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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12305#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2749 fasta sequence
[TGTGGCCGCCGAATCGACACCAAACCCCCCAAACATCTCGCAACACATCGAATTATCGAACCNTCCAATCCTACCCCGACCACGAGCGAATCCTCCTCATCGAAGTGGAGGAGAAGGAGATCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGGCCGGC-GAACCCTAGGCCGATGAGGCCGA-TCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCCCGAGATCTTCACCGGCGCCGCCGCCGCCACCGTCGTCGTCCGCCGCGCCGTCGTCATC-GGCAACG-GCTCCCCCGGCGCCGAGAACCAGTGCCTCGGCCTCGTCCGCGCCCTCGGCCTCGCCGACCACCTGACCCTCTACCGTGTGACGAGGCCGCAGGGAGGGATCAACGAGTGGCTGCACTTCCTCCCCGTCTCGCTCCACAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCCGCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGTAGATCTCCCTATCTTTCTCACGTTGCACATTCCATTGTTTCTGTATTTGGATACGTAGTCCTGCTTTGAGTTTGCAAGAATAAATCTAGCCACAATTCAAATGGTTGCACTCTGATGATTTCTCATGGAGAAACCTATGCGCACCTGAGTGCACACACAAAAAATAAGAAATGATATGTCGATGTGTTACTGTTAGATGTGGCTAGTCAGTTGCATAGAAGATACACCTGTTATTTCTTTCAGTAACAGGAGATTCATCATTTTTAGGATATCTCAATTGATTTCTTTACTCAATATGATGATCTCTAAGGGGATATCATCTCTTATTTATCGTAGCAAGGAAAAGTTCCTTGCAACGCCATTGTCCCTGGAACATTATGAAATTGTTTTAACTAATGTGATGCATCATAAAGATACCATAGAAGCTAGAATCATCAAGAGTAAAAGGCCGACCTTTTTTATGTCCTGAAGTTGCATTCTTTGCCCCTCCCCCTAGATCTTTGGGGGTGCAGAACTAGTGATGTGCCATTACTCCATGCTACCTGTGGACTGTGGATTGAGAACCCCACATTTGATGTTGTTGTTTAGATATCTGTATTAGCCTTCAGCTTTCCTCCTAAAACCCATGAGAGCCTATGATACAAATCAACTCAGGGTCAGAATTTCGTATATAGTATGTGAGGACTATAAACATATAGCGAATCTTATAATGAGCAAAGCATTTCGATGCTATGATCTTTTATATCCTTCTCTGTACACCTTTCAGAAGTATTATCGACTAGTCAACTGCCTTGGGACTCTTGGATATGCTTTTGCATGTCTAACTTACAGAGAGCTAACAGAATTTCTGTTGGCTTTTAATCCTTTTTATCTTAAGCTTATTTTGTTACAGTTTTGTATGTGTCCCATTATTGATTTTCATGCCCAGATCCAATATTGACTTTTGTTATTTGTCAATGATTAGGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTC---TTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTTATTCTGTGTGATACATGAGAAGCAATCTGACATTG]
[+] EMBL AU030689 [TGTGGCCGCCGAATCGACACCAAACCCCCCAAACATCTCGCAACACATCGAATTATCGAACCNTCCAATCCTACCCCGACCACGAGCGAATCCNCCTCATCGAAGTGGAGGAGAAGGAGATCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGG NGNCNGAACCCTAGGCCGATGAGG CGANTCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCCCGAGATCTTCACCGGCGCCG CGCNGCCACCGTCGTCGTCCGCNGCGCCGTCGTCATCGGGCAACGNGTTCCCCCGGCGCCGAGAACNAGTGCCTC ]
[+] EMBL AK073473 [ tTCCAATCCTACCCCGACCACGAGCGAATCCTCCTCATCGAAGTGGAGGAGAAGGAGATCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGGCCGGC GAACCCTAGGCCGATGAGGCCGA TCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCCCGAGATCTTCACCGGCGCCGCCGCCGCCACCGTCGTCGTCCGCCGCGCCGTCGTCATC GGCAACG GCTCCCCCGGCGCCGAGAACCAGTGCCTCGGCCTCGTCCGCGCCCTCGGCCTCGCCGACCACCTGACCCTCTACCGTGTGACGAGGCCGCAGGGAGGGATCAACGAGTGGCTGCACTTCCTCCCCGTCTCGCTCCACAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCCGCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGTAGATCTCCCTATCTTTCTCACGTTGCACATTCCATTGTTTCTGTATTTGGATACGTAGTCCTGCTTTGAGTTTGCAAGAATAAATCTAGCCACAATTCAAATGGTTGCACTCTGATGATTTCTCATGGAGAAACCTATGCGCACCTGAGTGCACACACAAAAAATAAGAAATGATATGTCGATGTGTTACTGTTAGATGTGGCTAGTCAGTTGCATAGAAGATACACCTGTTATTTCTTTCAGTAACAGGAGATTCATCATTTTTAGGATATCTCAATTGATTTCTTTACTCAATATGATGATCTCTAAGGGGATATCATCTCTTATTTATCGTAGCAAGGAAAAGTTCCTTGCAACGCCATTGTCCCTGGAACATTATGAAATTGTTTTAACTAATGTGATGCATCATAAAGATACCATAGAAGCTAGAATCATCAAGAGTAAAAGGCCGACCTTTTTTATGTCCTGAAGTTGCATTCTTTGCCCCTCCCCCTAGATCTTTGGGGGTGCAGAACTAGTGATGTGCCATTACTCCATGCTACCTGTGGACTGTGGATTGAGAACCCCACATTTGATGTTGTTGTTTAGATATCTGTATTAGCCTTCAGCTTTCCTCCTAAAACCCATGAGAGCCTATGATACAAATCAACTCAGGGTCAGAATTTCGTATATAGTATGTGAGGACTATAAACATATAGCGAATCTTATAATGAGCAAAGCATTTCGATGCTATGATCTTTTATATCCTTCTCTGTACACCTTTCAGAAGTATTATCGACTAGTCAACTGCCTTGGGACTCTTGGATATGCTTTTGCATGTCTAACTTACAGAGAGCTAACAGAATTTCTGTTGGCTTTTAATCCTTTTTATCTTAAGCTTATTTTGTTACAGTTTTGTATGTGTCCCATTATTGATTTTCATGCCCAGATCCAATATTGACTTTTGTTATTTGTCAATGATTAGGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTC TTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTTATTCTGTGTGATACATGAGAAGCAATC ]
