cluster # 12294

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Oryza sativa
cluster # 12294 cluster # 12294 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12294#0 length = 1174 sequences # 4

consensus_12294#1 length = 1157 sequences # 5
consensus_12294#2 length = 332 sequences # 1

consensusID : consensus_12294#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1174
fasta sequence

                              [TGAATGAACTGAATTAGTGTGTGCGTGTTGTATCATCGGCCCGATCGAGAAGATGTCGAAGCTCCAACTCCGGCCGCCTCTGTTGGCTACTCTGCATTGCAGCTTGCTCGTGCTCCTCATCATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCGAGCTCACCGTCATCTGGGGCCGGAACAAGGACGAGGGCTCATTGCGTTCGACCTGCGACACCGGCCTCTACACCACCGTCGTCATCTCCTTCCTCACCGTCTTCGGCCACGGCCGCTACCGGACCGACCTCGCCGGCCACCCGCTCGCCGGCGTCGGCGCCGACGTCAAGCACTGCCAAAAGGCCAAGAACGTCACCGTCCTCCTCTCCATCGGCGGCGCCGGCGACCAGTACTCGCTGCCCACCGCCAAGTCGGCGCAGGACGTGGCCGAACACCTGTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTCCCGCCCGTTCGGCGACGCCGTGCTCGACGGCGTCGACGTCTACGTCGACCGCGGCCGGTGGGGCCACTACGACGAGCTCGCCAGGCGCCTGAGGAGCTTCGGTCGCGAGAAGCCGGCAGTGCGCCTGACGGCGTCGCCGGCGTGCTCGCTGGCGCTGTTCGACGACGAGGTGGAGACGATGAAGACGCTGTCGCTGTTCGAGCGGCTGCACGTGCGGTTCTACAACGAGAGCTCGTGCGACTACAACTACTTCGAGACGCGGCCGTTCTGGGGCGCGTGGAGGACGTGGACGTCGAGGTTCCCGGCGGCGCGGGTGCAGGTGGGGTGGCCGGCGATGGAGGAGATGAGCGGGTTCGTGGACCCGCAGACGCTGCGGGAGAGCGTGCTATCGTCGGTGCAGGACGATGCCAACTACGGCGGCGTCATGCTCTGGGATCGCTACTACGACAAGATCACCGGATTCGGCCGTGCCATCAAAGACATTGTCTAATTGCAATGTTACTCCAGTGTTTATACTACATGGTTCACTGTGTTGTTTACCAACCTGCATTGCGTCATCTGTTACTATCTGTACCCGTCTACTGGCATATGCATGTTCGTATGGGTCAGGCTTGAAAGTAGTATGATTATGTTAATTTAGTTTTGAAATATAAAAGAATCCAGCATGTTTCACTGTGCTGTTTACCATAGTTGCATTGCATTA]

