These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12280#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2532 fasta sequence [CCCTAGCTCCCGCCGCCGCCGCCGCCGCGCTGTTCCGGGATGGCCGGCGCCGCCGCGCTCCGGCGATCCGCGCGCCGTGTCGTCCTGCCAGGCGCCTACGCCTTGTCCCGGGCGCTACAGCACCCTGAGCGCCTCCTCTCCTCCCAGGCTTCGCCGGACCGCGGCGGGGTGCTGGGTTCGGAGCTTGGGCTGTATCCCCCGGAGAGGGTCAGGAACTTCTCCATCATCGCGCACGTCGACCACGGCAAGTCCACGCTCGCCGACCGGTTGCTGGAGCTCACCGGCACCATCAAGAAGGGCCATGGCCAACCTCAGTACCTCGACAAGTTACAGGTAGAGAGAGAGAGGGGAATCACAGTCAAAGCACAAACAGCAACTATGTTCTACAGACATGCTAACAACCAACTTCCTGCATCTGATCAGCCAGATGCTCCAAGCTATTTGCTTAACTTGATTGATACTCCTGAGCATGTGGATTTCAGCTACGAAGTATCCAGGTCGCTTGCAGCTTGTCAGGGTGCTCTTTTAGTAGTTAATGCAGCCCAAGGTGTCCAAGCACAAACAATTGCAAACTTCTACCTTGCATTTGAGTCGAATCTAAGCATCATTCCTGTTATTAATAAGATTGATCAGCCTACCGCTGATCCAGATAATGTAAAGGCTCAACTGAAGAGGTTATTTGACATTGATCCAAGTGAAGCTCTGCTAACTTCAGCTAAAACTGGTCAGGGCCTTAGCCAGGTCTTGCCTGCTGTTATTGAGCGGATTCCTTCCCCACCTGGAAAATGTGATTCACCTGTACGCATGCTTCTCTTAGATTCATACTATGATGAGTATAAAGGGGTGATATGCCATGTTGCTGTTGTGGATGGTGCTCTCCACAAAGGAGATAAGATTGCATCTGCCGCAACTGGTCGCACATATGAAGTCCTTGATGTGGGCATTATGCATCCAGAGCTTACTCCTAC-CGGTGTGCTTTACACTGGACAAGTTGGATATGTCATAAGCGGAATGCGTTCAACTAAAGAAGCACGAATTGGTGATACTCTTCATCAAGCAAAGAGTATTGTCGAACCACTTCCTGGTTTCAAGCCTGCTAGACACATGGTCTTCTCTGGTCTATACCCAGCTGATGGCTCTGACTCTGACGCTCTTAGCCATGCAATTGAAAAACTAACATGTAACGATGCGAGTGTGTCTGTTACAAAAGAGACAAGCACTGCACTTGGCATGGGCTTCAGATGTGGCTTTCTAGGATTACTACACATGGATGTATTTCATCAGCGGCTAGAACAAGAACATGGAGCTCAAGTCATATCGACAATACCGACAGTGCCATATATCTTTGAGTATGGTGATGGAAGCAAAGTGCAAGTCGAGAACCCTGCAGCTTTGGCTTCAAATCCTGGAAAGCGTATAGCAGCTTGTTGGGAACCAACAGTCATTGCAACTATTATTATTCCTAGTGAGTATGTTGGGCCAGTAATTATGCTTTGTTCAGAGAGGAGGGGCGAGCAGCAAGAATATACATTCA-TTGATG-CCCAAAGGGC-TTTGTTGAAGTA-CCGATTA-CCATT--GAGGGAAATCATT-GTGGA-TTTCTACAAT-GAACT-GAAAAG-CATAACATCT-GGATATG-CTA-CTTTT-GATTATG-AAGATTCTGAGTACCAACAGTCTGATCTTGTTAAGATGGATATTTTACTTAATGGTCAGCCTGTTGATGCTATGGCAA-CAATAGTCCACAACCAGAAAGCT-CAGAGAGTT-GGACGAGAATTAGTGGATAAACTCAAGAAATTCATAGAACGGCAAATGTTTGAGATCACTATA-CAAGCCGCAGTTGGTTCAAAGGTTAT-CGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACG-TTCTGG-CCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGCTTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGAAACACAAACAGCATGTTCTGGACTTCTAGTCATCTTCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGTTTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATTTTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTCGGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCACAGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGTTAAGAAC-TTTTTGGGAGGAAAATATTCCAGAGATAGTAA-GTCCTTTTTTTTTGGGCAATGTTAAAAAAAAAGGTATTTCCCTTTGAGCTTCTCTAGTTCTGTTTAATGCAATTTTGTAATTTTGTAACTCTTCTGCTGCATGGTGTAAACTT] [+] EMBL AK103630 [CCCTAGCTCCCGCCGCCGCCGCCGCCGCGCTGTTCCGGGATGGCCGGCGCCGCCGCGCTCCGGCGATCCGCGCGCCGTGTCGTCCTGCCAGGCGCCTACGCCTTGTCCCGGGCGCTACAGCACCCTGAGCGCCTCCTCTCCTCCCAGGCTTCGCCGGACCGCGGCGGGGTGCTGGGTTCGGAGCTTGGGCTGTATCCCCCGGAGAGGGTCAGGAACTTCTCCATCATCGCGCACGTCGACCACGGCAAGTCCACGCTCGCCGACCGGTTGCTGGAGCTCACCGGCACCATCAAGAAGGGCCATGGCCAACCTCAGTACCTCGACAAGTTACAGGTAGAGAGAGAGAGGGGAATCACAGTCAAAGCACAAACAGCAACTATGTTCTACAGACATGCTAACAACCAACTTCCTGCATCTGATCAGCCAGATGCTCCAAGCTATTTGCTTAACTTGATTGATACTCCTGAGCATGTGGATTTCAGCTACGAAGTATCCAGGTCGCTTGCAGCTTGTCAGGGTGCTCTTTTAGTAGTTAATGCAGCCCAAGGTGTCCAAGCACAAACAATTGCAAACTTCTACCTTGCATTTGAGTCGAATCTAAGCATCATTCCTGTTATTAATAAGATTGATCAGCCTACCGCTGATCCAGATAATGTAAAGGCTCAACTGAAGAGGTTATTTGACATTGATCCAAGTGAAGCTCTGCTAACTTCAGCTAAAACTGGTCAGGGCCTTAGCCAGGTCTTGCCTGCTGTTATTGAGCGGATTCCTTCCCCACCTGGAAAATGTGATTCACCTGTACGCATGCTTCTCTTAGATTCATACTATGATGAGTATAAAGGGGTGATATGCCATGTTGCTGTTGTGGATGGTGCTCTCCACAAAGGAGATAAGATTGCATCTGCCGCAACTGGTCGCACATATGAAGTCCTTGATGTGGGCATTATGCATCCAGAGCTTACTCCTAC CGGTGTGCTTTACACTGGACAAGTTGGATATGTCATAAGCGGAATGCGTTCAACTAAAGAAGCACGAATTGGTGATACTCTTCATCAAGCAAAGAGTATTGTCGAACCACTTCCTGGTTTCAAGCCTGCTAGACACATGGTCTTCTCTGGTCTATACCCAGCTGATGGCTCTGACTCTGACGCTCTTAGCCATGCAATTGAAAAACTAACATGTAACGATGCGAGTGTGTCTGTTACAAAAGAGACAAGCACTGCACTTGGCATGGGCTTCAGATGTGGCTTTCTAGGATTACTACACATGGATGTATTTCATCAGCGGCTAGAACAAGAACATGGAGCTCAAGTCATATCGACAATACCGACAGTGCCATATATCTTTGAGTATGGTGATGGAAGCAAAGTGCAAGTCGAGAACCCTGCAGCTTTGGCTTCAAATCCTGGAAAGCGTATAGCAGCTTGTTGGGAACCAACAGTCATTGCAACTGTTATTATTCCTAGTGAGTATGTTGGGCCAGTAATTATGCTTTGTTCAGAGAGGAGGGGCGAGCAGCAAGAATATACATTCA TTGATG CCCAAAGGGC TTTGTTGAAGTA CCGATTA CCATT GAGGGAAATCATT GTGGA TTTCTACAAT GAACT GAAAAG CATAACATCT GGATATG CTA CTTTT GATTATG AAGATTCTGAGTACCAACAGTCTGATCTTGTTAAGATGGATATTTTACTTAATGGTCAGCCTGTTGATGCTATGGCAA CAATAGTCCACAACCAGAAAGCT CAGAGAGTT GGACGAGAATTAGTGGATAAACTCAAGAAATTCATAGAACGGCAAATGTTTGAGATCACTATA CAAGCCGCAGTTGGTTCAAAGGTTAT CGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACG TTCTGG CCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGCTTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGAAACACAAACAGCATGTTCTGGACTTCTAGTCATCTTCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGTTTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATTTTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTCGGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCACAGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGTTAAGAAC T ] [+] EMBL CF323078 [ CAAACTTCTACCTTGCATTTGAGTCGAATCTAAGCATCATTCCTGTTATTAATAAGATTGATCAGCCTACCGCTGATCCAGATAATGTAAAGGCTCAACTGAAGAGGTTATTTGACATTGATCCAAGTGAAGCTCTGCTAACTTCAGCTAAAACTGGTCAGGGCCTTAGCCAGGTCTTGCCTGCTGTTATTGAGCGGATTCCTTCCCCACCTGGAAAATGTGATTCACCTGTACGCATGCTTCTCTTAGATTCATACTATGATGAGTATAAAGGGGTGATATGCCATGTTGCTGTTGTGGATGGTGCTCTCCACAAAGGAGATAAGATTGCATCTGCCGCAACTGGTCGCACATATGAAGTCCTTGATGTGGGCATTATGCATCCAGAGCTTACTCCTACNCGGTGTGCTTTACACTGGACAAGTTGGATATGTCATAAGCGGAATGCGTTCAACTAAAGAAGCACGAATTGGTGATACTCTTCATCAAGCAAAGAGTATTGTCGAACCACTTCCTGGTTT ] [+] EMBL CA766077 [ TGTGGATGGTGCTCTCCACAAAGGAGATAAGATTGCATCTGCCGCAACTGGTCGCACATATGAAGTCCTTGATGTGGGCATTATGCATCAAGAGCTTACTCCTAC CGGTGTGCTTTACACTGGACAAGTTGGATATGTCATAAGCGGAATGCGTTCAACTAAAGAAGCACGAATTGGTGATACTCTTCATCAAGCAAAGAGTATTGTCGAACCACTTCCTGGTTTCAAGCCTGCTAGACACATGGTCTTCTCTGGTCTATACCCAGCTGATGGCTCTGACTTTGACGCTCTTAGCCATGCAATTGAAAAACTAACATGTAACGATGCGAGTGTGTCTGTTACAAAAGAGACAAGCACTGCACTTGGCATGGGCTTCAGATGTGGCTTTCTAGGATTACTACACATGGATGTATTTCATCAGCGGCTAGAACAAGAACATGGAGCTCAAGTCATATCGACAATACCGACAGTGCCATATATCTTTGAGTATGGTGATGGAAGCAAAGTGCAAGTCGAGAACCCTGCAGCTTTGGCTTCAAATCCTGGAAAGCGTATAGCAGCTTGTTGGGAACCAACAGTCATTGCAACTATTATTATTCCT