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Oryza sativa
cluster # 12282 cluster # 12282       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12282#0 length = 2017 sequences # 9  
consensus_12282#1 length = 608 sequences # 1  

consensusID : consensus_12282#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2017
fasta sequence
                              [CCGCCGCCATGGACAGGGCACCGCCGCGCGGCGCCCCGCGCGACGCCGTCGGCCAGCGGTGGCTCGCCGTCTTCGTCTTCCAGGCCGCGCTCTCGGCCGCGGCCTCCGCGCTCTACCTCGCCGCGTCCCCGCGCCGCCGCCACGCCCGCCTCGGCGTGCCCCGGGGCCTCCTCCTCGCGCTCCACCCGTTCCTCTCCCTGGCCGCCACGGGGCTCCTCGCGCTCGCCTTCCTCGTCTCCGCGTCGCCCCACCCGCGCGCTCCCCCCGTGCCGCGCCGCGCCCTCGCGGCGTCCCTCCTCGCCGCCGCCGGGGCGCTCTGCGTGGGCGCCGCCGCGTCGCTGGTACCCGAGGACTCCGGGTGGGCGGCTGTTGCTGGGATGGAGTTCCGCGGCGCTGTGTTGGGAGCCGTGTTCGCCGCGCACTATTTCGGGCGTCGGAGGTGGTTGCTCCAGTTCCCCGTTGTGCAGCGACCTCCGTTCTATGGTTTGAAAATGGGGCTTCTGCCATCTGGAAAAAGGGCTCTGAAGGTGTCACTTCAGGCCTTCTTCCTTTCCTTTATCTTGATTTTCGTTCTTCCTCAGCAATTCAGAATCAGAGGATCCATTGGAAGCCAAATTATCGCCCAAATCGGTATTTTTATAATGAGCACTGCCGTTGCCTTCTGTTGGGAAATAAGTCATCATTTTGTCCAGGTTGTGCATACAAGAAGGTGCAGTTTCGCTCCACCACAGAGCACTGCTGCTGCAGAGACTAATCCTACTGAGTATATCCTAGAAACATTGGAACTGAGTGATCCAAGATCACTAATGCAGTATCTTGCATACCAAGATTTGTGTGCTGTATCTGAATGTAACTTAGAACCATGGCGTCGAGCGGCCTTCTTTGAGGAATCTGGTGAGACTTACAAAAGAATTGTGACAGCTTGTTTGAAGCCGCTTGAGGAGTTCACGTCAAAAATTGCTGAAGCTCTTGAAGGGTTTTCTAGTGAGAAACCAGAATTGTTGTCACAACAGTTCAAACTTGCTGCTGCATTTAATGATTCACAGATATGCACATGGTGCGCTCGGACATTGTCATCTTTAACTGCACGGTCACGCCAAGAAGATCGGTATGGAGTTGCTCAACTCACAGGCTGCAATGCTGCTGTGATGTCTACTTTGCTGTCTGCGCTAGTTGCCGTTGAGGCCTGTTTGGGGAAGAAAACTAACCCACAACCTGCGCACTCACTGGGTCCAGCAAGCATTAAGTGGGCTAACTTTTCCACCGGGAGAAAAGGCAATGTAACTGCCATTGCAAGCACGCAAAGAGGTGGTC-TTCACACTAAAGCTTTTTCCATGGCCGATGTTATTCGAACTTCGATCTATCAGATGGTTTCAGCCTTTGAGCATGACATGCGGGCAAATGCTAAAGCATCAAGTTTGGAGAAGAACTGGATCAGTGAAGGAAGAAAACCTGTA-TTTGGTTCACAGGCTGTGTTGGTTCAGAAGCTGAGCCTGTTTATTGAGTACCGTGCTGTCTGAACTTGGCATCCTGTACCAAAT-CCTTACCGGCCATTTAAATTATTCTTGGATGAAGGTTCTTTCGTTTTGGATTTGGATGGGAGAGTTTGTTTGACTATGAATCTTTCGAACAGATTATGACTCTCATTCAGGTTCAGGGGGCCAATATTT-TATATCAAGAACGACTTGGATAGTGGCATTTTCTGCTCATAATCGT-CAGGATGTAAGAAAGACATGAACTGTTATACCTATGGAGAGCTTTTCAAAAGATAAT-TACA-TTTCTGCACTGGGAAAAAGCCACGCTGGTTTTGAAAAACTATGCCGGTGAACCTGCTGTATACTACTTTTCATTTTCTCA-CCCTGGAGTTGTAATCTGTATGTTGTCATGGGAGAAGGAAACCAGAGCTGTGCTGAACTCAATAGGCTTATTGGAATTTTCGTTCTCACAATGTAACTTGTTTGTTAGTCTTACCCACTTAACAGCTTCACCTGAAGTTCTAGTCAAATTCTAATGCTTT]

