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Oryza sativa
cluster # 12376 cluster # 12376       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12376#0 length = 1850 sequences # 9  
consensus_12376#1 length = 270 sequences # 1  

consensusID : consensus_12376#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1850
fasta sequence
                              [CGACAAGAATCTCAAGCCACCCTCCCCTCGCCGCTGCCTCTTCCCTCCACCCGAGGGG-AAAAGCGAGCAAGCAAACTGTGCGGAGCAAGCACGGCAAGGCAAGGCAAGGTGACCCACCGCCATTGGCTTCTTCCGTTTTATCCAGGAGAAAGGAGGAGGAGTACTGGGAGATAGGAGCAATGGCGGAGTCGACGGCGGCGACGGCGCCACCGGGGGACGAGCCGGAGGCGAAGG-GGAGGAGCAACTCCATCCTGCTCCCCATCCTCGGGATCCTTCTCGTCTACCTGCTGTACCGGTACCTCCGGCCGCGCCTCCGCGGCCTGCGGCTCGACCGCCTCACGTCCCGCCTCCCGGCGTGCCTCCGCCGGAGCAGGACGGCCAACACCATG-CTCCCCTACTTCGCGCCGATCGCCGACCGCCTCGGCGCGCTGCAGCCGTACCTGGCCCCCATCGCCGACCGCCTCGGGGTGGGCGCGCAGGGCGGCGTCGGCGCAGGGGCGTACGGCAGGGCGGACGCGCTCGTCAAGTTCCCCGGCGGGGAGGCGCTCTCCGTCGCCGCCATCCTCGAGGCGCCGGGGGAGGTGGTGGCCAAG-TCGTCGCACAGCACCCTGTACCGCGCCGCGATGCGCTCCGGGGAGGCCGCCGTGCTGCTCCGGTTCGTGCGGCCCGCGTGCGCGCTCACCTCCGACGAGGCCTCCGCCGCCGCGCGCCGGATCGGCGCGGTCAGCCACCCGAACCTCGTGCCGCTCCGCGCGTTCTACGTCGGGCCGAGGGGGGAGAAGCTGCTCGTGCACCCCTTCTACGCCGCCGGCTCGCTCCGGCGATTCTTGCAAGAGGGAATTGTTGATTCACAAAGATGGAATATAATTTGCAAGCTCTCTATCAGTATTGTCAAGGGACTGGATTACCTGCATACAGGGTTGGAGAAACCGATAATTCACGGGAACATCAAGACGAACAACATTCTGCTCGATGCTAATTACGAGTGCAAGATATCAGACTTTGGCCTCTACCTTCTGCTGAATCCTGCTGGTGCCCAGGAGATGCTTGAAACTTCAGCAGCACAGGGTTACAAGGCACCTGAGCTGATCAAGATGAGAGATGCCACTAGAGAGACTGATATCTACAGCTTGGGAGTAGTTCTGCTTGAGATGCTTGCCCAGAAGGAATCAGCAAAGGATAACACGCCAAACCCTCGCGACATCCTATTGCCTGTCTCGTTCAAAAATTTGGTTCTTGAGAGGAAGATTTCTGATGCATTCAGCTCCGATCTTGTCAGGCAGAG-CAAGAAGTCAGGGAAGGAAAAGAATTTGAATGCTTTCTTCGAGTTGGCAA-CAGCTTGC-TGTAGCCCTTCACCATCATTGAGACCTAACACAAAGTTTATACTCAAAAAGCTCGAAGAGATTGCAAAATAAATTAAACTGGGTAGTTTACCGGCTTGCTATTTAATCGGCATTGCATTATAGCAGCATATACAGCAATGACGAGTACTGAGGCATTTCAGCCTGGCCAAGGCTAGAAACCTGCTGAATTTGTGCTGGCCAGGGAACTGAATAGCCTTGACATGAACTCAGAGTAACATACATGCTGGAGGGGTGCTTCAGATGCAGGATCACTGTGTTT-TTCTTGTGCATTACCTGGAACCGA-AAAAAAAAATGTAGAACTGCTGTTCATAGGCCAGTGCCCCTGAAGAACTGTATAACACACTGTTAGTGAAATGTATATGTTGTACTTTTAATGCATCGAAACACTCCATGTGAACTGGAATGTTCCTCATCCAGAC-GCCATGAAACTAAAGTTACTGTAGAGATTACGATGCT--CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C26488               [CGACAAGAATCTCAAGCCACCCTCCCCTCGCCGCTGCCTCTTCCCTCCACCCGAGGGGAAAAAGCGAGCAAGCAAACTGTGCGGAG AAGCACGGCAAGGCAAGGCAAGGTGACCCACCGCCATTGGNTTCTTCCGTTTTATCCAGGAGAAAGGAGGAGGAGTACTGGGAGATAGGAGCAATGGCGGAGTCGACGGCGGCGACGGCGCCACCGGGGGACGAGCCGGANG