cluster # 12344

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Oryza sativa
cluster # 12344 cluster # 12344 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12344#0 length = 2468 sequences # 9

consensus_12344#1 length = 402 sequences # 1

consensusID : consensus_12344#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2468
fasta sequence

                              [TCTTCGGCGCCGTCGTCGCCGGCGGCGTCGTCGGACTCCATCGACCTCAACTTCCTGCCGTTCCTCAAGAGGGAGCCCAAGTCGGAGCCGGCTTCACCGGAGCGAGGGCCTCTGCCGCTGCCGGCAGCGGCACCGCCGCCTCCACCTCCGCCGCCGCCCCCACCACCGCCACCGCAGGTGCAGGCGGCGACGGTGGCAACTCCGGTGCCGGCGACGCCCGACCTCTCGGCGGCGGCGGTGATGACGCCGCTGCAGTCGCTGCCGCCGAACCCCGAGGAGGAGACGCTCCTGGCGGAGTACTACCGGCTCGCGACGCTATACCTGTCGTCGGCGGGGGCGGCCGGCGTAATCGTGCCGGCGGCGGCGCCGGAGGCTTCCGCGGGGGCGGTGGCGCAGCCCGGGTCGGGGTCCGGCGCGAAGAAGCGGCGGCCGCGGTCGTCGGAGCTGGTGCGGGTGTCCTCGCTGAGCGTGCAGGACCAGATCTACTTCCGGGACCTGGTGCGCCGGGCGCGCATCACGTTCGAGTCTCTCCGCGGGATCCTGCTGCGGGACGACGAGCGCGCGGAGGTGCTCGGCCTCACGGGCGTCCCCGGGTTCGGCGCCGTCGACCGCCGCCGCGTCCGCGCCGACCTGCGTGCCGCGGCGCTGATGGGGGACCGAGACCTGTGGCTCAACCGCGACCGCCGAATCGTGGGGCCGATCCCGGGGATCTCGGTTGGGGACGCCTTCTTCTTCCGCATGGAGCTTTGCGTGCTAGGGCTACACGGCCAGGTGCAGGCTGGGATCGACTTTGTCACGGCTGGGCAGTCTTCCTCAGGGGAGCCCATAGCCACATCTATCATCGTGTCCGGTGGGTATGAAGACGATGACGATCGCGGCGATGTACTTGTGTACACAGGACATGGTGGTCGTGACCCCAACCTCCACAAGCATTGTGTTGATCAGAAGCTTGAGGGTGGCAACCTTGCCCTCGAGCGTAGCATGGCCTATGGTATTGAGATCCGCGTGATCCGTGCTGTCAAGTCCAAGCGCAGCCCCGTCGGCAAGGTATACTTCTATGATGGCCTCTATAAGGTTGTTGACTACTGGCTTGACCGTGGGAAGTCTGGCTTCGGTGTTTACAAGTACAAAATGCTGCGCATCGAGGGGCAGGAGTCGATGGGCTCTGTAAATTTTCGACTAGCCGAACAGCTTAAGGTCAATGCCCTGACTTTCCGGCCAACAGGGTATTTGGGCTTTGATATTTCCATGGGTCGAGAGATCATGCCGGTTGCACTGTACAATGATGTTGATGATGATCGTGACCCACTTTTATTTGAGTATCTGGCGCGGCCAATATTTCCGTCCTCTGCAGTCCAAGGGAAGTTTGCTGAGGGTGGTGGCGGGTGTGAGTGCACTGAGAATTGCTCAATTGGATGTTACTGTGCACAGAGGAATGGCGGTGAGTTTGCATATGACAAGCTCGGTGCTCTTTTACGGGGCAAACCACTGGTATATGAGTGTGGGCCATATTGCCGGTGCCCACCTAGTTGCCCCAACAGGGTTAGTCAGAAGGGGCTTAGGAATCGGCTTGAGGTATTCCGGTCAAGGGAGACTGGGTGGGGTGTTCGGTCTTTGGATCTCATTAAGGCTGGAACCTTCATCTGTGAGTTTAGTGGGATAGTGCTCACTCATCAACAGTCAGAGATTATGGCTGCGAATGGTGATTGCTTGGTGCGGCCAAGCAGGTTCCCTCCAAGGTGGTTAGATTGGGGTGATGTCTCTGATGTCTATCCAGAGTATGTGGCACCAAACAATCCAGCTGTTCCTGACTTGAAATTTTCAATTGATGTGTCAAGGGCAAGGAATGTGGCTTGTTATTTCAGCCATAGTTGCAGTCCAAATGTGTTTGTCCAGTTTGTGCTGTTTGACCATTACAACGCAGCTTATCCTCACCTCATGATCTTTGCCATGGAGAACATTCCACCATTGAGGGAGCTAAGCATTGACTATGGAATGATTGATGAATGGGTGGGAAAGTTAACCATGTAGTCAGGCTGTCTACT-AGAAGGCAATACTCAGTTTATCTTCCTTTGTTTTGATGCTTTCATAATCCTTCTCATGGAGATTTTTGAGGTGATTGCTGACAACAAGTTTCTCTGATGGCGAATAACAGAAGCTTGCATATGGGATGATGTTTCAAGCCTTCCCATGAGGAAGGCAAAGTCACAGCTCATTGTCATCCACTAGGCATCAACCGTCCGTTGTATATTTTTGCATGGTAGCTGCAGTGCCCCGTGGCTGATTCCCTCTCACCCTTGAAGCTTTATGCTTGCTTTTGTAGGAAGCTTGTTTTGCGCAGCAAGCACCGAGTTTCATACTTGACCTCTGTTTTTCTTTTTTTTTTCCCTTCAATTGCTACGAGAACTCCATATGTACATATATCTGTACATTACATGACTTCAAAATGTGTCCCACTTCTGTCTGTA]

