cluster # 12279

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Oryza sativa
cluster # 12279 cluster # 12279 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12279#0 length = 1800 sequences # 4
consensus_12279#1 length = 894 sequences # 2

consensus_12279#2 length = 743 sequences # 3
consensus_12279#3 length = 511 sequences # 1

consensusID : consensus_12279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1800
fasta sequence

                              [TTCCCTCCCATCGCCGACATGCCTAGGAAGGAGCGCGACAGCGAGAGCAGCCGCCGCCGGCGGCGGCGGCGGCAGCGCAGCCGGTCGCCGTCCGACTCGGAGGAAGCCTCCGACTCCAGCGGCTCGCCGCGGCGGAGCCGGAGCCGGAACCGCCGCAAGAGCCGCCGGAGGGACACCCCTTCGTCCAGCGACGCGAGCGATTCCCAGGCGTCGGACTCCGGGTCGGACTCCGGCGGCCGGGTCCGGAGGAGGAGCGGAAGCCGGAAGAAGGGGGAGGTCACCGAAGAGCAGATCGTGGAGTACATGGCTAAGAAGGCGCAGAAGAAGGCAGAGAAGGTAGCGAAGAAGATGAAGGCGAATGCTGTGTCGGGGTACTCCAATGACTCGAACCCCTTTGGCGATCCCAACCTGACCGAGAAATTTGTTTGGCGAAAGAAGATTGAGCGTGATGTATCTCAAGGGCAAAAGGTGGACATTTCTGTTAAAGGTGAAAAGAAGAAACAGAGAGAAAGAATGGCTGAAATAGAGAAGGTTAAGAAAAGAAGGGAGGAAAGAGCGATCGAAAAGGCACAGCATGAGGAGGAAATGGCATTGTTAGCCAGAGAAAGAGCACGCGCTGAGTTTCAGGATTGGGAGAAGAAAGAGGAAGAGTTTCATTTTGATCAAAGCAAAGTTAGATCTGAGATCAGGTTACGCGAGGGGCGCACAAAACCTATTGATGTTCTCCTGAAGAATCTCAATTTCTCAGAAGAATTTGATGTTGAGTTAAACGAGCCCTACTTGGTATTCAAGGGATTAACGGTGAAGGAAATGGAAGAGCTGCGCGATGACATTAAGATGCATCTTGATCTGGACAGGGAAAGCCAAATAAATGTCAAATACTGGGAGGCACTCATGGTGGTATGTGACTGGGAGCTAGGTGAGGCTCGGAAAAGAGATGCCTTGGATCGGGCTAGGGTGCGTGGTGAGGAACCACCTCCTGATGTTCTTGCGGAAGAGAGGGGCTTACATGCAAGTATTGAGGGTGATGTAAAGGATCTTTTGGAGGGTAAGACTTCCACAGAACTAGAAGAGATGCAAAGTCAAATTGAGTCCCAAATGCGCTCTGGAACAGCAAAAGTTGTTGAATACTGGATATGAGTGGAACAAATACAACCAGACTCACTATGACCACGACAACCCCCCACCGAAAATCGTCCAGGGCTACAAGTTCAATATATTTTACCCTGACCTGGTGGATAAATCAAAGGCGCCAACATACACGATAGAGAAAGACGGGAGCACCGGTGAGACATGCCTCATAAGATTCCATGCGGGCCCTCCATATGAGGATATAGCTTTCCGTATTGTCAACAAGGAGTGGGAATACTCACATAAGAAGGGCTTCAAGTGCACATTCGAACGTGGGATTCTCCACCTCTATTTCAACTTCAAGCGCTACCGCTACAGGCGATAAAATGCCACGCAAGGAAGACGTTTTGATCTCCA-TTGTGCTGTTAGAAGTTGGTCTTGCTTTTCTTACCTGAGAGCCCTATGCAAATAGGTTTGCTCGGATACCAACTCTGGAGTCGACTACACATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTACTTATGCTGATTAGGCTCTTTGTTAGCGGTTTGAAAATAGCAACGAAGTCTCCTGTGTACATTGTAACTTCCTTTTTTCTGCTTTGGAAATTGAGTTCAGATGTCAAAAATCAACACATCTTTTTGGTGGCAATCAACTAATAGTGCGTATATCAAAAAAAAA]

