCAGCACCCAGTGGCGATTTTGAGTGAATCCGAAATACCACATTGTGTTAGCGACATGTTGTACTGTCACGTTGTACATATAGCAGTTAGTAATGCTCTAACCATTAGGCTAGTTTTGCTCATCATCTAGATGGCCAGGTAGTTTATGTGCCTGTGATTTTTTTTTTTTGCCTTTCCTTTTATTTTAACTCATCTATGAACCTGCCACATAGTGGGGTATGTTGTATCACGGCATATGCATGCCTTTTGTTTTTAACCCCCTTTGAGAGTTTGGTACTTTGGTTGCATGTATTTTTGGCCGTGTATGCATATATGTATATGCGTGTGATTATGTATAGCTGTTTGCACAGGCTAACAAACAGTAGTTTGTATGGTAAATAATATGTGTCGTGTCCCCTCAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK111672 [CACCATCTTCTTCTTCTTCTTCTTCGTCTTCGTCACCGCCAGCCAACCACCTGACAAAGCAAGCAATCGAGCTGAGCACCCCAACCCAACCCTAGGCAGAGGCTGAGGCTGAGCGAGATCGCGGGCATGAGCTCCGCGCCGCAGCAGTTGCTCGATTCGTCGTCTCCGGGGCCGGGGCCGGGGCCGGAGGTGGAGGACGACGGGGGAAGGAGGGTGAGGAAGCCCTACACCATCACCAAGTCGCGGGAGAGCTGGACCGACCCCGAGCACGACAAGTTCCTCGAGGCGCTGCAGCTGTTTGATCGTGATTGGAAAAAGATTGAAGCATATG TTGGCTCTAAGACTGTAATACAGATCAGAAGCCATGCACAGAAGTACTTTTTGAAGGTTCAAAAGAATGGAACAGGCGAGCATTTGCCCCCTCCTAGGCCAAAACGGAAGGCAGCACATCCATACCCACATAAAGCCTCAAAAAGAGCCCCTCAAGTTGTCCTACCACAACAAGCTTCTCATCTAATGGAGCAAGGCTGTCTTATACCTATGGACATATCTCCTGTTGCTAGAAACTTTAATGCAAATGATGTATTTTCTTCCTGGGATAGTGCTCTTGCCCAAAGTTTCAGTCCAAGGCATACACATGGTGCAGCAAATAATTGTTCTAGTAGCGTAGAGAGCCAATCTGGAACTTGTCCAACTTCTGAGGCAATTGAGCAAGAGATCATGCTTCCAACGCTGCGTGCCATGCCAGACTTTGCTCAAGTATACAACTTCCTGGGAAGCATATTTGATCCAGAGACAAGTGGGCATCTTCAGAGGTTGAGAGAGATGGATCCAATCGATGTTGAAACAGTGCTGTTACTGATGAAAAATTTGTCAATAAACCTGACAAACCCAAACTTTGAAGCACATAGGAAGGTACTCGCATCACATGGATATGGCATGGACCAAGTGAAGCATGAGAATTTAGGGGATCTGGGATCAACTCACACCCTTCATCTCCCATTCATGGTAACGACCAAATGAAAGAACACCACCACAATCAGCATCCATTGGGGGTAACAAGCAAACCCTGCTATCAGCACCCAGTGGCGATTTTGAGTGAATCCGAAATACCACATTGTGTTAGCGACATGTTGTACTGTCACGTTGTACATATAGCAGTTAGTAATGCTCTAACCATTAGGCTAGTTTTGCTCATCATCTAGATGGCCAGGTAGTTTATGTGCCTGTGATTTTTTTTTTTTGCCTTTCCTTTTATTTTAACTCATCTATGAACCTGCCACATAGTGGGGTATGTTGTATCACGGCATATGCATGCCTTTTGTTTTTAACCCCCTTTGAGAGTTTGGTACTTTGGTTGCATGTATTTTTGGCCGTGTATGCATATATGTATATGCGT ]