TANGGTGGAGGAGCAACTCCATCCTGCTCCCCATCCTCGGGATCCTTCTNGTCTACCTGCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK060657             [                      TCCCCTCGCCGCTGCCTCTTCCCTCCACCCGAGGGG AAAAGCGAGCAAGCAAACTGTGCGGAGCAAGCACGGCAAGGCAAGGCAAGGTGACCCACCGCCATTGGCTTCTTCCGTTTTATCCAGGAGAAAGGAGGAGGAGTACTGGGAGATAGGAGCAATGGCGGAGTCGACGGCGGCGACGGCGCCACCGGGGGACGAGCCGGAGGCGAAGG GGAGGAGCAACTCCATCCTGCTCCCCATCCTCGGGATCCTTCTCGTCTACCTGCTGTACCGGTACCTCCGGCCGCGCCTCCGCGGCCTGCGGCTCGACCGCCTCACGTCCCGCCTCCCGGCGTGCCTCCGCCGGAGCAGGACGGCCAACACCATG CTCCCCTACTTCGCGCCGATCGCCGACCGCCTCGGCGCGCTGCAGCCGTACCTGGCCCCCATCGCCGACCGCCTCGGGGTGGGCGCGCAGGGCGGCGTCGGCGCAGGGGCGTACGGCAGGGCGGACGCGCTCGTCAAGTTCCCCGGCGGGGAGGCGCTCTCCGTCGCCGCCATCCTCGAGGCGCCGGGGGAGGTGGTGGCCAAG TCGTCGCACAGCACCCTGTACCGCGCCGCGATGCGCTCCGGGGAGGCCGCCGTGCTGCTCCGGTTCGTGCGGCCCGCGTGCGCGCTCACCTCCGACGAGGCCTCCGCCGCCGCGCGCCGGATCGGCGCGGTCAGCCACCCGAACCTCGTGCCGCTCCGCGCGTTCTACGTCGGGCCGAGGGGGGAGAAGCTGCTCGTGCACCCCTTCTACGCCGCCGGCTCGCTCCGGCGATTCTTGCAAGAGGGAATTGTTGATTCACAAAGATGGAATATAATTTGCAAGCTCTCTATCAGTATTGTCAAGGGACTGGATTACCTGCATACAGGGTTGGAGAAACCGATAATTCACGGGAACATCAAGACGAACAGCATTCTGCTCGATGCTAATTACGAGTGCAAGATATCAGACTTTGGCCTCTACCTTCTGCTGAATCCTGCTGGTGCCCAGGAGATGCTTGAAACTTCAGCAGCACAGGGTTACAAGGCACCTGAGCTGATCAAGATGAGAGATGCCACTAGAGAGACTGATATCTACAGCTTGGGAGTAGTTCTGCTTGAGATGCTTGCCCAGAAGGAATCAGCAAAGGATAACACGCCAAACCCTCGCGACATCCTATTGCCTGTCTCGTTCAAAAATTTGGTTCTTGAGAGGAAGATTTCTGATGCATTCAGCTCCGATCTTGTCAGGCAGAG CAAGAAGTCAGGGAAGGAAAAGAATTTGAATGCTTTCTTCGAGTTGGCAA CAGCTTGC TGTAGCCCTTCACCATCATTGAGACCTAACACAAAGTTTATACTCAAAAAGCTCGAAGAGATTGCAAAATAAATTAAACTGGGTAGTTTACCGGCTTGCTATTTAATCGGCATTGCATTATAGCGGCATATACAGCAATGACGAGTACTGAGGCATTTCAGCCTGGCCAAGGCTAGAAACCTGCTGAATTTGTGCTGGCCAGGGAACTGAATAGCCTTGACATGAACTCAGAGTAACATACATGCTGGAGGGGTGCTTCAGATGCAGGATCACTGTGTTT TTCTTGTGCATTACCTGGAACCGAGAAAAAAAAATGTAGAACTGCTGTTCATAGGCCAGTGCCCCTGAAGAACTGTATAACACACTGTTAGTGAAATGTATATGTTGTACTTTTAATGCATCGAAACACTCCA                                                                                                  ]
[+] EMBL AU182274             [                                   GCCTCTTCCCTCCACCCGAGGGGAAAAAGCGAGCAAGCAAACTGTGCGGAGCAAGCACGGCAAGGCAAGGCAAGGTGACCCACCGCCATTGGCTTCTTCCGTTTTATCCAGGAGAAAGGAGGAGGAGTACTGGGAGATAGGAGCAATGGCGGAGTCGACGGCGGCGACGGCGCCACCGGGGGACGAGCCGGAGGCGAAGG GGAGGAGCAACTCCATCCTGCTCCCCATCCTCGGGATCCTTCTCGTCTACCTGCTGTACCGGTACCTCCGGCCGCGCCTCCGCGGCCTGCGGCTCGACCGCCTCACGTCCCGCCTCCCGGCGTGCCTCCGCCGGAGCAGGACGGCCAACACCATG