[+] EMBL AK063420             [TTCCCTCCCATCGCCGACATGCCTAGGAAGGAGCGCGACAGCGAGAGCAGCCGCCGCCGGCGGCGGCGGCGGCAGCGCAGCCGGTCGCCGTCCGACTCGGAGGAAGCCTCCGACTCCAGCGGCTCGCCGCGGCGGAGCCGGAGCCGGAACCGCCGCAAGAGCCGCCGGAGGGACACCCCTTCGTCCAGCGACGCGAGCGATTCCCAGGCGTCGGACTCCGGGTCGGACTCCGGCGGCCGGGTCCGGAGGAGGAGCGGAAGCCGGAAGAAGGGGGAGGTCACCGAAGAGCAGATCGTGGAGTACATGGCTAAGAAGGCGCAGAAGAAGGCAGAGAAGGTAGCGAAGAAGATGAAGGCGAATGCTGTGTCGGGGTACTCCAATGACTCGAACCCCTTTGGCGATCCCAACCTGACCGAGAAATTTGTTTGGCGAAAGAAGATTGAGCGTGATGTATCTCAAGGGCAAAAGGTGGACATTTCTGTTAAAGGTGAAAAGAAGAAACAGAGAGAAAGAATGGCTGAAATAGAGAAGGTTAAGAAAAGAAGGGAGGAAAGAGCGATCGAAAAGGCACAGCATGAGGAGGAAATGGCATTGTTAGCCAGAGAAAGAGCACGCGCTGAGTTTCAGGATTGGGAGAAGAAAGAGGAAGAGTTTCATTTTGATCAAAGCAAAGTTAGATCTGAGATCAGGTTACGCGAGGGGCGCACAAAACCTATTGATGTTCTCCTGAAGAATCTCAATTTCTCAGAAGAATTTGATGTTGAGTTAAACGAGCCCTACTTGGTATTCAAGGGATTAACGGTGAAGGAAATGGAAGAGCTGCGCGATGACATTAAGATGCATCTTGATCTGGACAGGGAAAGCCAAATAAATGTCAAATACTGGGAGGCACTCATGGTGGTATGTGACTGGGAGCTAGGTGAGGCTCGGAAAAGAGATGCCTTGGATCGGGCTAGGGTGCGTGGTGAGGAACCACCTCCTGATGTTCTTGCGGAAGAGAGGGGCTTACATGCAAGTATTGAGGGTGATGTAAAGGATCTTTTGGAGGGTAAGACTTCCACAGAACTAGAAGAGATGCAAAGTCAAATTGAGTCCCAAATGCGCTCTGGAACAGCAAAAGTTGTTGAATACTGGATATGAGTGGAACAAATACAACCAGACTCACTATGACCACGACAACCCCCCACCGAAAATCGTCCAGGGCTACAAGTTCAATATATTTTACCCTGACCTGGTGGATAAATCAAAGGCGCCAACATACACGATAGAGAAAGACGGGAGCACCGGTGAGACATGCCTCATAAGATTCCATGCGGGCCCTCCATATGAGGATATAGCTTTCCGTATTGTCAACAAGGAGTGGGAATACTCACATAAGAAGGGCTTCAAGTGCACATTCGAACGTGGGATTCTCCACCTCTATTTCAACTTCAAGCGCTACCGCTACAGGCGATAAAATGCCACGCAAGGAAGACGTTTTGATCTCCA TTGTGCTGTTAGAAGTTGGTCTTGCTTTTCTTACCTGAGAGCCCTATGCAAATAGGTTTGCTCGGATACCAACTCTGGAGTCGACTACACATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTACTTATGCTGATTAGGCTCTTTGTTAGCGGTTTGAAAATAGCAACGAAGTCTCCTGTGTACATTGTAACTTCCTTTTTTCTGCTTTGGAAATTGAGTTCAGAT                                                             ]
[+] EMBL CB676778             [                 CATGCCTTGGAAGGAGCGCGACAGCGAGAGCAGCCGCCGCCGGCGGCGGCGGCGGCAGCGCAGCCGGTCGCCGTCCGACTCGGAGGAAGCCTCCGACTCCAGCGGCTCGCCGCGGCGGAGCCGGAGCCGGAACCGCCGCAAGAGCCGCCGGAGGGACACCCCTTCGTCCAGCGACGCGAGCGATTCCCAGGCGTCGGACTCCGGGTCGGACTCCGGCGGCCGGGTCCGGAGGAGGAGCGGAAGCCGGAAGAAGGGGGAGGTCACCGAAGAGCAGATCGTGGAGTACATGGCTAAGAAGGCGCAGAAGAAGGCAGAGAAGGTAGCGAAGAAGATGAAGGCGAATGCTGTGTCGGGGTACTCCAATGACTCGAACCCCTTTGGCGATCCCAACCTGACCGAGAAATTTGTTTGGCGAAAGAAGATTGAGCGTGATGTATCTCAAGGGCAAAAGGTGGACATTTCTGTTAAAGGTGAAAAGAAGAAACAGAGAGAAAGAATGGCTGAAATAGAGAAGGTTAAGAAAAGAAGGGAGGAAAGAGCGATCGAAAAGGCACAGCATGAGGAGGAAATGGCATTGTTAGCCAGAGAAAGAGCACGCGCTGAGTTTCAGGATTGGGAGAAGAAAGAGGAAGAGTTTCATTTTGATCAAAGCAAAGTTAGATCTGAGATCAGGTTACGCGAGGGGCGCACAAAACCTATTGATGTTCTCCTGAAGAATCTCAATTTCTCAGAAGAATTTGATGTTGAGTTAAACGAGCCCTACTTGGTATTCAAGGGATTAACGGTGAAGGAAATGGAAGAGCTGCGCGATGACATTAAGATGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB641840             [                  ATGCCTAGGAAGGAGCGCGACAGCGAGAGCAGCCGCCGCCGGCGGCGGCGGCGGCAGCGCAGCCGGTCGCCGTCCGACTCGGAGGAAGCCTCCGACTCCAGCGGCTCGCCGCGGCGGAGCCGGAGCCGGAACCGCCGCAAGAGCCGCCGGAGGGACACCCCTTCGTCCAGCGACGCGAGCGATTCCCAGGCGTCGGACTCCGGGTCGGACTCCGGCGGCCGGGTCCGGAGGAGGAGCGGAAGCCGGAAGAAGGGGGAGGTCACCGAAGAGCAGATCGTGGAGTACATGGCTAAGAAGGCGCAGAAGAAGGCAGAGAAGGTAGCGAAGAAGATGAAGGCGAATGCTGTGTCGGGGTACTCCAATGACTCGAACCCCTTTGGCGATCCCAACCTGACCGAGAAATTTGTTTGGCGAAAGAAGATTGAGCGTGATGTATCTCAAGGGCAAAAGGTGGACATTTCTGTTAAAGGTGAAAAGAAGAAACAGAGAGAAAGAATGGCTGAAATAGAGAAGGTTAAGAAAAGAAGGGAGGAAAGAGCGATCGAAAAGGCACAGCATGAGGAGGAAATGGCATTGTTAGCCAGAGAAAGAGCACGCGCTGAGTTTCAGGATTGGGAGAAGAAAGAGGAAGAGTTTCATTTTGATCAAAGCAAAGTTAGATCTGAGATCAGGTTACGCGAGGGGCGCACAAAACCTATTGATGTTCTCCTGAAGAATCTCAATTTCTCAGAAGAATTTGATGTTGAGTTAAACGAGCCCTACTTGGTATTCAAGGGATTAACGGTGAAGGAAATGGAAGAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM421260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTCCATGCGGGCCCTCCATATGAGGATATAGCTTTCCGTA TGTCAACAAGGAGTGGGAATACTCACATAAGAAGGGCTTCAAGTGCACATTCGAACGTGGGATTCTCCACCTCTATTTCAACTTCAAGCGCTACCGCTACAGGCGATAAAATGCCACGCAAGGAAGACGTTTTGATCTCCACTTGTGCTGTTAGAAGTTGGTCTTGCTTTTCTTACCTGAGAGCCCTATGCAAATAGGTTTGCTCGGATACCAACTCTGGAGTCGACTACACATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTACTTATGCTGATTAGGCTCTTTGTTAGCGGTTTGAAAATAGCAACGAAGTCTCCTGTGTACATTGTAACTTCCTTTTTTCTGCTTTGGAAATTGAGTTCAGATGTCAAAAATCAACACATCTTTTTGGTGGCAATCAACTAATAGTGCGTATATCAAAAAAAAA]




