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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12358#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1424 fasta sequence
[GCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGC-AAGGACAAGGAGGTCA-TGAACAT-CAATGGCATTG-CACAAGATGGCA-CAGTACAAGGTTC-AGAACAG-CCATGATCAGTAATTCAGTATGATGATGATGAACAT-CCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG-ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAGATGCATATGTTTTTCATTCATATTTGGTACGTCTCTTATTCAAAGAAGAAATA]
[+] EMBL AK100930 [GCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGC AAGGACAAGGAGGTCA TGAACAT CAATGGCATTG CACAAGATGGCA CAGTACAAGGTTC AGAACAG CCATGATCAGTAATTCAGTATGATGATGATGAACAT CCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCC ]
[+] EMBL AK072273 [GCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAGGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGC AAGGACAAGGAGGTCA TGAACAT CAATGGCATTG CACAAGATGGCA CAGTACAAGGTTC AGAACAG CCATGATCAGTAATTCAGTATGATGATGATGAACAT CCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTT ]
[+] EMBL AK060552 [ attgtggCAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGC AAGGACAAGGAGGTCA TGAACAT CAATGGCATTG CACAAGATGGCA CAGTACAAGGTTC AGAACAG CCATGATCAGTAATTCAGTATGATGATGATGAACAT CCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAGATGCATATGTTTTTCATTCATATTTGGTACGTCTCTTATTCAAAGAAGAAATA]
[+] EMBL AU083555 [ ACCATGAGCAGCACGCCATGGGCAAAGGACAAGGAGGTCATTGACCATCCAATGGCATTGCCACAAGATGGCACCAGTACAAGGTTCAAGAACAGCCCATGATCAGTAATTCAGTATGATGATGATGAACATCCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGG ATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAaa ]
[+] EMBL AU173027 [ AAATCTACAGTTTC AGAAGGGNATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAGATGCATATGTTTTTCATTCAaaaaaaaa ]
consensusID : consensus_12358#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1103 fasta sequence
[CCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGGCGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGTACGTGATCGTTGCATTTTTGAACTGGCGGGTGTTCAAATTTGATTTGATTTATAATACAAAATGATGTCAAATGTGGGGGCGAATTTCGTCTGAATTCGAGCTGAATTGTGGCAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCG-CCGCCGCCTGC-TGCAAGAAC-TGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCA-TGTCATCGGCGGCGGCGGCGGAGCG-CCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGATCAGTAATTCAGTATGATGATGATAAACATCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGG]
[-] EMBL AK119508 [CCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGGCGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGTACGTGATCGTTGCATTTTTGAACTGGCGGGTGTTCAAATTTGATTTGATTTATAATACAAAATGATGTCAAATGTGGGGGCGAATTTCGTCTGAATTCGAGCTGAATTGTGGCAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCG CCGCCGCCTGC TGCAAGAAC TGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTCA TGTCATCGGCGGCGGCGGCGGAGCG CCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGATCAGTAATTCAGTATGATGATGATAAACATCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGG]
[+] EMBL AU096355 [ TGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGANGACGACGACGACGACGATCTCGTNGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCG CCG CGCCTGC TGCAAGAAC TGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGA TTCA TGTCATCGGCGGCGGCGGCGGA CGACCATGGCTGCAGGCGGTGCGCCGAGCTGCAC GCCGGTTTGAGGAGA ]
