cluster # 12331

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Oryza sativa
cluster # 12331 cluster # 12331 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12331#0 length = 2071 sequences # 9

consensus_12331#1 length = 498 sequences # 1

consensusID : consensus_12331#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2071
fasta sequence

                              [GGTAGCCACCTCTCTTTCCGCACGCTCCCGTCCCCACCGCTCTTATCCGCTTCTCTCCCCGTGCCCTCTCCCGCTTCTTCCCCGCGCGTAGCCACGCACGCCTCACCGCGCCCCCCTTCTCCGGCTCCGCCGCGCGTTCTACTTCTACCGTTACCGCCCGCGGCAACAACAGCTAGGTAGATACACGTCGCGCGTTCGAGCCTAAGGTACCTGCTCTCTCGCGCGCGCCACCGATGGCGTGCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCTTCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCCGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTGGAACTGACGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACGATGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGAATGGAATTTTCTGATCTTATTCAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAGTTTGATGCTTCAAAGGGTTTTCGATTCTCTACATACTCTCACTGGTGGATCAAACAAGCAATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAAGCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCACCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATGAGCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATACCAGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTGATGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATCAGGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTGATGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGGGGCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAGCTAGCCATGCATGCGTGTGCTGCCTAGTTACCACTTACCACCACATTGCCATCTTCTTTTTGGAAGGGTTATTAACCTGTACGAGTAACTGTTAATCCTTACGTATGAGTATGTAACACACGTGTAAAGAAAGGAGATCCAAACATTTGTTTTGTAACAACATACTGGTATAGCTATTGCCGGAAGCAAAGAACGCAACATAGTTGCTTCAAGAG]