[+] EMBL CB633095             [CCGCCGCCATGGACAGGGCACCGCCGCGCGGCGCCCCGCGCGACGCCGTCGGCCAGCGGTGGCTCGCCGTCTTCGTCTTCCAGGCCGCGCTCTCGGCCGCGGCCTCCGCGCTCTACCTCGCCGCGTCCCCGCGCCGCCGCCACGCCCGCCTCGGCGTGCCCCGGGGCCTCCTCCTCGCGCTCCACCCGTTCCTCTCCCTGGCCGCCACGGGGCTCCTCGCGCTCGCCTTCCTCGTCTCCGCGTCGCCCCACCCGCGCGCTCCCCCCGTGCCGCGCCGCGCCCTCGCGGCGTCCCTCCTCGCCGCCGCCGGGGCGCTCTGCGTGGGCGCCGCCGCGTCGCTGGTACCCGAGGACTCCGGGTGGGCGGCTGTTGCTGGGATGGAGTTCCGCGGCGCTGTGTTGGGAGCCGTGTTCGCCGCGCACTATTTCGGGCGTCGGAGGTGGTTGCTCCAGTTCCCCGTTGTGCAGCGACCTCCGTTCTATGGTTTGAAAATGGGGCTTCTGCCATCTGGAAAAAGGGCTCTGAAGGTGTCACTTCAGGCCTTCTTCCTTTCCTTTATCTTGATTTTCGTTCTTCCTCAGCAATTCAGAATCAGAGGATCCATTGGAAGCCAAATTATCGCCCAAATCGGTATTTTTATAATGAGCACTGCCGTTGCCTTCTGTTGGGAAATAAGTCATCATTTTGTCCAGGTTGTGCATACAAGAAGGTGCAGTTTCGCTCCACCACAGAGCACTGCTGCTGCAGAGACTAATCCTACTGAGTATATCCTAGAAACATTGGAACTGAGTGATCCNAGATCACTAATGCAGTATCTTGCATACCAAGATTTGTGTGCTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB657640             [                                                                                                                                                                                                                                                                                                                                                                                                       CGCTGTGTTGGGAGCCGTGTTCGCCGCGCACTATTTCGGGCGTCGGAGGTGGTTGCTCCAGTTCCCCGTTGTGCAGCGACCTCCGTTCTATGGTTTGAAAATGGGGCTTCTGCCATCTGGAAAAAGGGCTCTGAAGGTGTCACTTCAGGCCTTCTTCCTTTCCTTTATCTTGATTTTCGTTCTTCCTCAGCAATTCAGAATCAGAGGATCCATTGGAAGCCAAATTATCGCCCAAATCGGTATTTTTATAATGAGCACTGCCGTTGCCTTCTGTTGGGAAATAAGTCATCATTTTGTCCAGGTTGTGCATACAAGAAGGTGCAGTTTCGCTCCACCACAGAGCACTGCTGCTGCAGAGACTAATCCTACTGAGTATATCCTAGAAACATTGGAACTGAGTGATCCAAGATCACTAATGCAGTATCTTGCATACCAAGATTTGTGTGCTGTATCTGAATGTAACTTAGAACCATGGCGTCGAGCGGCCTTCTTTGAGGAATCTGGTGAGACTTACAAAAGAATTGTGACAGCTTGTTTGAAGCCGCTTGAGGAGTTCACGTCAAAAATTGCTGAAGCTCTTGAAGGGTTTTCTAGTGAGAAACCAGAATTGTTGTCACAACAGTTCAAACTTGCTGCTGCATTTAATGATTCACAGATATGCACATGGTGCGCTCGGACATTGTCATCTTTAACTGCACGGTCACGCCAAGAAGATCGGTATGGAGTTGCTCAACTCACAGGCTGCAATGCTGCTGTGATGTCTACTTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK108514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCCTAGAAACATTGGAACTGAGTGATCCAAGATCACTAATGCAGTATCTTGCATACCAAGATTTGTGTGCTGTATCTGAATGTAACTTAGAACCATGGCGTCGAGCGGCCTTCTTTGAGGAATCTGGTGAGACTTACAAAAGAATTGTGACAGCTTGTTTGAAGCCGCTTGAGGAGTTCACGTCAAAAATTGCTGAAGCTCTTGAAGGGTTTTCTAGTGAGAAACCAGAATTGTTGTCACAACAGTTCAAACTTGCTGCTGCATTTAATGATTCACAGATATGCACATGGTGCGCTCGGACATTGTCATCTTTAACTGCACGGTCACGCCAAGAAGATCGGTATGGAGTTGCTCAACTCACAGGCTGCAATGCTGCTGTGATGTCTACTTTGCTGTCTGCGCTAGTTGCCGTTGAGGCCTGTTTGGGGAAGAAAACTAACCCACAACCTGCGCACTCACTGGGTCCAGCAAGCATTAAGTGGGCTAACTTTTCCACCGGGAGAAAAGGCAATGTAACTGCCATTGCAAGCACGCAAAGAGGTGGTC TTCACACTAAAGCTTTTTCCATGGCCGATGTTATTCGAACTTCGATCTATCAGATGGTTTCAGCCTTTGAGCATGACATGCGGGCAAATGCTAAAGCATCAAGTTTGGAGAAGAACTGGATCAGTGAAGGAAGAAAACCTGTA TTTGGTTCACAGGCTGTGTTGGTTCAGAAGCTGAGCCTGTTTATTGAGTACCGTGCTGTCTGAACTTGGCATCCTGTACCAAAT CCTTACCGGCCATTTAAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF310572             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATGGTGCGCTCGGACATTGTCATCTTTAACTGCACGGTCACGCCAAGAAGATCGGTATGGAGTTGCTCAACTCACAGGCTGCAATGCTGCTGTGATGTCTACTTTGCTGTCTGCGCTAGTTGCCGTTGAGGCCTGTTTGGGGAAGAAAACTAACCCACAACCTGCGCACTCACTGGGTCCAGCAAGCATTAAGTGGGCTAACTTTTCCACCGGGAGAAAAGGCAATGTAACTGCCATTGCAAGCACGCAAAGAGGTGGTC TTCACACTAAAGCTTTTTCCATGGCCGATGTTATTCGAACTTCGATCTATCAGATGGTTTCAGCCTTTGAGCATGACATGTGGGCAAATGCTAAAGCATCAAGTTTGGAGAAGAACTGGATCAGTGAAGGAAGAAAACCTGTA TTTGGTTCACAGGCTGTGTTGGTTCAGAAGCTGAGCCTGTTTATTGAGTACCGTGCTGTCTGAACTTGGCATCCTGTACCAAAT CCTTACCGGCCATTTAAATTATTCTTGGATGAAGGTTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB669463             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGGGGAAGAAAACTAACCCACAACCTGCGCACTCACTGGGTCCAGCAAGCATTAAGTGGGCTAACTTTTCCACCGGGAGAAAAGGCAATGTAACTGCCATTGCAAGCACGCAAAGAGGTGGTC TTCACACTAAAGCTTTTTCCATGGCCGATGTTATTCGAACTTCGATCTATCAGATGGTTTCAGCCTTTGAGCATGACATGCGGGCAAATGCTAAAGCATCAAGTTTGGAGAAGAACTGGATCAGTGAAGGAAGAAAACCTGTA TTTGGTTCACAGGCTGTGTTGGTTCAGAAGCTGAGCCTGTTTATTGAGTACCGTGCTGTCTGAACTTGGCATCCTGTACCAAAT CCTTACCGGCCATTTAAATTATTCTTGGATGAAGGTTATTTCGTTTTGGATTTGGATGGGAGAGTTTGTTTGACTATGAATCTTTCGAACAGATTATGACTCTCATTCAGGTTCAGGGGGCCAATATTT TATATCAAGAACGACTTGGATAGTGGCATTTTCTGCTCATAATCGT CAGGATGTAAGAAAGACATGAATTGTTATACCTATGGAGAGCTTTTCAAAAGATAAT TACA TTTCTCCACTGGGAAAAAGCCACGCTGGTTTTGAAAAACTATGCCGGTGAACCTGCTGTATACTACTTTTCATTTTCTCA CCCTGGAGTTGTAATCTGTATGTTGTCATGGGAGAAGGAAACCAGAGCTGTGCTGAACTCAATAGGCTTATTGGAATTTTCGTTC                                                                           ]
[-] EMBL CB633096             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATTAAGTGGGCTAACTTTTCCACCGGGAGAAAAGGCAATGTAACTGCCATTGCAAGCACGCAAAGAGGTGGTC TTCACACTAAAGCTTTTTCCATGGCCGATGTTCTTCGAACTTCGATCTATCAGATGGTTTCAGCCTTTGAGCATGACATGCGGGCAAATGCTAAAGCATCAAGTTTGGAGAAGAACTGGATCAGTGAAGGAAGAAAACCTGTA TTTGGTTCACAGGCTGTGTTGGTTCAGAAGCTGAGCCTGTTTATTGAGTACCGTGCTGTCTGAACTTGGCATCCTGTCCCAAAT CCTTACCGGCCATTTAAATTATTCTTGGATGAAGGTTCTTTCGTTTTGGATTTGGATGGGAGAGTTTGTTTGACTATGAATCTTTCGAACAGATTATGACTCTCATTCAGGTTCAGGGGGCCAATATTT TATATCAAGAACGACTTGGATAGTGGCATTTTCTGCTCATAATCGT CAGGATGTAAGAAAGACATGAACTGTTATACCTATGGAGAGCTTTTCAAAAGATAAT TACA TTTCTGCACTGGGAAAAAGCCACGCTGGTTTTGAAAAACTATGCCGGTGAACCTGCTGTATACTACTTTTCATTTTCTCA CCCTGGAGTTGTAATCTGTATGTTGTCATGGGAGAAGGAAACCAGAGCTGTGCTGAACTCAATAGGCTTATTGGAATTTTCGTTCTCACAATGTAACTTGTTTGTTAGTCTTACCCACTTAACAGCTTCACCTGAAGTTCTAGTCAAATTCTAATGCTTT]
[+] EMBL BI812417             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCAC CAAAGAGGTGGTCTTTCACACTAAAGCTTTTTCCATGCCAGATGTTCTTCGAACTTCGATCTATCAGAT GTTTCA CCTTTGAGCATGACATGCGGGCAAATGCTAAAGCATCAAGTTTGGAGAAGAACTGGATCAGTGAAGGAAGAAAACCTGTA TTTGGTTCACAGGCTGTGTTGGTTCAGAAGCTGAGCCTGTTTATTGAGTACCGTGCTGTCTGAACTTGGCATCCTGT CCCAAT CCTTACCGGCCATTTAAATTATTCTTGGATGAAGGTTCTTTCGTTTTGGATTTGGATGGGAGAGTTTGTTTGACTATGAATCTTTCGAACAGATTATGACTCTCATTCAGGTTCAGGGGGCCAATATTT TATATCAAGAACGACTTGGATAGTGGCATTTTCTGCTCATAATCGT CAGGATGTAAGAAAGACATGAACTGTTATACCTATGGAGAGCTTTTC AAAGATAAT TACA TTTCTGCACTGGGAAAAAaaaaa                                                                                                                                                                                                                          ]
[+] EMBL BM418998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTGAAGGAAGAAAACCTGTATTTTGGTTCACA GCTGTGTTGTTTCAGAAGCTGAGCCTGTTTATTGAGTACCGTGCTGTCTGAACTTGGCATCCTGTCCCAAATGCCTTACC GCCATTTAAATTATTCTTGGATGAAGGTTCTTTCGTTTTGGATTTGGATGGGAGA TTTGTTTGACTATGAATCTTTCGAACAGATTATGACTCTCATTCAGGTTCAGGGGGCCAATATTTGTATATCAAGAACGACTTGGATAGT GCATTTTCTGCTCATAATCGTCCAGGATGTAAGAAAGACATGAACTGTTATACCTATGGAGAGCTTTTC AAAGATAATGTACACTTTCTGCACTGGGAAAAAGCCACGCTGGTTTTGAAAAACTATGCCGGTGAACCTGCTGTATACTACTTTTCATTTTCTCACCCCTGGAGTTGTAATCTGTATGTTGTCATGGGAGAAGGAAACCAGAGCTGTGCTGAACTC ATAGGCTTATTGGAATTTTCGTTCTCAC ATGTAAaaa                                                             ]
[+] EMBL CA767003             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAACCTGTA TTTGGTTCACAGGCTGTGTTGGTTCAGAAGCTGAGCCTGTTTATTGAGTACCGTGCTGTCTGAACTTGGCATCCTGTCCCAAAT CCTTACCGGCCATTTAAATTATTCTTGGATGAAGGTTCTTTCGTTTTGGATTTGGATGGGAGAGTTTGTTTGACTATGAATCTTTCGAACAGATTGTGACTCTCATTCAGGTTCAGGGGGCCAATATTT TATATCAAGAACGACTTGGATAGTGGCATTTTCTGCTCATAATCGT CAGGATGTAAGAAAGACATGAACTGTTATACCTATGGAGAGCTTTTCAAAAGATAAT TACA TTTCTGCACTGGGAAAAAGCCACGCTGGTTTTGAAAAACTATGCCGGTGAACCTGCTGTATACTACTTTTCATTTTCTCA CCCTGGAGTTGTAATCTGTATGTTGTCATGGGAGAAGGAAACCAGAGCTGTGCTGAACTCAATAGGCTTATTGGAATTTTCGTTCTCACAATGTAACTTGTTTGTTAGTCTTA                                               ]