[+] EMBL OSS12988A [ TGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGNCCGC CTTGCTTGCAAGAACTTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGNTCGTCGACTTCATTGTCATCGGCGGCG ]
consensusID : consensus_12358#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence
[CAGGGGAGCTTTTCTGGTCCCCGGGGGCAGCAACCCTGAGCAGCACGCCATGGGCAAGGCCAAGGAGGTCATGACCATCAATGGCCTTGCACAAGATGGCACAGTTCAAGGTTTAGAACAGCCATGATCAGTAATTCAGTCCGATGATGATGAACATCCAAAGATCGAGCATTTTGGCGCTGATGTTTACAACCACTGATGGGTTTTTGGATTTGAGCAATGGCGCGGGTTGGTGCCGCCCCCATGTTCATGACCTTGGTAGCTCAAAGGATTCATGATCTTTGTGAGGGGGAATTGCTCATTGTGAGGGGGGAATTGTTGACAGCAATTTCGATCAGCCGCTGCTCCCTTTTAGAGGTTACCTTGCCGACCCATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTTGACATGCCCTTTTGACAAAGTAAATTTCCAGTTTCAAGATTGGATTTGCTCGTCTTTTTTTTAGAGATTTAGCATTTTTTGTAGGGAAGAAACTGAAAAAGATGTGGTATAACGTTTTGTGGCTGTGCTATGAATTTGAAGAAGATAGGGTCCCGTTTAGGTAGGCCAAGTGCAATTTCTTCCAATTTTCATTGGCTTCCGGTTGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAA]
[-] EMBL CA761683 [CAGGGGAGCTTTTCTGGTCCCCGGGGGCAGCAACCCTGAGCAGCACGCCATGGGCAAGGCCAAGGAGGTCATGACCATCAATGGCCTTGCACAAGATGGCACAGTTCAAGGTTTAGAACAGCCATGATCAGTAATTCAGTCCGATGATGATGAACATCCAAAGATCGAGCATTTTGGCGCTGATGTTTACAACCACTGATGGGTTTTTGGATTTGAGCAATGGCGCGGGTTGGTGCCGCCCCCATGTTCATGACCTTGGTAGCTCAAAGGATTCATGATCTTTGTGAGGGGGAATTGCTCATTGTGAGGGGGGAATTGTTGACAGCAATTTCGATCAGCCGCTGCTCCCTTTTAGAGGTTACCTTGCCGACCCATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTTGACATGCCCTTTTGACAAAGTAAATTTCCAGTTTCAAGATTGGATTTGCTCGTCTTTTTTTTAGAGATTTAGCATTTTTTGTAGGGAAGAAACTGAAAAAGATGTGGTATAACGTTTTGTGGCTGTGCTATGAATTTGAAGAAGATAGGGTCCCGTTTAGGTAGGCCAAGTGCAATTTCTTCCAATTTTCATTGGCTTCCGGTTGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAA]
consensusID : consensus_12358#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence
[CAAGGTTTACTGATGGATGATGAACATCCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGGATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAAA]
[+] EMBL AU096356 [CAAGGTTTACTGATGGATGATGAACATCCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCATGATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGGAATTGCTGACAGCAATCTCGATCAGCCGCTGCTCACTTTCAGAGGTTACCTTGCCGACACATTGCAAGAGCAACAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACAAAGTAAATCTACAGTTTCAAGATTGGATTTGCTCGTCTTTTTTTCAGAGATTTAGCATATATTGTAGGGAAGAAACTGAAAGATGTAGTATAACGTTTTGTGACTGTGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAATTACTTCCAATCTTCATTGGCTTCAGTTAGTTACATGCATGGCTGTATCTAGCATTCTCTGACCATAAATCAGTAGTGCAAGAAAGTGCAATCAGGAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 GCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGA 60
consensus_12358#1 ------------------------------------------------------------
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 CGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGC 120
consensus_12358#1 ------------------------------------------------------------
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 CGCCGCCGACGCCAACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGAC 180
consensus_12358#1 ------------------------------------------------------------
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 GGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGG 240
consensus_12358#1 ------------------------------------------------------------
