cluster # 12284

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Oryza sativa
cluster # 12284 cluster # 12284 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12284#0 length = 2210 sequences # 9

consensus_12284#1 length = 855 sequences # 1

consensusID : consensus_12284#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2210
fasta sequence

                              [AGGAGGAGTGGAGATGGGCACCATCTGCCGGCCCCTCCGGAGCTCACCTCGTCGGCGCGGTGGACGAAGACGATAGTGTTGGCGAGGGCGGGGGCGGCGTCGGGTGGGGCGCACCCGATGGCGACGCTGCCGGGGGATCGGGGATTCGAGAATCCGGTGTGGACGACGGCGGGCAGGTGGGCGAGTGGGACCTCCCTATGAGCTCCTTTCGGGGGCGGGTTCAGGTACAGCATCACCAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGACGAAGATGGAGGTGGCTGCGAATGGTCGGACCCGGGTTTCTTCTTGCGAGGCCAAGAGGAGGAGGCCAGCAGCAGCGTGAGCACCACCACGGCCATGGAAGAGATTCTCACCTTGGCGAGGAGCCCCGCGGTCGACGGGCAGGCGTTTGCCGAGTTCTTGGCGGGGTACGGCCGCGGAGCACTCAGTGTGGAGGAATGCGTTGAGCTGATGAGGAGGATGGGGGAGGAGGGGCTGGCATTGGGGTGTCTCCACCTTCTCCGATGGATGCAGGCTCCGGAGGAGGAGCCATTGTTGTTGCCCCCGCAGGCATGGCTGCTCGCTGTTGTGGCGCTTGGACGGGCTCAGATGGCCGATGAGGTGCTGGAGATTGTGGAGAGTTTGCCTCCCGAGAGGAGATTCAGTGAGGCTGTCCTTTACAATGCTGCAATGTCAGGCCTAGCCTATCGCGGAAGATATGATGATACCTGGAAAGTATTTAAGCTCATGGAAAAGAAAAATATCCAGCCTGACCACATGACATCCTTAATCATGTTAGATGTAATGAACAAGAGCAAGACATCTGCCAAGGATGCATGGGAATTCTTCCAACGGATGGAAAGAAAAGGTGTCAAGTGGAGCTTGGACATTTGTATTTCTCTTATCAAGATCTTTTGTGACAACGGTCTGAAAACTGAAGCTCTTATCATACAGTCAGCAATGGAGAAGAAAGGAATTGCATCAAACACGAGCATGTATAACACATTAATAAATGCTTACTGCAAAGCCAATCAAATTGAAGAGGCAGAGGGAGTTTTCGTTGAGATGAAAGAGAAAGGCTTGAGTGCGACAGCAATGACCTATAATATCCTTATGGGTGCTTACTGTAGAAGATTGCAGCCAGAAGTTGTTGAGTCTTTACTGCTGGAGATGCAAGATTTAGGACTACGACCAAATGCGAGATCATACAACTTTCTCATACGTGTTTATGGGCAACAGAAGAAAATGAGTGAAAAGGCTGAAGATGCTTTCTTAAGGATGAAGACAGATGGCATTATGCCAACGTCTTCTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATTTGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCATTGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAATGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTTTGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTGTAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTCTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGTTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAGTGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAG-TTTTGGAAGAACAG-AAAAAAACGTTCTATGATGAACCATGTC-TATGGGTACCCAAGG-AAAAGATTTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTCTGGATGTTCATCCCTTATCCATTACAGCAGCATATAAAATGAACTTTCAGGAAGTTCATGGTGTTCATATTTTAATTCTCTTAAAGCATTCAAGTCAAAAATACGGTTAAAGTATCAAAAAAA]