>consensus_12282#0 CCGCCGCCATGGACAGGGCACCGCCGCGCGGCGCCCCGCGCGACGCCGTCGGCCAGCGGT GGCTCGCCGTCTTCGTCTTCCAGGCCGCGCTCTCGGCCGCGGCCTCCGCGCTCTACCTCG CCGCGTCCCCGCGCCGCCGCCACGCCCGCCTCGGCGTGCCCCGGGGCCTCCTCCTCGCGC TCCACCCGTTCCTCTCCCTGGCCGCCACGGGGCTCCTCGCGCTCGCCTTCCTCGTCTCCG CGTCGCCCCACCCGCGCGCTCCCCCCGTGCCGCGCCGCGCCCTCGCGGCGTCCCTCCTCG CCGCCGCCGGGGCGCTCTGCGTGGGCGCCGCCGCGTCGCTGGTACCCGAGGACTCCGGGT GGGCGGCTGTTGCTGGGATGGAGTTCCGCGGCGCTGTGTTGGGAGCCGTGTTCGCCGCGC ACTATTTCGGGCGTCGGAGGTGGTTGCTCCAGTTCCCCGTTGTGCAGCGACCTCCGTTCT ATGGTTTGAAAATGGGGCTTCTGCCATCTGGAAAAAGGGCTCTGAAGGTGTCACTTCAGG CCTTCTTCCTTTCCTTTATCTTGATTTTCGTTCTTCCTCAGCAATTCAGAATCAGAGGAT CCATTGGAAGCCAAATTATCGCCCAAATCGGTATTTTTATAATGAGCACTGCCGTTGCCT TCTGTTGGGAAATAAGTCATCATTTTGTCCAGGTTGTGCATACAAGAAGGTGCAGTTTCG CTCCACCACAGAGCACTGCTGCTGCAGAGACTAATCCTACTGAGTATATCCTAGAAACAT TGGAACTGAGTGATCCAAGATCACTAATGCAGTATCTTGCATACCAAGATTTGTGTGCTG TATCTGAATGTAACTTAGAACCATGGCGTCGAGCGGCCTTCTTTGAGGAATCTGGTGAGA CTTACAAAAGAATTGTGACAGCTTGTTTGAAGCCGCTTGAGGAGTTCACGTCAAAAATTG CTGAAGCTCTTGAAGGGTTTTCTAGTGAGAAACCAGAATTGTTGTCACAACAGTTCAAAC TTGCTGCTGCATTTAATGATTCACAGATATGCACATGGTGCGCTCGGACATTGTCATCTT TAACTGCACGGTCACGCCAAGAAGATCGGTATGGAGTTGCTCAACTCACAGGCTGCAATG CTGCTGTGATGTCTACTTTGCTGTCTGCGCTAGTTGCCGTTGAGGCCTGTTTGGGGAAGA AAACTAACCCACAACCTGCGCACTCACTGGGTCCAGCAAGCATTAAGTGGGCTAACTTTT CCACCGGGAGAAAAGGCAATGTAACTGCCATTGCAAGCACGCAAAGAGGTGGTCTTCACA CTAAAGCTTTTTCCATGGCCGATGTTATTCGAACTTCGATCTATCAGATGGTTTCAGCCT TTGAGCATGACATGCGGGCAAATGCTAAAGCATCAAGTTTGGAGAAGAACTGGATCAGTG AAGGAAGAAAACCTGTATTTGGTTCACAGGCTGTGTTGGTTCAGAAGCTGAGCCTGTTTA TTGAGTACCGTGCTGTCTGAACTTGGCATCCTGTACCAAATCCTTACCGGCCATTTAAAT TATTCTTGGATGAAGGTTCTTTCGTTTTGGATTTGGATGGGAGAGTTTGTTTGACTATGA ATCTTTCGAACAGATTATGACTCTCATTCAGGTTCAGGGGGCCAATATTTTATATCAAGA ACGACTTGGATAGTGGCATTTTCTGCTCATAATCGTCAGGATGTAAGAAAGACATGAACT GTTATACCTATGGAGAGCTTTTCAAAAGATAATTACATTTCTGCACTGGGAAAAAGCCAC GCTGGTTTTGAAAAACTATGCCGGTGAACCTGCTGTATACTACTTTTCATTTTCTCACCC TGGAGTTGTAATCTGTATGTTGTCATGGGAGAAGGAAACCAGAGCTGTGCTGAACTCAAT AGGCTTATTGGAATTTTCGTTCTCACAATGTAACTTGTTTGTTAGTCTTACCCACTTAAC AGCTTCACCTGAAGTTCTAGTCAAATTCTAATGCTTT