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 CCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGA 300
consensus_12358#1 ------------------------------------------------------------
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 GATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGA 360
consensus_12358#1 -------------------------------------CCGTCGAATAGCGTCGGCGACAA 23
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 CGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGA 420
consensus_12358#1 CGACGTGGACGCGGCCGTGCAGCGGGGGGACGACGACGGTGACAACTGGCTCCGCGACAT 83
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 CGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGC 480
consensus_12358#1 CCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCAACGAGCGTGT 143
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 CTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGA 540
consensus_12358#1 CGGTGGCGTGGACATCACCATCAAGGGGAGGAGGGCGGACGACGGCGGCGTCTACCTCGG 203
consensus_12358#2 ------------------------------------------------------------
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 CTTCATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCA 600
consensus_12358#1 CCTGCGCATCGCCGACAAGAACGGCACAGGTACGTGATCGTTGCATTTTTGAACTGGCGG 263
consensus_12358#2 ----------------------------------------------------------CA 2
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 CGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCA 660
consensus_12358#1 GTGTTCAAATTTGATTTGATTTATAATACAAAATGATGTCAAATGTGGGGGCGAATTTCG 323
consensus_12358#2 GGGGAGCTTTTCTGGTCCCCGGGGGCAGCAACCCTGAGCAGCACGCCATGGG--CAAGGC 60
consensus_12358#3 ------------------------------------------------------------
consensus_12358#0 GGGGAGCTCCTCTGA-CACCGGAGGCAGCAACCATGAGCAGCACGCCATGGG--CAAGGA 717
consensus_12358#1 TCTGAATTCGAGCTGAATTGTGGCAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACAC 383
consensus_12358#2 CAAGGAGGTCATGACCATCAATGGCCTTGCACAAGATGGCACAGTTCAAGGTTTA--GAA 118
consensus_12358#3 ----------------------------------------------CAAGGTTTACTGAT 14
consensus_12358#0 CAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCA--GAA 775
consensus_12358#1 CGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGA 443
* *
consensus_12358#2 CAGCCATGATCAGTAATTCAGTCCGATGATGATGAACATCCAAAGATCGAGCATTTTGGC 178
consensus_12358#3 GGATGATGAACATCCCGAAGATCGAGCAAT--TCGACGCTGATAGGCGATACGGATCGGC 72
consensus_12358#0 CAGCCATGATCAGTAATTCAGTATGATGATGATGAACATCCGAAGATCGAGCAATTCGAC 835
consensus_12358#1 CCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAA-GGTCGCCGCGCTGGTGCCGG 502
* * ** * *
consensus_12358#2 GCTG--------------------ATGTTTACAACCACTGATGGGTTTTTGGATTTGAGC 218
consensus_12358#3 G-----------------------ATGTTTACAACCATTGATGGGTTCTTGGATTTGAGC 109
consensus_12358#0 GCTGATAGGCGATACGGATCGGCGATGTTTACAACCATTGATGGGTTCTTGGATTTGAGC 895
consensus_12358#1 GCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGAC-GACGATCTCGTCGGCGGCGGC 561
* * * ** ** * ** * * * * **
consensus_12358#2 AATG--------GCGCGGGTTGGTGCCGCCCCCATGTTC-ATGACCTTGGTAGCTCAAAG 269
consensus_12358#3 AATG--------GCGCGAGTCGGTGCCGCCACCATGATC-ATGACCATGGTAGCTCAAAG 160
consensus_12358#0 AATG--------GCGCGAGTCGGTGCCGCCACCATGATC-ATGACCATGGTAGCTCAAAG 946
consensus_12358#1 GATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCG 621