>consensus_12279#0
TTCCCTCCCATCGCCGACATGCCTAGGAAGGAGCGCGACAGCGAGAGCAGCCGCCGCCGG
CGGCGGCGGCGGCAGCGCAGCCGGTCGCCGTCCGACTCGGAGGAAGCCTCCGACTCCAGC
GGCTCGCCGCGGCGGAGCCGGAGCCGGAACCGCCGCAAGAGCCGCCGGAGGGACACCCCT
TCGTCCAGCGACGCGAGCGATTCCCAGGCGTCGGACTCCGGGTCGGACTCCGGCGGCCGG
GTCCGGAGGAGGAGCGGAAGCCGGAAGAAGGGGGAGGTCACCGAAGAGCAGATCGTGGAG
TACATGGCTAAGAAGGCGCAGAAGAAGGCAGAGAAGGTAGCGAAGAAGATGAAGGCGAAT
GCTGTGTCGGGGTACTCCAATGACTCGAACCCCTTTGGCGATCCCAACCTGACCGAGAAA
TTTGTTTGGCGAAAGAAGATTGAGCGTGATGTATCTCAAGGGCAAAAGGTGGACATTTCT
GTTAAAGGTGAAAAGAAGAAACAGAGAGAAAGAATGGCTGAAATAGAGAAGGTTAAGAAA
AGAAGGGAGGAAAGAGCGATCGAAAAGGCACAGCATGAGGAGGAAATGGCATTGTTAGCC
AGAGAAAGAGCACGCGCTGAGTTTCAGGATTGGGAGAAGAAAGAGGAAGAGTTTCATTTT
GATCAAAGCAAAGTTAGATCTGAGATCAGGTTACGCGAGGGGCGCACAAAACCTATTGAT
GTTCTCCTGAAGAATCTCAATTTCTCAGAAGAATTTGATGTTGAGTTAAACGAGCCCTAC
TTGGTATTCAAGGGATTAACGGTGAAGGAAATGGAAGAGCTGCGCGATGACATTAAGATG
CATCTTGATCTGGACAGGGAAAGCCAAATAAATGTCAAATACTGGGAGGCACTCATGGTG
GTATGTGACTGGGAGCTAGGTGAGGCTCGGAAAAGAGATGCCTTGGATCGGGCTAGGGTG
CGTGGTGAGGAACCACCTCCTGATGTTCTTGCGGAAGAGAGGGGCTTACATGCAAGTATT
GAGGGTGATGTAAAGGATCTTTTGGAGGGTAAGACTTCCACAGAACTAGAAGAGATGCAA
AGTCAAATTGAGTCCCAAATGCGCTCTGGAACAGCAAAAGTTGTTGAATACTGGATATGA
GTGGAACAAATACAACCAGACTCACTATGACCACGACAACCCCCCACCGAAAATCGTCCA
GGGCTACAAGTTCAATATATTTTACCCTGACCTGGTGGATAAATCAAAGGCGCCAACATA
CACGATAGAGAAAGACGGGAGCACCGGTGAGACATGCCTCATAAGATTCCATGCGGGCCC
TCCATATGAGGATATAGCTTTCCGTATTGTCAACAAGGAGTGGGAATACTCACATAAGAA
GGGCTTCAAGTGCACATTCGAACGTGGGATTCTCCACCTCTATTTCAACTTCAAGCGCTA
CCGCTACAGGCGATAAAATGCCACGCAAGGAAGACGTTTTGATCTCCATTGTGCTGTTAG
AAGTTGGTCTTGCTTTTCTTACCTGAGAGCCCTATGCAAATAGGTTTGCTCGGATACCAA
CTCTGGAGTCGACTACACATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAG
CATACTAGCATCCCGTACTTATGCTGATTAGGCTCTTTGTTAGCGGTTTGAAAATAGCAA
CGAAGTCTCCTGTGTACATTGTAACTTCCTTTTTTCTGCTTTGGAAATTGAGTTCAGATG
TCAAAAATCAACACATCTTTTTGGTGGCAATCAACTAATAGTGCGTATATCAAAAAAAAA

consensusID : consensus_12279#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 894
fasta sequence

