cluster # 12268

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Oryza sativa
cluster # 12268 cluster # 12268 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12268#0 length = 987 sequences # 10
consensusID : consensus_12268#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 987
fasta sequence
                              [AAAGCTGTTCGTCTCCCCAACCCCAACCGCGACGAACTAGGGCGACGGGCCATCGCCGTCGTCGCCGCCGCCGCCGCAGCTCGCGCTCGCTCTCCTCCTCTGGCGCCGTTCCTCTTTCTCCTGCGTCGCCCCATCGACCTCGACCGCTCAGCGTCTGTTTGTAACTTTCTGTTATGGGTGACTACACCATCCAGATTAGCACCAAGCTAATCGACCAGCTTGCTCGTGATGACGAGAAGATCAAAAAGAAAACCA--GGAAA--CCCAAGCC--TAAGAAG-ACTGTCAAAC-AACA-TC-AA-CAAGAG-CCCCA-GGAC-AAC-TCAAGGGAACT--CCCAGCTTCTG--AACCCAAGGC-TCCTCCTGGCTGGCCACTGCAGCCT-CCCATGTATCTCCCCGTAACCCCTGCTCCTCCACCACCCCCACCTGCTTTTTCAGAGCTGGAAGCCATCCGTGCCGTTCTGGAAGAGAGCGAAAAGGTTCAGGAGAAGCTGGATAAGCAGCATGCTGG-GATGCGTGATGAACTCATCA-AGAAATCAAAAGACCTGCGTGACAAGGAGTTCAAGCTGCCGTACCAAAACCCCACGCCATGCACTGAGGAGAGGTCAAACTGCCGCCAGTGTTACGTGAGCAATGCACAGGACCCACTCAAGTGTGCTGAGGCAGTCAAGAGATTTGAAGCATGTGTTCGCCTGGCGAGGCAAAGGGGCAACACAAAAGTTGCTCAGTAGCCCTGGAAGATTTGTGATGAGGAAAGAACTGATATACGATTTTGCTTTGCTGTGATGATTTAATAACCTGGAATTTTGATGAGACCTAAGACATATTTCTACAATTCTAATGGCATCGCACCAGGCTAGGTGAGGAAGCTACAGATCCTTGAGTTTAGGGATTCTGTATTGCAAATATTGGGTAAAAATGAAACATGAATTCTGGGTGTTTTTCTCTGATTGGTATCATGAGTGAAAGCGTTATCCATAAAAAATCTATGCTGTTGCCATT]

[+] EMBL AK102829             [AAAGCTGTTCGTCTCCCCAACCCCAACCGCGACGAACTAGGGCGACGGGCCATCGCCGTCGTCGCCGCCGCCGCCGCAGCTCGCGCTCGCTCTCCTCCTCTGGCGCCGTTCCTCTTTCTCCTGCGTCGCCCCATCGACCTCGACCGCTCAGCGTCTGTTTGTAACTTTCTGTTATGGGTGACTACACCATCCAGATTAGCACCAAGCTAATCGACCAGCTTGCTCGTGATGACGAGAAGATCAAAAAGAAAACCA  GGAAA  CCCAAGCC  TAAGAAG ACTGTCAAAC AACA TC AA CAAGAG CCCCA GGAC AAC TCAAGGGAACT  CCCAGCTTCTG  AACCCAAGGC TCCTCCTGGCTGGCCACTGCAGCCT CCCATGTATCTCCCCGTAACCCCTGCTCCTCCACCACCCCCACCTGCTTTTTCAGAGCTGGAAGCCATCCGTGCCGTTCTGGAAGAGAGCGAAAAGGTTCAGGAGAAGCTGGATAAGCAGCATGCTGG GATGCGTGATGAACTCATCA AGAAATCAAAAGACCTGCGTGACAAGGAGTTCAAGCTGCCGTACCAAAACCCCACGCCATGCACTGAGGAGAGGTCAAACTGCCGCCAGTGTTACGTGAGCAATGCACAGGACCCACTCAAGTGTGCTGAGGCAGTCAAGAGATTTGAAGCATGTGTTCGCCTGGCGAGGCAAAGGGGCAACACAAAAGTTGCTCAGTAGCCCTGGAAGATTTGTGATGAGGAAAGAACTGATATACGATTTTGCTTTGCTGTGATGATTTAATAACCTGGAATTTTGATGAGACCTAAGACATATTTCTACAATTCTAATGGCATCGCACCAGGCTAGGTGAGGAAGCTACAGATCCTTGAGTTTAGGGATTCTGTATTGCAAATATTGGGTAAGAATGAAACATGAATGCTGGG                                                                 ]