CTCCCCTACTTCGCGCCGATCGCCGACCGCCTCGGCGCGCTGCAGCCGTACCTGGCCCCCATCGCCGACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK101947             [                                                                                                                  CCACCGCCATTGGCTTCTTCCGTTTTATCCAGGAGAAAGGAGGAGGAGTACTGGGAGATAGGAGCAATGGCGGAGTCGACGGCGGCGACGGCGCCACCGGGGGACGAGCCGGAGGCGAAGG GGAGGAGCAACTCCATCCTGCTCCCCATCCTCGGGATCCTTCTCGTCTACCTGCTGTACCGGTACCTCCGGCCGCGCCTCCGCGGCCTGCGGCTCGACCGCCTCACGTCCCGCCTCCCGGCGTGCCTCCGCCGGAGCAGGACGGCCAACACCATG CTCCCCTACTTCGCGCCGATCGCCGACCGCCTCGGCGCGCTGCAGCCGTACCTGGCCCCCATCGCCGACCGCCTCGGGGTGGGCGCGCAGGGCGGCGTCGGCGCAGGGGCGTACGGCAGGGCGGACGCGCTCGTCAAGTTCCCCGGCGGGGAGGCGCTCTCCGTCGCCGCCATCCTCGAGGCGCCGGGGGAGGTGGTGGCCAAG TCGTCGCACAGCACCCTGTACCGCGCCGCGATGCGCTCCGGGGAGGCCGCCGTGCTGCTCCGGTTCGTGCGGCCCGCGTGCGCGCTCACCTCCGACGAGGCCTCCGCCGCCGCGCGCCGGATCGGCGCGGTCAGCCACCCGAACCTCGTGCCGCTCCGCGCGTTCTACGTCGGGCCGAGGGGGGAGAAGCTGCTCGTGCACCCCTTCTACGCCGCCGGCTCGCTCCGGCGATTCTTGCAAGAGGGAATTGTTGATTCACAAAGATGGAATATAATTTGCAAGCTCTCTATCAGTATTGTCAAGGGACTGGATTACCTGCATACAGGGTTGGAGAAACCGATAATTCACGGGAACATCAAGACGAACAACATTCTGCTCGATGCTAATTACGAGTGCAAGATATCAGACTTTGGCCTCTACCTTCTGCTGAATCCTGCTGGTGCCCAGGAGATGCTTGAAACTTCAGCAGCACAGGGTTACAAGGCACCTGAGCTGATCAAGATGAGAGATGCCACTAGAGAGACTGATATCTACAGCTTGGGAGTAGTTCTGCTTGAGATGCTTGCCCAGAAGGAATCAGCAAAGGATAACACGCCAAACCCTCGCGACATCCTATTGCCTGTCTCGTTCAAAAATTTGGTTCTTGAGAGGAAGATTTCTGATGCATTCAGCTCCGATCTTGTCAGGCAGAG CAAGAAGTCAGGGAAGGAAAAGAATTTGAATGCTTTCTTCGAGTTGGCAA CAGCTTGC TGTAGCCCTTCACCATCATTGAGACCTAACACAAAGTTTATACTCAAAAAGCTCGAAGAGATTGCAAAATAAATTAAACTGGGTAGTTTACCGGCTTGCTATTTAATCGGCATTGCATTATAGCAGCATATACAGCAATGACGAGTACTGAGGCATTTCAGCCTGGCCAAGGCTAGAAACCTGCTGAATTTGTGCTGGCCAGGGAACTGAATAGCCTTGACATGAACTCAGAGTAACATACATGCTGGAGGGGTGCTTCAGATGCAGGATCACTGTGTTT TTCTTGTGCATTACCTGGAACCGA AAAAAAAAATGTAGAACTGCTGTTCATAGGCCAGTGCCCCTGAAGAACTGTATAACACACTGTTAGTGAAATGTATATGTTGTACTTTTAATGCATCGAAACACTCCATGTGAACTGGAATGTTCCTCATCCAGAC GCCATGAAACTA                                                         ]
[+] EMBL AU056887             [                                                                                                                                                                                       gngnAGTCGACGGCGGCGACGGCGCCACCGGGGGACNAGCCGGA GNANAGG GGAGGAGCAACTCCATCCTGCTCCCCATCCTCGGGATCCTTCTCGTCTACCTGCTGTACCGGTACCTCCGGCCGCGCCTCCGCGGCCTGCGGCTCGACCGCCTCACGTCCCGCCTCCCGGCGTGCCTCCGCCGGAGCAGGACGGCCAACACCATGACTCCCCTACTTCGCGCCGATCGCCGACCGCCTCGGCGCGCTGCAGCCGTACCTGGCCCCCATCGCCGACCGCCTCGGGGTGGGCGCGCAGGGCGGCGTCGGCGCAGGGGCGTACGGCAGGGCGGACGCGCTCGTCAAGTTCCCCGGCGGGGAGGCGCTCTCCGTCGCCGCCATCCTCGAGGCGCCGGGGGAGGTGGTGGCCAAGTTCGTCGCACAGNACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA998750             