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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12315#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2237 fasta sequence
[AGCCCGGCTCCGCACTGTCGGCGTGCGCGCCGCGTGCCGCCTCCCGTCCTCTCCGGAAAACTCCGGCGCGGCTTTCTTTCTTCCTCCGCCTTCTTCAAGGCTCCAGTCCAGCTGCTCGCTCCCACCACCCTTCGCCTCCCCAAGCTTCGTCTTCGCCCGCACTCCCTCCCAGCAACCGCCGCCCCGGAGAGTCCCGGATTTCGTGGCCATCTCCGTCGCACGATCGAGTGGCGAGGATGACTGAACAATTATACACTGTGGCATCTGACAGTGAAACCACTGGGGAAGATAAGTCGCAGATGTCGTTTCCTGATGTTGCTATTGGAATCGACATTGGGACCTCAAATTGTAGTGTTGCCGTTTGGACTGGCCATCAGGTTGAACTCCTCAAAAACACTCGCAACCAGAAAGGGATGAGGTCATATGTGATGTTCAAAGATGACAGCCTTTCAGCAGGAGTTACAGGAGGAGCAACCCGGGAACATGGACATGA-GGAAAGAGATA-TTTTGTCAGGAAGTGCCATATTTAACATGAAACGTTTGATT-GGGAGAATGGACACAGATGAAGTGGTTCAAGCTAGCAAGAGCCTTCCTTTTCTTGTGCAGACATTGGGTATTGGGGTGAGACCATTCATTGCAGCACTGGTGAACAATATGTGGCGGTCTACCACTCCTGAA-GAAGTTCTTGCCATCTTTCTCCTTGAATTGAAGGCCTTGGTAGAGATGCATCTCAAACATCCGGTGAGGAATGCTGTTCTTACCATTCCAGTTGCATTCAGTCGGTTTCAACAGACCAGGATTGAGAGAGCATGTGCGATGGCTGGGCTGCATGTGTTACGGCTCATGCCAGAGCCGACCGCTATCGCACTTTTGTATGCCCAACAGCAGCAGCAATTGCTACATGACAATATGGGAAGTGGCATTGAGAAAATTGCTCTGATATTTAACATGGGTGCTGGCTACTGTGATGCTGCTGTGGCTGCCACTGCTGGAGGTGTTTCTCAGATAAGAGCACTTTCAGGAAGCACTGTTGGTGGAGAGGATATCCTTCAGAATGTCATGCGCCATCTCATGCCTGATTTTGATAGTCTATATGCTGGTCAAACAATGGACAGAATCAAGTCAATTGGCTTACTCCGGATGGCAACTCAGGATGCAATTCACAAACTGGCTACGCAGGAGCATGTGGAGATCAATGTAGATTTGGGGGCTGGCCACAAAGTGTCAAAGATCTTGGACCGTGGAGAATTTGAAAAGGTGAATCAGTCTATTTTTGAGAAATGTGAAGGGATCATCAAGCAATGCCTGGCTGATGCAAAGTTAACACCAGAGGACATCAATGATGTGATATTGGTTGGAGGATGTTCCAGAATTCCTAAAATCAGAAGCGTTGTCCTTGGCTTATGCAAGAAGGACGACTCTTACAGTGGTATAGACCCACTTGAAGCTGCAGTTTCAGGGGCTGCTTTGGAAGGAGCCATTGCCTCAGGAGTATCTGACCCTTCAGGGAGCCTGGATCTGTT-GA-CAA-TTCAGGCAACTCCAATGAACCTT-GGAATT-CGTGCTGA-CGGCGGTAACTT-CGCCGCAATCATTCCAAGG-AA-CACTGCT-GTTCCTG-CGAG-AAGGGACATGCTCTTTACCACAACCCACGACAAT-CAGACCGAAGCTCTCATTG-CCGTCTATGAAGGCGAAGGGAATCAGGCTGAAGACAACCATCTATTGGGATACTTCAAGATCACCGGTATTCCAGCAGCAGCAAAGGGCACCGTCGAAATCAATGTCTGCATGGACATCGACGCTGGCAATGTCCTCAGGGTATTCGCCGGCGTCGTCAAGCCTCAGGGCCAGGCTGTTCCACCGTTCATTGAGGTGAGGATGCCAACGCTAGACGATGGCCATGGCTGGTGCGG-ACAGGCTCTCGCCAAGATGTATGGCAGTACGCTTGACCTGGCTACTATCCCGAAGAAGCTGCATCCTTGAGAAATTGCATATCGTCGCATGTAGTTGTATGACTCCATTATCTAAAAAAAATGTAGTTGTATGACTCGTATCATCCGGTGCCGTAGTTCGTGCATATGTGGTTCGACCGTGTCATGATGGTTACTTGGTTCAGTAGCTTGTTTGCCGGACTTTTTACATGTAAACATAAAGAGTGCCAATGTCATCTCTGTACAAAAAATGTGTGTCGCGTGTATAGAATAAATCAATGTTACCGGCTGTT---AAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK102685 [AGCCCGGCTCCGCACTGTCGGCGTGCGCGCCGCGTGCCGCCTCCCGTCCTCTCCGGAAAACTCCGGCGCGGCTTTCTTTCTTCCTCCGCCTTCTTCAAGGCTCCAGTCCAGCTGCTCGCTCCCACCACCCTTCGCCTCCCCAAGCTTCGTCTTCGCCCGCACTCCCTCCCAGCAACCGCCGCCCCGGAGAGTCCCGGATTTCGTGGCCATCTCCGTCGCACGATCGAGTGGCGAGGATGACTGAACAATTATACACTGTGGCATCTGACAGTGAAACCACTGGGGAAGATAAGTCGCAGATGTCGTTTCCTGATGTTGCTATTGGAATCGACATTGGGACCTCAAATTGTAGTGTTGCCGTTTGGACTGGCCATCAGGTTGAACTCCTCAAAAACACTCGCAACCAGAAAGGGATGAGGTCATATGTGATGTTCAAAGATGACAGCCTTTCAGCAGGAGTTACAGGAGGAGCAACCCGGGAACATGGACATGA GGAAAGAGATA TTTTGTCAGGAAGTGCCATATTTAACATGAAACGTTTGATT GGGAGAATGGACACAGATGAAGTGGTTCAAGCTAGCAAGAGCCTTCCTTTTCTTGTGCAGACATTGGGTATTGGGGTGAGACCATTCATTGCAGCACTGGTGAACAATATGTGGCGGTCTACCACTCCTGAA GAAGTTCTTGCCATCTTTCTCCTTGAATTGAAGGCCTTGGTAGAGATGCATCTCAAACATCCGGTGAGGAATGCTGTTCTTACCATTCCAGTTGCATTCAGTCGGTTTCAACAGACCAGGATTGAGAGAGCATGTGCGATGGCTGGGCTGCATGTGTTACGGCTCATGCCAGAGCCGACCGCTATCGCACTTTTGTATGCCCAACAGCAGCAGCAATTGCTACATGACAATATGGGAAGTGGCATTGAGAAAATTGCTCTGATATTTAACATGGGTGCTGGCTACTGTGATGCTGCTGTGGCTGCCACTGCTGGAGGTGTTTCTCAGATAAGAGCACTTTCAGGAAGCACTGTTGGTGGAGAGGATATCCTTCAGAATGTCATGCGCCATCTCATGCCTGATTTTGATAGTCTATATGCTGGTCAAACAATGGACAGAATCAAGTCAATTGGCTTACTCCGGATGGCAACTCAGGATGCAATTCACAAACTGGCTACGCAGGAGCATGTGGAGATCAATGTAGATTTGGGGGCTGGCCACAAAGTGTCAAAGATCTTGGACCGTGGAGAATTTGAAAAGGTGAATCAGTCTATTTTTGAGAAATGTGAAGGGATCATCAAGCAATGCCTGGCTGATGCAAAGTTAACACCAGAGGACATCAATGATGTGATATTGGTTGGAGGATGTTCCAGAATTCCTAAAATCAGAAGCGTTGTCCTTGGCTTATGCAAGAAGGACGACTCTTACAGTGGTATAGACCCACTTGAAGCTGCAGTTTCAGGGGCTGCTTTGGAAGGAGCCATTGCCTCAGGAGTATCTGACCCTTCAGGGAGCCTGGATCTGTT