                              [GAAGAAAGAGGAAGAGTTTCATTTTGATCAAAGCAAAGTTAGATCTGAGATCAGGTTACGCGAGGGGCGCACAAAACCTATTGATGTTCTCCTGAAGAATCTCAATTTCTCAGAAGAATTTGATGTTGAGTTAAACGAGCCCTACTTGGTATTCAAGGGATTAACGGTGAAGGAAATGGAAGAGCTGCGCGATGACATTAAGATGCATCTTGATCTGGACAGGGAAAGCCAAATAAATGTCAAATACTGGGAGGCACTCATGGTGGTATGTGACTGGGAGCTAGGTGAGGCTCGGAAAAGATATGCCTTGGATCGGGCTAGGGTGCGTGGTGAGGAACCACCTCCTGATGTTCTTGCGGAAGAGAGGGGCTTACATGCAAGTATTGAGGGTGATGTAAAGGATCTTTTGGAGGGTAAGACTTCCACAGAACTAGAAGAGATGCAAAGTCAAATTGAGTCCCAAATGCGCTCTGGAACAGCAAAAGTTGTTGAATACTGGGAGGCCATTCTGAGACGCCTTCATATTTACAAAGCAAAGGCTTGCCTGAGGGAAATCCATGCTTCGATCTTACGGAAGCATCTACATCGTCTGGAGCATCCTGATTCCATTGAGCAGGATAAGGAATCTGAGGATGAAATCGATGCTAAAGAGAAGGATGCAACACATATTGAC---GATGATGATGATGACGATGAAGATGATAAGCGATATTCGNCTGAACCTATAGCGGAGCAAACAGAGAGTCATTTTGGATGAAGAANACGGATNCCTTTTCTNCTGAGCTAATGCATGGCAATGAAGATGAANATGCCANTTGATTCCTGAGGAGGACAAGGCAGAACTGGATCGAAAACGNGAAGCTGTAGTNTTGGGCATCAAAAGNAAGTTCAGCAGGC]

[+] EMBL CA764325             [GAAGAAAGAGGAAGAGTTTCATTTTGATCAAAGCAAAGTTAGATCTGAGATCAGGTTACGCGAGGGGCGCACAAAACCTATTGATGTTCTCCTGAAGAATCTCAATTTCTCAGAAGAATTTGATGTTGAGTTAAACGAGCCCTACTTGGTATTCAAGGGATTAACGGTGAAGGAAATGGAAGAGCTGCGCGATGACATTAAGATGCATCTTGATCTGGACAGGGAAAGCCAAATAAATGTCAAATACTGGGAGGCACTCATGGTGGTATGTGACTGGGAGCTAGGTGAGGCTCGGAAAAGATATGCCTTGGATCGGGCTAGGGTGCGTGGTGAGGAACCACCTCCTGATGTTCTTGCGGAAGAGAGGGGCTTACATGCAAGTATTGAGGGTGATGTAAAGGATCTTTTGGAGGGTAAGACTTCCACAGAACTAGAAGAGATGCAAAGTCAAATTGAGTCCCAAATGCGCTCTGGAACAGCAAAAGTTGTTGAATACTGGGAGGCCATTCTGAGACGCCTTCATATTTACAAAGCAAAGGCTTGCCTGAGGGAAATCCATGCTTCGATCTTACGGAAGCATCTACATCGTCTGGAGCATCCTGATTCCATTGAGCAGGATAAGGAATCTGAGGATGAAATCGATGCTAAAGAGAAGGATGCAACACATATTGAC   GATGATGATGATGACGATGAAGATGATAAGCGATATTCGNCTGAACCTATAGCGGAGCAAACAGAGAGTCATTTTGGATGAAGAANACGGATNCCTTTTCTNCTGAGCTAATGCATGGCAATGAAGATGAANATGCCANTTGATTCCTGAGGAGGACAAGGCAGAACTGGATCGAAAACGNGAAGCTGTAGTNTTGGGCATCAAAAGNAAGTTCAGCAGGC]
[+] EMBL AU062506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAATTGAGTCCCAAATGCGCTCTGGAACAGCAAAAGTTGTTGAATACTGGGAGGCCATTCTGAAACGCCTTCATATTTACAAAGCAAAGGCTTGCCTGAGGGAAATCCATGNTTCGATCTTACGGAAGCATCTACATNGTCTGGAGCATCCTGATTCCATTGAGCAGGATAAGGAATCTGAGGATGAAATCGATGCTAAAGAGAAGGATGCAACACATATTGACGATGATGATGATGATGATGATGAAGATGATAAGCGATATTCGCCTGAACCTATAGCGGANCAAACAGAGAGTCA TTTGGATGAAGAAGACGGAT CCTTTTCTCCTGAGCTAATGCATGGCAATNAAGATGAAGATG CAATTGA TCCTGAGGAGGACAAGGCAGAACTGGATCGAAAACGTGAAGCTG                                 ]