[+] EMBL AK060306             [    CTGTTCGTCTCCCCAACCCCAACCGCGACGAACTAGGGCGACGGGCCATCGCCGTCGTCGCCGCCGCCGCCGCAGCTCGCGCTCGCTCTCCTCCTCTGGCGCCGTTCCTCTTTCTCCTGCGTCGCCCCATCGACCTCGACCGCTCAGCGTCTGTTTGTAACTTTCTGTTATGGGTGACTACACCATCCAGATTAGCACCAAGCTAATCGACCAGCTTGCTCGTGATGACGAGAAGATCAAAAAGAAAACCA  GGAAA  CCCAAGCC  TAAGAAG ACTGTCAAAC AACA TC AA CAAGAG CCCCA GGAC AAC TCAAGGGAACT  CCCAGCTTCTG  AACCCAAGGC TCCTCCTGGCTGGCCACTGCAGCCT CCCATGTATCTCCCCGTAACCCCTGCTCCTCCACCACCCCCACCTGCTTTTTCAGAGCTGGAAGCCATCCGTGCCGTTCTGGAAGAGAGCGAAAAGGTTCAGGAGAAGCTGGATAAGCAGCATGCTGG GATGCGTGATGAACTCATCA AGAAATCAAAAGACCTGCGTGACAAGGAGTTCAAGCTGCCGTACCAAAACCCCACGCCATGCACTGAGGAGAGGTCAAACTGCCGCCAGTGTTACGTGAGCAATGCACAGGACCCACTCAAGTGTGCTGAGGCAGTCAAGAGATTTGAAGCATGTGTTCGCCTGGCGAGGCAAAGGGGCAACACAAAAGTTGCTCAGTAGCCCTGGAAGATTTGTGATGAGGAAAGAACTGATATACGATTTTGCTTTGCTGTGATGATTTAATAACCTGGAATTTTGATGAGACCTAAGACATATTTCTACAATTCTAATGGCATCGCACCAGGCTAGGTGAGGAAGCTACAGATCCTTGAGTTTAGGGATTCTGTATTGCAAATATTGGGTAAAAATGAAACATGAATTCTGGGTGTTTTTCTCTGATTGGTATCATGAGTGAAAGCGTTATCCATACATAATCTATGCTGTTGCCATT]
[+] EMBL OSS12283A            [           TCTCCCCAACCCCAACCGCGACGAACTAGGGCGACGGGCCATCGCCGTCGTCGCCGCCGCCGCCGCAGCTCGCGCTCGCTCTCCTCCTCTGGCGCCGTTCCTCTTTCTCCTGCGTCGCCCCATCGACCTCGACCGCTCAGCGTCTGTTTGTAACTTTCTGTTATGGGTGACTACACCATCCAGATTAGCACCAAGCTAATCGACCAGCTTGCTCGTGATGACGAGAGGNTCAAAAAGGAAACCAGGGGAAA  CCCAAGCC  TAAGAAG GCNTTTAAACNACCA T  AA CNAGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSS12186A            [                 CAACCCCAACCGCGACGAACTAGGGCGACGGGCCATCGCCGTCGTCGCCGCCGCCGCCGCAGCTCGCGCTCGCTCTCCTCCTCTGGCGCCGTTCCTCTTTCTCCTGCGTCGCCCCATCGACCTCGACCGATCAGCGTCTGTTTGTAACTTTCTGTTATGGGTGACTACACCATCCAGATTAGCACCAAGCTAATCGACCAGCTTGCTCGTGATGACGAGAAGATCAAAAAGAAAACCA  GGAAA  CCCAAGNC  TAAGAAGAACTGTCAAAC AACA TT AA CAAGAG CCCCAGGGAC AAC TCAAGGGAACT  NCCAGCTTNTGGAAANCCAAGGC TTCTac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU083370             [                                                                                                                                                                                                                                                           ccgA  GGAAACCCCCAAGCCCTTAAGAAG ACTGTCAAAC AACATTC AACCAAGAGCCCCCA GGACAAACTTCAAGGGAATC  CCCAGCTTCTG  AACCCNAGGC TCCTCCTGGCTGGCCACTGCAGCCT CCCATGTATCTCCCCGTAACCCCTGCTCCTCCACCACCCCCACCTGCTTTTTCAGAGCTGGAAGCCATCCGTGCCGTTCTGGAAGAGAGCGAAAAGGTTCNGGAGAAGCTGGATAAGCAGCATGCTGG GATGCGTGATGAACTCATCA AGAAATCAAAAGACCTGCGTGACAAGGAGTTCAAGCTGCCGTACCAAAACCCCACGCCATGCACTGAGGAGAGGTCAAACTGCCGCCAGTGTTACGTGAGCAATGCACAGGACCCACTCAAGTGTGCTGAGGCAGTCAAGAGATTTGAAGCATGTGTTCGCCTGGCGAGGCAAAGGGGCAACACAAAAGTTGCTCAGTAGCCCTGGAAGATTTGTGATGAGGAAAGAACTGATATACGATTTTGCTTTGCTGTGATGATTTAATAACCTGGAATTTTGATGAGACCTAAGACATATTTCTACAATTCTAATGGCATCGCACCAGGCTAGGTGAGGAAGCTACAGATCCTTGAGTTTAGGGATTCTGTATTGCAAATATTGGGTAAAAATGAAACATGAATTCTGGGTGTTTTTCTCaaaaa                                                  ]