[+] EMBL AK119640 [ ACCATTTTCTTCTTCTTCTTCTTCGTCTTCGTCACCGCCAGCCAACCACCTGACAAAGCAAGCAATCGAGCTGAGCACCCCAACCCAACCCTAGGCAGAGGCTGAGGCTGAGCGAGATCGCGGGCATGAGCTCCGCGCCGCAGCAGTTGCTCGATTCGTCGTCTCCGGGGCCGGGGCCGGGGCCGGAGGTGGAGGACGACGGGGGAAGGAGGGTGAGGAAGCCCTACACCATCACCAAGTCGCGGGAGAGTTGGACCGACCCCGAGCACGACAAGTTCCTCGAGGCGCTGCAGCTGTTTGATCGTGATTGGAAAAAGATTGAAGCATATG TTGGCTCTAAGACTGTAATACAGATCAGAAGCCATGCACAGAAGTACTTTTTGAAGGTTCAAAAGAATGGAACAGGCGAGCATTTGCCCCCTCCTAGGCCAAAACGGAAGGCAGCACATCCATACCCACATAAAGCCTCAAAAAGAGCCCCTCAAGTTGTCCTACCACAACAAGCTTCTCATCTAATGGAGCAAGGCTGTCTTATACCTATGGACATATCTCCTGTTGCTAGAAACTTTAATGCAAATGATGTATTTTCTTCCTGGGATAGTGCTCTTGCCCAAAGTTTCAGTCCAAGGCATACACATGGTGCAGCAAATAATTGTTCTAGTAGCGTAGAGAGCCAATCTGGAACTTGTCCAACTTCTGAGGCAATTGAGCAAGAGATCATGCTTCCAACGCTGCGTGCCATGCCAGACTTTGCTCAAGTATACAACTTCCTGGGAAGCATATTTGATCCAGAGACAAGTGGGCATCTTCAGAGGTTGAGAGAGATGGATCCAATCGATGTTGAAACAGTGCTGTTACTGATGAAAAATTTGTCAATAAACCTGACAAACCCAAACTTTGAAGCACATAGGAAGGTACTCGCATCACATGGATATGGCATGGACCAAGTGAAGCATGAGAATTTAGGGGATCTGGGATCAACTCACACCCTTCATCTCCCATTCATGGTAACGACCAAATGAAAGAACACCACCACAATCAGCATCCATTGGGGGTAACAAGCAAACCCTGCTATCAGCACCCAGTGGCGATTTTGAGTGAATCCGAAATACCACATTGTGTTAGCGACATGTTGTACTGTCACGTTGTACATATAGCAGTTAGTAATGCTCTAACCATTAGGCTAGTTTTGCTCATCATCTAGATGGCCAGGTAGTTTATGTGCCTGTGATTTTTTTTTTTTGCCTTTCCTTTTATTTTAACTCATCTATGAACCTGCCACATAGTGGGGTATGTTGTATCACGGCATATGCATGCCTTTTGTTTTTAACCCCCTTTGAGAGTTTGGTACTTTGGTTGCATGTATTTTTGGCCGTGTATGCATATATGTATATGCGTGTGATTATGTATAGCTGTTTGCACAGGCTAACAAACAGTAGTTTGTATGGTAAATAATATGTGTC ]
[+] EMBL CB630035 [ TCTTCTTCTTCGTCTTCGTCACCGCCAGCCAACCACCTGACAAAGCAAGCAATCGAGCTGAGCACCCCAACCCAACCCTAGGCAGAGGCTGAGGCTGAGCGAGATCGCGGGCATGAGCTCCGCGCCGCAGCAGTTGCTCGATTCGTCGTCTCCGGGGCCGGGGCCGGGGCCGGAGGTGGAGGACGACGGGGGAAGGAGGGTGAGGAAGCCCTACACCATCACCAAGTCGCGGGAGAGCTGGACCGACCCCGAGCACGACAAGTTCCTCGAGGCGCTGCAGCTGTTTGATCGTGATTGGAAAAAGATTGAAGCATATG