[+] EMBL AK068789             [AGGAGGAGTGGAGATGGGCACCATCTGCCGGCCCCTCCGGAGCTCACCTCGTCGGCGCGGTGGACGAAGACGATAGTGTTGGCGAGGGCGGGGGCGGCGTCGGGTGGGGCGCACCCGATGGCGACGCTGCCGGGGGATCGGGGATTCGAGAATCCGGTGTGGACGACGGCGGGCAGGTGGGCGAGTGGGACCTCCCTATGAGCTCCTTTCGGGGGCGGGTTCAGGTACAGCATCACCAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGACGAAGATGGAGGTGGCTGCGAATGGTCGGACCCGGGTTTCTTCTTGCGAGGCCAAGAGGAGGAGGCCAGCAGCAGCGTGAGCACCACCACGGCCATGGAAGAGATTCTCACCTTGGCGAGGAGCCCCGCGGTCGACGGGCAGGCGTTTGCCGAGTTCTTGGCGGGGTACGGCCGCGGAGCACTCAGTGTGGAGGAATGCGTTGAGCTGATGAGGAGGATGGGGGAGGAGGGGCTGGCATTGGGGTGTCTCCACCTTCTCCGATGGATGCAGGCTCCGGAGGAGGAGCCATTGTTGTTGCCCCCGCAGGCATGGCTGCTCGCTGTTGTGGCGCTTGGACGGGCTCAGATGGCCGATGAGGTGCTGGAGATTGTGGAGAGTTTGCCTCCCGAGAGGAGATTCAGTGAGGCTGTCCTTTACAATGCTGCAATGTCAGGCCTAGCCTATCGCGGAAGATATGATGATACCTGGAAAGTATTTAAGCTCATGGAAAAGAAAAATATCCAGCCTGACCACATGACATCCTTAATCATGTTAGATGTAATGAACAAGAGCAAGACATCTGCCAAGGATGCATGGGAATTCTTCCAACGGATGGAAAGAAAAGGTGTCAAGTGGAGCTTGGACATTTGTATTTCTCTTATCAAGATCTTTTGTGACAACGGTCTGAAAACTGAAGCTCTTATCATACAGTCAGCAATGGAGAAGAAAGGAATTGCATCAAACACGAGCATGTATAACACATTAATAAATGCTTACTGCAAAGCCAATCAAATTGAAGAGGCAGAGGGAGTTTTCGTTGAGATGAAAGAGAAAGGCTTGAGTGCGACAGCAATGACCTATAATATCCTTATGGGTGCTTACTGTAGAAGATTGCAGCCAGAAGTTGTTGAGTCTTTACTGCTGGAGATGCAAGATTTAGGACTACGACCAAATGCGAGATCATACAACTTTCTCATACGTGTTTATGGGCAACAGAAGAAAATGAGTGAAAAGGCTGAAGATGCTTTCTTAAGGATGAAGACAGATGGCATTATGCCAACGTCTTCTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATTTGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCATTGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAATGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTTTGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTGTAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTCTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGTTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAGTGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAG TTTTGGAAGAACAG AAAAAAACGTTCTATGATGAACCATGTC TATGGGTACCCAAGG AAAAGATTTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTCTGGATGTTCATCCCTTATCCATTACAGCAGCATATAAAATG                                                                                  ]
[+] EMBL CB668345             [AGGAGGAGTGGAGATGGGCACCATCTGCCGGCCCCTCCGGAGCTCACCTCGTCGGCGCGGTGGACGAAGACGATAGTGTTGGCGAGGGCGGGGGCGGCGTCGGGTGGGGCGCACCCGATGGCGACGCTGCCGGGGGATCGGGGATTCGAGAATCCGGTGTGGACGACGGCGGGCAGGTGGGCGAGTGGGACCTCCCTATGAGCTCCTTTCGGGGGCGGGTTCAGGTACAGCATCACCAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGACGAAGATGGAGGTGGCTGCGAATGGTCGGACCCGGGTTTCTTCTTGCGAGGCCAAGAGGAGGAGGCCAGCAGCAGCGTGAGCACCACCACGGCCATGGAAGAGATTCTCACCTTGGCGAGGAGCCCCGCGGTCGACGGGCAGGCGTTTGCCGAGTTCTTGGCGGGGTACGGCCGCGGAGCACTCAGTGTGGAGGAATGCGTTGAGCTGATGAAGAGGATGGGGGAGGAGGGGCTGGCATTGGGGTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB651447             [                                                                                                                                                                                                                                                                                                                                                     