[+] EMBL CB627321             [TCTTCGGCGCCGTCGTCGCCGGCGGCGTCGTCGGACTCCATCGACCTCAACTTCCTGCCGTTCCTCAAGAGGGAGCCCAAGTCGGAGCCGGCTTCACCGGAGCGAGGGCCTCTGCCGCTGCCGGCAGCGGCACCGCCGCCTCCACCTCCGCCGCCGCCCCCACCACCGCCACCGCAGGTGCAGGCGGCGACGGTGGCAACTCCGGTGCCGGCGACGCCCGACCTCTCGGCGGCGGCGGTGATGACGCCGCTGCAGTCGCTGCCGCCGAACCCCGAGGAGGAGACGCTCCTGGCGGAGTACTACCGGCTCGCGACGCTATACCTGTCGTCGGCGGGGGCGGCCGGCGTAATCGTGCCGGCGGCGGCGCCGGAGGCTTCCGCGGGGGCGGTGGCGCAGCCCGGGTCGGGGTCCGGCGCGAAGAAGCGGCGGCCGCGGTCGTCGGAGCTGGTGCGGGTGTCCTCGCTGAGCGTGCAGGACCAGATCTACTTCCGGGACCTGGTGCGCCGGGCGCGCATCACGTTCGAGTCTCTCCGCGGGATCCTGCTGCGGGACGACGAGCGCGCGGAGGTGCTCGGCCTCACGGGCGTCCCCGGGTTCGGCGCCGTCGACCGCCGCCGCGTCCGCGCCGACCTGCGTGCCGCGGCGCTGATGGGGGACCGAGACCTGTGGCTCAACCGCGACCGCCGAATCGTGGGGCCGATCCCGGGGATCTCGGTTGGGGACGCCTTCTTCTTCCGCATGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK067172             [                                                                                                                                                                      CGCCACCGCAGGTGCAGGCGGCGACGGTGGCAACTCCGGTGCCGGCGACGCCCGACCTCTCGGCGGCGGCGGTGATGACGCCGCTGCAGTCGCTGCCGCCGAACCCCGAGGAGGAGACGCTCCTGGCGGAGTACTACCGGCTCGCGACGCTATACCTGTCGTCGGCGGGGGCGGCCGGCGTAATCGTGCCGGCGGCGGCGCCGGAGGCCTCCGCGGGGGCGGTGGCGCAGCCCGGGTCGGGGTCCGGCGCGAAGAAGCGGCGGCCGCGGTCGTCGGAGCTGGTGCGGGTGTCCTCGCTGAGCGTGCAGGACCAGATCTACTTCCGGGACCTGGTGCGCCGGGCGCGCATCACGTTCGAGTCTCTCCGCGGGATCCTGCTGCGGGACGACGAGCGCGCGGAGGTGCTCGGCCTCACGGGCGTCCCCGGGTTCGGCGCCGTCGACCGCCGCCGCGTCCGCGCCGACCTGCGTGCCGCGGCGCTGATGGGGGACCGAGACCTGTGGCTCAACCGCGACCGCCGAATCGTGGGGCCGATCCCGGGGATCTCGGTTGGGGACGCCTTCTTCTTCCGCATGGAGCTTTGCGTGCTAGGGCTACACGGCCAGGTGCAGGCTGGGATCGACTTTGTCACGGCTGGGCAGTCTTCCTCAGGGGAGCCCATAGCCACATCTATCATCGTGTCCGGTGGGTATGAAGACGATGACGATCGCGGCGATGTACTTGTGTACACAGGACATGGTGGTCGTGACCCCAACCTCCACAAGCATTGTGTTGATCAGAAGCTTGAGGGTGGCAACCTTGCCCTCGAGCGTAGCATGGCCTATGGTATTGAGATCCGCGTGATCCGTGCTGTCAAGTCCAAGCGCAGCCCCGTCGGCAAGGTATACTTCTATGATGGCCTCTATAAGGTTGTTGACTACTGGCTTGACCGTGGGAAGTCTGGCTTCGGTGTTTACAAGTACAAAATGCTGCGCATCGAGGGGCAGGAGTCGATGGGCTCTGTAAATTTTCGACTAGCCGAACAGCTTAAGGTCAATGCCCTGACTTTCCGGCCAACAGGGTATTTGGGCTTTGATATTTCCATGGGTCGAGAGATCATGCCGGTTGCACTGTACAATGATGTTGATGATGATCGTGACCCACTTTTATTTGAGTATCTGGCGCGGCCAATATTTCCGTCCTCTGCAGTCCAAGGGAAGTTTGCTGAGGGTGGTGGCGGGTGTGAGTGCACTGAGAATTGCTCAATTGGATGTTACTGTGCACAGAGGAATGGCGGTGAGTTTGCATATGACAAGCTCGGTGCTCTTTTACGGGGCAAACCACTGGTATATGAGTGTGGGCCATATTGCCGGTGCCCACCTAGTTGCCCCAACAGGGTTAGTCAGAAGGGGCTTAGGAATCGGCTTGAGGTATTCCGGTCAAGGGAGACTGGGTGGGGTGTTCGGTCTTTGGATCTCATTAAGGCTGGAACCTTCATCTGTGAGTTTAGTGGGATAGTGCTCACTCATCAACAGTCAGAGATTATGGCTGCGAATGGTGATTGCTTGGTGCGGCCAAGCAGGTTCCCTCCAAGGTGGTTAGATTGGGGTGATGTCTCTGATGTCTATCCAGAGTATGTGGCACCAAACAATCCAGCTGTTCCTGACTTGAAATTTTCAATTGATGTGTCAAGGGCAAGGAATGTGGCTTGTTATTTCAGCCATAGTTGCAGTCCAAATGTGTTTGTCCAGTTTGTGCTGTTTGACCATTACAACGCAGCTTATCCTCACCTCATGATCTTTGCCATGGAGAACATTCCACCATTGAGGGAGCTAAGCATTGACTATGGAATGATTGATGAATGGGTGGGAAAGTTAACCATGTAGTCAGGCTGTCTACT AGAAGGCAATACTCAGTTTATCTTCCTTTGTTTTGATGCTTTCATAATCCTTCTCATGGAGATTTTTGAGGTGATTGCTGACAACAAGTTTCTCTGATGGCGAATAACAGAAGCTTGCATATGGGATGATGTTTCAAGCCTTCCCATGAGGAAGGCAAAGTCACAGCTCATTGTCATCCACTAGGCATCAACCGTCCGTTGTATATTTTTGCATGGTAGCTGCAGTGCCCCGTGGCTGATTCCCTCTCACCCTTGAAGCTTGATGCTTGCTTTTGTAGGAAGCTTGTTTTGCGCAGCAAGCACCGAGTTTCATACTTGACCTCTGTTTTTC TTTTTTTTTCCCTTCAATTGCTACGAGAACTCCATATGTACATATATCTGTACATTACATGACTTCAAAATGTGTCCCAC           ]