GA CAA TTCAGGCAACTCCAATGAACCTT GGAATT CGTGCTGA CGGCGGTAACTT CGCCGCAATCATTCCAAGG AA CACTGCT GTTCCTG CGAG AAGGGACATGCTCTTTACCACAACCCACGACAAT CAGACCGAAGCTCTCATTG CCGTCTATGAAGGCGAAGGGAATCAGGCTGAAGACAACCATCTATTGGGATACTTCAAGATCACCGGTATTCCAGCAGCAGCAAAGGGCACCGTCGAAATCAATGTCTGCATGGACATCGACGCTGGCAATGTCCTCAGGGTATTCGCCGGCGTCGTCAAGCCTCAGGGCCAGGCTGTTCCACCGTTCATTGAGGTGAGGATGCCAACGCTAGACGATGGCCATGGCTGGTGCGG ACAGGCTCTCGCCAAGATGTATGGCAGTACGCTTGACCTGGCTACTATCCCGAAGAAGCTGCATCCTTGAGAAATTGCATATCGTCGCATGTAGTTGTATGACTCCATTATCTAAAAAAAATGTAGTTGTATGACTCGTATCATCCGGTGCCGTAGTTCGTGCATATGTGGTTCGACCGTGTCATGATGGTTACTTGGTTCAGTAGCTTGTTTGCCGGACTTTTTACATGTAAACATAAAGAGTGCCAATGTCATCTCTGTACAAAAAATGTGTGTCGCGTGTATAGAATAAATCAATGTTACC ]
[+] EMBL AU162159 [ GTCTTCGCCCGCACTCCCTCCCAGCAACCGCCGCCCCGGAGAGTCCCGGATTTCGTGGCCATCTCCGTCGCACGATCGAGTGGCGAGGATGACTGAACAATTATACACTGTGGCATCTGACAGTGAAACCACTGGGGAAGATAAGTCGCAGATGTCGTTTCCTGATGTTGCTATTGGAATCGACATTGGGACCTCAAATTGTAGTGTTGCCGTTTGGACTGGCCATCAGGTTGATCTCCTCAAAAACACTCGCAACCAGAAAGGGATGAGGTCATATGTGATGTTCAAAGATGACAGCCTTTCAGCAGGAGTTACAGGAGGAGCAACCCGGGAACATGGACATGAGGGAAAGAGATA TTTTGTCAGGAAGTGCCATATTTAACATGAAACGTTTGATTGGGGGGAATGGACACAGATGAAGTGGNTCAAGCTAGCA ]
[+] EMBL AU161278 [ GTCTTCGCCCGCACTCCCTCCCAGCAACCGCCGCCCCGGAGAGTCCCGGATTTNGTGGCCATCTCCGTCGCACGATCGAGTGGCGAGGATGACTGAACAATTATACACTGTGGCATCTGACAGTGAAACCACTGGGGAAGATAAGTCGCAGATGTCGTTTCCTGATGTTGCTATTGGAATCGACATTGGGACCTCAAATTGTAGTGTTGCCGTTTGGACTGGCCATCAGGTTGAACTCCTCAAAAACACTCGCAACCAGAAAGGGATGAGGTCATATGTGATGTTCAAAGATGACAGCCTTTCAGCAGGAGTTACAGGAGGAGCAACCCGGGAACATGGACATGA GGAAAGAGATATTTTTGTCAGGAAGTGCCATATTTAACATGNAACGNTTGATT GGGAGAATGGGCACAGATGn ]
[+] EMBL C28639 [ ACCTCAAATTGTAGTGTTGCCGTTTGGACTGGCCATCAGGTTGAACTCCTCAAAAACACTCGCAACCAGAAAGGGATGAGGTCATATGTGATGTTCAAAGATGACAGCCTTTCAGCAGGAGTTACAGGAGGAGCAACCCGGGAACATGGACATGA GGAAAGAGATA TTTTGTCAGGAAGTGCCATATTTAACATGAAACGTTTGATT GGGAGAATGGACACAGATGAAGTGGTTCAAGCTAGCAAGAGCCTTCCTTTTCTTGTGCAGACATTGGGTATTGGGGTGAGACCATTCATTGCAGCACTGGTGAACAATATGTGGCGGTCTACCACTNCTGAAGGAAGTTCTTGCCATCTTTCTCCTTGAATTGAAGGCCTTGGTAGAGATGCATCTCAAACATCCGGTGAGGGATGCTGTTCTTACCATTCCAGTTG ]