AGCAGCCTTGTGAGCACCACCACGGCCATGGAAGAGATTCTCACCTTGGCGAGGAGCCCCGCGGTCGACGGGCAGGCGTTTGCCGAGTTCTTGGCGGGGTACGGCCGCGGAGCACTCAGTGTGGAGGAATGCGTTGAGCTGATGAGGAGGATGGGGGAGGAGGGGCTGGCATTGGGGTGTCTCCACCTTCTCCGATGGATGCAGGCTCCGGAGGAGGAGCCATTGTTGTTGCCCCCGCAGGCATGGCTGCTCGCTGTTGTGGCGCTTGGACGGGCTCAGATGGCCGATGAGGTGCTGGAGATTGTGGAGAGTTTGCCTCCCGAGAGGAGATTCAGTGAGGCTGTCCTTTACAATGCTGCAATGTCAGGCCTAGCCTATCGCGGAAGATATGATGATACCTGGAAAGTATTTAAGCTCATGGAAAAGAAAAATATCCAGCCTGACCACATGACATCCTTAATCATGTTAGATGTAATGAACAAGAGCAAGACATCTGCCAAGGATGCATGGGAATTCTTCCAACGGATGGAAAGAAAAGGTGTCAAGTGGAGCTTGGACATTTGTATTTCTCTTATCAAGATCTTTTGTGACAACGGTCTGAAAACTGAAGCTCTTATCATACAGTCAGCAATGGAGAAGAAAGGAATTGCATCAAACACGAGCATGTATAACACATTAATAAATGCTTACTGCAAAGCCAATCAAATTGAAGAGGCAGAGGGAGTTTTCGTTGAGATGAAAGAGAAAGGCTTGAGTGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB096464             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAAGAGCAAGACATCTGCCAAGGATGCATGGGAATTCTTCC ACGGATGGAAAGAAAAGGTGTCAAGTGGAGCTTGGACATTTGTATTTCTCTTATCAAGATCTTTTGTGACAACGGTCTGAAAACTGAAGCTCTTATCATACAGTCAGCAATGGAGAAGAAAGGAATTGCATCAAACACGAGCATGTATAACACATTAATAAATGCTTACTGCAAAGCCAATCAAATTGAAGAGGCAGAGGGAGTTTTCGTTGAGATGAAAGAGAAAGGCTTGAGTGCGACAGCAATGACCTATAATATCCTTATGGGTGCTTACTGTAGAAGATTGCAGCCAGAAGTTGTTGAGTCTTTACTGCTGGAGATGCAAGATTTAGGACTACGACCAAATGCGAGACCATACAACTTTCTCATACGTGTTTATGGGCAACAGAAGAAAATGAGTGAAAAGGCTGAAGATGCTTTCTTAAGGATGAAGACAGATGGCATTATGCCAACGTCTTCTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATTTGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTNCTTAGAAACATATACAGCATTGATTGACATGNTTAGGANGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAATGATCAATGGAAAGGGTCCTGGAACTAGGGTAATATTNCACATGGNGCTTGGTGGACTGGCAAAACATGGGCTGGATGNTCAGGCAACGGATGGTNTATATGAGTTTAAAAGGGCTGGTTTGCAGCCTACCGNAATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA766629             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAAGAAAATGAGTGAAAAGGCTGAAGATGCTTTCTTAAGGATGAAGACAGATGGCATTATGCCAACGTCTTCTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATTTGACTTATGTGGGTATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCATTGATTGACATGTTTAGGAGGGCTGGTGACACAGAGAAGCTAATGGAGACATGGAGATCAATGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTTTGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTGTAACATACTCCACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTCTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGNTAGTTCATATAAAAAGNTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAGTGGGAATCTT AAANGNANGTCCAGCCTAAAACATAGGAAGGAGAANAAGGATGAGTTTTTGGAANAACAGAAAAAAAACGNTCTATGATGAANCATGTCTTTTGGGTACCCNAGGNAAAANATTTTTG                                                                                                                                                                     ]