consensusID : consensus_12282#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 608
fasta sequence
                              [CGCCATGGACAGGGGACCCTCGCGCGGCGCCCCGCACGAAGACATCAGACAGGGATGGCTCCCCGTCTTCAACTTCAAGGCCGCGCTATGATCCGCGACCTCCCCGCTCTAGCTCGCCGCGTCCCCGCACCGCCGCCAGGACATGGTCCGGGTGCCCCGGGGACTGCTCATCGCGCTCCACCCGTTCCTCTCCCTGGACGCCACAGGGCTGCTCTCGCTCCTCGTCCTCGTCTCCTGGTCGGCGAACCCTCGCGCTCCCCCCGTGTGGCGCCACGCCCTCTGGGCAATGCTCCTCGCCGCCACCAGGGAGCTCTGCGGGGGCGCCGCCGCTGCACTGGTACCATAGGACTCCGGGTGGGCGGCTGATGCTGGGATGGAGTTCCGCAGCACTGTGTTGGGAGCCGTGTTCGCCGCGCACTATTTCGGGCGTCGGAGGTGGTTGCTCCACTTCCCCGTTGTGCAGCGACCTCCGTTCTATGGTTTGAAAATGGGGCTTCTGCCATCTGGAAAAAGGGCTCTGAAGGTGTCACTTCAGGCCTTCTTCCTTTCCTTTATCTTGATTTTCGTTCTTCCTCAGGAATTCAGAATCAGAGGATCCATTGGAAGCC]