[+] EMBL CB673307 [ GCGAATCCTCCTCATCGAAGTGGAGGAGAAGGAGATCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGGCCGGC GAACCCTAGGCCGATGAGGCCGA TCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCCCGAGATCTTCACCGGCGCCGCCGCCGCCACCGTCGTCGTCCGCCGCGCCGTCGTCATC GGCAACG GCTCCCCCGGCGCCGAGAACCAGTGCCTCGGCCTCGTCCGCGCCCTCGGCCTCGCCGACCACCTGACCCTCTACCGTGTGACGAGGCCGCAGGGAGGGATCAACGAGTGGCTGCACTTCCTCCCCGTCTCGCTCCACAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATCCCACGCCTGTTCCGTAGATGGATAACTCCGCA ]
[+] EMBL CF323382 [ AATCATCAAGAGTAAAAGGCCGACCTTTTTTATGTCCTGAAGTT ]
[-] EMBL CB656278 [ TATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTC TTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTAGGTCTGTGTGATACATGAGAAGCAATCTGACATTG]
[+] EMBL BI809713 [ AAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCGATT CAGAACGAGGGTGGTCTGTGGGATGATAGTGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCC ATTTTGGAGCCATTGCACAGCACCCAGGAGATCCTTTTTGGTTTGAGATTCTCTTCCCTCCTTTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTTAaaaaaaaaa ]
[+] EMBL BQ909103 [ ccgAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCGATTGCAGAACGAGGGTGGTCTGTGGGATGATAGTGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACCAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCCTTTTTGGTTTGAGATTCTCTTCCCTCCTTTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTTATTCTGTGTGATACATGAGAAaaaaaaaa ]
consensusID : consensus_12305#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1342 fasta sequence
[CTCGCCCCTTAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCCGCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCAT-CCTAAGATCTATA-TTTGGGATGGGGAAGAACCTAACCCGCACAT-GGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTCTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGANACTTTATTCTGTGTGAAAAAAAAAAAAAAAA]
[+] EMBL CB656277 [CTCGCCCCTTAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCCGCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCAT CCTAAGATCTATA TTTGGGATGGGGAAGAACCTAACCCGCACAT GGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAAC ]
[-] EMBL CB673308 [ AGGACCCACAAGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCAT CCTAAGATCTATA TTTGGGATGGGGAAGAACCTAACCCGCACAT GGGGCATCTTGCATGGGCTGATGCTTTTGTCGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTCTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAAT ]
[+] EMBL AU030690 [ GAAAGGTCTCTGNTATTATATCNAAAGCGTTCGCTGGTCATCCCTAAGATCTATATTTTGGNNTGGGGAAGAACCTAACCCGCACATGGGGGCNTCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAANTATGTTAAGTGAGGCTTGTNGCACAGGGAAGCCTGTTTACGTCATTGGGNCTGNGTNTTGTAAATGGANGTTTTCTGCTTTTCACAAGNCTCTACGGGAGCGAGGNGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGANGTAGCTACACGTGTCCGTGAAGCNATTGCNGAACGNGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCNGGNGATCATTTTTGGTTTGAGATTCTCTTCCCTCTTGTNCTTCTAACGCTNCTGGNGAGAAGCCAACATATGANGTATTGGNATTGANACTTTATTCTGTGTGAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12305#0 TGTGGCCGCCGAATCGACACCAAACCCCCCAAACATCTCGCAACACATCGAATTATCGAA 60
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 CCNTCCAATCCTACCCCGACCACGAGCGAATCCTCCTCATCGAAGTGGAGGAGAAGGAGA 120
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 TCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGGCCGGCGAACCC 180
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 TAGGCCGATGAGGCCGATCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCC 240
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 CGAGATCTTCACCGGCGCCGCCGCCGCCACCGTCGTCGTCCGCCGCGCCGTCGTCATCGG 300