[+] EMBL AK104944             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGTGAAAAGGCTGAAGATGCTTTCTTAAGGATGAAGACAGATGGCATTATGCCAACGTCTTCTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATTTGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCATTGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAATGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTTTGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTGTAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTCTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGTTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAGTGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAG TTTTGGAAGAACAG AAAAAAACGTTCTATGATGAACCATGTC TATGGGTACCCAAGG AAAAGATTTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTCTGGATGTTCATCCCTTATCCATTACAGCAGCATATAAAATG                                                                                  ]
[-] EMBL CB651448             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGATTGCATGAAAAGGCTTATTTGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCATTGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAATGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTTTGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTGTAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTCTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGTTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAGTGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAG TTTTGGAAGAACAG AAAAAAACGTTCTATGATGAACCATGTC TATGGGTACCCAAGG AAAAGATTTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTCTGGATGTTCATCCCTTATCCATTACAGCAGCATATAAAATGAACTTTCAGGAAGTTCATGGTGTTCATATTTTAATTCTCTTAAAGCATTCAAGTCAAAAATACGGTTAAAGTAT        ]
[-] EMBL CB650909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAAGGACTTAAGCCTTCCTTAGAAACATATACAGCATTGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAATGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTTTGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTGTAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTCTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGTTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAGTGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAG TTTTGGAAGAACAG AAAAAAACGTTCTATGATGAACCATGTC TATGGGTACCCAAGG AAAAGATTTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTCTGGATGTTGGTCCCTTATCCATTACAGCAGCATATAAAATGAACTTTCAGGAAGTTCATGGTGTTCATATTTTAATTCTATGGAAGCATTCAAGTCAAAAATACGGTTAAAGTAT        ]
[-] EMBL CA762436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTNTGCAGCCTACCGTAATGACATACAACACTNTGATGAATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTGTAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTCTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGTTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAGTGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAG TTTTGGAAGAACAG AAAAGAACGTTCTATGATGAACCATGTC TATGGGTACCCAAGG AAAAGATTTTTGTGATGCTTTTTTTATGTGTACATTAGACCATACCTTGTATTCTGGATGTTCATCCCTTATCCATTACAGCAGCATATAAAATGAACTTTCAGGAAGTTCATGGTGTTCATATTTTAATTCTCTTAAAGCATTCAAGTCAAAAATACGGTTAAAGTATCAAAAAAA]




