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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12386#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2164 fasta sequence
[CCATCGCGTGCTTGTCCCTCCCATTCCTCGCCGCCACCGCCGCCGCCGCGCCGAAACCCTAGGGCGGCAGCGTAGGGTTCCCCTCCCCCCCCCTCCTCCGCCCCGATGACGCCGGTGCAGGCGGGGGCGGCGCCCGCGTCGCCGTCGGCGGCGGCGGCGCTCGGGTTCCTCCTCCCGACCTGCTGGGAGATCGAGGTCACCTGCGCCGCCGCGATGATCCTCGTCGCGCTCTACGCCGCGTACGAGCTGCTCGCCCCGCGCCCCGCGTCGGCGGCTGGGGGATCCTCCGCCGCCGGGGACGACCTCCTCCTCGTGCGGGACCTCGACGGCGCCGACAAGTACAAGGGTGGCTCGAGTGGGCCCTCGGCGTACGTGGTGAAGCTAGAGTTGTTGGCTGCGAAGAATTTGATTGCGGCAAACTTAAATGGGACCTCGGACCCCTACGCATTGATCACTTGCGGCGAAGAGAAGCGTTTCAGTTCCATGGTTCCTGGCTCAAGAAACCCAATGTGGGGAGAGGAATTCAATTTTTTTGTTGACAGTCTTCCTGTAAAGATAAATGTGACAATATATGACTGGGACATTGTATGGAAAAGTACTGTTCTTGGTTCTGTTATTGTTCCAGTTGAATCCGAGGGACAGAGTGGACCAGTTTGGTATACGCTTGATAGTACATCAGGCCAGGTGTGCCTACATATTAAGGCAATCAAGGTCCATGAGAGTTCATCGAGGGCTCTAAATAGCTCTGCTGAGGCTGGTGCTCGTAGAAGAATTTCCTTGGATAAACAAGGACCCACTGTAGTTCATCAAAAACCAAGTCATTTGCAGACGATATTTGGACTTCCTCCAGATGAGGTTGTTGAACATAGTTATTCATGTGCACTTGAGAGGTCATTTCTGTATCACGGGCGCATGTATGTCTCTTCATGGCACATTTGCTTCCATTCAAACGTCTTCTCTAAGCAGATCAAGGTTATGCTTCCGTTGAGGGATATTGATGAGATAAGAAGAAGCCAGCATGCAGTTATTAATCCAGCAATCACGATATTTCTTCGAATGGGAGCTGGAGGACATGGGGTTCCTCCCTTAGGAAGTCCCGATGGAAGAGTCAGATATAAATTTGCATCATTTTGGAATAGAAACCATACATTTAGAGCATTGCAACGAGCTGTCAAGAACTTCCATACAATGATAGAGGCTGAGAAACAGGAACGTGCTCAATCTGCATTACGTGCACACAGTAGCTCAAGAAAAAGTAGCATGAAGGAGATAAATGTTCCAGAAGATTGTGCTGATTTAACAGGCCAATTACAACCTTTTGTCAAAGAGGAAGTTCTAGTCACTGTATTCAATGGATCTTTTCCATGTACTGCAGAGGAGTTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGAAAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTACAGCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGAAGGAAGTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGACAATG---GTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACACCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGATGACATCTACCACCCGTTGATAGTAGTTTGTTGAAGTGTTATAGCAGAAGAACAGGTGGACCTGTAATTATAATCCACATGTAATAGGGTTTAGCCGGAAAAAGGGGGTGCTTACAAGATCTAACAGTGTATAAATTGTCTATACATTTTGGCTAATGTATATTTGAAAACGCACCTTAAGAAAAAAA]
[+] EMBL CB671117 [CCATCGCGTGCTTGTCCCTCCCATTCCTCGCCGCCACCGCCGCCGCCGCGCCGAAACCCTAGGGCGGCAGCGTAGGGTTCCCCTCCCCCCCCCTCCTCCGCCCCGATGACGCCGGTGCAGGCGGGGGCGGCGCCCGCGTCGCCGTCGGCGGCGGCGGCGCTCGGGTTCCTCCTCCCGACCTGCTGGGAGATCGAGGTCACCTGCGCCGCCGCGATGATCCTCGTCGCGCTCTACGCCGCGTACGAGCTGCTCGCCCCGCGCCCCGCGTCGGCGGCTGGGGGATCCTCCGCCGCCGGGGACGACCTCCTCCTCGTGCGGGACCTCGACGGCGCCGACAAGTACAAGGGTGGCTCGAGTGGGCCCTCGGCGTACGTGGTGAAGCTAGAGTTGTTGGCTGCGAAGAATTTGATTGCGGCAAACTTAAATGGGACCTCGGACCCCTACGCATTGATCACTTGCGGCGAAGAGAAGCGTTTCAGTTCCATGGTTCCTGGCTCAAGAAACCCAATGTGGGGAGAGGAATTCAATTTTTTTGTTGACAGTCTTCCTGTAAAGATAAATGTGACAATATATGACTGGGACATTGTATGGAAAAGTACTGTTCTTGGTTCTGTTATTGTTCCAGTTGAATCCGAGGGACAGAGTGGACCAGTTTGGTATACGCTTGATAGTACATCAGGCCAGGTGTGCCTACATATTAAGGCAATCAAGGTCCATGAGAGTTCATCGAGGGCTCTAAATAGCTCTGCTGAG ]
[+] EMBL AK067607 [ CTCCCATTCCTCGCCGCCACCGCCGCCGCCGCGCCGAAACCCTAGGGCGGCAGCGTAGGGTTCCCCTCCCCCCCCCTCCTCCGCCCCGATGACGCCGGTGCAGGCGGGGGCGGCGCCCGCGTCGCCGTCGGCGGCGGCGGCGCTCGGGTTCCTCCTCCCGACCTGCTGGGAGATCGAGGTCACCTGCGCCGCCGCGATGATCCTCGTCGCGCTCTACGCCGCGTACGAGCTGCTCGCCCCGCGCCCCGCGTCGGCGGCTGGGGGATCCTCCGCCGCCGGGGACGACCTCCTCCTCGTGCGGGACCTCGACGGCGCCGACAAGTACAAGGGTGGCTCGAGTGGGCCCTCGGCGTACATGGTGAAGCTAGAGTTGTTGGCTGCGAAGAATTTGATTGCGGCAAACTTAAATGGGACCTCGGACCCCTACGCATTGATCACTTGCGGCGAAGAGAAGCGTTTCAGTTCCATGGTTCCTGGCTCAAGAAACCCAATGTGGGGAGAGGAATTCAATTTTTTTGTTGACAGTCTTCCTGTAAAGATAAATGTGACAATATATGACTGGGACATTGTATGGAAAAGTACTGTTCTTGGTTCTGTTATTGTTCCAGTTGAATCCGAGGGACAGAGTGGACCAGTTTGGTATACGCTTGATAGTACATCAGGCCAGGTGTGCCTACATATTAAGGCAATCAAGGTCCATGAGAGTTCATCGAGGGCTCTAAATAGCTCTGCTGAGGCTGGTGCTCGTAGAAGAATTTCCTTGGATAAACAAGGACCCACTGTAGTTCATCAAAAACCAAGTCATTTGCAGACGATATTTGGACTTCCTCCAGATGAGGTTGTTGAACATAGTTATTCATGTGCACTTGAGAGGTCATTTCTGTATCACGGGCGCATGTATGTCTCTTCATGGCACATTTGCTTCCATTCAAACGTCTTCTCTAAGCAGATCAAGGTTATGCTTCCGTTGAGGGATATTGATGAGATAAGAAGAAGCCAGCATGCAGTTATTAATCCAGCAATCACGATATTTCTTCGAATGGGAGCTGGAGGACATGGGGTTCCTCCCTTAGGAAGTCCCGATGGAAGAGTCAGATATAAATTTGCATCATTTTGGAATAGAAACCATACATTTAGAGCATTGCAACGAGCTGTCAAGAACTTCCATACAATGATAGAGGCTGAGAAACAGGAACGTGCTCAATCTGCATTACGTGCACACAGTAGCTCAAGAAAAAGTAGCATGAAGGAGATAAATGTTCCAGAAGATTGTGCTGATTTAACAGGCCAATTACAACCTTTTGTCAAAGAGGAAGTTCTAGTCACTGTATTCAATGGATCTTTTCCATGTACTGCAGAGGAGTTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGAAAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTACAGCAAGTACATGGTGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACGAGAAGGAAGTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAGCCAAGACAATG GTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACACCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGATGACATCTACCACCCGTTGATAGTAGTTTGTTGAAGTGTTATAGCAGAAGAACAGGTGGACCTGTAATTATAATCCACATGTAATAGGGTTTAGCCGGAAAAAGGGGGTGCTTACAAGATCTAACAGTGTATAAATTGTCTATACATTTTGGCTAATGTATATTT ]