[+] EMBL CB628537             [                                                                                                                                                                                                                            ACCTCTCGGCGGCGGCGGTGATGACGCCGCTGCAGTCGCTGCCGCCGAACCCCGAGGAGGAGACGCTCCTGGCGGAGTACTACCGGCTCGCGACGCTATACCTGTCGTCGGCGGGGGCGGCCGGCGTAATCGTGCCGGCGGCGGCGCCGGAGGCTTCCGCGGGGGCGGTGGCGCAGCCCGGGTCGGGGTCCGGCGCGAAGAAGCGGCGGCCGCGGTCGTCGGAGCTGGTGCGGGTGTCCTCGCTGAGCGTGCAGGACCAGATCTACTTCCGGGACCTGGTGCGCCGGGCGCGCATCACGTTCGAGTCTCTCCGCGGGATCCTGCTGCGGGACGACGAGCGCGCGGAGGTGCTCGGCCTCACGGGCGTCCCCGGGTTCGGCGCCGTCGACCGCCGCCGCGTCCGCGCCGACCTGCGTGCCGCGGCGCTGATGGGGGACCGAGACCTGTGGCTCAACCGCGACCGCCGAATCGTGGGGCCGATCCCGGGGATCTCGGTTGGGGACGCCTTCTTCTTCCGCATGGAGCTTTGCGTGCTAGGGCTACACGGCCAGGTGCAGGCTGGGATCGACTTTGTCACGGCTGGGCAGTCTTCCTCAGGGGAGCCCATAGCCACATCTATCATCGTGTCCGGTGGGTATGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB638099             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACGTCCGAGTCTCTCCGCGGGATCCTGCTGCGGGACGACGAGCGCGCGGAGGTGCTCGGCCTCACGGGCGTCCCCGGGTTCGGCGCCGTCGACCGCCGCCGCGTCCGCGCCGACCTGCGTGCCGCGGTGCTGATGGGGGACCGATACCTGTGGCTCAACCGCGACCGCCGAATCGTGGGGCCGATCCCGGGGATCTCGGTTGGGGACGCCTTCTTCTTCCGCATGGAGCTTTGCGTGCTAGGGCTACACGGCCAGGTGCAGGCTGGGATCGACTTTGTCACGGCTGGGCAGTCTTNCTCAGGGGAGCCCATAGCCACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB665276             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGGGATCGACTTTGTCACGGCTGGGCAGTCTTCCTCAGGGGAGCCCATAGCCACATCTATCATCGTGTCCGGTGGGTATGAAGACGATGACGATCGCGGCGATGTACTTGTGTACACAGGACATGGTGGTCGTGACCCCAACCTCCACAAGCATTGTGTTGATCAGAAGCTTGAGGGTGGCAACCTTGCCCTCGAGCGTAGCATGGCCTATGGTATTGAGATCCGCGTGATCCGTGCTGTCAAGTCCAAGCGCAGCCCCGTCGGCAAGGTATACTTCTATGATGGCCTCTATAAGGTTGTTGACTACTGGCTTGACCGTGGGAAGTCTGGCTTCGGTGTTTACAAGTACAAAATGCTGCGCATCGAGGGGCAGGAGTCGATGGGCTCTGTAAATTTTCGACTAGCCGAACAGCTTAAGGTCAATGCCCTGACTTTCCGGCCAACAGGGTATTTGGGCTTTGATATTTCCATGGGTCGAGAGATCATGCCGGTTGCACTGTACAATGATGTTGATGATGATCGTGACCCACTTTTATTTGAGTATCTGGCGCGGCCAATATTTCCGTCCTCTGCAGTCCAAGGGAAGTTTGCTGAGGGTGGTGGCGGGTGTGAGTGCACTGAGAATTGCTCAATTGGATGTTACTGTGCACAGAGGAATGGCGGTGAGTTTGCATATGACAAGCTCGGTGCTCTTTTACGGGGCAAACCACTGGTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB628538             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATAGTGCTCACTCATCAACAGTCAGAGATTATGGCTGCGAATGGTGATTGCTTGGTGCGGCCAAGCAGGTTCCCTCCAAGGTGGTTAGATTGGGGTGATGTCTCTGATGTCTATCCAGAGTATGTGGCACCAAACAATCCAGCTGTTCCTGACTTGAAATTTTCAATTGATGTGTCAAGGGCAAGGAATGTGGCTTGTTATTTCAGCCATAGTTGCAGTCCAAATGTGTTTGTCCAGTTTGTGCTGTTTGACCATTACAACGCAGCTTATCCTCACCTCATGATCTTTGCCATGGAGAACATTCCACCATTGAGGGAGCTAAGCATTGACTATGGAATGATTGATGAATGGGTGGGAAAGTTAACCATGTAGTCAGGCTGTCTACT