[+] EMBL AK101155             [TGAATGAACTGAATTAGTGTGTGCGTGTTGTATCATCGGCCCGATCGAGAAGATGTCGAAGCTCCAACTCCGGCCGCCTCTGTTGGCTACTCTGCATTGCAGCTTGCTCGTGCTCCTCATCATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCGAGCTCACCGTCATCTGGGGCCGGAACAAGGACGAGGGCTCATTGCGTTCGACCTGCGACACCGGCCTCTACACCACCGTCGTCATCTCCTTCCTCACCGTCTTCGGCCACGGCCGCTACCGGACCGACCTCGCCGGCCACCCGCTCGCCGGCGTCGGCGCCGACGTCAAGCACTGCCAAAAGGCCAAGAACGTCACCGTCCTCCTCTCCATCGGCGGCGCCGGCGACCAGTACTCGCTGCCCACCGCCAAGTCGGCGCAGGACGTGGCCGAACACCTGTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTCCCGCCCGTTCGGCGACGCCGTGCTCGACGGCGTCGACGTCTACGTCGACCGCGGCCGGTGGGGCCACTACGACGAGCTCGCCAGGCGCCTGAGGAGCTTCGGTCGCGAGAAGCCGGCAGTGCGCCTGACGGCGTCGCCGGCGTGCTCGCTGGCGCTGTTCGACGACGAGGTGGAGACGATGAAGACGCTGTCGCTGTTCGAGCGGCTGCACGTGCGGTTCTACAACGAGAGCTCGTGCGACTACAACTACTTCGAGACGCGGCCGTTCTGGGGCGCGTGGAGGACGTGGACGTCGAGGTTCCCGGCGGCGCGGGTGCAGGTGGGGTGGCCGGCGATGGAGGAGATGAGCGGGTTCGTGGACCCGCAGACGCTGCGGGAGAGCGTGCTATCGTCGGTGCAGGACGATGCCAACTACGGCGGCGTCATGCTCTGGGATCGCTACTACGACAAGATCACCGGATTCGGCCGTGCCATCAAAGACATTGTCTAATTGCAATGTTACTCCAGTGTTTATACTACATGGTTCACTGTGTTGTTTACCAACCTGCATTGCGTCATCTGTTACTATCTGTACCCGTCTACTGGCATATGCATGTTCGTATGGGTCAGGCTTGAAAGTAGTATGATTATGTTAATTTAGTTTTGAAATATAAAAGAATCCAGCATGTTTCACTGTGCTGTTTACCATAGTTGCATTGCATTA]
[+] EMBL AK102649             [    TGAACTGAATTAGTGTGTGCGTGTTGTATCATCGGCCCGATCGAGAAGATGTCGAAGCTCCAACTCCGGCCGCCTCTGTTGGCTACTCTGCATTGCAGCTTGCTCGTGCTCCTCATCATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCGAGCTCACCGTCATCTGGGGCCGGAACAAGGACGAGGGCTCATTGCGTTCGACCTGCGACACCGGCCTCTACACCACCGTCGTCATCTCCTTCCTCACCGTCTTCGGCCACGGCCGCTACCGGACCGACCTCGCCGGCCACCCGCTCGCCGGCGTCGGCGCCGACGTCAAGCACTGCCAAAAGGCCAAGAACGTCACCGTCCTCCTCTCCATCGGCGGCGCCGGCGACCAGTACTCGCTGCCCACCGCCAAGTCGGCGCAGGACGTGGCCGAACACCTGTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTCCCGCCCGTTCGGCGACGCCGTGCTCGACGGCGTCGACGTCTACGTCGACCGCGGCCGGTGGGGCCACTACGACGAGCTCGCCAGGCGCCTGAGGAGCTTCGGTCGCGAGAAGCCGGCAGTGCGCCTGACGGCGTCGCCGGCGTGCTCGCTGGCGCTGTTCGACGACGAGGTGGAGACGATGAAGACGCTGTCGCTGTTCGAGCGGCTGCACGTGCGGTTCTACAACGAGAGCTCGTGCGACTACAACTACTTCGAGACGCGGCCGTTCTGGGGCGCGTGGAGGACGTGGACGTCGAGGTTCCCGGCGGCGCGGGTGCAGGTGGGGTGGCCGGCGATGGAGGAGATGAGCGGGTTCGTGGACCCGCAGACGCTGCGGGAGAGCGTGCTATCGTCGGTGCAGGACGATGCCAACTACGGCGGCGTCATGCTCTGGGATCGCTACTACGACAAGATCACCGGATTCGGCCGTGCCATCAAAGACATTGTCTAATTGCAATGTTACTCCAGTGTTTATACTACATGGTTCACTGTGTTGTTTACCAACCTGCATTGCGTCATCTGTTACTATCTGTACCCGTCTACTGGCATATGCATGTTCGTATGGGTCAGGCTTGAAAGTAGTATGATTATGTTAATTTAGTTTTGAAATATAAAAGAATCCAGCATGTTTCACTGT                           ]
[+] EMBL AU197561             [          GAATTAGTGTGTGCGTGTTGTATCATCGGCCCGATCGAGAAGATGTCGAAGCTCCAACTCCGGCCGCCTCTGTTGGCTACTCTGCATTGCAGCTTGCTCGTGCTCCTCATCATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCGAGCTCACCGTCATCTGGGGCCGGAACAAGGACGAGGGCTCATTGCGTTCGACCTGCGACACCGGCCTCTACACCACCGTCGTCATCTCCTTCCTCACCGTCTTCGGCCACGGCCGCTACCGGACCGACCTCGCCGGCCACCCGCTCGCCGGCGTCGGCGCCGACGTCAAGCACTGCCAAAAGGCCAAGAACGTCACCGTCCTCCTCTCCATCGGCGGCGCCGGCGACCAGTACTCGCTGCCCACCGCCAAGTCGGCGCAGGACGTGGCCGAACACCTGTGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK073595             [             TTAGTGTGTGCGTGTTGTATCATCGGCCCGATCGAGAAGATGTCGAAGCTCCAACTCCGGCCGCCTCTGTTGGCTACTCTGCATTGCAGCTTGCTCGTGCTCCTCATCATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCGAGCTCACCGTCATCTGGGGCCGGAACAAGGACGAGGGCTCATTGCGTTCGACCTGCGACACCGGCCTCTACACCACCGTCGTCATCTCCTTCCTCACCGTCTTCGGCCACGGCCGCTACCGGACCGACCTCGCCGGCCACCCGCTCGCCGGCGTCGGCGCCGACGTCAAGCACTGCCAAAAGGCCAAGAACGTCACCGTCCTCCTCTCCATCGGCGGCGCCGGCGACCAGTACTCGCTGCCCACCGCCAAGTCGGCGCAGGACGTGGCCGAACACCTGTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTCCCGCCCGTTCGGCGACGCCGTGCTCGACGGCGTCGACGTCTACGTCGACCGCGGCCGGTGGGGCCACTACGACGAGCTCGCCAGGCGCCTGAGGAGCTTCGGTCGCGAGAAGCCGGCAGTGCGCCTGACGGCGTCGCCGGCGTGCTCGCTGGCGCTGTTCGACGACGAGGTGGAGACGATGAAGACGCTGTCGCTGTTCGAGCGGCTGCACGTGCGGTTCTACAACGAGAGCTCGTGCGACTACAACTACTTCGAGACGCGGCCGTTCTGGGGCGCGTGGAGGACGTGGACGTCGAGGTTCCCGGCGGCGCGGGTGCAGGTGGGGTGGCCGGCGATGGAGGAGATGAGCGGGTTCGTGGACCCGCAGACGCTGCGGGAGAGCGTGCTATCGTCGGTGCAGGACGATGCCAACTACGGCGGCGTCATGCTCTGGGATCGCTACTACGACAAGATCACCGGATTCGGCCGTGCCATCAAAGACATTGTCTAATTGCAATGTTACTCCAGTGTTTATACTACATGGTTCACTGTGTTGTTTACCAACCTGCATTGCGTCATCTGTTACTATCTGTACCCGTCTACTGGCATATGCATGTTCGTATGGGTCAGGCTTGAAAGTAGTATGATTATGTTAATTTAGTTTTGAAATATAAAAGAATCCAGCATGTTTCACTGT                           ]