>consensus_12284#0
AGGAGGAGTGGAGATGGGCACCATCTGCCGGCCCCTCCGGAGCTCACCTCGTCGGCGCGG
TGGACGAAGACGATAGTGTTGGCGAGGGCGGGGGCGGCGTCGGGTGGGGCGCACCCGATG
GCGACGCTGCCGGGGGATCGGGGATTCGAGAATCCGGTGTGGACGACGGCGGGCAGGTGG
GCGAGTGGGACCTCCCTATGAGCTCCTTTCGGGGGCGGGTTCAGGTACAGCATCACCAAG
AAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGACGAAGATGGAGGTGGCTGCGAATGGT
CGGACCCGGGTTTCTTCTTGCGAGGCCAAGAGGAGGAGGCCAGCAGCAGCGTGAGCACCA
CCACGGCCATGGAAGAGATTCTCACCTTGGCGAGGAGCCCCGCGGTCGACGGGCAGGCGT
TTGCCGAGTTCTTGGCGGGGTACGGCCGCGGAGCACTCAGTGTGGAGGAATGCGTTGAGC
TGATGAGGAGGATGGGGGAGGAGGGGCTGGCATTGGGGTGTCTCCACCTTCTCCGATGGA
TGCAGGCTCCGGAGGAGGAGCCATTGTTGTTGCCCCCGCAGGCATGGCTGCTCGCTGTTG
TGGCGCTTGGACGGGCTCAGATGGCCGATGAGGTGCTGGAGATTGTGGAGAGTTTGCCTC
CCGAGAGGAGATTCAGTGAGGCTGTCCTTTACAATGCTGCAATGTCAGGCCTAGCCTATC
GCGGAAGATATGATGATACCTGGAAAGTATTTAAGCTCATGGAAAAGAAAAATATCCAGC
CTGACCACATGACATCCTTAATCATGTTAGATGTAATGAACAAGAGCAAGACATCTGCCA
AGGATGCATGGGAATTCTTCCAACGGATGGAAAGAAAAGGTGTCAAGTGGAGCTTGGACA
TTTGTATTTCTCTTATCAAGATCTTTTGTGACAACGGTCTGAAAACTGAAGCTCTTATCA
TACAGTCAGCAATGGAGAAGAAAGGAATTGCATCAAACACGAGCATGTATAACACATTAA
TAAATGCTTACTGCAAAGCCAATCAAATTGAAGAGGCAGAGGGAGTTTTCGTTGAGATGA
AAGAGAAAGGCTTGAGTGCGACAGCAATGACCTATAATATCCTTATGGGTGCTTACTGTA
GAAGATTGCAGCCAGAAGTTGTTGAGTCTTTACTGCTGGAGATGCAAGATTTAGGACTAC
GACCAAATGCGAGATCATACAACTTTCTCATACGTGTTTATGGGCAACAGAAGAAAATGA
GTGAAAAGGCTGAAGATGCTTTCTTAAGGATGAAGACAGATGGCATTATGCCAACGTCTT
CTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATT
TGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCAT
TGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAA
TGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGG
CAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTT
TGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAAC
ATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTG
TAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTCT
ATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGT
TATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAG
TGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAGTTTT
GGAAGAACAGAAAAAAACGTTCTATGATGAACCATGTCTATGGGTACCCAAGGAAAAGAT
TTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTCTGGATGTTCATCC
CTTATCCATTACAGCAGCATATAAAATGAACTTTCAGGAAGTTCATGGTGTTCATATTTT
AATTCTCTTAAAGCATTCAAGTCAAAAATACGGTTAAAGTATCAAAAAAA

