These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12358#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1424 fasta sequence [GCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGC-AAGGACAAGGAGGTCA-TGAACAT-CAATGGCATTG-CACAAGATGGCA-CAGTACAAGGTTC-AGAACAG-CCATGATCAGTAATTCAGTATGATGATGATGAACAT-CCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG-ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAGATGCATATGTTTTTCATTCATATTTGGTACGTCTCTTATTCAAAGAAGAAATA] [+] EMBL AK100930 [GCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGC AAGGACAAGGAGGTCA TGAACAT CAATGGCATTG CACAAGATGGCA CAGTACAAGGTTC AGAACAG CCATGATCAGTAATTCAGTATGATGATGATGAACAT CCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCC ] [+] EMBL AK072273 [GCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAGGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGC AAGGACAAGGAGGTCA TGAACAT CAATGGCATTG CACAAGATGGCA CAGTACAAGGTTC AGAACAG CCATGATCAGTAATTCAGTATGATGATGATGAACAT CCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTT ] [+] EMBL AK060552 [ attgtggCAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGC AAGGACAAGGAGGTCA TGAACAT CAATGGCATTG CACAAGATGGCA CAGTACAAGGTTC AGAACAG CCATGATCAGTAATTCAGTATGATGATGATGAACAT CCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAGATGCATATGTTTTTCATTCATATTTGGTACGTCTCTTATTCAAAGAAGAAATA] [+] EMBL AU083555 [ ACCATGAGCAGCACGCCATGGGCAAAGGACAAGGAGGTCATTGACCATCCAATGGCATTGCCACAAGATGGCACCAGTACAAGGTTCAAGAACAGCCCATGATCAGTAATTCAGTATGATGATGATGAACATCCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAaa ] [+] EMBL AU173027 [ AAATCTACAGTTTC AGAAGGGNATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAGATGCATATGTTTTTCATTCAaaaaaaaa ] consensusID : consensus_12358#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1103 fasta sequence [CCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGGCGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGTACGTGATCGTTGCATTTTTGAACTGGCGGGTGTTCAAATTTGATTTGATTTATAATACAAAATGATGTCAAATGTGGGGGCGAATTTCGTCTGAATTCGAGCTGAATTGTGGCAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCG-CCGCCGCCTGC-TGCAAGAAC-TGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCA-TGTCATCGGCGGCGGCGGCGGAGCG-CCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGATCAGTAATTCAGTATGATGATGATAAACATCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGG] [-] EMBL AK119508 [CCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGGCGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGTACGTGATCGTTGCATTTTTGAACTGGCGGGTGTTCAAATTTGATTTGATTTATAATACAAAATGATGTCAAATGTGGGGGCGAATTTCGTCTGAATTCGAGCTGAATTGTGGCAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCG CCGCCGCCTGC TGCAAGAAC TGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCA TGTCATCGGCGGCGGCGGCGGAGCG CCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGATCAGTAATTCAGTATGATGATGATAAACATCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGG] [+] EMBL AU096355 [ TGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGANGACGACGACGACGACGATCTCGTNGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCG CCG CGCCTGC TGCAAGAAC TGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGA TTCA TGTCATCGGCGGCGGCGGCGGA CGACCATGGCTGCAGGCGGTGCGCCGAGCTGCAC GCCGGTTTGAGGAGA ] [+] EMBL OSS12988A [ TGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGNCCGC CTTGCTTGCAAGAACTTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGNTCGTCGACTTCATTGTCATCGGCGGCG ] consensusID : consensus_12358#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence [CAGGGGAGCTTTTCTGGTCCCCGGGGGCAGCAACCCTGAGCAGCACGCCATGGGCAAGGCCAAGGAGGTCATGACCATCAATGGCCTTGCACAAGATGGCACAGTTCAAGGTTTAGAACAGCCATGATCAGTAATTCAGTCCGATGATGATGAACATCCAAAGATCGAGCATTTTGGCGCTGATGTTTACAACCACTGATGGGTTTTTGGATTTGAGCAATGGCGCGGGTTGGTGCCGCCCCCATGTTCATGACCTTGGTAGCTCAAAGGATTCATGATCTTTGTGAGGGGGAATTGCTCATTGTGAGGGGGGAATTGTTGACAGCAATTTCGATCAGCCGCTGCTCCCTTTTAGAGGTTACCTTGCCGACCCATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTTGACATGCCCTTTTGACAAAGTAAATTTCCAGTTTCAAGATTGGATTTGCTCGTCTTTTTTTTAGAGATTTAGCATTTTTTGTAGGGAAGAAACTGAAAAAGATGTGGTATAACGTTTTGTGGCTGTGCTATGAATTTGAAGAAGATAGGGTCCCGTTTAGGTAGGCCAAGTGCAATTTCTTCCAATTTTCATTGGCTTCCGGTTGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAA] [-] EMBL CA761683 [CAGGGGAGCTTTTCTGGTCCCCGGGGGCAGCAACCCTGAGCAGCACGCCATGGGCAAGGCCAAGGAGGTCATGACCATCAATGGCCTTGCACAAGATGGCACAGTTCAAGGTTTAGAACAGCCATGATCAGTAATTCAGTCCGATGATGATGAACATCCAAAGATCGAGCATTTTGGCGCTGATGTTTACAACCACTGATGGGTTTTTGGATTTGAGCAATGGCGCGGGTTGGTGCCGCCCCCATGTTCATGACCTTGGTAGCTCAAAGGATTCATGATCTTTGTGAGGGGGAATTGCTCATTGTGAGGGGGGAATTGTTGACAGCAATTTCGATCAGCCGCTGCTCCCTTTTAGAGGTTACCTTGCCGACCCATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTTGACATGCCCTTTTGACAAAGTAAATTTCCAGTTTCAAGATTGGATTTGCTCGTCTTTTTTTTAGAGATTTAGCATTTTTTGTAGGGAAGAAACTGAAAAAGATGTGGTATAACGTTTTGTGGCTGTGCTATGAATTTGAAGAAGATAGGGTCCCGTTTAGGTAGGCCAAGTGCAATTTCTTCCAATTTTCATTGGCTTCCGGTTGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAA] consensusID : consensus_12358#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence [CAAGGTTTACTGATGGATGATGAACATCCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGGATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAAA] [+] EMBL AU096356 [CAAGGTTTACTGATGGATGATGAACATCCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGGATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 GCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGA 60 consensus_12358#1 ------------------------------------------------------------ consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 CGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGC 120 consensus_12358#1 ------------------------------------------------------------ consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 CGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGAC 180 consensus_12358#1 ------------------------------------------------------------ consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 GGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGG 240 consensus_12358#1 ------------------------------------------------------------ consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 CCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGA 300 consensus_12358#1 ------------------------------------------------------------ consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 GATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGA 360 consensus_12358#1 -------------------------------------CCGTCGAATAGCGTCGGCGACAA 23 consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 CGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGA 420 consensus_12358#1 CGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACAT 83 consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 CGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGC 480 consensus_12358#1 CCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGT 143 consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 CTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGA 540 consensus_12358#1 CGGTGGCGTGGACATCACCATCAAGGGGAGGAGGGCGGACGACGGCGGCGTCTACCTCGG 203 consensus_12358#2 ------------------------------------------------------------ consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 CTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCA 600 consensus_12358#1 CCTGCGCATCGCCGACAAGAACGGCACAGGTACGTGATCGTTGCATTTTTGAACTGGCGG 263 consensus_12358#2 ----------------------------------------------------------CA 2 consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 CGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCA 660 consensus_12358#1 GTGTTCAAATTTGATTTGATTTATAATACAAAATGATGTCAAATGTGGGGGCGAATTTCG 323 consensus_12358#2 GGGGAGCTTTTCTGGTCCCCGGGGGCAGCAACCCTGAGCAGCACGCCATGGG--CAAGGC 60 consensus_12358#3 ------------------------------------------------------------ consensus_12358#0 GGGGAGCTCCTCTGA-CACCGGAGGCAGCAACCATGAGCAGCACGCCATGGG--CAAGGA 717 consensus_12358#1 TCTGAATTCGAGCTGAATTGTGGCAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACAC 383 consensus_12358#2 CAAGGAGGTCATGACCATCAATGGCCTTGCACAAGATGGCACAGTTCAAGGTTTA--GAA 118 consensus_12358#3 ----------------------------------------------CAAGGTTTACTGAT 14 consensus_12358#0 CAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCA--GAA 775 consensus_12358#1 CGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGA 443 * * consensus_12358#2 CAGCCATGATCAGTAATTCAGTCCGATGATGATGAACATCCAAAGATCGAGCATTTTGGC 178 consensus_12358#3 GGATGATGAACATCCCGAAGATCGAGCAAT--TCGACGCTGATAGGCGATACGGATCGGC 72 consensus_12358#0 