[+] EMBL AK060821             [GGTAGCCACCTCTCTTTCCGCACGCTCCCGTCCCCACCGCTCTTATCCGCTTCTCTCCCCGTGCCCTCTCCCGCTTCTTCCCCGCGCGTAGCCACGCACGCCTCACCGCGCCCCCCTTCTCCGGCTCCGCCGCGCGTTCTACTTCTACCGTTACCGCCCGCGGCGACAACAGCTAGGTAGATACACGTCGCGCGTTCGAGCCTAAGGTACCTGCTCTCTCGCGCGCGCCACCGATGGCGTGCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCTTCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCCGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTGGAACTGACGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACGATGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGAATGGAATTTTCTGATCTTATTCAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAGTTTGATGCTTCAAAGGGTTTTCGATTCTCTACATACTCTCACTGGTGGATCAAACAAGCAATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAAGCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCACCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATGAGCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATACCAGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTGATGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATCAGGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTGATGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGGGGCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAGCTAGCCATGCATGCGTGTGCTGCCTAGTTACCACTTACCACCACATTGCCATCTTCTTTTTGGAAGGGTTATTAACCTGTACGAGTAACTGTTAATCCTTACGTATGAGTATGTAACACACGTGTAAAGAAAGGAGATCCAAACATTTGTTTTGTAACAACATACTGGTATAGCTATTGCCGGAAGCAAAGAACGCAACATAGTT          ]
[+] EMBL AK099036             [                                                                                     GCGTAGCCACGCACGCCTCACCGCGCCCCCCTTCTCCGGCTCCGCCGCGCGTTCTACTTCTACCGTTACCGCCCGCGGCAACAACAGCTAGGTAGATACACGTCGCGCGTTCGAGCCTAAGGTACCTGCTCTCTCGCGCGCGCCACCGATGGCGTGCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCTTCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCCGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTGGAACTGACGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACGATGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGAATGGAATTTTCTGATCTTATTCAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAGTTTGATGCTTCAAAGGGTTTTCGATTCTCTACATACTCTCACTGGTGGATCAAACAAGCAATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAAGCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCACCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATGAGCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATACCAGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTGATGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATCAGGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTGATGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGGGGCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAGCTAGCCATGCATGCGTGTGCTGCCTAGTTACCACTTACCACCACATTGCCATCTTCTTTTTGGAAGGGTTATTAACCTGTACGAGTAACTGTTAATCCTTACGTATGAGTATGTAACACACGTGTAAAGAAAGGAGATCCAAACATTTGTTTTGTAACAACATACTGGTATAGCTATTGCCGGAAGCAAAGAACGCAACATAG            ]
[+] EMBL CB640942             [                                                                                                                CCCCTTCTCCGGCTCCGCCGCGCGTTCTACTTCTACCGTTACCGCCCGCGGCAACAACAGCTAGGTAGATACACGTCGCGCGTTCGAGCCTAAGGTACCTGCTCTCTCGCGCGCGCCACCGATGGCGTGCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK067693             [                                                                                                                                                                                      ACACGTCGCGCGTTCGAGCCTAAGGTACCTGCTCTCTCGCGCGCGCCACCGATGGCGTGCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCTTCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGGGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCCGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTGGAACTGACGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACGATGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGAATGGAATTTTCTGATCTTATTCAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAGTTTGATGCTTCAAAGGGTTTTCGATTCTCTACATACTCTCACTGGTGGATCAAACAAGCAATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAAGCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCACCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATGAGCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATACCAGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTGATGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATCAGGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTGATGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGGGGCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAGCTAGCCATGCATGCGTGTGCTGCCTAGTTACCACTTACCACCACATTGCCATCTTCTTTTTGGAAGGGTTATTAACCTGTACGAGTAACTGTTAATCCTTACGTATGAGTATGTAACACACGTGTAAAGAAAGGAGATCCAAACATTTGTTTTGTAACAACATACTGGTATAGCTATTGCCGGAAGCAAAGAACGCAACATAGTTG         ]
[+] EMBL AB095095             [                                                                                                                                                                                                        CCTAAGGTACCTGCTCTCTCGCGCGCGCCACCGATGGCGTGCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCTTCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCCGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTGGAACTGACGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACGATGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGAATGGAATTTTCTGATCTTATTCAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAGTTTGATGCTTCAAAGGGTTTTCGATTCTCTACATACTCTCACTGGTGGATCAAACAAGCAATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAAGCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCACCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATGAGCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATACCAGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTGATGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATCAGGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTGATGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGGGGCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAGCTAGCCATGCATGCGTGTGCTGCCTAGTTACCACTTACCACCACATTGCCATCTTCTTTTTGGAAGGGTTATTAACCTGTACGAGTAACTGTTAATCCTTACGTATGAGTATGTAACACACGTGTAAAGAAAGGAGATCCAAACATTTGTTTTGTAACAACATACTGGTATAGCTATTGCCGGAAGCAAAGAACGCAACATAGTTGCTTCAAGAG]
[+] EMBL CB633068             [                                                                                                                                                                                                                                         ATGGCCTGCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCTTCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCCGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAAGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB633069             [                                                                                                                                                                                                                                                                       CCCCTT  CAGACGCGCGGNGGAGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCCCTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCTTGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCTTCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB653610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCCGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTGGAACTGACGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACGATGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGAATGGAATTTTCTGATCTTATTCAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAGTTTGATGCTTCAAAGGGTTTTCGATTCTCTACATACTCTCACTGGTGGATCAAACAAGCAATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAAGCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCACCAACGAAGAGATCGCATCCGACACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB653611             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGCAATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAAGCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCACCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATGAGCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATACCAGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTGATGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATCAGGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTGATGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGGGGCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAGCTAGCCATGCATGCGTGTGCTGCCTAGTTACCACTTACCACCACATTGCCATCTTCTTTTTGGAAGGGTTATTAACCTGTACGAGTAACTGTTAATCCTTACGTATGAGTATGTAACACACGTGTAAAGAAAGGAGATCCAAACATTTGTTTTGTAACAACATACTGGTATAGCTATTGCCGGAAGCAAAGAACGCAACATAGTTGCTT      ]




>consensus_12331#0
GGTAGCCACCTCTCTTTCCGCACGCTCCCGTCCCCACCGCTCTTATCCGCTTCTCTCCCC
GTGCCCTCTCCCGCTTCTTCCCCGCGCGTAGCCACGCACGCCTCACCGCGCCCCCCTTCT
CCGGCTCCGCCGCGCGTTCTACTTCTACCGTTACCGCCCGCGGCAACAACAGCTAGGTAG
ATACACGTCGCGCGTTCGAGCCTAAGGTACCTGCTCTCTCGCGCGCGCCACCGATGGCGT
GCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACG
GCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCG
CGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCT
ACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACC
AAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGG
AGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCG
TCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGG
GATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCT
TCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAAT
CGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAAT
CGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGG
GTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCCGGAGGCTTCTGACAGCAA
AACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAA
AGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTG
GAACTGACGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACGA
TGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGAA
TGGAATTTTCTGATCTTATTCAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAGT
TTGATGCTTCAAAGGGTTTTCGATTCTCTACATACTCTCACTGGTGGATCAAACAAGCAA
TACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAAG
CAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCA
CCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATGA
GCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATACC
AGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTGA
TGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATCA
GGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTGA
TGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGGG
GCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAGCTAG
CCATGCATGCGTGTGCTGCCTAGTTACCACTTACCACCACATTGCCATCTTCTTTTTGGA
AGGGTTATTAACCTGTACGAGTAACTGTTAATCCTTACGTATGAGTATGTAACACACGTG
TAAAGAAAGGAGATCCAAACATTTGTTTTGTAACAACATACTGGTATAGCTATTGCCGGA
AGCAAAGAACGCAACATAGTTGCTTCAAGAG

consensusID : consensus_12331#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 498
fasta sequence