[+] EMBL AU062809             [                                                                                                                                                                                                                                                                           AAGCC  TAAGAAG ACTGTCAAAC AACA TC AA CAAGAG CCCCA GGAC AAC TCAAGGGAACT  CCCAGCTTCTG  AACCCAAGGC TCCTCCTGGCTGGCCACTGCAGCCT CCCATGTATCTCCCCGTAACCCCTGCTCCTCCACCACCCNCACCTGCTTTTTCAGAGCTGGAAGCCATCCGTGCCGTTCTGGAAGAGAGCGAAAAGGTTCAGGAGAAGCTGGNTAAGCAGCATGCTGG GATGCGTGATGAACTCATCA AGAAATCAAAAGACCTGCGTGACAAGGAGTTCAAGCTGCCGTACCAAAACCCNACGCC                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU062826             [                                                                                                                                                                                                                                                                           AAGCC  TAANAAG ACTGTCAAAC AACA TC AA CAAGAG CCCCA GGAC AAC TCAAGGGAACT  CCCAGCTTCTG  AACCCAAGGN TCCTCCTGGCTGGCCACTGCAGCCT CCCATGTNTCTCCCCGTAACCCCTGCTCCTCCACCACCCCCACCTGNTTTTTCAGAGCTGGAAGCCATCCGTGCCGTTTTGGAAGAGAGCGAAAAGGTTCAGGAGANGCTGGATAAGCAGCATGCTGGNGATGCNTGATGAACTCATCATGGNAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU092426             [                                                                                                                                                                                                                                                                                        G ACTGTCAAAC AACA TCAAA CAAGA  CCCCA GGAC AAC TCAAGGGAACTC CCCAGCTTCTG  AACCNAAGGC TCCTCCTGGCTGGCCACTGCAGCCT CCCATGTATCTCCCCGTAACCCCTGCTCCTCCACCACCCCCACCTGCTTTTTCAGAGCTGGAAGCCATCCGTGCCGTTCTGGAAGAGAGCGAAAAGGTTCAGGAGAAGCTGGATAAGCAGCATGCTGG GATGCGTGATGAACTCATCA AGAAATCAAAAGACCTGCGTGACAAGGAGTTCAAGCTGCCGTACCAAAACCCCACGCCATGCACTGAGGAGAGGTCAAACTGCCGCCAGTGTTACGTGAGCAATGCACAGGACCCACTCAAGTGTGCTGAGGCAGTCAAGAGATTTGAAGCATGTGTTCGCCTGGCGAGGCAAAGGGGCAACACAAAAGTTGCTCAGTAGCCCTGGAAGATTTGTGATGAGGAAAGAACTGATATACGATTTTGCTTTGCTGTGATGATTTAATAACCTGGAATTTTGATGAGACCTAAGACATATTTCTACAATTCTAATGGCATCGCACCAGGCTAGGTGAGGAAGCTACAGATCCTTGAGTTTAGGGATTCTGTATTGCAAATATTGGGTAAAAATGAAACATGAATTCTGGGTGTTTTTCTCaaaaa                                                  ]