AGTATGNTGGGCCAGTAATTATGCTTTGNTCAGAGAGGAGGGGCGAGCAGCAAGAATATACATTCATTTGATGNCCCAAAGGGCNTTTGNTGAAGTACCCGATTANCCATTGGGGGGGAAATCATTGGGGGATTTTCTACAATGGAACTGGAAAAGCCTTAACATCTNGGATATGCCTACCTTTTGGATTATGAAAAATTCTGGGT ] [+] EMBL AU032084 [ GCAAGTCGAGAACCCTGCAGCTTTGGCTTCAAATCCTGGAAAGCGTATAGCAGCTTGTTGGGAACCAACAGTCATTGCAACTATTATTATTCCTAGTGAGTATGTTGGGCCAGTAATTATGCTTTGTTCAGAGAGGAGGGGCGAGCAGCAAGAATATACATTCA TTGATG CCCAAAGGGC TTTGTTGAAGTA CCGATTA CCATT GAGGGAAATCATT GTGGA TTTCTACAAT GAACT GAAAAG CATAACATCT GGATATG CTA CTTTT GATTATG AAGATTCTGAGTACCAACAGTCTGATCTTGTTAAGATGGATATTTTACTTAATGGTCAGCCTGTTGATGCTATGGCAACCAATAGTCCACNACCAGAAAGCTCCAGAGAGTTGGGACGAGAATAAGTGGATAANCTCc ] [+] EMBL CB663215 [ AAGTCGAGAACCCTGCAGCTTTGGCTTCAAATCCTGGAAAGCGTATAGCAGCTTGTTGGGAACCAACAGTCATTGCAACTATTATTATTCCT AGTATGTTGGGCCAGTAATTATGCTTTGTTCAGAGAGGAGGGGCGAGCAGCAAGAATATACATTCA TTGATG CCCAAAGGGC TTTGTTGAAGTA CCGATTA CCATT GAGGGAAATCATT GTGGA TTTCTACAAT GAACT GAAAAG CATAACATCT GGATATG CTA CTTTT GATTATG AAGATTCTGAGTACCAACAGTCTGATCTTGTTAAGATGGATATTTTACTTAATGGTCAGCCTGTTGATGCTATGGCAA CAATAGTCCACAACCAGAAAGCT CAGAGAGTT GGACGAGAATTAGTGGATAAACTCAAGAAATTCATAGAACGGCAAATGTTTGAGATCACTATA CAAGCCGCAGTTGGTTCAAAGGTTAT CGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACG TTCTGG CCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGCTTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGAAACACAAACAGCATGTTCTGGACTTCTAGTCATCTTCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGTTTCTTAATGATAAGAGGAGAACAAGCACCATTTTGCCATCTTTTGCTGTGGCAACA ] [+] EMBL CA766401 [ ggggcACCCGAAAGCT AGGAGAGTT GGACGAGAATT GTGGAT AACT AAGAAATT ATAGAACGGCAAATGTTTGAGATCACTATA CAAGCCGCAGTTGGTTCAAAGGTTAT CGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACG TTCTGG CCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGCTTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGAAACACAAACAGCATGTTCTGGACTTCTAGTCATCTTCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGTTTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATTTTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTCGGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCACAGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGGTAAGAACTTTTTTNGGAGGAAAATATTCCAGAGATAGTAANGTCCCTTTTTTTT ] [-] EMBL CA760039 [ CGAGAATTAGTGGATAAACTCAAGAAATTCATAGAACGGCAAATGTTTGAGATCACTATA CAAGCCGCAGTTGGTTCAAAGGTTAT CGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACG TTCTGG CCAAGTGCTATGGTGGTGATATTACTCGCAAAGAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGCTTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGAAACACAAACAGCATGTTCTGGACTTCTAGTCATCTTCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGTTTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATTTTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTCGGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCACAGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGTTAAGAAC TTTTTGGGAGGAAAATATTCCAGAGATAGTAA GTCCTTTTTTTTTGGGCAATGTTAAAAAAAAA ] [+] EMBL CB000451 [ GAGAATTAGTGGATAAACTCAAGAAATTCATACATCGGCAAATGTTTGAGATCACTATA