>consensus_12294#0
TGAATGAACTGAATTAGTGTGTGCGTGTTGTATCATCGGCCCGATCGAGAAGATGTCGAA
GCTCCAACTCCGGCCGCCTCTGTTGGCTACTCTGCATTGCAGCTTGCTCGTGCTCCTCAT
CATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCGAGCTCACCGTCATCTGGGGCCGGAA
CAAGGACGAGGGCTCATTGCGTTCGACCTGCGACACCGGCCTCTACACCACCGTCGTCAT
CTCCTTCCTCACCGTCTTCGGCCACGGCCGCTACCGGACCGACCTCGCCGGCCACCCGCT
CGCCGGCGTCGGCGCCGACGTCAAGCACTGCCAAAAGGCCAAGAACGTCACCGTCCTCCT
CTCCATCGGCGGCGCCGGCGACCAGTACTCGCTGCCCACCGCCAAGTCGGCGCAGGACGT
GGCCGAACACCTGTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTCCCGCCCGTT
CGGCGACGCCGTGCTCGACGGCGTCGACGTCTACGTCGACCGCGGCCGGTGGGGCCACTA
CGACGAGCTCGCCAGGCGCCTGAGGAGCTTCGGTCGCGAGAAGCCGGCAGTGCGCCTGAC
GGCGTCGCCGGCGTGCTCGCTGGCGCTGTTCGACGACGAGGTGGAGACGATGAAGACGCT
GTCGCTGTTCGAGCGGCTGCACGTGCGGTTCTACAACGAGAGCTCGTGCGACTACAACTA
CTTCGAGACGCGGCCGTTCTGGGGCGCGTGGAGGACGTGGACGTCGAGGTTCCCGGCGGC
GCGGGTGCAGGTGGGGTGGCCGGCGATGGAGGAGATGAGCGGGTTCGTGGACCCGCAGAC
GCTGCGGGAGAGCGTGCTATCGTCGGTGCAGGACGATGCCAACTACGGCGGCGTCATGCT
CTGGGATCGCTACTACGACAAGATCACCGGATTCGGCCGTGCCATCAAAGACATTGTCTA
ATTGCAATGTTACTCCAGTGTTTATACTACATGGTTCACTGTGTTGTTTACCAACCTGCA
TTGCGTCATCTGTTACTATCTGTACCCGTCTACTGGCATATGCATGTTCGTATGGGTCAG
GCTTGAAAGTAGTATGATTATGTTAATTTAGTTTTGAAATATAAAAGAATCCAGCATGTT
TCACTGTGCTGTTTACCATAGTTGCATTGCATTA