[+] EMBL CB657290 [ GCCGCCGCCGCGCCGAAACCCTAGGGCGGCAGCGTAGGGTTCCCCTCCCCCCCCCTCCTCCGCCCCGATGACGCCGGTGCAGGCGGGGGCGGCGCCCGCGTCGCCGTCGGCGGCGGCGGCGCTCGGGTTCCTCCTCCCGACCTGCTGGGAGATCGAGGTCACCTGCGCCGCCGCGATGATCCTCGTCGCGCTCTACGCCGCGTACGAGCTGCTCGCCCCGCGCCCCGCGTCGGCGGCTGGGGGATCCTCCGCCGCCGGGGACGACCTCCTCCTCGTGCGGGACCTCGACGGCGCCGACAAGTACAAGGGTGGCTCGAGTGGGCCCTCGGCGTACGTGGTGAAGCTATAGTTGTTGGCTGCGAAGAATTTGATTGCGGCTAACTTAAATGGGACCTCGGACCCCTACGCATTGATCACTTGCGGCGAAGAGAAGCGTTTCAGTTCCATGGTTCCTGGCTCAAGAAACCCAATGTGGGGAGAGGAATTCAATTTTTGTGTTGACAGGCTTCCTGTAAAGATAAATGTGACAATATATGACTGGGACATTGTATGGAAAAGTACTGATCTTGGTTCTGCTATTGT ]
[+] EMBL AK058746 [ AGAATTTCCTTGGATAAACAAGGACCCACTGTAGTTCATCAAAAACCAAGTCATTTGCAGACGATATTTGGACTTCCTCCAGATGAGGTTGTTGAACATAGTTATTCATGTGCACTTGAGAGGTCATTTCTGTATCACGGGCGCATGTATGTCTCTTCATGGCACATTTGCTTCCATTCAAACGTCTTCTCTAAGCAGATCAAGGTTATGCTTCCGTTGAGGGATATTGATGAGATAAGAAGAAGCCAGCATGCAGTTATTAATCCAGCAATCACGATATTTCTTCGAATGGGAGCTGGAGGACATGGGGTTCCTCCCTTAGGAAGTCCCGATGGAAGAGTCAGATATAAATTTGCATCATTTTGGAATAGAAACCATACATTTAGAGCATTGCAACGAGCTGTCAAGAACTTCCATACAATGATAGAGGCTGAGAAACAGGAACGTGCTCAATCTGCATTACGTGCACACAGTAGCTCAAGAAAAAGTAGCATGAAGGAGATAAATGTTCCAGAAGATTGTGCTGATTTAACAGGCCAATTACAACCTTTTGTCAAAGAGGAAGTTCTAGTCACTGTATTCAATGGATCTTTTCCATGTACTGCAGAGGAGTTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGAAAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTACAGCAAGTACATGATGTTCCATTTGGTTCCTT TTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGAAGGAAGTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGACAATG GTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACACCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGATGACATCTACCACCCGTTGATAGTAGTTTGTTGAAATGTTATAGCAGAAGAACAGGTGGACCTGTAATTATAATCCACATGTAATAGGGTTTAGCCGGAAAAAGGGGGTGCTTACAAGATCTAACAGTGTATAAATTGTCTATACATTTTGGCTAATGTATATTT ]
[+] EMBL CF324002 [ GAGGGATATTGATGAGATAAGAAGAAGCCAGCATGCAGTTATTAATCCAGCAATCACGATATTTCTTCGAATGGGAGCTGGAGGACATGGGGTTCCTCCCTTAGGAAGTCCCGATGGAAGAGTCAGATATAAATTTGCATCATTTTGGAATAGAAACCATACATTTAGAGCATTGCAACGAGCTGTCAAGAACTTCCATACAATGATAGAGGCTGAGAAACAGGAACGTGCTCAATCTGCATTACGTGCACACAGTAGCTCAAGAAAAAGTAGCATGAAGGAGATAAATGTTCCAGAAGATTGTGCTGATTTAACAGGCCAATTACAACCTTTTGTCAAAGAGGAAGTTCTAGTCACTGTATTCAATGGATCTTTTCCATGTACTGCAGAGGAGTTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGAAAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCNCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGA ]
[-] EMBL CB643178 [ ATGATTCAAGTTACATCACGGAATTTCGGACAGCTGGAAAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTACAGCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGAAGGAAGTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGACAATG GTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACACCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGATGACATCTACCACCCGTTGATAGTAGTTTGTTGAAGTGTTATAGCAGAAGAACAGGTGGACCTGTAATTATAATCCACATGTAATAGGGTTTAGCCGGAAAAAGGGGGTGCTTACAAGATCTAACAGTGTATAAATTGTAAGGGCATTTTGGCTAATGTATATTTGAAAACGCACCTTAAGA ]