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCAGTATTGTCAAGGGACTGGATTACCTGCATACAGGGTTGGAGAAACCGATAATTCACGGGAACATCAAGACGAACAACATTCTGCTCGATGCTAATTACGAGTGCAAGATATCAGACTTTGGCCTCTACCTTCTGCTGAATCCTGCTGGTGCCCAGGAGATGCTTGAAACTTCATCAGCACAGGGTTACAAGGCACCTGAGCTGATCAAGATGAGAGATGCCACTAGAGAGACTGATATCTACAGCTTGGGAGTAGTTCTGCTTGAGATGCTTGCCCAGAAGGAATCAGCAAAGGATAACACGCCAAACCCTCGCGACATCCTATTGCCTGTCTCGTTCAAAAATTTGGTTCTTGAGAGGAAGATTTCTGATGCATTCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BI806633             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCTCCGATCGTGTCA GCAGAGCCTAGAAGTCAGGGAAGGAAAAGAATTTGAATGCTT  TTCGAGTTGGCAACCAGCTTGCTTGTAGCCCTTCACCATCATTGAGACCTAACACAAA TTTATACTC  AAAGCTCGAAGAGATT CTAAATAAATTAAACTGGGTAGTTTACCGGCTTGCTATTTAATCGGCATTGCATTATA CAGCATATACAGCAATGACGAGTACTGAGGCATTTCAGCCT GCCAAGGCTAGAAACCTGCTGAATTTGTGCTGGCCAGGGAACTGAATAGCCTTGACATGAACTCAGAGTAACATACATGCTGGAGGGGTGCTTCAGATGCAGGATCACTGTGTTTCNTCTTGTGCATTACCTGGAACCGA AAAAAAAAATGTAGAACTGCTGTTCATAGGCCAGTGCCCCTGAAGAACTGTATAACACACTGTTAGTGAAATGTATATGTTGTACTTTTAATGCATCGAAACACTCCATGTGAACTGGAATGTTCCTCATCCAaaa aa                                                                   ]
[+] EMBL AU173931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TATACTCAAAAAGCTCGAAGAGATTGCAAAATAAATTAAACTGGGTAGTTTACCGGCTTGCTATTTAATCGGCATTGCATTATAGCAGCATATACAGCAATGACGAGTACTGAGGCATTTCAGCCTGGCCAAGGCTAGAAACCTGCTGAATTTGTGCTGGCCAGGGAACTGAATAGCCTTGACATGAACTCAGAGTAACATACATGCTGGAGGGGTGCTTCAGATGCAGGATCACTGTGTTT TTCTTGTGCATTACCTGGAACCGA AAAAAAAAATGTAGAACTGCTGTTCATAGGCCAGTGCCCCTGAAGAACTGTATAACACACTGTTAGTGAAATGTATATGTTGTACTTTTAATGCATCGAAACACTCCATGTGAACTGGAATGTTCCTCATCCAGAC GCCATGAAACTAAAGTTACTGTAGAGATTACGATGCT  CAAAAAA                       ]
[+] EMBL AU182275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTGGCCAGGGAACTGAATAGCCTTGACATGAACTCAGAGTAACATACATGCTGGAGGGGTGCTTCANATGCAGGATCNCTGTGTTT TTNTTGTGCATTACCTGGAACCGA AAAAAAAAATGTAGAACTGCTGTTCATAGGCCAGTGCCCCTGAAGAACTGTATAACNCNCTGTTAGTGAAATGTATATGTTGTACTTTTAATGCATCGAAACNCTCCATGTGAACTGGAATGTTCCTCATCCAGACGGCCATGAAACTAAAGTTNCTGTAGAGATTACGATGCTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12376#0 CGACAAGAATCTCAAGCCACCCTCCCCTCGCCGCTGCCTCTTCCCTCCACCCGAGGGGAA AAGCGAGCAAGCAAACTGTGCGGAGCAAGCACGGCAAGGCAAGGCAAGGTGACCCACCGC CATTGGCTTCTTCCGTTTTATCCAGGAGAAAGGAGGAGGAGTACTGGGAGATAGGAGCAA TGGCGGAGTCGACGGCGGCGACGGCGCCACCGGGGGACGAGCCGGAGGCGAAGGGGAGGA