consensusID : consensus_12294#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1157
fasta sequence

                              [CTAATTAAGCCATCGTATCATATCAGCCATGGCGCGCCACCAGCTATGTCTCTTGACGACGACGATGCTAGTAGCCGTCGTCGTCTTCCTCCCGTGCCTCGCCACCGCCACCGGAAAGACCGGCCAGATCGCCGTCTTCTGGGGCCGCAACAAGACGGAGGGCTCACTGAAGGAGGCCTGCGACACCGGCCTCTACACCACCGTCATCATCTCCTTCTTCAGCGTCTTCGGCCACGGCCGCTACTGGACCGACCTCTCCGGCCACGATGTCTCCCGAGTCGGCGCCGACGTCAAGCACTGCCAGTCCAAGAACATCCCCGTCCTCCTCTCCGTCGGCGGCGACGGCTACCAGTACTCGCTCCCCACCGCCAATTCGGCCAAGGACGTCGCGGACCACCTCTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTTCCGCCCCTTCGGCGACGCCGTGCTCGACGGCGTCGACCTCTACATCGACCACGGCGGGCCGGCGAACTACGACGTGCTGGTCCGGCGCCTCGCCGGCTACCGCGGCAAGCCGGTGCTGCTGACGGCGACGCCGAGGTGCGTGTACCCGGACGCGAACGCG--GGCGGCGCTGGGGACGGGGCTGGTGCGGCGCATCCACCCGCGGTTCTACGGCGACGCGGCGTGCACGAACAAGACCGACGGCGAGGGGCGGAGGAGCCTGTTCGACTGGGAGGACTGGGACGCGTGGACGTCGCGGTTCCCGGCGAGCCAGGTGTACGTGGGGCTTCCGGCGGAGGAGACGGCGGCGGACTGGATAAACCCGGAGTCGCTCTACTACGCCGTGATGCAGAGGGCGCAGACAGCGAGCAACTACGGCGGCGCCATGCTGTGGGACCGAGGCGCCGACAAAGCCTACGATAACTACTACGGCAGGGCGCTCAAGGACTTCGTTTGATCGATTCTCACATTCAATCCGGCCGCCATTGCTGCTTCATCGGAGCTTCAATTCGATCAACTTCTTCTTCCCAATAGTATATGCATGATTGTGTATAATAATGGAGCCAGCTTTGAATTTGTTTGCGTAGCGTGTGTACGTGTGCGCGTATGTAATTTGTGAGTGTCTCTCAGGGTGCTGTATGCTTGAATTAAGGTACATGAACAATAAATTCAAGTAAAAAAA]