CAAGCCGCAGTTGGTTCAAAGGTTAT CGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACG TTCTGG CCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGCTTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGAAACACAAACAGCATGTTCTGGACTTCTAGTCATCTTCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGTTTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATTTTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTCGGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCACAGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGTTAAGAAC TTTTTGGGAGGAAAATATTCCAGAGATAGTAA GTCCTTTTTTTTTGGGCAATGTTAAATAATTGGGTATTTCCCTTTGAGCTTCTCTAGTTCTGTTTAATGCAATTTTGTAATTTTGTAACTCTTCTGCTGCATGGTGTAAACTT] [+] EMBL AU162490 [ GAGATCACTTTACCAAGCCNCATTTGGTTCAAAGGTTATCCGCNAGGGAAACTCTGTCAGCAATGNGAAAGANCGTTTCTGGCCCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGCTTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGAAACACAAACAGCATGTTCTGGACTTCTAGTCATCTTCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGTTTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATTTTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTCGGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCACAGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGTTAAGAAC TTTTTGGGAGGAAAATATTCCAGAGATAGTAA GTCC TTTTTTTTGGGCAATGTTAAAAAAAAAaaa ] consensusID : consensus_12280#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence [TCACTATACAAGCCGCAGTTGGTTCAAAGGTTATCGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACGTTCTGGCCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGCTTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGGAACACAAACAGCATGTTCTGGACTTCTAGTCATCTCCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGTTTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATTTTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTCGGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCACAGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGTTAAGAACTTTTTGGGAGGAAAATATTCCAGAGATAGTAAGTCCTTTTTTTTTGGGCAATGGTAAATAATTGGGTATTTCCCTTTGAGCTTCAAAAAAAAAA] [+] EMBL CB096683 [TCACTATACAAGCCGCAGTTGGTTCAAAGGTTATCGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACGTTCTGGCCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGCTTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGGAACACAAACAGCATGTTCTGGACTTCTAGTCATCTCCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGTTTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATTTTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTCGGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCACAGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGTTAAGAACTTTTTGGGAGGAAAATATTCCAGAGATAGTAAGTCCTTTTTTTTTGGGCAATGGTAAATAATTGGGTATTTCCCTTTGAGCTTCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12280#0 CCCTAGCTCCCGCCGCCGCCGCCGCCGCGCTGTTCCGGGATGGCCGGCGCCGCCGCGCTC 60 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 CGGCGATCCGCGCGCCGTGTCGTCCTGCCAGGCGCCTACGCCTTGTCCCGGGCGCTACAG 120 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 CACCCTGAGCGCCTCCTCTCCTCCCAGGCTTCGCCGGACCGCGGCGGGGTGCTGGGTTCG 180 