*** **** * ** ****** ** * * * * * *
consensus_12358#2 GATTCATGATCTTTGTGAGGGGGAATTGCTCATTGTGAGGGGGGAATTGTTGACAGCAAT 329
consensus_12358#3 GATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGG-AATTGCTGACAGCAAT 219
consensus_12358#0 GATTCATGATCATTGTGAGGGGGAATTGCTCATTGTGAGGGGG-AATTGCTGACAGCAAT 1005
consensus_12358#1 GCGTCGTCGTCGTCGTCCTGCGGC-TCGCTCGTCGACTTCATGTCATCGGCGGCGGCGGC 680
* ** * ** * ** * ** * **** * * * ** * * * **
consensus_12358#2 TTCGATCAGCCGCTGCTCCCTTTTAG--AGGTTACCTTGCCGACCCATTGCAAGAGCAA- 386
consensus_12358#3 CTCGATCAGCCGCTGCTCACTTTCAG--AGGTTACCTTGCCGACACATTGCAAGAGCAA- 276
consensus_12358#0 CTCGATCAGCCGCTGCTCACTTTCAG--AGGTTACCTTGCCGACACATTGCAAGAGCAA- 1062
consensus_12358#1 GGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTT 740
* * ***** * * * * * * **** * * *
consensus_12358#2 CAAAGTCTGTACTGTTGAACAATGCTACTGACGTTTGACATGCCCTTTTGACA----AAG 442
consensus_12358#3 CAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACA----AAG 332
consensus_12358#0 CAAAGTCTGTACTGTTGAACAATGCTACTGACGTTCGACATGCCCTTCTGACA----AAG 1118
consensus_12358#1 CCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGG 800
* *** * * *** * * * ** * * ***** * *
consensus_12358#2 TA--AATTTCCAGTTTCAAGAT-TGGATTTGCTCGTCTTTTTTTTAGAGATT--TAGCAT 497
consensus_12358#3 TA--AATCTACAGTTTCAAGAT-TGGATTTGCTCGTCTTTTTTTCAGAGATT--TAGCAT 387
consensus_12358#0 TA--AATCTACAGTTTCAAGAT-TGGATTTGCTCGTCTTTTTTTCAGAGATT--TAGCAT 1173
consensus_12358#1 CAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCAT 860
* ** ** ** * *** * * * * ** * ****
consensus_12358#2 T--------TTTTGTAGGGAAGAAACTGAAAAAGATGTGGT--ATAACGTTTTGTGGCTG 547
consensus_12358#3 A--------TATTGTAGGGAAGAAACTGAAA--GATGTAGT--ATAACGTTTTGTGACTG 435
consensus_12358#0 A--------TATTGTAGGGAAGAAACTGAAA--GATGTAGT--ATAACGTTTTGTGACTG 1221
consensus_12358#1 TGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGATCAGTAATTCAGTATGATGA 920
* ** * ** * * * *** * **
consensus_12358#2 TGCTATGAATTTGAAGAAGATAGGGTCCCGTTTAGGTAGGCCAAGTGCAAT-----TTCT 602
consensus_12358#3 TGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAAT-----TACT 490
consensus_12358#0 TGCTATGAATCTGAAGAAGATAGGGTACAGTTTAGGTAGGCCAAGTGCAAT-----TACT 1276
consensus_12358#1 TGATAAACATCCGAAGATCGAGCAATTCGACGCTGATAGGCGATACGGATCGGCGATGTT 980
** ** ** ***** * * * ***** * * * * *
consensus_12358#2 TCCAATTTTCATTGGCTTCCGGTTGGTTTAAAAAAAAAAAAAA----------------- 645
consensus_12358#3 TCCAATCTTCATTGGCTTC-AGTTAGTTACATGCATGGCTGTATCTAGCATTCTC----T 545
consensus_12358#0 TCCAATCTTCATTGGCTTC-AGTTAGTTACATGCATGGCTGTATCTAGCATTCTC----T 1331
consensus_12358#1 TACAACCATTGATGGGTTC--TTGGATTTGAGCAATGGCGCGAGTCGGTGCCGCCACCAT 1038
* *** * *** *** * ** * * *
consensus_12358#2 AAAAAAAA--AAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAA----------------- 686
consensus_12358#3 GACCATAA--ATCAGTAGTGCAAGAAAGTGCAATCAGGAAAAA----------------- 586
consensus_12358#0 GACCATAA--ATCAGTAGTGCAAGAAAGTGCAATCAGGAAAGATGCATATGTTTTTCATT 1389
consensus_12358#1 GATCATGACCATGGTAGCTCAAAGGATTCATGATCATTGTGAGGGGGAATTGCTCATTGT 1098
* * * * ** * * *
consensus_12358#2 -----------------------------------
consensus_12358#3 -----------------------------------
consensus_12358#0 CATATTTGGTACGTCTCTTATTCAAAGAAGAAATA 1424
consensus_12358#1 GAGGG------------------------------ 1103
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||