[+] EMBL AK102505             [CTAATTAAGCCATCGTATCATATCAGCCATGGCGCGCCACCAGCTATGTCTCTTGACGACGACGATGCTAGTAGCCGTCGTCGTCTTCCTCCCGTGCCTCGCCACCGCCACCGGAAAGACCGGCCAGATCGCCGTCTTCTGGGGCCGCAACAAGACGGAGGGCTCACTGAAGGAGGCCTGCGACACCGGCCTCTACACCACCGTCATCATCTCCTTCTTCAGCGTCTTCGGCCACGGCCGCTACTGGACCGACCTCTCCGGCCACGATGTCTCCCGAGTCGGCGCCGACGTCAAGCACTGCCAGTCCAAGAACATCCCCGTCCTCCTCTCCGTCGGCGGCGACGGCTACCAGTACTCGCTCCCCACCGCCAATTCGGCCAAGGACGTCGCGGACCACCTCTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTTCCGCCCCTTCGGCGACGCCGTGCTCGACGGCGTCGACCTCTACATCGACCACGGCGGGCCGGCGAACTACGACGTGCTGGTCCGGCGCCTCGCCGGCTACCGCGGCAAGCCGGTGCTGCTGACGGCGACGCCGAGGTGCGTGTACCCGGACGCGAACGCG  GGCGGCGCTGGGGACGGGGCTGGTGCGGCGCATCCACCCGCGGTTCTACGGCGACGCGGCGTGCACGAACAAGACCGACGGCGAGGGGCGGAGGAGCCTGTTCGACTGGGAGGACTGGGACGCGTGGACGTCGCGGTTCCCGGCGAGCCAGGTGTACGTGGGGCTTCCGGCGGAGGAGACGGCGGCGGACTGGATAAACCCGGAGTCGCTCTACTACGCCGTGATGCAGAGGGCGCAGACAGCGAGCAACTACGGCGGCGCCATGCTGTGGGACCGAGGCGCCGACAAAGCCTACGATAACTACTACGGCAGGGCGCTCAAGGACTTCGTTTGATCGATTCTCACATTCAATCCGGCCGCCATTGCTGCTTCATCGGAGCTTCAATTCGATCAACTTCTTCTTCCCAATAGTATATGCATGATTGTGTATAATAATGGAGCCAGCTTTGAATTTGTTTGCGTAGCGTGTGTACGTGTGCGCGTATGTAATTTGTGAGTGTCTCTCAGGGTGCTGTATGCTTGAATTAAGGTACATGAACAATAAATTCA          ]
[+] EMBL AU165978             [               TATCATATCAGCCATGGCGCGCCACCAGCTATGTCTCTTGACGACGACGATGCTAGTAGCCGTCGTCGTCTTCCTCCCGTGCCTCGCCACCGCCACCGGAAAGACCGGCCAGATCGCCGTCTTCTGGGGCCGCAACAAGACGGAGGGCTCACTGAAGGAGGCCTGCGACACCGGCCTCTACACCACCGTCATCATCTCCTTCTTCAGCGTCTTCGGCCACGGCCGCTACTGGACCGACCTCTCCGGCCACGATGTCTCCCGAGTCGGCGCCGACGTCAAGCACTGCCAGTCCAAGAACATCCCCGTCCTCCTCTCCGTCGGCGGCGACGGCTACCAGTACTCGCTCCCCACCGCCAATTCGGCCAAGGACGTCGCGGACCACCTCTGGCACGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF305855             [                                                                                                                                                                                                                                                                                                                                                                                                                                              GGCGTGTTCCGCCCCTTCGGCGACGCCTTGCTCGACGGCGTCGACCTCTACATCGACCACGGCGGGCCGGCGAACTACGACGTGCTGGTCCGGCGCCTCGCCGGCTACCGCGGCAAGCCGGTGCTGCTGATGGCGACGCCGAGGTGCGTGTACCCGGACGCGAACGCGGCGGCGGCGCTGTGTACGGGGCTGGTGCGGCGCATCCACCCGCGGTTCTACGGCGACGCGGCGTGCACGAACAAGACCGACGGCGAGGGGCGGAGGAGCCTGTTCGACTGGGAGGACTGGGACGCGTGGACGTCGCGGTTCCCGGCGAGCCAGGTGTACGTGGGGCTTCCGGCGGAGGAGACGGCGGCGGACTGGATAAACCCGGAGTCGCTCTACTACGCCGTGATGCAGAGGGCGCAGACAGCGAGCAACTACGGCGGCGCCATGCTGTGGGACCGAGGCGCCGACAAAGCCTACGATAACTACTACGGCAGGGCGCTCAAGGACTTCGTTTGATCGATTCTCACATTCAATCCGGCCGCCATTGCTGCTTCATCGGAGCTTCAATTCGATCAACTTCTTCTTCCCAATAGTATATGCATGATTGTGTATAAT                                                                                                                              ]
[+] EMBL CF332446             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GATCGATTCTCACATTCAATCCGGCCGCCATTGCTGCTTCATCGGAGCTTCAATTCGATCAACTTCTTCTTCCCAATAGTATATGCATGATTGTGTATAATAATGGAGCCAGCTTTGAATTTGTTTGCGTAGCGTGTGTACGTGTGCGCGTATGTAATTTGTGAGTGTCTCTCAGGGTGCTGTATGCTTGAATTAAGGTACATGAACAATAAATTCAAGTAAAAAA ]
[-] EMBL CF332445             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCGATTCTCACATTCAATCCGGCCGCCATTGCTGCTTCATCGGAGCTTCAATTCGATCAACTTCTTCTTCCCAATAGTATATGCATGATTGTGTATAATAATGGAGCCAGCTTTGAATTTGTTTGCGTAGCGTGTGTACGTGTGCGCGTATGTAATTTGTGAGTGTCTCTCAGGGTGCTGTATGCTTGAATTAAGGTACATGAACAATAAATTCAAGTAAAAAAA]