>consensus_12279#1
GAAGAAAGAGGAAGAGTTTCATTTTGATCAAAGCAAAGTTAGATCTGAGATCAGGTTACG
CGAGGGGCGCACAAAACCTATTGATGTTCTCCTGAAGAATCTCAATTTCTCAGAAGAATT
TGATGTTGAGTTAAACGAGCCCTACTTGGTATTCAAGGGATTAACGGTGAAGGAAATGGA
AGAGCTGCGCGATGACATTAAGATGCATCTTGATCTGGACAGGGAAAGCCAAATAAATGT
CAAATACTGGGAGGCACTCATGGTGGTATGTGACTGGGAGCTAGGTGAGGCTCGGAAAAG
ATATGCCTTGGATCGGGCTAGGGTGCGTGGTGAGGAACCACCTCCTGATGTTCTTGCGGA
AGAGAGGGGCTTACATGCAAGTATTGAGGGTGATGTAAAGGATCTTTTGGAGGGTAAGAC
TTCCACAGAACTAGAAGAGATGCAAAGTCAAATTGAGTCCCAAATGCGCTCTGGAACAGC
AAAAGTTGTTGAATACTGGGAGGCCATTCTGAGACGCCTTCATATTTACAAAGCAAAGGC
TTGCCTGAGGGAAATCCATGCTTCGATCTTACGGAAGCATCTACATCGTCTGGAGCATCC
TGATTCCATTGAGCAGGATAAGGAATCTGAGGATGAAATCGATGCTAAAGAGAAGGATGC
AACACATATTGACGATGATGATGATGACGATGAAGATGATAAGCGATATTCGNCTGAACC
TATAGCGGAGCAAACAGAGAGTCATTTTGGATGAAGAANACGGATNCCTTTTCTNCTGAG
CTAATGCATGGCAATGAAGATGAANATGCCANTTGATTCCTGAGGAGGACAAGGCAGAAC
TGGATCGAAAACGNGAAGCTGTAGTNTTGGGCATCAAAAGNAAGTTCAGCAGGC

consensusID : consensus_12279#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 743
fasta sequence

                              [GATTCACAGGTATATTGGTGGCACGACAAGTATCGACCAAG-AAAACCGAAGTACTTCAATCGGGTGCATACTGGATATGAGTGGAACAAATACAACCAGACTCACTATGACCACGACAACCCCCCACCGAAAATCGT-CCAGGGCTACAAGTTCAATATATTTTACCCTGACCTGGTGGATAAATCAAAGGCGCCAACATACACGATAGAGAAAGACGGGAGCACCGGTGAGACATGCCTCATAAGATTCCATGCGGGCCCTCCATATGAGGATATAGCTTTCCGTATTGTCAACAAGGAGTGGGAATACTCACATAAGAAGGGCTTCAAGTGCACATTCGAACGTGGGATTCTCCACCTCTATTTCAACTTCAAGCGCTACCGCTACAGGCGATAAAATGCCACGCAAGGAAGACGTTTTGATCTCCATTGTGCTGTTAGAAGTTGGTCTTGCTTTTCTTACCTGAGAGCCCTATGCAAATAGGTTTGCTCGGATACCAACTCTGGAGTCGACTACACATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTACTTATGCTGATTAGGCTCTTTGTTAGCGGTTTGAAAATAGCAACGAAGTCTCCTGTGTACATTGTAACTTCCTTTTTTCTGCTTTGGAAATTGAGTTCAGATGTCAAAAATCAACACATCTTTTTGGTGGCAATCAAACTAATAGGGGGTATATCATTAAACTTCT]

[-] EMBL CB641841             [GATTCACAGGTATATTGGTGGCACGACAAGTATCGACCAAG AAAACCGAAGTACTTCAATCGGGTGCATACTGGATATGAGTGGAACAAATACAACCAGACTCACTATGACCACGACAACCCCCCACCGAAAATCGT CCAGGGCTACAAGTTCAATATATTTTACCCTGACCTGGTGGATAAATCAAAGGCGCCAACATACACGATAGAGAAAGACGGGAGCACCGGTGAGACATGCCTCATAAGATTCCATGCGGGCCCTCCATATGAGGATATAGCTTTCCGTATTGTCAACAAGGAGTGGGAATACTCACATAAGAAGGGCTTCAAGTGCACATTCGAACGTGGGATTCTCCACCTCTATTTCAACTTCAAGCGCTACCGCTACAGGCGATAAAATGCCACGCAAGGAAGACGTTTTGATCTCCATTGTGCTGTTAGAAGTTGGTCTTGCTTTTCTTACCTGAGAGCCCTATGCAAATAGGTTTGCTCGGATACCAACTCTGGAGTCGACTACACATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTACTTATGCTGATTAGGCTCTTTGTTAGCGGTTTGAAAATAGCAACGAAGTCTCCTGTGTACATTGTAACTTCCTTTTTTCTGCTTTGGAAATTGAGTTCAGATGTCAAAAATCAACACATCTTTTTGGTGGCAATCAAACTAATAGGGGGTATATCATTAAACTTCT]
[+] EMBL AU100656             [   cacCAGGTATATTGNTGGCACGACAATTTTCGACNAAGAAAAACCGAAGTATTTCAATCGGNTGCATACTGNATATGAGTGGAACAAATCCAACCAGANTCACTATGCCCACGACAACCCCCCACCGAAAATCNTCCCAGGGCTACAAGTTCAATATATTTTACCCTGACCTGGTGGATAAATCAAAGGCGCCAACATACACGATAGAGAAAGACGGGAGCACCGNTGAGACATGCCTCATAAGATTCCATGCGGGCCCTCCATATGAGGATATAGCTTNCCGTATTGTCAACAAGGANTGGGAATACTCNCATAAGAAGGGCTTCAAGTGCACATTCGAACGTGGGATTCTCCACCTCTATTTCAACTTCAAGCGCTACCGCTACAGGCGATAAAATGCCACGCAAGGAAGACGTTTTGATCNCCATTGTGCTGTTAGAAGTTGGTCTTGCTTTTCTTNCCTGAGAGCCCTATGCAAATAGGTTTGCTCGGATACCAACTCTGGAGTCGACTACACATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTACTTATGCTGATTAGGCTCTTTGTTAGCGGTTTGAAAATAGCAACGAAGTCTCCTGTGTACATTGTAACTTCCTTTTTTCTGCTTTGGAAATTGAGTTCAGATGTCAAAAAaaaa                                                    ]
[+] EMBL BI800225             [                                                                                                                                                                                                                                                                                                                                                                                                                            AAGACGTTTTGATCTCCATTGTGCTGTTAGAAGTTGGTCTTGCTTTTCTTACCTGAGAGCCCTATGCAAATAGGTTTGCTCGGATACCAACTCTGGAGTCGACTACACATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTACTTATGCTGATTAGGCTCTTTGTTA CGGTTTGAAAATAGCAACGAAGTCTCCTGTGTACATTGTAACTTCCTTTTTTCTGCTTTGGAAATTGAGTTCAGATGTCAAAAATC                                                      ]