consensusID : consensus_12284#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 855
fasta sequence

                              [CAGATGGCATTATGCCAACGTCTTCTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATTTGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCATTGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAATGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTTTGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTGTAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTTTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGTTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAGTGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAGTTTTGGAAGAACAGAAAAAAACGTTTTATGATGAACCATGTCTATGGGTACCCAAGGAAAAGATTTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTTTGGATGTTCATCCCTTATCCATTACAGCAGCATATAAAATGAACTTTCAGGAAAAAAAAAAAGG]

[-] EMBL CB668346             [CAGATGGCATTATGCCAACGTCTTCTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATTTGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCATTGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAATGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTTTGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTGTAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTTTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGTTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAGTGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAGTTTTGGAAGAACAGAAAAAAACGTTTTATGATGAACCATGTCTATGGGTACCCAAGGAAAAGATTTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTTTGGATGTTCATCCCTTATCCATTACAGCAGCATATAAAATGAACTTTCAGGAAAAAAAAAAAGG]




>consensus_12284#1
CAGATGGCATTATGCCAACGTCTTCTACATACACTTCACTGCTTTGTGCATATGCAGTTA
ATGGATTGCATGAAAAGGCTTATTTGACTTATGTGGATATGAAAAGAGAAGGACTTAAGC
CTTCCTTAGAAACATATACAGCATTGATTGACATGTTTAGGAGGGCTGGTGACACGGAGA
AGCTAATGGAGACATGGAGATCAATGATCAATGAAAAGGTTCCTGGAACTAGGGTAATAT
TCCACATGGTGCTTGATGGTCTGGCAAAACATGGGCTGTATGTTCAGGCAACGGATGTTA
TATATGAGTTTAGAAGGGCTGGTTTGCAGCCTACCGTAATGACATACAACATTTTGATGA
ATGCTTTTGCAAGGGGAGGACAACATTATAAATTACCCCAACTCTTGAAAGAGATGGCTG
CTATGGAATTAAAACCAGATTCTGTAACATACTCTACAATGATTTATGCGTATGCCCGTG
TTCGTGACTTTTCGAGAGCATTTTATTACCACAAGCTGATGGTTCGAAGTGGACAATTGC
CTGATGTTAGTTCATATAAAAAGTTATTGAATACATTGGATGTGAAAGCTGCAAGAAAGA
ACATAAAGGATAAGAATGCCATAGTGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATA
GGAAGGAGAAGAAGGATGAGTTTTGGAAGAACAGAAAAAAACGTTTTATGATGAACCATG
TCTATGGGTACCCAAGGAAAAGATTTTTGTGATGCTTTTCTTATGTGTACATTAGACCAT
ACCTTGTATTTTGGATGTTCATCCCTTATCCATTACAGCAGCATATAAAATGAACTTTCA
GGAAAAAAAAAAAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12284#0      AGGAGGAGTGGAGATGGGCACCATCTGCCGGCCCCTCCGGAGCTCACCTCGTCGGCGCGG 60
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      TGGACGAAGACGATAGTGTTGGCGAGGGCGGGGGCGGCGTCGGGTGGGGCGCACCCGATG 120
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      GCGACGCTGCCGGGGGATCGGGGATTCGAGAATCCGGTGTGGACGACGGCGGGCAGGTGG 180
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      GCGAGTGGGACCTCCCTATGAGCTCCTTTCGGGGGCGGGTTCAGGTACAGCATCACCAAG 240
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      AAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGACGAAGATGGAGGTGGCTGCGAATGGT 300
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      CGGACCCGGGTTTCTTCTTGCGAGGCCAAGAGGAGGAGGCCAGCAGCAGCGTGAGCACCA 360
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      CCACGGCCATGGAAGAGATTCTCACCTTGGCGAGGAGCCCCGCGGTCGACGGGCAGGCGT 420
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      TTGCCGAGTTCTTGGCGGGGTACGGCCGCGGAGCACTCAGTGTGGAGGAATGCGTTGAGC 480
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      TGATGAGGAGGATGGGGGAGGAGGGGCTGGCATTGGGGTGTCTCCACCTTCTCCGATGGA 540
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      TGCAGGCTCCGGAGGAGGAGCCATTGTTGTTGCCCCCGCAGGCATGGCTGCTCGCTGTTG 600
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      TGGCGCTTGGACGGGCTCAGATGGCCGATGAGGTGCTGGAGATTGTGGAGAGTTTGCCTC 660
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      CCGAGAGGAGATTCAGTGAGGCTGTCCTTTACAATGCTGCAATGTCAGGCCTAGCCTATC 720
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      GCGGAAGATATGATGATACCTGGAAAGTATTTAAGCTCATGGAAAAGAAAAATATCCAGC 780
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      CTGACCACATGACATCCTTAATCATGTTAGATGTAATGAACAAGAGCAAGACATCTGCCA 840
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      AGGATGCATGGGAATTCTTCCAACGGATGGAAAGAAAAGGTGTCAAGTGGAGCTTGGACA 900
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      TTTGTATTTCTCTTATCAAGATCTTTTGTGACAACGGTCTGAAAACTGAAGCTCTTATCA 960
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      TACAGTCAGCAATGGAGAAGAAAGGAATTGCATCAAACACGAGCATGTATAACACATTAA 1020
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      TAAATGCTTACTGCAAAGCCAATCAAATTGAAGAGGCAGAGGGAGTTTTCGTTGAGATGA 1080
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      AAGAGAAAGGCTTGAGTGCGACAGCAATGACCTATAATATCCTTATGGGTGCTTACTGTA 1140
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      GAAGATTGCAGCCAGAAGTTGTTGAGTCTTTACTGCTGGAGATGCAAGATTTAGGACTAC 1200
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      GACCAAATGCGAGATCATACAACTTTCTCATACGTGTTTATGGGCAACAGAAGAAAATGA 1260
consensus_12284#1      ------------------------------------------------------------
                                                                                   