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 CAACGGCTCCCCCGGCGCCGAGAACCAGTGCCTCGGCCTCGTCCGCGCCCTCGGCCTCGC 360
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 CGACCACCTGACCCTCTACCGTGTGACGAGGCCGCAGGGAGGGATCAACGAGTGGCTGCA 420
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 CTTCCTCCCCGTCTCGCTCCACAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAA 480
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 CACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATC 540
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 GGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGC 600
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 TCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCAT 660
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 ATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACA 720
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 GCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTA 780
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 TGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCC 840
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 GCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTC 900
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 TGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCC 960
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 ATTGCTAATCGTCAACATTGGAGGACCCACAAGTAGATCTCCCTATCTTTCTCACGTTGC 1020
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 ACATTCCATTGTTTCTGTATTTGGATACGTAGTCCTGCTTTGAGTTTGCAAGAATAAATC 1080
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 TAGCCACAATTCAAATGGTTGCACTCTGATGATTTCTCATGGAGAAACCTATGCGCACCT 1140
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 GAGTGCACACACAAAAAATAAGAAATGATATGTCGATGTGTTACTGTTAGATGTGGCTAG 1200
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 TCAGTTGCATAGAAGATACACCTGTTATTTCTTTCAGTAACAGGAGATTCATCATTTTTA 1260
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 GGATATCTCAATTGATTTCTTTACTCAATATGATGATCTCTAAGGGGATATCATCTCTTA 1320
consensus_12305#1 ------------------------------------------------------------
consensus_12305#0 TTTATCGTAGCAAGGAAAAGTTCCTTGCAACGCCATTGTCCCTGGAAC--ATTATGAAAT 1378
consensus_12305#1 ----------------------------------CTCGCCCCTTAAGCTAATCGACCAAG 26
* * **** * * ** **
consensus_12305#0 TGTTTTAACTAATGTGATGCATCATAAAGATACCATAGAAGCTAGAATCATCAAGAGTAA 1438
consensus_12305#1 TGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGG-CGGAAGCAC 85
** * * * * *** ** * * * * * * * ** * ** *
consensus_12305#0 AAGGCCGACCTTTTTTATGTCCTGAAGTTGCATTCTTTGCCCCTCCCCCTAGATCTTTGG 1498
consensus_12305#1 TACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAA----GC 141
* ** ** * * * * ** ** *** ** *
consensus_12305#0 GGGTGCAGAACTAGTGATGTGCCATTACTCCATGCTACCTGTGGACTGTGGATTGAGAAC 1558
consensus_12305#1 GGACGCCAAGAAGATCGTG-GCTGTGGCTC-GCGATAC------ATTCGAGAAGGAAGGG 193
** ** * * ** ** * *** * *** * * ** **
consensus_12305#0 CCCACATTTGATGTTGTTGTTTAGATATCTGTATTAGCCTTCAGCTTTCCTCCTAAAACC 1618
consensus_12305#1 CCAACTTTAATTGTCGC-GTGTGG----CTGGGATACCATA------TCATATTCAAGCT 242
** ** ** *** * ** * * *** ** * * ** * * ** *
consensus_12305#0 CATGAGAGCCTATGATACAAATCAACTCAGGGTCAGAATTTCGTATATAGTATGTGAGGA 1678
consensus_12305#1 CAATAAGGCATCTAGCTTCAGGCAAT---GTGTTCGTCATTCAGATACAGCACCCGAGGT 299
** * ** * * * *** * ** * *** *** ** * ****
consensus_12305#0 CT-ATAAACATATAGCGAATCTTATAATGAGCAAAGCATTTCGATGCTATGATCTTTTAT 1737
consensus_12305#1 CTCGCCTAGATAGGTTTGATCTGGTGGTGA---------CTCCTCGCCATGAT-TACTAT 349
** * *** **** * *** ** ** ***** * ***
consensus_12305#0 ATCCTTCTCTGTACACCTTTCAGAAGTATTATCGACTAGTCAACTGCCTTGGGACTCTTG 1797
consensus_12305#1 G-CTTTAATTGCTGGCGGACAAGAAGAAATTCCA------CGCCTGTTCCGTAGAT---G 399