                              [GGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCTGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGCGCAGAAGCAGCTGGAACTGAGCGAGAACACTTT]

[-] EMBL BI810206             [GGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCTGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGCGCAGAAGCAGCTGGAACTGAGCGAGAACACTTT]




>consensus_12331#1
GGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCA
AACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTT
GGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGGCGTGGCTGTGAAATCG
GTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCG
TTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGT
TGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCTGGAGGCTTCTGACAGCAAAA
CAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAG
GAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGCGCAGAAGCAGCTGGA
ACTGAGCGAGAACACTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12331#0      GGTAGCCACCTCTCTTTCCGCACGCTCCCGTCCCCACCGCTCTTATCCGCTTCTCTCCCC 60
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      GTGCCCTCTCCCGCTTCTTCCCCGCGCGTAGCCACGCACGCCTCACCGCGCCCCCCTTCT 120
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      CCGGCTCCGCCGCGCGTTCTACTTCTACCGTTACCGCCCGCGGCAACAACAGCTAGGTAG 180
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      ATACACGTCGCGCGTTCGAGCCTAAGGTACCTGCTCTCTCGCGCGCGCCACCGATGGCGT 240
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      GCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACG 300
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      GCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCG 360
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      CGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCT 420
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      ACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACC 480
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      AAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGG 540
consensus_12331#1      -------------------------------GGCCGTCGCTCTAGCAAGGGCAGCGGCGG 29
                                                      *****************************

consensus_12331#0      AGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCG 600
consensus_12331#1      AGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCG 89
                       ************************************************************

consensus_12331#0      TCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGG 660
consensus_12331#1      TCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGG 149
                       ************************************************************

consensus_12331#0      GATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCT 720
consensus_12331#1      GATTGGGGGCGAGG---------------------------------------------- 163
                       **************                                              

consensus_12331#0      TCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAAT 780
consensus_12331#1      ---------------------------------------------GCGTGGCTGTGAAAT 178
                                                                    ***************

consensus_12331#0      CGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAAT 840
consensus_12331#1      CGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAAT 238
                       ************************************************************

consensus_12331#0      CGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGG 900
consensus_12331#1      CGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGG 298
                       ************************************************************

consensus_12331#0      GTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCCGGAGGCTTCTGACAGCAA 960
consensus_12331#1      GTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCTGGAGGCTTCTGACAGCAA 358
                       ***************************************** ******************

consensus_12331#0      AACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAA 1020
consensus_12331#1      AACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAA 418
                       ************************************************************

consensus_12331#0      AGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTG 1080
consensus_12331#1      AGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGCGCAGAAGCAGCTG 478
                       ********************************************** *************

consensus_12331#0      GAACTGA-CGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACG 1139
consensus_12331#1      GAACTGAGCGAGAACACTTT---------------------------------------- 498
                       ******* ************                                        

consensus_12331#0      ATGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGA 1199
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      ATGGAATTTTCTGATCTTATTCAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAG 1259
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      TTTGATGCTTCAAAGGGTTTTCGATTCTCTACATACTCTCACTGGTGGATCAAACAAGCA 1319
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      ATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAA 1379
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      GCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCC 1439
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      ACCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATG 1499
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      AGCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATAC 1559
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      CAGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTG 1619
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      ATGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATC 1679
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      AGGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTG 1739
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      ATGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGG 1799
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      GGCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAGCTA 1859
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      GCCATGCATGCGTGTGCTGCCTAGTTACCACTTACCACCACATTGCCATCTTCTTTTTGG 1919
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      AAGGGTTATTAACCTGTACGAGTAACTGTTAATCCTTACGTATGAGTATGTAACACACGT 1979
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      GTAAAGAAAGGAGATCCAAACATTTGTTTTGTAACAACATACTGGTATAGCTATTGCCGG 2039
consensus_12331#1      ------------------------------------------------------------
                                                                                   

consensus_12331#0      AAGCAAAGAACGCAACATAGTTGCTTCAAGAG 2071
consensus_12331#1      --------------------------------