consensus_12284#0      GTGAAAAGGCTGAAGATGCTTTCTTAAGGATGAAGACAGATGGCATTATGCCAACGTCTT 1320
consensus_12284#1      ------------------------------------CAGATGGCATTATGCCAACGTCTT 24
                                                           ************************

consensus_12284#0      CTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATT 1380
consensus_12284#1      CTACATACACTTCACTGCTTTGTGCATATGCAGTTAATGGATTGCATGAAAAGGCTTATT 84
                       ************************************************************

consensus_12284#0      TGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCAT 1440
consensus_12284#1      TGACTTATGTGGATATGAAAAGAGAAGGACTTAAGCCTTCCTTAGAAACATATACAGCAT 144
                       ************************************************************

consensus_12284#0      TGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAA 1500
consensus_12284#1      TGATTGACATGTTTAGGAGGGCTGGTGACACGGAGAAGCTAATGGAGACATGGAGATCAA 204
                       ************************************************************

consensus_12284#0      TGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGG 1560
consensus_12284#1      TGATCAATGAAAAGGTTCCTGGAACTAGGGTAATATTCCACATGGTGCTTGATGGTCTGG 264
                       ************************************************************

consensus_12284#0      CAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTT 1620
consensus_12284#1      CAAAACATGGGCTGTATGTTCAGGCAACGGATGTTATATATGAGTTTAGAAGGGCTGGTT 324
                       ************************************************************

consensus_12284#0      TGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAAC 1680
consensus_12284#1      TGCAGCCTACCGTAATGACATACAACATTTTGATGAATGCTTTTGCAAGGGGAGGACAAC 384
                       ************************************************************

consensus_12284#0      ATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTG 1740
consensus_12284#1      ATTATAAATTACCCCAACTCTTGAAAGAGATGGCTGCTATGGAATTAAAACCAGATTCTG 444
                       ************************************************************

consensus_12284#0      TAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTCT 1800
consensus_12284#1      TAACATACTCTACAATGATTTATGCGTATGCCCGTGTTCGTGACTTTTCGAGAGCATTTT 504
                       ********************************************************** *

consensus_12284#0      ATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGT 1860
consensus_12284#1      ATTACCACAAGCTGATGGTTCGAAGTGGACAATTGCCTGATGTTAGTTCATATAAAAAGT 564
                       ************************************************************

consensus_12284#0      TATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAG 1920
consensus_12284#1      TATTGAATACATTGGATGTGAAAGCTGCAAGAAAGAACATAAAGGATAAGAATGCCATAG 624
                       ************************************************************

consensus_12284#0      TGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAGTTTT 1980
consensus_12284#1      TGGGAATCTTAAAAGGAAAGTCCAGCCTAAAACATAGGAAGGAGAAGAAGGATGAGTTTT 684
                       ************************************************************

consensus_12284#0      GGAAGAACAGAAAAAAACGTTCTATGATGAACCATGTCTATGGGTACCCAAGGAAAAGAT 2040
consensus_12284#1      GGAAGAACAGAAAAAAACGTTTTATGATGAACCATGTCTATGGGTACCCAAGGAAAAGAT 744
                       ********************* **************************************

consensus_12284#0      TTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTCTGGATGTTCATCC 2100
consensus_12284#1      TTTTGTGATGCTTTTCTTATGTGTACATTAGACCATACCTTGTATTTTGGATGTTCATCC 804
                       ********************************************** *************

consensus_12284#0      CTTATCCATTACAGCAGCATATAAAATGAACTTTCAGGAAGTTCATGGTGTTCATATTTT 2160
consensus_12284#1      CTTATCCATTACAGCAGCATATAAAATGAACTTTCAGGAAAAAAAAAAAGG--------- 855
                       ****************************************    *    *          

consensus_12284#0      AATTCTCTTAAAGCATTCAAGTCAAAAATACGGTTAAAGTATCAAAAAAA 2210
consensus_12284#1      --------------------------------------------------