[+] EMBL AU100975 [ AAGGGATGAGGTCATATGTGATGTTCAAAGATGACAGCCTTTCAGCAGGAGTTACAGGAGGAGCAACCCGGGAACATGGACATGA GGAAAGAGATA TTTTGTCAGGAAGTGCCATATTTAACATGAAACGTTTGATT GGGAGAATGGACACAGATGAAGTGGTTCAAGCTAGCAAGAGCCTTCCTTTTCTTGTGCAGACATTGGGTATTGGGGTNAGACCATTCATTGCAGCACTGGTGAACAATATGTGGCGGTCTACCACTCCTGAA GAAGTTCTTGCCATCTTTCTCCTTGAATTGAAGGCCTTGGTAGAGATGCATCTCAAACATCCGGTGAGGAATGCTGTTCTTACCATTCCAGTTGCATTCAGTCGGTTTCAACAGACCAGGATTGAGAGAGCATGTGCGATGGCTGGGCTGCATGTGTTACGGCTCATGCCAGAGCCGACCGCTATCGCACTTTTGTATGCCCAACAGCAGCAGCAATTGCTACATGACAATATGGGAAGTGGCATTGAGAAAAaa ]
[+] EMBL C97386 [ ntngaTGATGCTGCTGTGGCTGCCACTGCTGGAGGTGTTTCTCAGATAAGAGCACTTTCAGGAAGCACTGTTGGTGGAGAGGATATCCTTCAGAATGTCATGCGCCATCTCATGCCTGATTTTGATAGTCTATATGCTGGTCAAACAATGGACAGAATCAAGTCAATTGGCTTACTCCGGATGGCAACTCAGGATGCAATTCACAAACTGGCTACGCAGGAGCATGTGGAGATCAATGTAGATTTGGGGGCTGGCCACAAAGTGTCAAAGATCTTGGACCGTGGAGAATTTGAAAAGGTGAATCAGTCTATTTTTGAGAAATGTGAAGGGATCATCAAGCAATGCCTGGCTGATGCAAAGTTAACACCAGAGGACATCAATGATGTGATATTGGTTGGAGGATGTTCCAGAATTCCTAAAATCAGAAGCGTTGTCCTTGGCTTATGCAAGAAGGACGACTCTTACAGTGGTATAGACCCACTTGAAGCTGCAGTTTCAGGGGCTGCTTTGGAAGGAGCCATTGCCTCAGGAGTATCTGACCCTTC ]
[+] EMBL C97387 [ GATCTGTTGGACCAATTTCAGGCAACTCCCATGAACCTTGGGAATTNCGTGCTGACCGCCGGTAACTTNCGCCGCAATCATTCCCAGGNAACCACTGCTGGTTCCTGCCGAGAAAGGGAC TGCTCTTTACCACAACCCACGACAATCCAGACCGAAGCTCTC TTGCCCGTCTATGAAGGCGAAGGGAATCAGGCTGAAGACAACC TCTATTGGGATACTTCAAGATCACCGGTATTCCAGCAGCAGCAAAGGGCACCGTCGAAATCAATGTCTGCATGGACATCGACGCTGGCAATGTCCTCAGGGTATTCGCCGGCGTCGTCAAGCCTCAGGGCCAGGCTGTTCCACCGTTCATTGAGGTGAGGATGCCAACGCTAGACGATGGCCATGGCTGGTGCGGAACAGGCTCTCGCCAAGATGTATGGCAGTACGCTTGACCTGGCTA