>consensus_12279#2
GATTCACAGGTATATTGGTGGCACGACAAGTATCGACCAAGAAAACCGAAGTACTTCAAT
CGGGTGCATACTGGATATGAGTGGAACAAATACAACCAGACTCACTATGACCACGACAAC
CCCCCACCGAAAATCGTCCAGGGCTACAAGTTCAATATATTTTACCCTGACCTGGTGGAT
AAATCAAAGGCGCCAACATACACGATAGAGAAAGACGGGAGCACCGGTGAGACATGCCTC
ATAAGATTCCATGCGGGCCCTCCATATGAGGATATAGCTTTCCGTATTGTCAACAAGGAG
TGGGAATACTCACATAAGAAGGGCTTCAAGTGCACATTCGAACGTGGGATTCTCCACCTC
TATTTCAACTTCAAGCGCTACCGCTACAGGCGATAAAATGCCACGCAAGGAAGACGTTTT
GATCTCCATTGTGCTGTTAGAAGTTGGTCTTGCTTTTCTTACCTGAGAGCCCTATGCAAA
TAGGTTTGCTCGGATACCAACTCTGGAGTCGACTACACATGCTCATCCGAGATCATATGT
ACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTACTTATGCTGATTAGGCTCTTTGT
TAGCGGTTTGAAAATAGCAACGAAGTCTCCTGTGTACATTGTAACTTCCTTTTTTCTGCT
TTGGAAATTGAGTTCAGATGTCAAAAATCAACACATCTTTTTGGTGGCAATCAAACTAAT
AGGGGGTATATCATTAAACTTCT

consensusID : consensus_12279#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 511
fasta sequence

                              [CGAGGAGCAGATCGTGGAGTACATGGCTAAGAAGGCGCAGAAGAAGGTATTGGGGCGGTGGAGGTTCGGGTTTTCCGTTTGGTTGGCTCCATTGTTGCGGCTAGGGTTTTGATTTCTAACTAACTTGTTGATGGTGGTGGTGGCTGTGCAGGCAGAGAAGGTAGCGAAGAAGATGAAGGCGAATGCTGTGTCGGGGTACTCCAATGACTCGAACCCCTTTGGCGATCCCAACCTGACCGAGAAGTACGCGAATTCGTCCCCCTCTCCTGCCACATTATTCGTTCCATTAGTGGTGTTGCTTAGCTAAGTAGAAATTTGGGCTGAAATTTGTTTGAACTGTGTCACGGATGACATAAACAGGAGGCCAAAAGTTACACTTCCCTTGTTTGTTTGATGCCCTAAAATTGTGTGCAGATTGATGATTACTGTCATTTATTTACATTAGTAAGGCTTGAGCTTACTTATTGATCACTTCATTTTGACACCTACAGCCACCAAGGATACATATATC]

[+] EMBL CB096650             [CGAGGAGCAGATCGTGGAGTACATGGCTAAGAAGGCGCAGAAGAAGGTATTGGGGCGGTGGAGGTTCGGGTTTTCCGTTTGGTTGGCTCCATTGTTGCGGCTAGGGTTTTGATTTCTAACTAACTTGTTGATGGTGGTGGTGGCTGTGCAGGCAGAGAAGGTAGCGAAGAAGATGAAGGCGAATGCTGTGTCGGGGTACTCCAATGACTCGAACCCCTTTGGCGATCCCAACCTGACCGAGAAGTACGCGAATTCGTCCCCCTCTCCTGCCACATTATTCGTTCCATTAGTGGTGTTGCTTAGCTAAGTAGAAATTTGGGCTGAAATTTGTTTGAACTGTGTCACGGATGACATAAACAGGAGGCCAAAAGTTACACTTCCCTTGTTTGTTTGATGCCCTAAAATTGTGTGCAGATTGATGATTACTGTCATTTATTTACATTAGTAAGGCTTGAGCTTACTTATTGATCACTTCATTTTGACACCTACAGCCACCAAGGATACATATATC]