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 GAGCTTGGGCTGTATCCCCCGGAGAGGGTCAGGAACTTCTCCATCATCGCGCACGTCGAC 240 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 CACGGCAAGTCCACGCTCGCCGACCGGTTGCTGGAGCTCACCGGCACCATCAAGAAGGGC 300 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 CATGGCCAACCTCAGTACCTCGACAAGTTACAGGTAGAGAGAGAGAGGGGAATCACAGTC 360 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 AAAGCACAAACAGCAACTATGTTCTACAGACATGCTAACAACCAACTTCCTGCATCTGAT 420 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 CAGCCAGATGCTCCAAGCTATTTGCTTAACTTGATTGATACTCCTGAGCATGTGGATTTC 480 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 AGCTACGAAGTATCCAGGTCGCTTGCAGCTTGTCAGGGTGCTCTTTTAGTAGTTAATGCA 540 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 GCCCAAGGTGTCCAAGCACAAACAATTGCAAACTTCTACCTTGCATTTGAGTCGAATCTA 600 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 AGCATCATTCCTGTTATTAATAAGATTGATCAGCCTACCGCTGATCCAGATAATGTAAAG 660 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 GCTCAACTGAAGAGGTTATTTGACATTGATCCAAGTGAAGCTCTGCTAACTTCAGCTAAA 720 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 ACTGGTCAGGGCCTTAGCCAGGTCTTGCCTGCTGTTATTGAGCGGATTCCTTCCCCACCT 780 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 GGAAAATGTGATTCACCTGTACGCATGCTTCTCTTAGATTCATACTATGATGAGTATAAA 840 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 GGGGTGATATGCCATGTTGCTGTTGTGGATGGTGCTCTCCACAAAGGAGATAAGATTGCA 900 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 TCTGCCGCAACTGGTCGCACATATGAAGTCCTTGATGTGGGCATTATGCATCCAGAGCTT 960 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 ACTCCTACCGGTGTGCTTTACACTGGACAAGTTGGATATGTCATAAGCGGAATGCGTTCA 1020 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 ACTAAAGAAGCACGAATTGGTGATACTCTTCATCAAGCAAAGAGTATTGTCGAACCACTT 1080 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 CCTGGTTTCAAGCCTGCTAGACACATGGTCTTCTCTGGTCTATACCCAGCTGATGGCTCT 1140 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 GACTCTGACGCTCTTAGCCATGCAATTGAAAAACTAACATGTAACGATGCGAGTGTGTCT 1200 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 GTTACAAAAGAGACAAGCACTGCACTTGGCATGGGCTTCAGATGTGGCTTTCTAGGATTA 1260 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 CTACACATGGATGTATTTCATCAGCGGCTAGAACAAGAACATGGAGCTCAAGTCATATCG 1320 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 ACAATACCGACAGTGCCATATATCTTTGAGTATGGTGATGGAAGCAAAGTGCAAGTCGAG 1380 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 AACCCTGCAGCTTTGGCTTCAAATCCTGGAAAGCGTATAGCAGCTTGTTGGGAACCAACA 1440 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 GTCATTGCAACTATTATTATTCCTAGTGAGTATGTTGGGCCAGTAATTATGCTTTGTTCA 1500 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 GAGAGGAGGGGCGAGCAGCAAGAATATACATTCATTGATGCCCAAAGGGCTTTGTTGAAG 1560 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 TACCGATTACCATTGAGGGAAATCATTGTGGATTTCTACAATGAACTGAAAAGCATAACA 1620 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 TCTGGATATGCTACTTTTGATTATGAAGATTCTGAGTACCAACAGTCTGATCTTGTTAAG 1680 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 