AGAAGGCAATACTCAGTTTATCTTCCTTTGTTTTGATGCTTTCATAATCCTTCTCATGGAGATTTTTGAGGTGATTGCTGACAACAAGTTTCTCTGATGGCGAATAACAGAAGCTTGCATATGGGATGATGTTTCAAGCCTTCCCATGAGGAAGGCAAAGTCACAGCTCATTGTCATCCACTAGGCATCAACCGTCCGTTGTATATTTTTGCATGGTAGCTGCAGTGCCCCGTGGCTGATTCCCTCTCACCCTTGAAGCTTTATGCTTGCTTTTGTAGGAAGCTTGTTTTGCGCAGCAAGCACCGAGTTTCATACTTGACCTCTGTTTTTCTTTTTTTTTTCCCTTCAATTGCTACGAGAACTCCATATGTACATATATCTGTACATTACATGACTTCAAAATGTGTCCCACTTCTGTCTGTA]
[-] EMBL CB665277             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CACTCATCAACAGTCAGAGATTATGGCTGCGAATGGTGATTGCTTGGTGCGGCCAAGCAGGTTCCCTCCAAGGTGGTTAGATTGGGGTGATGTCTCTGATGTCTATCCAGAGTATGTGGCACCAAACAATCCAGCTGTTCCTGACTTGAAATTTTCAATTGATGTGTCAAGGGCAAGGAATGTGGCTTGTTATTTCAGCCATAGTTGCAGTCCAAATGTGTTTGTCCAGTTTGTGCTGTTTGACCATTACAACGCAGCTTATCCTCACCTCATGATCTTTGCCATGGAGAACATTCCACCATTGAGGGAGCTAAGCATTGACTATGGAATGATTGATGAATGGGTGGGAAAGTTAACCATGTAGTCAGGCTGTCTACT AGAAGGCAATACTCAGTTTATCTTCCTTTGTTTTGATGCTTTCATAATCCTTCTCATGGAGATTTTTGAGGTGATTGCTGACAACAAGTTTCTCTGATGGCGAATAACAGAAGCTTGCATATGGGATGATGTTTCAAGCCTTCCCATGAGGAAGGCAAAGTCACAGCTCATTGTCATCCACTAGGCATCAACCGTCCGTTGTATATTTTTGCATGGTAGCTGCAGTGCCCCGTGGCTGATTCCCTCTCACCCTTGAAGCTTGATGCTTGCTTTTGTAGGAAGCTTGTTTTGCGCAGCAAGCACCGAGTTTCATACTTGACCTCTGTTTTTC TTTTTTTTTCCCTTCAATTGCTACGAGAACTCCATATGTACATATATCTGTACATTACATGACTT                          ]
[-] EMBL CB627322             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TATGGCTGCGAATGGTGATTGCTTGGTGCGGCCAAGCAGGTTCCCTCCAAGGTGGTTAGATTGGGGTGATGTCTCTGATGTCTATCCAGAGTATGTGGCACCAAACAATCCAGCTGTTCCTGACTTGAAATTTTCAATTGATGTGTCAAGGGCAAGGAATGTGGCTTGTTATTTCAGCCATAGTTGCAGTCCAAATGTGTTTGTCCAGTTTGTGCTGTTTGACCATTACAACGCAGCTTATCCTCACCTCATGATCTTTGCCATGGAGAACATTCCACCATTGAGGGAGCTAAGCATTGACTATGGAATGATTGATGAATGGGTGGGAAAGTTAACCATGTAGTCAGGCTGTCTACT AGAAGGCAATACTCAGTTTATCTTCCTTTGTTTTGATGCTTTCATAATCCTTCTCATGGAGATTTTTGAGGTGATTGCTGACAACAAGTTTCTCTGATGGCGAATAACAGAAGCTTGCATATGGGATGATGTTTCAAGCCTTCCCATGAGGAAGGCAAAGTCACAGCTCATTGTCATCCACTAGGCATCAACCGTCCGTTGTATATTTTTGCATGGTAGCTGCAGTGCCCCGTGGCTGATTCCCTCTCACCCTTGAAGCTTTATGCTTGCTTTTGTAGGAAGCTTGTTTTGCGCAGCAAGCACCGAGTTTCATACTTGACCTCTGTTTTTCTTTTTTTTTTCCCTTCAATTGCTACGAGAACTCCATATGTACATATATCTGTACATTGCATGACTTCAAAATGTGTCCCACT          ]
[+] EMBL BE228941             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGCTGTCTACTAANAAAGCAATACTCAGTTTATCTTCCTTTGTTTTGATGCTTTCATAATCCTTCTCATGGAGATTTTTGAGGTGATTGCTGACAACAAGTTTCTCTGATGGCGAATAACAGAAGCTTGCATATGGGATGATGTTTCAAGCCTTCCCATGAGGAAGGCAAAGTCACAGCTCATTGTCATCCACTAGGCATCAACCGTCCGTTGTNTATTTTTGCATGGTAGCTGCAGTGCCCCNTGGCTGATTCCCTCTCACCCTTGAAGCTTTATGCTTGCTTTTGTNGGAAGCTTGTTTTGCGCANCAAGCACCGAGTTTCATACTTGACCTCTGTTTTTCTTTTTTTTTTCCCTTCAATTGCTACGANAACTCCATATGTTCNTATATCTGTACATTACATGACTTCNAAATGTGTCCCAC           ]