GCAACTCCATCCTGCTCCCCATCCTCGGGATCCTTCTCGTCTACCTGCTGTACCGGTACC TCCGGCCGCGCCTCCGCGGCCTGCGGCTCGACCGCCTCACGTCCCGCCTCCCGGCGTGCC TCCGCCGGAGCAGGACGGCCAACACCATGCTCCCCTACTTCGCGCCGATCGCCGACCGCC TCGGCGCGCTGCAGCCGTACCTGGCCCCCATCGCCGACCGCCTCGGGGTGGGCGCGCAGG GCGGCGTCGGCGCAGGGGCGTACGGCAGGGCGGACGCGCTCGTCAAGTTCCCCGGCGGGG AGGCGCTCTCCGTCGCCGCCATCCTCGAGGCGCCGGGGGAGGTGGTGGCCAAGTCGTCGC ACAGCACCCTGTACCGCGCCGCGATGCGCTCCGGGGAGGCCGCCGTGCTGCTCCGGTTCG TGCGGCCCGCGTGCGCGCTCACCTCCGACGAGGCCTCCGCCGCCGCGCGCCGGATCGGCG CGGTCAGCCACCCGAACCTCGTGCCGCTCCGCGCGTTCTACGTCGGGCCGAGGGGGGAGA AGCTGCTCGTGCACCCCTTCTACGCCGCCGGCTCGCTCCGGCGATTCTTGCAAGAGGGAA TTGTTGATTCACAAAGATGGAATATAATTTGCAAGCTCTCTATCAGTATTGTCAAGGGAC TGGATTACCTGCATACAGGGTTGGAGAAACCGATAATTCACGGGAACATCAAGACGAACA ACATTCTGCTCGATGCTAATTACGAGTGCAAGATATCAGACTTTGGCCTCTACCTTCTGC TGAATCCTGCTGGTGCCCAGGAGATGCTTGAAACTTCAGCAGCACAGGGTTACAAGGCAC CTGAGCTGATCAAGATGAGAGATGCCACTAGAGAGACTGATATCTACAGCTTGGGAGTAG TTCTGCTTGAGATGCTTGCCCAGAAGGAATCAGCAAAGGATAACACGCCAAACCCTCGCG ACATCCTATTGCCTGTCTCGTTCAAAAATTTGGTTCTTGAGAGGAAGATTTCTGATGCAT TCAGCTCCGATCTTGTCAGGCAGAGCAAGAAGTCAGGGAAGGAAAAGAATTTGAATGCTT TCTTCGAGTTGGCAACAGCTTGCTGTAGCCCTTCACCATCATTGAGACCTAACACAAAGT TTATACTCAAAAAGCTCGAAGAGATTGCAAAATAAATTAAACTGGGTAGTTTACCGGCTT GCTATTTAATCGGCATTGCATTATAGCAGCATATACAGCAATGACGAGTACTGAGGCATT TCAGCCTGGCCAAGGCTAGAAACCTGCTGAATTTGTGCTGGCCAGGGAACTGAATAGCCT TGACATGAACTCAGAGTAACATACATGCTGGAGGGGTGCTTCAGATGCAGGATCACTGTG TTTTTCTTGTGCATTACCTGGAACCGAAAAAAAAAATGTAGAACTGCTGTTCATAGGCCA GTGCCCCTGAAGAACTGTATAACACACTGTTAGTGAAATGTATATGTTGTACTTTTAATG CATCGAAACACTCCATGTGAACTGGAATGTTCCTCATCCAGACGCCATGAAACTAAAGTT ACTGTAGAGATTACGATGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12376#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 270
fasta sequence
                              [AGACGACAAGAATCTCAAGCCACCCTCCCCTCGCCGCTGCCTCTTCCCTCCACCCGAGGGGAAAAAGCGAGCAAGCAAACTGTGCGGACAAGCACGGCAAGGCAAGGCAAGGTGACCCACCGCCATTNGNTTCTTCCGTTTTATCCAGGAGAAAGGAGGANGAGTACTGGGAGATAGGAGCAATGGCGGAGTNGACGNCGGCGACGGCNGCAACNGGGGGGACGAGCNGGANNANATGGGGAGGANAAATTCCATCTNGNTCCCCATCCT]

[+] EMBL C74398               [AGACGACAAGAATCTCAAGCCACCCTCCCCTCGCCGCTGCCTCTTCCCTCCACCCGAGGGGAAAAAGCGAGCAAGCAAACTGTGCGGACAAGCACGGCAAGGCAAGGCAAGGTGACCCACCGCCATTNGNTTCTTCCGTTTTATCCAGGAGAAAGGAGGANGAGTACTGGGAGATAGGAGCAATGGCGGAGTNGACGNCGGCGACGGCNGCAACNGGGGGGACGAGCNGGANNANATGGGGAGGANAAATTCCATCTNGNTCCCCATCCT]