>consensus_12279#3
CGAGGAGCAGATCGTGGAGTACATGGCTAAGAAGGCGCAGAAGAAGGTATTGGGGCGGTG
GAGGTTCGGGTTTTCCGTTTGGTTGGCTCCATTGTTGCGGCTAGGGTTTTGATTTCTAAC
TAACTTGTTGATGGTGGTGGTGGCTGTGCAGGCAGAGAAGGTAGCGAAGAAGATGAAGGC
GAATGCTGTGTCGGGGTACTCCAATGACTCGAACCCCTTTGGCGATCCCAACCTGACCGA
GAAGTACGCGAATTCGTCCCCCTCTCCTGCCACATTATTCGTTCCATTAGTGGTGTTGCT
TAGCTAAGTAGAAATTTGGGCTGAAATTTGTTTGAACTGTGTCACGGATGACATAAACAG
GAGGCCAAAAGTTACACTTCCCTTGTTTGTTTGATGCCCTAAAATTGTGTGCAGATTGAT
GATTACTGTCATTTATTTACATTAGTAAGGCTTGAGCTTACTTATTGATCACTTCATTTT
GACACCTACAGCCACCAAGGATACATATATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12279#0      TTCCCTCCCATCGCCGACATGCCTAGGAAGGAGCGCGACAGCGAGAGCAGCCGCCGCCGG 60
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      CGGCGGCGGCGGCAGCGCAGCCGGTCGCCGTCCGACTCGGAGGAAGCCTCCGACTCCAGC 120
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GGCTCGCCGCGGCGGAGCCGGAGCCGGAACCGCCGCAAGAGCCGCCGGAGGGACACCCCT 180
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      TCGTCCAGCGACGCGAGCGATTCCCAGGCGTCGGACTCCGGGTCGGACTCCGGCGGCCGG 240
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GTCCGGAGGAGGAGCGGAAGCCGGAAGAAGGGGGAGGTCACCGAAGAGCAGATCGTGGAG 300
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      TACATGGCTAAGAAGGCGCAGAAGAAGGCAGAGAAGGTAGCGAAGAAGATGAAGGCGAAT 360
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GCTGTGTCGGGGTACTCCAATGACTCGAACCCCTTTGGCGATCCCAACCTGACCGAGAAA 420
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      TTTGTTTGGCGAAAGAAGATTGAGCGTGATGTATCTCAAGGGCAAAAGGTGGACATTTCT 480
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GTTAAAGGTGAAAAGAAGAAACAGAGAGAAAGAATGGCTGAAATAGAGAAGGTTAAGAAA 540
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      AGAAGGGAGGAAAGAGCGATCGAAAAGGCACAGCATGAGGAGGAAATGGCATTGTTAGCC 600
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      AGAGAAAGAGCACGCGCTGAGTTTCAGGATTGGGAGAAGAAAGAGGAAGAGTTTCATTTT 660
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GATCAAAGCAAAGTTAGATCTGAGATCAGGTTACGCGAGGGGCGCACAAAACCTATTGAT 720
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GTTCTCCTGAAGAATCTCAATTTCTCAGAAGAATTTGATGTTGAGTTAAACGAGCCCTAC 780
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      TTGGTATTCAAGGGATTAACGGTGAAGGAAATGGAAGAGCTGCGCGATGACATTAAGATG 840
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      CATCTTGATCTGGACAGGGAAAGCCAAATAAATGTCAAATACTGGGAGGCACTCATGGTG 900
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GTATGTGACTGGGAGCTAGGTGAGGCTCGGAAAAGAGATGCCTTGGATCGGGCTAGGGTG 960
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      CGTGGTGAGGAACCACCTCCTGATGTTCTTGCGGAAGAGAGGGGCTTACATGCAAGTATT 1020
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      ------------------------------------------------------------
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GAGGGTGATGTAAAGGATCTTTTGGAGGGTAAGACTTCCACAGAACTAGAAGAGATGCAA 1080
consensus_12279#2      ----------------------------------GATTCACAGGTATATTGGTGGCACGA 26
consensus_12279#1      -----GAAGAAAGAGGAAGAGTTTCATTTTGATCAAAGCAAAGTTAGATCTGAGATCAGG 55
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      AGTCAAATTGAGTCCCAAATGCGCTCTGGAACAGCAAAAGTTGTTGA--ATACTGGATAT 1138
consensus_12279#2      ---CAAGTATCGACCAAGA---AAACCGAAGTACTTCAATCGGGTGC--ATACTGGATAT 78
consensus_12279#1      TTACGCGAGGGGCGCACAAAACCTATTGATGTTCTCCTGAAGAATCTCAATTTCTCAGAA 115
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GAGTGGAACA---AATACAACCAGACTCACTATGACCACGACAACCCCCCACCGAAAATC 1195
consensus_12279#2      GAGTGGAACA---AATACAACCAGACTCACTATGACCACGACAACCCCCCACCGAAAATC 135
consensus_12279#1      GAATTTGATGTTGAGTTAAACGAGCCCTACTTGGTATTCAAGGGATTAACGGTGAAGGAA 175
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GTCCAGG-GCTACAAGTT--CAATATATTTTACCCTGACCTGGT--GGATAAATCAAA-- 1248
consensus_12279#2      GTCCAGG-GCTACAAGTT--CAATATATTTTACCCTGACCTGGT--GGATAAATCAAA-- 188
consensus_12279#1      ATGGAAGAGCTGCGCGATGACATTAAGATGCATCTTGATCTGGACAGGGAAAGCCAAATA 235
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      GGCGCCAA-----------CATACACGATAGAGAAAGACGGGAGCACCGGTGAGACATGC 1297
consensus_12279#2      GGCGCCAA-----------CATACACGATAGAGAAAGACGGGAGCACCGGTGAGACATGC 237
consensus_12279#1      AATGTCAAATACTGGGAGGCACTCATGGTGGTATGTGACTGGGAGCTAGGTGAGGCTCGG 295
consensus_12279#3      ------------------------------------------------------------
                                                                                   

consensus_12279#0      CTCA--TAAGATTCCATGCGGGCCC---TCCATA-TGAGGATATAGCTTTCCGTATTGTC 1351
consensus_12279#2      CTCA--TAAGATTCCATGCGGGCCC---TCCATA-TGAGGATATAGCTTTCCGTATTGTC 291
consensus_12279#1      AAAAGATATGCCTTGGATCGGGCTAGGGTGCGTGGTGAGGAACCACCTCCTGATGTTCTT 355
consensus_12279#3      --------------------------------CGAGGAGCAGATCGTGGAGTACATGGCT 28
                                                           *** *              *    