>consensus_12344#0
TCTTCGGCGCCGTCGTCGCCGGCGGCGTCGTCGGACTCCATCGACCTCAACTTCCTGCCG
TTCCTCAAGAGGGAGCCCAAGTCGGAGCCGGCTTCACCGGAGCGAGGGCCTCTGCCGCTG
CCGGCAGCGGCACCGCCGCCTCCACCTCCGCCGCCGCCCCCACCACCGCCACCGCAGGTG
CAGGCGGCGACGGTGGCAACTCCGGTGCCGGCGACGCCCGACCTCTCGGCGGCGGCGGTG
ATGACGCCGCTGCAGTCGCTGCCGCCGAACCCCGAGGAGGAGACGCTCCTGGCGGAGTAC
TACCGGCTCGCGACGCTATACCTGTCGTCGGCGGGGGCGGCCGGCGTAATCGTGCCGGCG
GCGGCGCCGGAGGCTTCCGCGGGGGCGGTGGCGCAGCCCGGGTCGGGGTCCGGCGCGAAG
AAGCGGCGGCCGCGGTCGTCGGAGCTGGTGCGGGTGTCCTCGCTGAGCGTGCAGGACCAG
ATCTACTTCCGGGACCTGGTGCGCCGGGCGCGCATCACGTTCGAGTCTCTCCGCGGGATC
CTGCTGCGGGACGACGAGCGCGCGGAGGTGCTCGGCCTCACGGGCGTCCCCGGGTTCGGC
GCCGTCGACCGCCGCCGCGTCCGCGCCGACCTGCGTGCCGCGGCGCTGATGGGGGACCGA
GACCTGTGGCTCAACCGCGACCGCCGAATCGTGGGGCCGATCCCGGGGATCTCGGTTGGG
GACGCCTTCTTCTTCCGCATGGAGCTTTGCGTGCTAGGGCTACACGGCCAGGTGCAGGCT
GGGATCGACTTTGTCACGGCTGGGCAGTCTTCCTCAGGGGAGCCCATAGCCACATCTATC
ATCGTGTCCGGTGGGTATGAAGACGATGACGATCGCGGCGATGTACTTGTGTACACAGGA
CATGGTGGTCGTGACCCCAACCTCCACAAGCATTGTGTTGATCAGAAGCTTGAGGGTGGC
AACCTTGCCCTCGAGCGTAGCATGGCCTATGGTATTGAGATCCGCGTGATCCGTGCTGTC
AAGTCCAAGCGCAGCCCCGTCGGCAAGGTATACTTCTATGATGGCCTCTATAAGGTTGTT
GACTACTGGCTTGACCGTGGGAAGTCTGGCTTCGGTGTTTACAAGTACAAAATGCTGCGC
ATCGAGGGGCAGGAGTCGATGGGCTCTGTAAATTTTCGACTAGCCGAACAGCTTAAGGTC
AATGCCCTGACTTTCCGGCCAACAGGGTATTTGGGCTTTGATATTTCCATGGGTCGAGAG
ATCATGCCGGTTGCACTGTACAATGATGTTGATGATGATCGTGACCCACTTTTATTTGAG
TATCTGGCGCGGCCAATATTTCCGTCCTCTGCAGTCCAAGGGAAGTTTGCTGAGGGTGGT
GGCGGGTGTGAGTGCACTGAGAATTGCTCAATTGGATGTTACTGTGCACAGAGGAATGGC
GGTGAGTTTGCATATGACAAGCTCGGTGCTCTTTTACGGGGCAAACCACTGGTATATGAG
TGTGGGCCATATTGCCGGTGCCCACCTAGTTGCCCCAACAGGGTTAGTCAGAAGGGGCTT
AGGAATCGGCTTGAGGTATTCCGGTCAAGGGAGACTGGGTGGGGTGTTCGGTCTTTGGAT
CTCATTAAGGCTGGAACCTTCATCTGTGAGTTTAGTGGGATAGTGCTCACTCATCAACAG
TCAGAGATTATGGCTGCGAATGGTGATTGCTTGGTGCGGCCAAGCAGGTTCCCTCCAAGG
TGGTTAGATTGGGGTGATGTCTCTGATGTCTATCCAGAGTATGTGGCACCAAACAATCCA
GCTGTTCCTGACTTGAAATTTTCAATTGATGTGTCAAGGGCAAGGAATGTGGCTTGTTAT
TTCAGCCATAGTTGCAGTCCAAATGTGTTTGTCCAGTTTGTGCTGTTTGACCATTACAAC
GCAGCTTATCCTCACCTCATGATCTTTGCCATGGAGAACATTCCACCATTGAGGGAGCTA
AGCATTGACTATGGAATGATTGATGAATGGGTGGGAAAGTTAACCATGTAGTCAGGCTGT
CTACTAGAAGGCAATACTCAGTTTATCTTCCTTTGTTTTGATGCTTTCATAATCCTTCTC
ATGGAGATTTTTGAGGTGATTGCTGACAACAAGTTTCTCTGATGGCGAATAACAGAAGCT
TGCATATGGGATGATGTTTCAAGCCTTCCCATGAGGAAGGCAAAGTCACAGCTCATTGTC
ATCCACTAGGCATCAACCGTCCGTTGTATATTTTTGCATGGTAGCTGCAGTGCCCCGTGG
CTGATTCCCTCTCACCCTTGAAGCTTTATGCTTGCTTTTGTAGGAAGCTTGTTTTGCGCA
GCAAGCACCGAGTTTCATACTTGACCTCTGTTTTTCTTTTTTTTTTCCCTTCAATTGCTA
CGAGAACTCCATATGTACATATATCTGTACATTACATGACTTCAAAATGTGTCCCACTTC
TGTCTGTA