ATGGATATTTTACTTAATGGTCAGCCTGTTGATGCTATGGCAACAATAGTCCACAACCAG 1740 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 AAAGCTCAGAGAGTTGGACGAGAATTAGTGGATAAACTCAAGAAATTCATAGAACGGCAA 1800 consensus_12280#1 ------------------------------------------------------------ consensus_12280#0 ATGTTTGAGATCACTATACAAGCCGCAGTTGGTTCAAAGGTTATCGCAAGGGAAACTCTG 1860 consensus_12280#1 ----------TCACTATACAAGCCGCAGTTGGTTCAAAGGTTATCGCAAGGGAAACTCTG 50 ************************************************** consensus_12280#0 TCAGCAATGAGAAAGAACGTTCTGGCCAAGTGCTATGGTGGTGATATTACTCGCAAAAAG 1920 consensus_12280#1 TCAGCAATGAGAAAGAACGTTCTGGCCAAGTGCTATGGTGGTGATATTACTCGCAAAAAG 110 ************************************************************ consensus_12280#0 AAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGAT 1980 consensus_12280#1 AAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGAT 170 ************************************************************ consensus_12280#0 ATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGC 2040 consensus_12280#1 ATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAGATGCTGTGC 230 ************************************************************ consensus_12280#0 TTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGAAACACAAACAGCATGT 2100 consensus_12280#1 TTAGTGCTGTAGCTGTCTAACAGCATGAGGGTGTGTTGTGGTGGAACACAAACAGCATGT 290 ******************************************* **************** consensus_12280#0 TCTGGACTTCTAGTCATCTTCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGT 2160 consensus_12280#1 TCTGGACTTCTAGTCATCTCCTGAAAGGTGCCTTTTGGTCTAATGAGTACATAATGATGT 350 ******************* **************************************** consensus_12280#0 TTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATT 2220 consensus_12280#1 TTCTTAATGATAAGAGGAGACAAAGCACCATTTTGCCATCTTTTGCTGTGGCAACATATT 410 ************************************************************ consensus_12280#0 TTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTC 2280 consensus_12280#1 TTCATGTTGAGAAGCTAGCATTACCTTTTGTTTTTCATTGATTTTCACTGTACAGAATTC 470 ************************************************************ consensus_12280#0 GGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCAC 2340 consensus_12280#1 GGTGATGCCTGCTGAATCAGCAGTAGCGTCGGCTTACCCTTCTGATTCCTTAATTGGCAC 530 ************************************************************ consensus_12280#0 AGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGTTAAGAACTTTTTGGGAGGAA 2400 consensus_12280#1 AGCCATTTAGCTGAATCTCATTTCTTTGTTCAAATTATGTTAAGAACTTTTTGGGAGGAA 590 ************************************************************ consensus_12280#0 AATATTCCAGAGATAGTAAGTCCTTTTTTTTTGGGCAATGTTAAAAAAAAAGGTATTTCC 2460 consensus_12280#1 AATATTCCAGAGATAGTAAGTCCTTTTTTTTTGGGCAATGGTAAATAATTGGGTATTTCC 650 **************************************** **** ** ********* consensus_12280#0 CTTTGAGCTTCTCTAGTTCTGTTTAATGCAATTTTGTAATTTTGTAACTCTTCTGCTGCA 2520 consensus_12280#1 CTTTGAGCTTCAAAAAAAAAA--------------------------------------- 671 *********** * consensus_12280#0 TGGTGTAAACTT 2532 consensus_12280#1 ------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||