>consensus_12294#1
CTAATTAAGCCATCGTATCATATCAGCCATGGCGCGCCACCAGCTATGTCTCTTGACGAC
GACGATGCTAGTAGCCGTCGTCGTCTTCCTCCCGTGCCTCGCCACCGCCACCGGAAAGAC
CGGCCAGATCGCCGTCTTCTGGGGCCGCAACAAGACGGAGGGCTCACTGAAGGAGGCCTG
CGACACCGGCCTCTACACCACCGTCATCATCTCCTTCTTCAGCGTCTTCGGCCACGGCCG
CTACTGGACCGACCTCTCCGGCCACGATGTCTCCCGAGTCGGCGCCGACGTCAAGCACTG
CCAGTCCAAGAACATCCCCGTCCTCCTCTCCGTCGGCGGCGACGGCTACCAGTACTCGCT
CCCCACCGCCAATTCGGCCAAGGACGTCGCGGACCACCTCTGGCACGCCTACCTCGGCGG
CGGCCGCAGGGGCGTGTTCCGCCCCTTCGGCGACGCCGTGCTCGACGGCGTCGACCTCTA
CATCGACCACGGCGGGCCGGCGAACTACGACGTGCTGGTCCGGCGCCTCGCCGGCTACCG
CGGCAAGCCGGTGCTGCTGACGGCGACGCCGAGGTGCGTGTACCCGGACGCGAACGCGGG
CGGCGCTGGGGACGGGGCTGGTGCGGCGCATCCACCCGCGGTTCTACGGCGACGCGGCGT
GCACGAACAAGACCGACGGCGAGGGGCGGAGGAGCCTGTTCGACTGGGAGGACTGGGACG
CGTGGACGTCGCGGTTCCCGGCGAGCCAGGTGTACGTGGGGCTTCCGGCGGAGGAGACGG
CGGCGGACTGGATAAACCCGGAGTCGCTCTACTACGCCGTGATGCAGAGGGCGCAGACAG
CGAGCAACTACGGCGGCGCCATGCTGTGGGACCGAGGCGCCGACAAAGCCTACGATAACT
ACTACGGCAGGGCGCTCAAGGACTTCGTTTGATCGATTCTCACATTCAATCCGGCCGCCA
TTGCTGCTTCATCGGAGCTTCAATTCGATCAACTTCTTCTTCCCAATAGTATATGCATGA
TTGTGTATAATAATGGAGCCAGCTTTGAATTTGTTTGCGTAGCGTGTGTACGTGTGCGCG
TATGTAATTTGTGAGTGTCTCTCAGGGTGCTGTATGCTTGAATTAAGGTACATGAACAAT
AAATTCAAGTAAAAAAA

consensusID : consensus_12294#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 332
fasta sequence

                              [TNGAATTAGTGTGTNCTTNTNGTATCATCNCANCGATCGAAAAGATGTCGAAGCTCCAACTCCGGCCGCCTCTNTTGGCTACTCTGCATTGCAGCTTGCTCGTNCTCCTNATCATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCNAGCTCACCGTAATCTGGGGCCGGAACAAGGACGAGGGCTCATTGCNTTCNACCTGCNACACCGGCCTCTACACCACCGTNGTNATCTCCTTCCTCACCGTCTTCGGCCACGGCCGCTTACCGGACCGACCTCGACGGCCACCCGCTCGCNGGCGTCGGCGNCGACGTCAAGCACTTGCCAAAAGG]

[+] EMBL AU063747             [TNGAATTAGTGTGTNCTTNTNGTATCATCNCANCGATCGAAAAGATGTCGAAGCTCCAACTCCGGCCGCCTCTNTTGGCTACTCTGCATTGCAGCTTGCTCGTNCTCCTNATCATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCNAGCTCACCGTAATCTGGGGCCGGAACAAGGACGAGGGCTCATTGCNTTCNACCTGCNACACCGGCCTCTACACCACCGTNGTNATCTCCTTCCTCACCGTCTTCGGCCACGGCCGCTTACCGGACCGACCTCGACGGCCACCCGCTCGCNGGCGTCGGCGNCGACGTCAAGCACTTGCCAAAAGG]