[+] EMBL CB643033             [CGCCATGGACAGGGGACCCTCGCGCGGCGCCCCGCACGAAGACATCAGACAGGGATGGCTCCCCGTCTTCAACTTCAAGGCCGCGCTATGATCCGCGACCTCCCCGCTCTAGCTCGCCGCGTCCCCGCACCGCCGCCAGGACATGGTCCGGGTGCCCCGGGGACTGCTCATCGCGCTCCACCCGTTCCTCTCCCTGGACGCCACAGGGCTGCTCTCGCTCCTCGTCCTCGTCTCCTGGTCGGCGAACCCTCGCGCTCCCCCCGTGTGGCGCCACGCCCTCTGGGCAATGCTCCTCGCCGCCACCAGGGAGCTCTGCGGGGGCGCCGCCGCTGCACTGGTACCATAGGACTCCGGGTGGGCGGCTGATGCTGGGATGGAGTTCCGCAGCACTGTGTTGGGAGCCGTGTTCGCCGCGCACTATTTCGGGCGTCGGAGGTGGTTGCTCCACTTCCCCGTTGTGCAGCGACCTCCGTTCTATGGTTTGAAAATGGGGCTTCTGCCATCTGGAAAAAGGGCTCTGAAGGTGTCACTTCAGGCCTTCTTCCTTTCCTTTATCTTGATTTTCGTTCTTCCTCAGGAATTCAGAATCAGAGGATCCATTGGAAGCC]