consensusID : consensus_12344#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence

                              [GCCTCATCGCCGATTCAACCGATTCGCCATCGCCCCCCACCTCGCCGCCGTCGCCGCCGCCGCCTCGTAAACCGGTGGGATTTTGCGGGGAGGAGGGAGTTTGGTGCGGGAGAAGGGGGCGGAGGAGTGGGTGGTTTTGTTTTTTTTTTTTTTTTGTATTTTGTTTTTGTGTGTGAGAGAGGGGGGAAGGGGGCAATGGAGATGGACACATCGCCATCGTCTTCGGCGCCGTCGTCGNCGGCGGGTACGTCGGACTCCATCGACCTCAACTTCCTGCCGTTCCTCAAGAGGGAGCCCAAGTCGGAGCCGGCTTCACCGGAGCGAGGGCTTNTGCCGTTGCCGGNAGCGNACCCGCGCTTCAACTTCGACGCCGCCCCAACAACGCAACGAAGTAAGGGCGGC]

[+] EMBL AU165970             [GCCTCATCGCCGATTCAACCGATTCGCCATCGCCCCCCACCTCGCCGCCGTCGCCGCCGCCGCCTCGTAAACCGGTGGGATTTTGCGGGGAGGAGGGAGTTTGGTGCGGGAGAAGGGGGCGGAGGAGTGGGTGGTTTTGTTTTTTTTTTTTTTTTGTATTTTGTTTTTGTGTGTGAGAGAGGGGGGAAGGGGGCAATGGAGATGGACACATCGCCATCGTCTTCGGCGCCGTCGTCGNCGGCGGGTACGTCGGACTCCATCGACCTCAACTTCCTGCCGTTCCTCAAGAGGGAGCCCAAGTCGGAGCCGGCTTCACCGGAGCGAGGGCTTNTGCCGTTGCCGGNAGCGNACCCGCGCTTCAACTTCGACGCCGCCCCAACAACGCAACGAAGTAAGGGCGGC]