TTGGCTCTAAGACTGTAATACAGATCAGAAGCCATGCACAGAAGTACTTTTTGAAGGTTCAAAAGAATGGAACAGGCGAGCATTTGCCCCCTCCTAGGCCAAAACGGAAGGCAGCACATCCATACCCACATAAAGCCTCAAAAAGAGCCCCTCAAGTTGTCCTACCACAACAAGCTTCTCATCTAATGGAGCAAGGCTGTCTTATACCTATGGACATATCTCCTGTTGCTAGAAACTTTAATGCAAATGATGTATTTTCTTCCTGGGATAGTGCTCTTGCCCAAAGTTTCAGTCCAAGGCATACACATGGTGCAGCAAATAATTGTTCTAGTAGCATAGAGAGCCAATCTGGAACTTGTCCAACTTCTGAGGCAATTGAGCAAGAGATCATGCTTCCAACGCTGCGTGCCATGCCCGACTTTGCTCCAGTATACAACTTCCTGGGAAGC ]
[+] EMBL CF315068 [ GACAAAGCAAGCAATCGAGCTGAGCACCCCAACCCAACCCTAGGCAGAGGCTGAGGCTGAGCGAGATCGCGGGCATGAGCTCCGCGCCGCAGCAGTTGCTCGATTCGTCGTCTCCGGGGCCGGGGCCGGGGCCGGAGGTGGAGGACGACGGGGGAAGGAGGGTGAGGAAGCCCTACACCATCACCAAGTCGCGGGAGAGCTGGACCGACCCCGAGCACGACAAGTTCCTCGAGGCGCTGCAGCTGTTTGATCGTGATTGGAAAAAGATTGAAGCATATG TTGGCTCTAAGACTGTAATACAGATCAGAAGCCATGCACAGAAGTACTTTTTGAAGGTTCAAAAGAATGGAACAGGCGAGCATTTGCCCCCTCCTAGGCCAAAACGGAAGGCAGCACATCCATACCCACATAAAGCCTCAAAAAGAGCCCCTCAAGTTGTCCTACCACAACAAGCTTCTCATCTAATGGAGCAAGGCTGTCTTATACCTATGGACATATCTCCTGTTGCTAGAAACTTTAATGCAAATGATGTA ]
[+] EMBL CF303077 [ AGCAATCGAGCTGAGCACCCCAACCCAACCCTAGGCAGAGGCTGAGGCTGAGCGAGATCGCGGGCATGAGCTCCGCGCCGCAGCAGTTGCTCGATTCGTCGTCTCCGGGGCCGGGGCCGGGGCCGGAGGTGGAGGACGACGGGGGAAGGAGGGTGAGGAAGCCCTACACCATCACCAAGTCGCGGGAGAGCTGGACCGACCCCGAGCACGACAAGTTCCTCGAGGCGCTGCAGCTGTTTGATCGTGATTGGAAAAAGATTGAAGCATATG TTGGCTCTAAGACTGTAATACAGATCAGAAGCCATGCACAGAAGTACTTTTTGAAGGTTCAAAAGAATGGAACAGGCGAGCATTTGCCCCCTCCTAGGCCAAAACGGAAGGCAGCACATCCATACCCACATAAAGCCTCAAAAAGAGCCCCTCAAGTTGTCCTACCACAACAAGCTTCTCATCTAATGGAGCAAGGCTGTCTTATACCTATGGACATATCTCCTGTTGCTAGAAACTTTAATGCAAATG ]
[+] EMBL CB661280 [ ATATGCCTTGCTCTAAGACTGTAATACAGATCAGAAGCCATGCACAGAAGTACTTTTTGAAGGTTCAAAAGAATGGAACAGGCGAGCATTTGCCCCCTCCTAGGCCAAAACGGAAGGCAGCACATCCATACCCACATAAAGCCTCAAAAAGAGCCCCTCAAGTTGTCCTACCACAACAAGCTTCTCATCTAATGGAGCAAGGCTGTCTTATACCTATGGACATATCTCCTGTTGCTAGAAACTTTAATGCAAATGATGTATTTTCTTCCTGGGATAGTGCTCTTGCCCAAAGTTTCAGTCCAAGGCATACACATGGTGCAGCAAATAATTGTTCTAGTAGCGTAGAGAGCCAATCTGGAACTTGTCCAACTTCTGAGGCAGTTGAGCAAGAGATCATGCTTCCAACGCTGCGTGCCATGCCAGACTTTGCTCAAGTATACAACTTCCTGGGAAGCATATTTGATCCAGAGACAAGTGGGCATCTTCAGAGGTTGAGAGAGATGGATCCAATCGATGTTGAAACAGTGCTGTTACTGATGAAAAATTTGTCAATAAACCTGACAAACCCAAACTTTGAAGCACATAGGAAGGTACTCGCATCACATGGATATGGCATGGACCAAGTGAAGCATGAGAATTTAGGGGATCTGGGATCAACTCACACCCTTCATCTCCCATTCATGGTAACGACCAAATGAAAGAACACCACCACAATCAGCATCCATTGGGGGTAACAAGCAAACCCTGCTATCAGCACCCAGTGGCGA ]
[+] EMBL CB661246 [ ATATG TTGGCTCTAAGACTGTAATACAGATCAGAAGCCATGCACAGAAGTACTTTTTGAAGGTTCAAAAGAATGGAACAGGCGAGCATTTGCCCCCTCCTAGGCCAAAACGGAAGGCAGCACATCCATACCCACATAAAGCCTCAAAAAGAGCCCCTCAAGTTGTCCTACCACAACAAGCTTCTCATCTAATGGAGCAAGGCTGTCTTATACCTATGGACATATCTCCTGTTGCTAGAAACTTTAATGCAAATGATGTATTTTCTTCCTGGGATAGTGCTCTTGCCCAAAGTTTCAGTCCAAGGCATACACATGGTGCAGCAAATAATTGTTCTAGTAGCGTAGAGAGCCAATCTGGAACTTGTCCAACTTCTGAGGCAGTTGAGCAAGAGATCATGCTTCCAACGCTGCGTGCCATGCCAGACTTTGCTCAAGTATACAACTTCCTGGGAAGCATATTTGATCCAGAGACAAGTGGGCATCTTCAGAGGTTGAGAGAGATGGATCCAATCGATGTTGAAACAGTGCTGTTACTGATGAAAAATTTGTCAATAAACCTGACAAACCCAAACTTTGAAGCACATAGGAAGGTACTCGCATCACATGGATATGGCATGGACCAAGTGAAGCATGAGAATTTAGGGGATCTGGGATCAACTCACACCCTTCATCTCCCATTCATGGTAACGACCAAATGAAAGAACACCACCACAATCAGCATCCATTGGGGGTAACAAGCAAACCCTGCTATCAGCACCCAGTGGCGATTTTGAGTGAATCCGANATACCACATTGTGTTAGCGACAT ]
[-] EMBL CB661279 [ GCAAGGCTGTCTTATACCTATGGACATATCTCCTGTTGCTAGAAACTTTAATGCAAATGATGTATTTTCTTCCTGGGATAGTGCTCTTGCCCAAAGTTTCAGTCCAAGGCATACACATGGTGCAGCAAATAATTGTTCTAGTAGCGTAGAGAGCCAATCTGGAACTTGTCCAACTTCTGAGGCAGTTGAGCAAGAGATCATGCTTCCAACGCTGCGTGCCATGCCAGACTTTGCTCAAGTATACAACTTCCTGGGAAGCATATTTGATCCAGAGACAAGTGGGCATCTTCAGAGGTTGAGAGAGATGGATCCAATCGATGTTGAAACAGTGCTGTTACTGATGAAAAATTTGTCAATAAACCTGACAAACCCAAACTTTGAAGCACATAGGAAGGTACTCGCATCACATGGATATGGCATGGACCAAGTGAAGCATGAGAATTTAGGGGATCTGGGATCAACTCACACCCTTCATCTCCCATTCATGGTAACGACCAAATGAAAGAACACCACCACAATCAGCATCCATTGGGGGTAACAAGCAAACCCTGCTATCAGCACCCAGTGGCGATTTTGAGTGAATCCGAAATACCACATTGTGTTAGCGACATGTTGTACTGTCACGTTGTACATATAGCAGTTAGTAATGCTGTAACCATTAGGCTAGTTTTGCTCATCATCTAGATGGCCAGGTAGTTTATGTGCCTGTGATTTTTTTTTTTTGCCTTTCCTTTTATTTTAACTCATCTATGAACCTGCCACATAGTGGGGTATGTTGTATCACGGCATATGCAT ]
[-] EMBL CB661245 [ ACATATCTCCTGTTGCTAGAAACTNTAATGCAAATGATGTATTTTCTTCCTGGGATAGTGCTCTTGCCCAAAGTTTCAGTCCAAGGCATACACATGGTGCAGCAAATAATTGTTCTAGTAGCGTAGAGAGCCAATCTGGAACTTGTCCAACTTCTGAGGCAGTTGAGCAAGAGATCATGCTTCCAACGCTGCGTGCCATGCCAGACTTTGCTCAAGTATACAACTTCCTGGGAAGCATATTTGATCCAGAGACAAGTGGGCATCTTCAGAGGTTGAGAGAGATGGATCCAATCGATGTTGAAACAGTGCTGTTACTGATGAAAAATTTGTCAATAAACCTGACAAACCCAAACTTTGAAGCACATAGGAAGGTACTCGCATCACATGGATATGGCATGGACCAAGTGAAGCATGAGAATTTAGGGGATCTGGGATCAACTCACACCCTTCATCTCCCATTCATGGTAACGACCAAATGAAAGAACACCACCACAATCAGCATCCATTGGGGGTAACAAGCAAACCCTGCTATCAGCACCCAGTGGCGATTTTGAGTGAATCCGAAATACCACATTGTGTTAGCGACATGTTGTACTGTCACGTTGTACATATAGCAGTTAGTAATGCTCTAACCATTAGGCTAGTTTTGCTCATCATCTAGATGGCCAGGTAGTTTATGTGCCTGTGATTTTTTTTTTTTGCCTTTCCTTTTATTTTAACTCATCTATGAACCTGCCACATAGTGGGGTATGTTGTATCACGGGATATnc ]
[-] EMBL CA760888 [ aaaaaATGGATCCAATCGGT TTTAACCAGTGCTGTTTCTGATAAAAAATTTGTCAATAACCTTGCCAAACCCAACCTTTTAAGCCCATAGGAAGGTCCTCGCATCCCATGGATTTGGCATGGGCCAAGTGAAGCATGAGAATTTAGGGGATCTGGGATCAACTCACACCCTTCATCTCCCATTCATGGTAACGACCAAATGAAAGAACCCCCCCCCAATTAGCATCCATTGGGGGTAACAAGCAAACCCTGCTATCAGCACCCAGTGGCGATTTTGAGTGAATCCGAAATACCCCATTGTGTTAGCGACATGTTGTACTGTCACGTTGTACATATAGCAGTTAGTAATGCTCTAACCATTAGGCTAGTTTTGCTCATTATCTAGATGGCCAGGTAGTTTATGTGCCTGTGA TTTTTTTTTTTGCCTTTCCTTTTATTTTAACTCATCTATGAACCTGCCACATAGTGGGGTATGTTGTATCCCGGCATATGCATGCCTTTTGTTTTTAACCCCCTTTGAGAGTTTGGTACTTTGGTTGCATGTATTTTTGGCCGTGTATGCATATATGTATATGCGTGTGATTATGTATAGCTGTTTGCACAGGCTAACAAACAGTAGTTTGTATGGTAAATAATATGTGTCGTGTCCCCTCAAAAAAAAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||