>consensus_12376#1 AGACGACAAGAATCTCAAGCCACCCTCCCCTCGCCGCTGCCTCTTCCCTCCACCCGAGGG GAAAAAGCGAGCAAGCAAACTGTGCGGACAAGCACGGCAAGGCAAGGCAAGGTGACCCAC CGCCATTNGNTTCTTCCGTTTTATCCAGGAGAAAGGAGGANGAGTACTGGGAGATAGGAG CAATGGCGGAGTNGACGNCGGCGACGGCNGCAACNGGGGGGACGAGCNGGANNANATGGG GAGGANAAATTCCATCTNGNTCCCCATCCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12376#0      ---CGACAAGAATCTCAAGCCACCCTCCCCTCGCCGCTGCCTCTTCCCTCCACCCGAGGG 57
consensus_12376#1      AGACGACAAGAATCTCAAGCCACCCTCCCCTCGCCGCTGCCTCTTCCCTCCACCCGAGGG 60
                          *********************************************************

consensus_12376#0      GAAAA-GCGAGCAAGCAAACTGTGCGGAGCAAGCACGGCAAGGCAAGGCAAGGTGACCCA 116
consensus_12376#1      GAAAAAGCGAGCAAGCAAACTGTGCGGA-CAAGCACGGCAAGGCAAGGCAAGGTGACCCA 119
                       ***** ********************** *******************************

consensus_12376#0      CCGCCATTGGCTTCTTCCGTTTTATCCAGGAGAAAGGAGGAGGAGTACTGGGAGATAGGA 176
consensus_12376#1      CCGCCATTNGNTTCTTCCGTTTTATCCAGGAGAAAGGAGGANGAGTACTGGGAGATAGGA 179
                       ******** * ****************************** ******************

consensus_12376#0      GCAATGGCGGAGTCGACGGCGGCGACGGCGCCACCGGGGG--ACGAGCCGGAGGCGAAGG 234
consensus_12376#1      GCAATGGCGGAGTNGACGNCGGCGACGGCNGCAACNGGGGGGACGAGCNGGANNANATGG 239
                       ************* **** **********  ** * ****  ****** ***    * **

consensus_12376#0      GGAGGAGCAACTCCATCCTGCTCCCCATCCTCGGGATCCTTCTCGTCTACCTGCTGTACC 294
consensus_12376#1      GGAGGANAAATTCCATCTNGNTCCCCATCCT----------------------------- 270
                       ******  ** ******  * **********                             

consensus_12376#0      GGTACCTCCGGCCGCGCCTCCGCGGCCTGCGGCTCGACCGCCTCACGTCCCGCCTCCCGG 354
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      CGTGCCTCCGCCGGAGCAGGACGGCCAACACCATGCTCCCCTACTTCGCGCCGATCGCCG 414
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      ACCGCCTCGGCGCGCTGCAGCCGTACCTGGCCCCCATCGCCGACCGCCTCGGGGTGGGCG 474
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      CGCAGGGCGGCGTCGGCGCAGGGGCGTACGGCAGGGCGGACGCGCTCGTCAAGTTCCCCG 534
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      GCGGGGAGGCGCTCTCCGTCGCCGCCATCCTCGAGGCGCCGGGGGAGGTGGTGGCCAAGT 594
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      CGTCGCACAGCACCCTGTACCGCGCCGCGATGCGCTCCGGGGAGGCCGCCGTGCTGCTCC 654
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      GGTTCGTGCGGCCCGCGTGCGCGCTCACCTCCGACGAGGCCTCCGCCGCCGCGCGCCGGA 714
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      TCGGCGCGGTCAGCCACCCGAACCTCGTGCCGCTCCGCGCGTTCTACGTCGGGCCGAGGG 774