>consensus_12294#2
TNGAATTAGTGTGTNCTTNTNGTATCATCNCANCGATCGAAAAGATGTCGAAGCTCCAAC
TCCGGCCGCCTCTNTTGGCTACTCTGCATTGCAGCTTGCTCGTNCTCCTNATCATCAATG
GCGCCGCCGCTGCCGGCAAGACCGGCNAGCTCACCGTAATCTGGGGCCGGAACAAGGACG
AGGGCTCATTGCNTTCNACCTGCNACACCGGCCTCTACACCACCGTNGTNATCTCCTTCC
TCACCGTCTTCGGCCACGGCCGCTTACCGGACCGACCTCGACGGCCACCCGCTCGCNGGC
GTCGGCGNCGACGTCAAGCACTTGCCAAAAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12294#0      TGAATGAACTGAATTAGTGTGTGCGTGTTGTATCATCGGCCCGATCGAGAAGATGTCGAA 60
consensus_12294#2      --------TNGAATTAGTGTGTNCTTNTNGTATCATCNCANCGATCGAAAAGATGTCGAA 52
consensus_12294#1      -----------------------CTAATTAAGCCATCGTATC-ATATCAGCCATGGCGCG 36
                                              *   *     ****    * **       *** **  

consensus_12294#0      GCTCCAACTCCGGCCGCCTCTGTTGGCTACTCTGCATTGCAGCTTGCTCGTGCTCCTCAT 120
consensus_12294#2      GCTCCAACTCCGGCCGCCTCTNTTGGCTACTCTGCATTGCAGCTTGCTCGTNCTCCTNAT 112
consensus_12294#1      CCACCAGCTATGTC---TCTTGACGACGACGATGC-TAGTAGCCG--TCGTCGTCTTCCT 90
                        * *** **  * *      *   * * **  *** * * ***    ****  ** *  *

consensus_12294#0      CATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCGAGCTCACCGTCATCTGGGGCCGGAA 180
consensus_12294#2      CATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCNAGCTCACCGTAATCTGGGGCCGGAA 172
consensus_12294#1      CCCGTGCCTCGCCACCGCCACCGGAAAGACCGGCCAGATCGCCGTCTTCTGGGGCCGCAA 150
                       *        **** ****  **** ********* ** ** ****  ********** **

consensus_12294#0      CAAGGACGAGGGCTCATTGCGTTCGACCTGCGACACCGGCCTCTACACCACCGTCGTCAT 240
consensus_12294#2      CAAGGACGAGGGCTCATTGCNTTCNACCTGCNACACCGGCCTCTACACCACCGTNGTNAT 232
consensus_12294#1      CAAGACGGAGGGCTCACTGAAGGAGGCCTGCGACACCGGCCTCTACACCACCGTCATCAT 210
                       ****   ********* **       ***** **********************  * **

consensus_12294#0      CTCCTTCCTCACCGTCTTCGGCCACGGCCGCT-ACCGGACCGACCTCGCCGGCCACCCGC 299
consensus_12294#2      CTCCTTCCTCACCGTCTTCGGCCACGGCCGCTTACCGGACCGACCTCGACGGCCACCCGC 292
consensus_12294#1      CTCCTTCTTCAGCGTCTTCGGCCACGGCCGCT-ACTGGACCGACCTCTCCGGCCACGATG 269
                       ******* *** ******************** ** ***********  *******    

consensus_12294#0      TCGCCGGCGTCGGCGCCGACGTCAAGCACT-GCCAAAAGGCCAAGAACGTCACCGTCCTC 358
consensus_12294#2      TCGCNGGCGTCGGCGNCGACGTCAAGCACTTGCCAAAAGG-------------------- 332
consensus_12294#1      TCTCCCGAGTCGGCGCCGACGTCAAGCACT-GCCA---GTCCAAGAACATCCCCGTCCTC 325
                       ** *  * ******* ************** ****   *                     