consensus_12279#0      AACAAGGAGTGGGA----ATACTCACATAAGAAGGGCT---TCAAGTGCACATTCGAACG 1404
consensus_12279#2      AACAAGGAGTGGGA----ATACTCACATAAGAAGGGCT---TCAAGTGCACATTCGAACG 344
consensus_12279#1      GCGGAAGAGAGGGGCTT-ACATGCAAGTATTGAGGGTGATGTAAAGGATCTTTTGGAGGG 414
consensus_12279#3      AAGAAGGCGCAGAAGAAGGTATTGGGGCGGTGGAGGTT--CGGGTTTTCCGTTTGGTTGG 86
                           * * *  *        *             **                ** *   *

consensus_12279#0      TGGGATTCTC-CACCTCTATTTCAACTTCAAGCGCTACCGCTACAGGCGATAAAATGCCA 1463
consensus_12279#2      TGGGATTCTC-CACCTCTATTTCAACTTCAAGCGCTACCGCTACAGGCGATAAAATGCCA 403
consensus_12279#1      TAAGACTTCCACAGAACTAGAAGAGATGCAAAGTCAA---ATTGAGTCCCAAATGCGCTC 471
consensus_12279#3      CTCCATTGTTGCGGCTAGGGTTTTGATTTCTAACTAACTTGTTGATGGTGGTGGTGGCTG 146
                           * *    *              *         *    *  *           **  

consensus_12279#0      CGCAA--GGAAGACGTTTTGATCTCCATTGTGCTG--TTAGAAGTTGGTCTTGCTTTTCT 1519
consensus_12279#2      CGCAA--GGAAGACGTTTTGATCTCCATTGTGCTG--TTAGAAGTTGGTCTTGCTTTTCT 459
consensus_12279#1      TGGAACAGCAAAAGTTGTTGAATACTGGGAGGCCA--TTCTGAGACGCCTTCATATTTAC 529
consensus_12279#3      TGCAGGCAGAGAAGGTAGCGAAGAAGATGAAGGCGAATGCTGTGTCGGGGT-ACTCCAAT 205
                        * *     *  *  *   **          *     *     *  *   *         

consensus_12279#0      TACCTGAGAGCCCTATGCAAATAGGTT--TGCTCGGATACCAACTCTGGAGTCGACTACA 1577
consensus_12279#2      TACCTGAGAGCCCTATGCAAATAGGTT--TGCTCGGATACCAACTCTGGAGTCGACTACA 517
consensus_12279#1      AAAGCAAAGGCTTGCCTGAGGGAAATCCATGCTTCGATCTTA----CGGAAGCATCTACA 585
consensus_12279#3      GACTCGAACCCCTTTGGCGATCCCAACC-TGACCGAGAAGTA--CGCGAATTCGTCCCCC 262
                        *    *   *                  **          *     * *  *  *  * 

consensus_12279#0      CATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTA 1637
consensus_12279#2      CATGCTCATCCGAGATCATATGTACTAAGTGAGAACAGGGTAGCATACTAGCATCCCGTA 577
consensus_12279#1      TCGTCTGGAGCATCCTGAT-TCCATTGAGCAGGATAAGGAATCTGAGGATGAAATCGATG 644
consensus_12279#3      TCTCCTGCCACATTATTCGTTCCATT-AGTGGTGTT-GCTTAGCTAAGTAGAAATTTGGG 320
                           **    *    *    *  * * **        *            * *       

consensus_12279#0      CTTATGCTGATTAGGC--TCTTTGTTAGCGGTT-TGAAAATAGCAACGAAGTCTCCTGTG 1694
consensus_12279#2      CTTATGCTGATTAGGC--TCTTTGTTAGCGGTT-TGAAAATAGCAACGAAGTCTCCTGTG 634
consensus_12279#1      CTAAAGAGAAGGATGCAACACATATTGACGATGATGATGATGACGATGAAGATGATAAGC 704
consensus_12279#3      CTGAAATTTGTTTGAA---CTGTGTCACGGATGACATAAACA-----GGAGGCCAAAAGT 372
                       ** *                  * *    * *       *       * **         

consensus_12279#0      TACATTGTAACTTCCTTTTTTCTGCTT---TGGAAATTGAGTTCAGAT-GTCAAAAATCA 1750
consensus_12279#2      TACATTGTAACTTCCTTTTTTCTGCTT---TGGAAATTGAGTTCAGAT-GTCAAAAATCA 690
consensus_12279#1      GATATTCGNCTGAACCTATAGCGGAGCAAACAGAGAGTCATTTTGGAT-GAAGAANACGG 763
consensus_12279#3      TACACTTCCCTTGTTTGTTTGATGCCC----TAAAATTGTGTGCAGATTGATGATTACTG 428
                        * * *            *    *         * * *   *   *** *   *  *   

consensus_12279#0      ACACATCTTTTTGGTGGC-AAT-CAA-CTAATAGTGC---GTATATCAAAAAAAAA---- 1800
consensus_12279#2      ACACATCTTTTTGGTGGC-AAT-CAAACTAATAGGGG---GTATATCATTAAACTTCT-- 743
consensus_12279#1      ATNCCTTTTCTNCTGAGCTAATGCATGGCAATGAAGATGAANATGCCANTTGATTCCTGA 823
consensus_12279#3      TCATTTATTTACATTAGTAAGGCTTGAGCTTACTTATTGATCACTTCATTTTGACACCTA 488
                            * **       *  *                      *   **            

consensus_12279#0      ------------------------------------------------------------
consensus_12279#2      ------------------------------------------------------------
consensus_12279#1      GGAGGACAAGGCAGAACTGGATCGAAAACGNGAAGCTGTAGTNTTGGGCATCAAAAGNAA 883
consensus_12279#3      CAGCCACCAAGGATACATATATC------------------------------------- 511
                                                                                   

consensus_12279#0      -----------
consensus_12279#2      -----------
consensus_12279#1      GTTCAGCAGGC 894
consensus_12279#3      -----------