>consensus_12344#1
GCCTCATCGCCGATTCAACCGATTCGCCATCGCCCCCCACCTCGCCGCCGTCGCCGCCGC
CGCCTCGTAAACCGGTGGGATTTTGCGGGGAGGAGGGAGTTTGGTGCGGGAGAAGGGGGC
GGAGGAGTGGGTGGTTTTGTTTTTTTTTTTTTTTTGTATTTTGTTTTTGTGTGTGAGAGA
GGGGGGAAGGGGGCAATGGAGATGGACACATCGCCATCGTCTTCGGCGCCGTCGTCGNCG
GCGGGTACGTCGGACTCCATCGACCTCAACTTCCTGCCGTTCCTCAAGAGGGAGCCCAAG
TCGGAGCCGGCTTCACCGGAGCGAGGGCTTNTGCCGTTGCCGGNAGCGNACCCGCGCTTC
AACTTCGACGCCGCCCCAACAACGCAACGAAGTAAGGGCGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12344#0      TCTTCGGCGCCGTCGTCGCCGGCGGCGTCGTCGGACTCCATCGACCTCAACTTC-CTGCC 59
consensus_12344#1      --------GCC-TCATCGCCGATTCAACCGATT--CGCCATCGCCCCCCACCTCGCCGCC 49
                               *** ** ******       **     * ****** ** * ** ** * ***

consensus_12344#0      GTTCCTCAAGAGGGAGCCCAAGTCGGAGCCGGCTTCACCGGAGCGAGGGCCTCTGCCGCT 119
consensus_12344#1      GTCGCCGCCGCCGCCTCGTAAACCGGTGG-GATTTTGCGGGGAGGAGGGAGTTTGGTGCG 108
                       **  *    *  *   *  **  *** *  *  **  * **   *****  * **  ** 

consensus_12344#0      GCCGGCAGCGGCACCGCCGCCTCCACCTCCGCCGCCGCCCCCACCACCGCCACCGCAGGT 179
consensus_12344#1      GGAGAAGGGGGCGGAGGAGTGGGTGGTTTTGTTTTTTTTTTTTTTTTGTATTTTGTTTTT 168
                       *  *   * ***   *  *        *  *                       *    *

consensus_12344#0      GCAGGCGGCGACGGTGGCAACTCCGGTGCCGGCGACGCCCGACCTCTCGGCGGCGGCGGT 239
consensus_12344#1      GTGTGTGAGAGAGGGGGGAA----GGGGGCAATGGAGATGGACACATCGCCATCGTCTTC 224
                       *   * *     ** ** **    ** * *   *  *   ***   *** *  ** *   

consensus_12344#0      GATGACGCCGCTGCAGTCGCTGCCGCCGAACCCCGAGGAGGAGACGCTCCTGGCGGAGTA 299
consensus_12344#1      GGCGCCGTCGTCGNCGGCGGGTACGTCGGACTCCATCGACCTCAACTTCCTGCCGTTCCT 284
                       *  * ** **  *  * **    ** ** ** **   **    *   ***** **     

consensus_12344#0      CTACCGGCTCGCGACGCTATACCTGTCGTCGGCGGGGGCGGCCGGCGTAATCGTGCCGGC 359
consensus_12344#1      CAAGAGGGAGCCCAAGTCGGAGCCGGCTTCACCGGAGCGAG--GGC----TTNTGCCGTT 338
                       * *  **    * * *    * * * * **  *** *   *  ***    *  *****  

consensus_12344#0      GGCGGCGCCGGAGGCTTCCGCGGGGGCGGTGGCGCAGCCCGGGTCGGGGTCCGGCGCGAA 419
consensus_12344#1      GCCGGNAGCGNA--CCCGCGCTTCAACTTCGACGCCGCCCCAACAA-----CGCAACGAA 391
                       * ***   ** *  *   ***     *   * *** ****           **   ****

consensus_12344#0      GAAGCGGCGGCCGCGGTCGTCGGAGCTGGTGCGGGTGTCCTCGCTGAGCGTGCAGGACCA 479
consensus_12344#1      GTAAGGGCGGC------------------------------------------------- 402
                       * *  ******                                                 