consensus_12294#0      CTCTCCATCGGCGGCGCCGGCGACCAGTACTCGCTGCCCACCGCCAAGTCGGCGCAGGAC 418
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      CTCTCCGTCGGCGGCGACGGCTACCAGTACTCGCTCCCCACCGCCAATTCGGCCAAGGAC 385
                                                                                   

consensus_12294#0      GTGGCCGAACACCTGTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTCCCGCCCG 478
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      GTCGCGGACCACCTCTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTTCCGCCCC 445
                                                                                   

consensus_12294#0      TTCGGCGACGCCGTGCTCGACGGCGTCGACGTCTACGTCGACCGCGGCCGGTGGGGCCAC 538
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      TTCGGCGACGCCGTGCTCGACGGCGTCGACCTCTACATCGACCACGGCGGGCCGGCGAAC 505
                                                                                   

consensus_12294#0      TACGACGAGCTCGCCAGGCGCCTGAGGAGCTTCGGTCGCGAGAAGCCGGCAGTGCGCCTG 598
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      TACGACGTGCTGGTCCGGCGCCTCGCCGGCTAC---CGCGGCAAGCCGGTGCTGCTGACG 562
                                                                                   

consensus_12294#0      ACGGCGTCGCCG-GCGTGCTCGCTGGCGCTGTTCGACGACGAGGTGGAGACGATGAAGAC 657
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      GCGACGCCGAGGTGCGTGTACCCGGACGCGAACGCGGGCGGCGCTGGGGACGGGGCTGGT 622
                                                                                   

consensus_12294#0      GCTGTCGCTGTTCGAGCGGCTGCACGTGCGGTTCTACA-ACGAGAGCTCGTGCGACTACA 716
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      GCGGCGCATCCACCCGCGGTTCTACG-GCGACGCGGCGTGCACGAACAAGACCGACGGCG 681
                                                                                   

consensus_12294#0      ACTACTTCGAGACGCGGCCGTTCTGGGGCGCGTGGAGGACGTGGACGTCGAGGTTCCCGG 776
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      AGGGGCGGAGGAGCCTGTTCGACTGGGAGGACTGGGACGCGTGGACGTCGCGGTTCCCGG 741
                                                                                   

consensus_12294#0      CGGCGCGGGTGCAGGTGGGGTGGCCGGCGATGGAGGAGATGAGCGGGTTCGTGGACCCGC 836
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      CGAGCCAGGTGTACGTGGGGCTTCCGGCGGAGGAGACGGCGGCGGACTGGATAAACCCGG 801
                                                                                   

consensus_12294#0      AGACGCTGCGGGAGAGCGTGCTATCGTCGGTGCAGGACGATGCCAACTACGGCGGCGTCA 896
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      AGTCGCTCTACTACGCCGTGATGCAGAGGGCGCAGACAGCGAGCAACTACGGCGGCGCCA 861
                                                                                   

consensus_12294#0      TGCTCTGGGATCGCTACTACGACAAGATCACCGGATTCGGCCGTGCCATCAAAGACATTG 956
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      TGCTGTGGGACCGAGGCGCCGACAAAGCCTACGATAACTACTACGGCAGGGCGCTCAAGG 921
                                                                                   

consensus_12294#0      TCTAATTGCAATGTTACTCCAGTGTTTATACTACATGGTTCACTGTGTTGTTTACCAACC 1016
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      ACTTCGTTTGATCGATTCTCACATTCAATCCGGCCGCCATTGCTGCTTCATCGG--AGCT 979
                                                                                   

consensus_12294#0      TGCATTGCGTCATCTGTTACTATCTGTACCCGTCTACTGGCATATGCATGTTCGTATGGG 1076
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      TCAATTCGATCAACTTCTTCTTCCCAATAGTATATGCATGATTGTGTATAATA--ATGGA 1037
                                                                                   

consensus_12294#0      TCAGGCTTGAAAGTAGTATGATTATGTTAATTTAGTTTTGAAATATAAAAGAATCCAGCA 1136
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      GCCAGCTTTGAATTTGTTTGCGTAGCGTGTGTACGTGTGCGCGTATGTAATTTGTGAGTG 1097
                                                                                   

consensus_12294#0      TGTTTCACTGTGCTGTTTACCATAGTTGCATTGCATTA---------------------- 1174
consensus_12294#2      ------------------------------------------------------------
consensus_12294#1      TCTCTCAGGGTGCTGTATGCTTGAATTAAGGTACATGAACAATAAATTCAAGTAAAAAAA 1157