>consensus_12282#1 CGCCATGGACAGGGGACCCTCGCGCGGCGCCCCGCACGAAGACATCAGACAGGGATGGCT CCCCGTCTTCAACTTCAAGGCCGCGCTATGATCCGCGACCTCCCCGCTCTAGCTCGCCGC GTCCCCGCACCGCCGCCAGGACATGGTCCGGGTGCCCCGGGGACTGCTCATCGCGCTCCA CCCGTTCCTCTCCCTGGACGCCACAGGGCTGCTCTCGCTCCTCGTCCTCGTCTCCTGGTC GGCGAACCCTCGCGCTCCCCCCGTGTGGCGCCACGCCCTCTGGGCAATGCTCCTCGCCGC CACCAGGGAGCTCTGCGGGGGCGCCGCCGCTGCACTGGTACCATAGGACTCCGGGTGGGC GGCTGATGCTGGGATGGAGTTCCGCAGCACTGTGTTGGGAGCCGTGTTCGCCGCGCACTA TTTCGGGCGTCGGAGGTGGTTGCTCCACTTCCCCGTTGTGCAGCGACCTCCGTTCTATGG TTTGAAAATGGGGCTTCTGCCATCTGGAAAAAGGGCTCTGAAGGTGTCACTTCAGGCCTT CTTCCTTTCCTTTATCTTGATTTTCGTTCTTCCTCAGGAATTCAGAATCAGAGGATCCAT TGGAAGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12282#0      CCGCCGCCATGGACAGGGCACCGCCGCGCGGCGCCCCGCGCGACGCCGTCGGCCAGCGGT 60
consensus_12282#1      ----CGCCATGGACAGGGGACCCTCGCGCGGCGCCCCGCACGAAGACATCAGACAGGGAT 56
                           ************** ***  *************** *** * * ** * *** * *

