cluster # 12281

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12281 cluster # 12281 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12281#0 length = 1142 sequences # 10
consensusID : consensus_12281#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1142
fasta sequence
                              [GTTCTTCTCTGGTGATCATCATCATCATCAAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC-GAACGCTGTGCGAA-GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT-GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTCATGCCT-AT-GATT-GATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTTCCGCCACTTCAATGATCTCAAGGAGCTCTCTCCTCACCGACTTGCTGAAATCCGCCGCTTCTTTGAAGACTACAAGAAGAATGAAAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCAT-CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAGGCAGTAATGTTTTGGGCATTTAATTGTGGTAAAAAAAAAGGGCTCCGTAAAGATAATGTCAAAAAGAAAAAATAATTGA]

[+] EMBL AK072672             [GTTCTTCTCTGGTGATCATCATCATCATCAAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGCTGTGCGAA GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTCATGCCT AT GATT GATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTTCCGCCACTTCAATGATCTCAAGGAGCTCTCTCCTCACCGACTTGCTGAAATCCGCCGCTTCTTTGAAGACTACAAGAAGAATGAAAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCAT CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAGGCAGTAATGTTTTGGGCATTTAATTGTGGTAAAAAAAAAGGGCTCCGTAAAGATAATGTCAAAAAGAAAAAATAATTGA]
[+] EMBL BP184815             [                          ATCAAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGCTGTGCGAA GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTCATGCCT AT GATT GATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTTCCGCCACTTCAATGATCTCAAGGAGCTCTCTCCTCACCGACTTGCTGAAATCCGCCGCTTCTTTGAAGACTACAAGAAGAATGAAAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU101142             [                           TCAAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATNAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGANTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTNGTTGAGATCACAAAGGGGAGCTAAGTGAAGTATGAACTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCNATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGCTGTTCGAA GATGGGGATCCAATGGATGTTCTGGTCCTGATGCAGGAACCAGTNATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTAATGCCT ATaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU165331             [                             AAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGCTGTGCGAA GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTCATGCCT ATGGATTGGATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU165333             [                             AAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGCGGAACGCTGTGCGAAGGATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCTGGGCTGCTACCTTAGAGCCAAGGCCATTGGGCTCATGCCTAAT GATT GATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU173568             [                             AAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGTTGTGCGAA GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGG CTCATGCCT AT GATT GATCAGGGTGAGAAAGATGATAAGATCATCGGGGTTTCGGTTGATGA NCCGAGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU101143             [                                                                                                                                                                                                                                                                                                                                                                                                                    TCATGCCT AT GATT GATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTTCCGCCACTTCAATGATCTCAAGGAGCTCTCTCCTCACCGACTTGCTGAAATCCGCCGCTTCTTTGAAGACTACAAGNAGAATGAAAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCAT CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCAAAaaaaa                                                                                                                                                  ]
[+] EMBL C98503               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGAAGACTACAAGAAGAATG AAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCATCCGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAaaaaa                                                                           ]
[+] EMBL AU172898             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TATATCCTGCACAGCCTGAGGCGCTAATTAATTATCAT CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAaaaaa                                                                           ]
[+] EMBL C98533               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTAATTAATTATCAN CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCANCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAGGCAGTAATGTTTTGGGCATTTAAAAAAAAAAAAAAAAAAaaaaa                                   ]




>consensus_12281#0
GTTCTTCTCTGGTGATCATCATCATCATCAAGTCCTATTAAACATCTGGAGAATGGCTGA
AGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGT
GGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGT
TGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAAT
GATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCAT
ACCGCGAACGCTGTGCGAAGATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACC
AGTGATTCCTGGCTGCTACCTTAGAGCCAAGGCCATTGGCCTCATGCCTATGATTGATCA
GGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTTCCGCCACTT
CAATGATCTCAAGGAGCTCTCTCCTCACCGACTTGCTGAAATCCGCCGCTTCTTTGAAGA
CTACAAGAAGAATGAAAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGC
TCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAG
GCGCTAATTAATTATCATCGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATA
ACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAA
ACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTAC
TGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCA
TGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTG
TGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAAT
TTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAGGCAGTAATGTTTTGGGC
ATTTAATTGTGGTAAAAAAAAAGGGCTCCGTAAAGATAATGTCAAAAAGAAAAAATAATT
GA
clustalw multiple alignements is not computed in this case