consensus_12344#0      GATCTACTTCCGGGACCTGGTGCGCCGGGCGCGCATCACGTTCGAGTCTCTCCGCGGGAT 539
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CCTGCTGCGGGACGACGAGCGCGCGGAGGTGCTCGGCCTCACGGGCGTCCCCGGGTTCGG 599
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CGCCGTCGACCGCCGCCGCGTCCGCGCCGACCTGCGTGCCGCGGCGCTGATGGGGGACCG 659
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      AGACCTGTGGCTCAACCGCGACCGCCGAATCGTGGGGCCGATCCCGGGGATCTCGGTTGG 719
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      GGACGCCTTCTTCTTCCGCATGGAGCTTTGCGTGCTAGGGCTACACGGCCAGGTGCAGGC 779
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      TGGGATCGACTTTGTCACGGCTGGGCAGTCTTCCTCAGGGGAGCCCATAGCCACATCTAT 839
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CATCGTGTCCGGTGGGTATGAAGACGATGACGATCGCGGCGATGTACTTGTGTACACAGG 899
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      ACATGGTGGTCGTGACCCCAACCTCCACAAGCATTGTGTTGATCAGAAGCTTGAGGGTGG 959
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CAACCTTGCCCTCGAGCGTAGCATGGCCTATGGTATTGAGATCCGCGTGATCCGTGCTGT 1019
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CAAGTCCAAGCGCAGCCCCGTCGGCAAGGTATACTTCTATGATGGCCTCTATAAGGTTGT 1079
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      TGACTACTGGCTTGACCGTGGGAAGTCTGGCTTCGGTGTTTACAAGTACAAAATGCTGCG 1139
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CATCGAGGGGCAGGAGTCGATGGGCTCTGTAAATTTTCGACTAGCCGAACAGCTTAAGGT 1199
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CAATGCCCTGACTTTCCGGCCAACAGGGTATTTGGGCTTTGATATTTCCATGGGTCGAGA 1259
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      GATCATGCCGGTTGCACTGTACAATGATGTTGATGATGATCGTGACCCACTTTTATTTGA 1319
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      GTATCTGGCGCGGCCAATATTTCCGTCCTCTGCAGTCCAAGGGAAGTTTGCTGAGGGTGG 1379
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      TGGCGGGTGTGAGTGCACTGAGAATTGCTCAATTGGATGTTACTGTGCACAGAGGAATGG 1439
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CGGTGAGTTTGCATATGACAAGCTCGGTGCTCTTTTACGGGGCAAACCACTGGTATATGA 1499
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      GTGTGGGCCATATTGCCGGTGCCCACCTAGTTGCCCCAACAGGGTTAGTCAGAAGGGGCT 1559
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      TAGGAATCGGCTTGAGGTATTCCGGTCAAGGGAGACTGGGTGGGGTGTTCGGTCTTTGGA 1619
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      TCTCATTAAGGCTGGAACCTTCATCTGTGAGTTTAGTGGGATAGTGCTCACTCATCAACA 1679
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      GTCAGAGATTATGGCTGCGAATGGTGATTGCTTGGTGCGGCCAAGCAGGTTCCCTCCAAG 1739
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      GTGGTTAGATTGGGGTGATGTCTCTGATGTCTATCCAGAGTATGTGGCACCAAACAATCC 1799
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      AGCTGTTCCTGACTTGAAATTTTCAATTGATGTGTCAAGGGCAAGGAATGTGGCTTGTTA 1859
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      TTTCAGCCATAGTTGCAGTCCAAATGTGTTTGTCCAGTTTGTGCTGTTTGACCATTACAA 1919
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CGCAGCTTATCCTCACCTCATGATCTTTGCCATGGAGAACATTCCACCATTGAGGGAGCT 1979
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      AAGCATTGACTATGGAATGATTGATGAATGGGTGGGAAAGTTAACCATGTAGTCAGGCTG 2039
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      TCTACTAGAAGGCAATACTCAGTTTATCTTCCTTTGTTTTGATGCTTTCATAATCCTTCT 2099
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CATGGAGATTTTTGAGGTGATTGCTGACAACAAGTTTCTCTGATGGCGAATAACAGAAGC 2159
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      TTGCATATGGGATGATGTTTCAAGCCTTCCCATGAGGAAGGCAAAGTCACAGCTCATTGT 2219
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CATCCACTAGGCATCAACCGTCCGTTGTATATTTTTGCATGGTAGCTGCAGTGCCCCGTG 2279
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      GCTGATTCCCTCTCACCCTTGAAGCTTTATGCTTGCTTTTGTAGGAAGCTTGTTTTGCGC 2339
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      AGCAAGCACCGAGTTTCATACTTGACCTCTGTTTTTCTTTTTTTTTTCCCTTCAATTGCT 2399
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      ACGAGAACTCCATATGTACATATATCTGTACATTACATGACTTCAAAATGTGTCCCACTT 2459
consensus_12344#1      ------------------------------------------------------------
                                                                                   

consensus_12344#0      CTGTCTGTA 2468
consensus_12344#1      ---------