* ** ** * ***** * * * * *** * * *
consensus_12305#0 GATATGCTTTTGCATGTCTAACTTACAGAGAGCTAACAGAATTTCTGTTGGCTT-TTAAT 1856
consensus_12305#1 GATA--ACTCCGCAAGAACCACCTG-GGAGGAATGTGGTGCTTACTGTTGGTGCACTACA 456
**** * *** * ** * *** * ** ******* **
consensus_12305#0 CCTTTTTATCTTAAGCTTATTTTGTTACAGTTTTGTATGTGTCCCATTATTGATTT---T 1913
consensus_12305#1 CCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATA-GCCTGGCATGATGAACTCGCCC 515
** * * * * * * * ** * * *** ** * *
consensus_12305#0 CATGCCCAGATCCAATATTGACTTTTGTTATTTGTCAATGATTAGGGAATTGTAAGTATG 1973
consensus_12305#1 CTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGGAATTGTAAGTATG 575
* * ** * *** * * * * *** * * * ***************
consensus_12305#0 GTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGA 2033
consensus_12305#1 GTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGA 635
************************************************************
consensus_12305#0 GTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAG 2093
consensus_12305#1 GTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAG 695
************************************************************
consensus_12305#0 AGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGG 2153
consensus_12305#1 AGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGG 755
************************************************************
consensus_12305#0 GGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTG 2213
consensus_12305#1 GGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTG 815
************************************************************
consensus_12305#0 AGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGT 2273
consensus_12305#1 AGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGT 875
************************************************************
consensus_12305#0 TTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGG 2333
consensus_12305#1 TTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGG 935
************************************************************
consensus_12305#0 AAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACAC 2393
consensus_12305#1 AAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACAC 995
************************************************************
consensus_12305#0 GTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGAT 2453
consensus_12305#1 GTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGAT 1055
************************************************************
consensus_12305#0 GTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAG 2513
consensus_12305#1 GTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAG 1115
************************************************************
consensus_12305#0 TTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCT 2573
consensus_12305#1 TTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCT 1175
************************************************************
consensus_12305#0 TTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTT 2633
consensus_12305#1 TTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTT 1235
************************************************************
consensus_12305#0 TGGTTTGAGATTCTCTTCCCTCTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATG 2693
consensus_12305#1 TGGTTTGAGATTCTCTTCCCTCTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATG 1295
************************************************************
consensus_12305#0 AAGTATTGGAATTGAAACTTTATTCTGTGTGATACATGAGAAGCAATCTGACATTG 2749
consensus_12305#1 AAGTATTGGAATTGANACTTTATTCTGTGTGAAAAAAAAAAAAAAAA--------- 1342
*************** **************** * * * ** **
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||