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      GGGAGAAGCTGCTCGTGCACCCCTTCTACGCCGCCGGCTCGCTCCGGCGATTCTTGCAAG 834
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      AGGGAATTGTTGATTCACAAAGATGGAATATAATTTGCAAGCTCTCTATCAGTATTGTCA 894
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      AGGGACTGGATTACCTGCATACAGGGTTGGAGAAACCGATAATTCACGGGAACATCAAGA 954
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      CGAACAACATTCTGCTCGATGCTAATTACGAGTGCAAGATATCAGACTTTGGCCTCTACC 1014
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      TTCTGCTGAATCCTGCTGGTGCCCAGGAGATGCTTGAAACTTCAGCAGCACAGGGTTACA 1074
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      AGGCACCTGAGCTGATCAAGATGAGAGATGCCACTAGAGAGACTGATATCTACAGCTTGG 1134
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      GAGTAGTTCTGCTTGAGATGCTTGCCCAGAAGGAATCAGCAAAGGATAACACGCCAAACC 1194
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      CTCGCGACATCCTATTGCCTGTCTCGTTCAAAAATTTGGTTCTTGAGAGGAAGATTTCTG 1254
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      ATGCATTCAGCTCCGATCTTGTCAGGCAGAGCAAGAAGTCAGGGAAGGAAAAGAATTTGA 1314
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      ATGCTTTCTTCGAGTTGGCAACAGCTTGCTGTAGCCCTTCACCATCATTGAGACCTAACA 1374
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      CAAAGTTTATACTCAAAAAGCTCGAAGAGATTGCAAAATAAATTAAACTGGGTAGTTTAC 1434
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      CGGCTTGCTATTTAATCGGCATTGCATTATAGCAGCATATACAGCAATGACGAGTACTGA 1494
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      GGCATTTCAGCCTGGCCAAGGCTAGAAACCTGCTGAATTTGTGCTGGCCAGGGAACTGAA 1554
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      TAGCCTTGACATGAACTCAGAGTAACATACATGCTGGAGGGGTGCTTCAGATGCAGGATC 1614
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      ACTGTGTTTTTCTTGTGCATTACCTGGAACCGAAAAAAAAAATGTAGAACTGCTGTTCAT 1674
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      AGGCCAGTGCCCCTGAAGAACTGTATAACACACTGTTAGTGAAATGTATATGTTGTACTT 1734
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      TTAATGCATCGAAACACTCCATGTGAACTGGAATGTTCCTCATCCAGACGCCATGAAACT 1794
consensus_12376#1      ------------------------------------------------------------
                                                                                   

consensus_12376#0      AAAGTTACTGTAGAGATTACGATGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1850
consensus_12376#1      --------------------------------------------------------
                                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)