consensus_12282#0      GGCTCGCCGTCTTCGTCTTCCAGGCCGCGCTCTCGGCCGCGGCCTCCGCGCTCTACCTCG 120
consensus_12282#1      GGCTCCCCGTCTTCAACTTCAAGGCCGCGCTATGATCCGCGACCTCCCCGCTCTAGCTCG 116
                       ***** ********  **** ********** *   ***** ***** ******* ****

consensus_12282#0      CCGCGTCCCCGCGCCGCCGCCACGCCCGCCTCGGCGTGCCCCGGGGCCTCCTCCTCGCGC 180
consensus_12282#1      CCGCGTCCCCGCACCGCCGCCAGGACATGGTCCGGGTGCCCCGGGGACTGCTCATCGCGC 176
                       ************ ********* * *    ** * *********** ** *** ******

consensus_12282#0      TCCACCCGTTCCTCTCCCTGGCCGCCACGGGGCTCCTCGCGCTCGCCTTCCTCGTCTCCG 240
consensus_12282#1      TCCACCCGTTCCTCTCCCTGGACGCCACAGGGCTGCTCTCGCTCCTCGTCCTCGTCTCCT 236
                       ********************* ****** ***** *** *****  * *********** 

consensus_12282#0      CGTCGCCCCACCCGCGCGCTCCCCCCGTGCCGCGCCGCGCCCTCGCGGCGTCCCTCCTCG 300
consensus_12282#1      GGTCGGCGAACCCTCGCGCTCCCCCCGTGTGGCGCCACGCCCTCTGGGCAATGCTCCTCG 296
                        **** *  **** ***************  ***** *******  ***    *******

consensus_12282#0      CCGCCGCCGGGGCGCTCTGCGTGGGCGCCGCCGCGTCGCTGGTACCCGAGGACTCCGGGT 360
consensus_12282#1      CCGCCACCAGGGAGCTCTGCGGGGGCGCCGCCGCTGCACTGGTACCATAGGACTCCGGGT 356
                       ***** ** *** ******** ************  * ********  ************

consensus_12282#0      GGGCGGCTGTTGCTGGGATGGAGTTCCGCGGCGCTGTGTTGGGAGCCGTGTTCGCCGCGC 420
consensus_12282#1      GGGCGGCTGATGCTGGGATGGAGTTCCGCAGCACTGTGTTGGGAGCCGTGTTCGCCGCGC 416
                       ********* ******************* ** ***************************

consensus_12282#0      ACTATTTCGGGCGTCGGAGGTGGTTGCTCCAGTTCCCCGTTGTGCAGCGACCTCCGTTCT 480
consensus_12282#1      ACTATTTCGGGCGTCGGAGGTGGTTGCTCCACTTCCCCGTTGTGCAGCGACCTCCGTTCT 476
                       ******************************* ****************************