TATCCCGAAGAAGCTGCATCCTTGAGAAATTGCATATCGTCGCATGTAGTTGTATGACTCCATTATCTAAAAAAAATGTAGTTGTATGACTCGTATCATCCGGTGCCGTAGTTCGTGCATATGTGGTTCGACCGTGTCATGATGGTTACTTGGTTCAGTAGCTTGTTTGCCGGACTTTTTACATGTAAACATAAAGAGTGCCAATGTCATCTCTGTACAAAAAATGTGTGTCGCGTGTATAGAATAAATCAATGTTACCGGCTGTTCGGAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU161277 [ ATGANCCTT GGAATT CGTGCTGA CGGCGGTAA TT CGCCGCAATCATTCCAAGG AA CACTGCT GTTCCTG CGAG AAGGGACATGCTCTTTACCACAACCCACGACAAT CAGACCGAAGCTCTCATTG CCGTCTATGAAGGCGAAGGGAATCAGGCTGAAGACAACCATCTATTGGGATACTTCAAGATCACCGGTATTCCAGCAGCAGCAAAGGGCACCGTCGAAATCAATGTCTGCATGGACATCGACGCTGGCAATGTCCTCAGGGTATTCGCCGGCGTCGTCAAGCCTCAGGGCCAGGCTGTTCCACCGTTCATTGAGGTGAGGATGCCAACGCTAGACGATGGCCATGGCTGGTGCGG ACAGGCTCTCGCCAAGATGTATGGCAGTACGCTTGACCTGGCTACTATCCCGAAGAAGCTGCATCCTTGAGAAATTGCATATCGTCGCATGTAGTTGTATGACTCCATTATCTAAAAAAAATGTAGTTGTATNACTCGTATCATCCGGTGCCGTAGTTCGTGCATATGTGGTTCGACCGTGTCATGATGGTTACTTGGTTCAGTAGCTTGTTTGCCGGACTTTTTACATGTAAACATAAAGAGTGCCAATGTCATCTCTGTACAAAAAATGTGTGTCGCGTGTATAGAATAAATCAATGTTACCGGCTGTT AAAAAAAAAAAAAAAAA ]
[+] EMBL CA767519 [ AAGGGAATCAGGCTGAAGACAACCATCTATTGGGATACTTCAAGATCACCGGTATTCCAGCAGCAGCAAAGGGCACCGTCGAAATCAATGTCTGCATGGACATCGACGCTGGCAATGTCCTCAGGGTATTCGCCGGCGTCGTCAAGCCTCAGGGCCAGGCTGTTCCACCGTTCATTGAGGTGAGGATGCCAACGCTAGACGATGGCCATGGCTGGTGCGG ACAGGCTCTCGCCAAGATGTATGGCAGTACGCTTGACCTGGCTACTATCCCGAAGAAGCTGCATCCTTGAGAAACTGCATATCGTCGTATGTAGTTGTATGACTCCATTATCTAAAAAAAATGTAGTTGTATGACTCGTATCATCCGGTGCCGTAGTTCGTGCATATGTGGTTCGACCGTGTCATGATGGTTACTTGGTTCCGTAGCTTGTTTGCCGGACTTTTTACATGTAAACATAAAGAGTGCCAATGTCGTCTCTGTACAAAAAATGTGTGTCGCGTGTATAGAATAAATCAATGTTACC ]
[+] EMBL AU058039 [ ACGCTGGCAATGTCCTCAGGGTATTCGCCGGCGTCGTCAAGCCTCAGGGCCAGGCTGTTCCACCGTTCATTGAGGTGAGGATGCCAACGCTAGACGATGGCCATGGCTGGTGCGG ACAGGCTCTCGCCAAGATGTATGGCAGTACGCTTGACCTGGCTACTATCCCGAAGAAGCTGCATCCTTGAGAAATTGCATATCGTCGCATGTAGTTGTATGACTCCATTATCTAAAAAAAATGTAGTTGTATGACTCGTATCATCCGGTGCCGTAGTTCGTGCNTATGTGGTTCGACCGTGTCATGATGGTTACTTGGTTCAGTAGCTTGTTTGCCGGACTTTTTACATGTAAACATAAAGAGTGCCAATGTCATCTCTGTACAAAAAATGTGTGTCGCGTGTATAGAATAAATCAATGTTACCGGCTGTT AAAAAAAAAAAAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||