CAGCCATGATCAGTAATTCAGTATGATGATGATGAACATCCGAAGATCGAGCAATTCGAC 835 consensus_12358#1 CCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAA-GGTCGCCGCGCTGGTGCCGG 502 * * ** * * consensus_12358#2 GCTG--------------------ATGTTTACAACCACTGATGGGTTTTTGGATTTGAGC 218 consensus_12358#3 G-----------------------ATGTTTACAACCATTGATGGGTTCTTGGATTTGAGC 109 consensus_12358#0 GCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGC 895 consensus_12358#1 GCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGAC-GACGATCTCGTCGGCGGCGGC 561 * * * ** ** * ** * * * * ** consensus_12358#2 AATG--------GCGCGGGTTGGTGCCGCCCCCATGTTC-ATGACCTTGGTAGCTCAAAG 269 consensus_12358#3 AATG--------GCGCGAGTCGGTGCCGCCACCATGATC-ATGACCATGGTAGCTCAAAG 160 consensus_12358#0 AATG--------GCGCGAGTCGGTGCCGCCACCATGATC-ATGACCATGGTAGCTCAAAG 946 consensus_12358#1 GATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCG 621 *** **** * ** ****** ** * * * * * * consensus_12358#2 GATTCATGATCTTTGTGAGGGGGAATTGCTCATTGTGAGGGGGGAATTGTTGACAGCAAT 329 consensus_12358#3 GATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGG-AATTGCTGACAGCAAT 219 consensus_12358#0 GATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGG-AATTGCTGACAGCAAT 1005 consensus_12358#1 GCGTCGTCGTCGTCGTCCTGCGGC-TCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGC 680 * ** * ** * ** * ** * **** * * * ** * * * ** consensus_12358#2 TTCGATCAGCCGCTGCTCCCTTTTAG--AGGTTACCTTGCCGACCCATTGCAAGAGCAA- 386 consensus_12358#3 CTCGATCAGCCGCTGCTCACTTTCAG--AGGTTACCTTGCCGACACATTGCAAGAGCAA- 276 consensus_12358#0 CTCGATCAGCCGCTGCTCACTTTCAG--AGGTTACCTTGCCGACACATTGCAAGAGCAA- 1062 consensus_12358#1 GGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTT 740 * * ***** * * * * * * **** * * * consensus_12358#2 CAAAGTCTGTACTGTTGAACAATGCTACTGACGTTTGACATGCCCTTTTGACA----AAG 442 consensus_12358#3 CAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACA----AAG 332 consensus_12358#0 CAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACA----AAG 1118 consensus_12358#1 CCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGG 800 * *** * * *** * * * ** * * ***** * * consensus_12358#2 TA--AATTTCCAGTTTCAAGAT-TGGATTTGCTCGTCTTTTTTTTAGAGATT--TAGCAT 497 consensus_12358#3 TA--AATCTACAGTTTCAAGAT-TGGATTTGCTCGTCTTTTTTTCAGAGATT--TAGCAT 387 consensus_12358#0 TA--AATCTACAGTTTCAAGAT-TGGATTTGCTCGTCTTTTTTTCAGAGATT--TAGCAT 1173 consensus_12358#1 CAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCAT 860 * ** ** ** * *** * * * * ** * **** consensus_12358#2 T--------TTTTGTAGGGAAGAAACTGAAAAAGATGTGGT--ATAACGTTTTGTGGCTG 547 consensus_12358#3 A--------TATTGTAGGGAAGAAACTGAAA--GATGTAGT--ATAACGTTTTGTGACTG 435 consensus_12358#0 A--------TATTGTAGGGAAGAAACTGAAA--GATGTAGT--ATAACGTTTTGTGACTG 1221 consensus_12358#1 TGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGATCAGTAATTCAGTATGATGA 920 * ** * ** * * * *** * ** consensus_12358#2 TGCTATGAATTTGAAGAAGATAGGGTCCCGTTTAGGTAGGCCAAGTGCAAT-----TTCT 602 consensus_12358#3 TGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAAT-----TACT 490 consensus_12358#0 TGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAAT-----TACT 1276 consensus_12358#1 TGATAAACATCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTT 980 ** ** ** ***** * * * ***** * * * * * consensus_12358#2 TCCAATTTTCATTGGCTTCCGGTTGGTTTAAAAAAAAAAAAAA----------------- 645 consensus_12358#3 TCCAATCTTCATTGGCTTC-AGTTAGTTACATGCATGGCTGTATCTAGCATTCTC----T 545 consensus_12358#0 TCCAATCTTCATTGGCTTC-AGTTAGTTACATGCATGGCTGTATCTAGCATTCTC----T 1331 consensus_12358#1 TACAACCATTGATGGGTTC--TTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCAT 1038 * *** * *** *** * ** * * * consensus_12358#2 AAAAAAAA--AAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAA----------------- 686 consensus_12358#3 GACCATAA--ATCAGTAGTGCAAGAAAGTGCAATCAGGAAAAA----------------- 586 consensus_12358#0 GACCATAA--ATCAGTAGTGCAAGAAAGTGCAATCAGGAAAGATGCATATGTTTTTCATT 1389 consensus_12358#1 GATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGT 1098 * * * * ** * * * consensus_12358#2 ----------------------------------- consensus_12358#3 ----------------------------------- consensus_12358#0 CATATTTGGTACGTCTCTTATTCAAAGAAGAAATA 1424 consensus_12358#1 GAGGG------------------------------ 1103 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||