consensus_12282#0      ATGGTTTGAAAATGGGGCTTCTGCCATCTGGAAAAAGGGCTCTGAAGGTGTCACTTCAGG 540
consensus_12282#1      ATGGTTTGAAAATGGGGCTTCTGCCATCTGGAAAAAGGGCTCTGAAGGTGTCACTTCAGG 536
                       ************************************************************

consensus_12282#0      CCTTCTTCCTTTCCTTTATCTTGATTTTCGTTCTTCCTCAGCAATTCAGAATCAGAGGAT 600
consensus_12282#1      CCTTCTTCCTTTCCTTTATCTTGATTTTCGTTCTTCCTCAGGAATTCAGAATCAGAGGAT 596
                       ***************************************** ******************

consensus_12282#0      CCATTGGAAGCCAAATTATCGCCCAAATCGGTATTTTTATAATGAGCACTGCCGTTGCCT 660
consensus_12282#1      CCATTGGAAGCC------------------------------------------------ 608
                       ************                                                

consensus_12282#0      TCTGTTGGGAAATAAGTCATCATTTTGTCCAGGTTGTGCATACAAGAAGGTGCAGTTTCG 720
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      CTCCACCACAGAGCACTGCTGCTGCAGAGACTAATCCTACTGAGTATATCCTAGAAACAT 780
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      TGGAACTGAGTGATCCAAGATCACTAATGCAGTATCTTGCATACCAAGATTTGTGTGCTG 840
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      TATCTGAATGTAACTTAGAACCATGGCGTCGAGCGGCCTTCTTTGAGGAATCTGGTGAGA 900
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      CTTACAAAAGAATTGTGACAGCTTGTTTGAAGCCGCTTGAGGAGTTCACGTCAAAAATTG 960
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      CTGAAGCTCTTGAAGGGTTTTCTAGTGAGAAACCAGAATTGTTGTCACAACAGTTCAAAC 1020
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      TTGCTGCTGCATTTAATGATTCACAGATATGCACATGGTGCGCTCGGACATTGTCATCTT 1080
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      TAACTGCACGGTCACGCCAAGAAGATCGGTATGGAGTTGCTCAACTCACAGGCTGCAATG 1140
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      CTGCTGTGATGTCTACTTTGCTGTCTGCGCTAGTTGCCGTTGAGGCCTGTTTGGGGAAGA 1200
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      AAACTAACCCACAACCTGCGCACTCACTGGGTCCAGCAAGCATTAAGTGGGCTAACTTTT 1260
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      CCACCGGGAGAAAAGGCAATGTAACTGCCATTGCAAGCACGCAAAGAGGTGGTCTTCACA 1320
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      CTAAAGCTTTTTCCATGGCCGATGTTATTCGAACTTCGATCTATCAGATGGTTTCAGCCT 1380
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      TTGAGCATGACATGCGGGCAAATGCTAAAGCATCAAGTTTGGAGAAGAACTGGATCAGTG 1440
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      AAGGAAGAAAACCTGTATTTGGTTCACAGGCTGTGTTGGTTCAGAAGCTGAGCCTGTTTA 1500
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      TTGAGTACCGTGCTGTCTGAACTTGGCATCCTGTACCAAATCCTTACCGGCCATTTAAAT 1560
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      TATTCTTGGATGAAGGTTCTTTCGTTTTGGATTTGGATGGGAGAGTTTGTTTGACTATGA 1620
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      ATCTTTCGAACAGATTATGACTCTCATTCAGGTTCAGGGGGCCAATATTTTATATCAAGA 1680
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      ACGACTTGGATAGTGGCATTTTCTGCTCATAATCGTCAGGATGTAAGAAAGACATGAACT 1740
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      GTTATACCTATGGAGAGCTTTTCAAAAGATAATTACATTTCTGCACTGGGAAAAAGCCAC 1800
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      GCTGGTTTTGAAAAACTATGCCGGTGAACCTGCTGTATACTACTTTTCATTTTCTCACCC 1860
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      TGGAGTTGTAATCTGTATGTTGTCATGGGAGAAGGAAACCAGAGCTGTGCTGAACTCAAT 1920
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      AGGCTTATTGGAATTTTCGTTCTCACAATGTAACTTGTTTGTTAGTCTTACCCACTTAAC 1980
consensus_12282#1      ------------------------------------------------------------
                                                                                   

consensus_12282#0      AGCTTCACCTGAAGTTCTAGTCAAATTCTAATGCTTT 2017
consensus_12282#1      -------------------------------------
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)