[+] EMBL AU096112             [                                                                                                                                                                                                                                                                                                              A CAAGAG CCCCA GGAC ANC TCAAGGGAACTCCCCCAGCTTCTG  AACCCAAGGCTTCCTCCTGGCTGGCCACTGCAGCCTCCCCATGTATCTCCCCGTAACCCCTGCTCCTCCACCACCCCCACCTGCTTTTTCAGAGCTGGAAGCCATCCGTGCCGTTCTGGAAGAGAGCGAAAAGGTTCAGGAGAAGCTGGATAAGCAGCATGCTGG GATGCGTGATGAACTCATCA AGAAATCAAAAGACCTGCGTGACAAGGAGTTCAAGCTGCCGTACCAAAACCCCACGCCATGCACTGAGGAGAGGTCAAACTGCCGCCAGTGTTACGTGAGCAATGCACAGGACCCACTCAAGTGTGCTGAGGCAGTCAAGAGATTTGAAGCATGTGTTCGCCTGGCGAGGCAAAGGGGCAACACNAAAGTTGCTCAGTAGCCCTGGAAGATTTGTGATGAGGAAAGAACTGATATACGATTTTGCTTTGCTGTGATGATTTAATAACCTGGAATTTTGATGAGACCTAAGACATATTTCTACAATTCTAATGGCATCGCACCAGGCTAGGTGAGGAAGCTACAGATCCTTGAGTTTAGGGATTCTGTATTGCAAATATTGGGTAAAAATGAAACATGAATTCTGGGTGTTTTTCTCTGATTGGTATCATGAGTGAAAGCGTTATCCATAAAAA                  ]
[+] EMBL AU096149             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGAAGAGANCGAAAAGGTTCAGGAGAAGCTGGATAAGCAGCATGCTGG GATGCGTGATGAACTCATCA AGAAATCAAAAGACCTGCGTGACAAGGAGTTCAAGCTGCCGTACCAAANCCCCACGCCATGCNCTGAGGAGAGGTCAAACTNCCGCCAGTGTTACGTGAGCAATGCACAGGACCCACTCAAGTGTGCTGAGGCAGTCAAGAGATTTGAAGCATGTGTTCGCNTGGCGAGGCAAAGGGGCAACACNAAAGTTGCTCAGTAGCCCTGGAAGATTTGTGATGAGGAAAGAACTGATATACGATTTTGCTTTGCTGTGATGATTTAATAACCTGGAATTTTGATGAGACCTAAGACATATTTCTACAATTCTAATGGCATCGCACCAGGCTAGGTGAGGAAGCTACAGATCCTTGAGTTTAGGGATTCTGTATTGCAAATATTGGGTAAAAATGAAACATGAATTCTGGGTGTTTTTCTCTGATTGGTATCATGAGTGAAAGCGTTATCCATAAAAA                  ]




>consensus_12268#0
AAAGCTGTTCGTCTCCCCAACCCCAACCGCGACGAACTAGGGCGACGGGCCATCGCCGTC
GTCGCCGCCGCCGCCGCAGCTCGCGCTCGCTCTCCTCCTCTGGCGCCGTTCCTCTTTCTC
CTGCGTCGCCCCATCGACCTCGACCGCTCAGCGTCTGTTTGTAACTTTCTGTTATGGGTG
ACTACACCATCCAGATTAGCACCAAGCTAATCGACCAGCTTGCTCGTGATGACGAGAAGA
TCAAAAAGAAAACCAGGAAACCCAAGCCTAAGAAGACTGTCAAACAACATCAACAAGAGC
CCCAGGACAACTCAAGGGAACTCCCAGCTTCTGAACCCAAGGCTCCTCCTGGCTGGCCAC
TGCAGCCTCCCATGTATCTCCCCGTAACCCCTGCTCCTCCACCACCCCCACCTGCTTTTT
CAGAGCTGGAAGCCATCCGTGCCGTTCTGGAAGAGAGCGAAAAGGTTCAGGAGAAGCTGG
ATAAGCAGCATGCTGGGATGCGTGATGAACTCATCAAGAAATCAAAAGACCTGCGTGACA
AGGAGTTCAAGCTGCCGTACCAAAACCCCACGCCATGCACTGAGGAGAGGTCAAACTGCC
GCCAGTGTTACGTGAGCAATGCACAGGACCCACTCAAGTGTGCTGAGGCAGTCAAGAGAT
TTGAAGCATGTGTTCGCCTGGCGAGGCAAAGGGGCAACACAAAAGTTGCTCAGTAGCCCT
GGAAGATTTGTGATGAGGAAAGAACTGATATACGATTTTGCTTTGCTGTGATGATTTAAT
AACCTGGAATTTTGATGAGACCTAAGACATATTTCTACAATTCTAATGGCATCGCACCAG
GCTAGGTGAGGAAGCTACAGATCCTTGAGTTTAGGGATTCTGTATTGCAAATATTGGGTA
AAAATGAAACATGAATTCTGGGTGTTTTTCTCTGATTGGTATCATGAGTGAAAGCGTTAT
CCATAAAAAATCTATGCTGTTGCCATT
clustalw multiple alignements is not computed in this case