[+] EMBL BQ906540 [ TTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGAAGGAAGTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGACAATGGTAGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACACCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGATGACATCTACCACCCGTTGATAGTAGTTTGTTGAAGTGTTATAGCAGAAGAACAGGTGGACCTGTAATTATAATCCACATGTAATAGGGTTTAGCCGGAAAAAGGGGGTGCTTACAAGATCTAACAGTGTATAAATTGTCTATACATTTTGGCTAATGTATATTTGAAAACGCA TAAAAAAAAAA]
consensusID : consensus_12386#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 821 fasta sequence
[GCCAATTACAACCTTTTGTCAAAGAGGAAGTTCTAGTCACTGTATTCAATAGGAGTTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGAAAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTACAGCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGAAGGAAGTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGACAATGGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACACCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGATGACATCTACCACCCGTTGATAGTAGTTTGTTGAAGTGTTATAGCAGAAGAACAGGTGGACCTGTAATTATAATCCACATGTAATAGGGTTTAGCCGGAAAAA-GGGGGTGCTTACAAGATCTAACAGTGTATAAATTGTCTATACATTTTGGCTAATGTATATTTGAAAA]
[-] EMBL CB671118 [GCCAATTACAACCTTTTGTCAAAGAGGAAGTTCTAGTCACTGTATTCAATAGGAGTTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGAAAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTACAGCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGAAGGAAGTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGACAATGGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACACCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGATGACATCTACCACCCGTTGATAGTAGTTTGTTGAAGTGTTATAGCAGAAGAACAGGTGGACCTGTAATTATAATCCACATGTAATAGGGTTTAGCCGGAAAAA GGGGGTGCTTACAAGATCTAACAGTGTATAAATTGTCTATACATTTTGGCTAATGTATATTTGAAAA]
[-] EMBL CB657291 [ TGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTTTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTACAGCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTCCACTGTAGATGGTCTGTGAAGACTACCAGTTTTGATTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTCCAAGAAGGAATTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAATTTTTACCCAAGACAATGGTCCCCCTATTGAGCAAGACAACGGCGCTGTGACTGACCAAAAAAATGTGGCCCCGGATAATCCCCCAAATGAGGAATAATTTTTTTTTAAGTTATGTTTTCTCCTGTAGGATGCCATTTACCCCCCGTTGATAGTAGTTTGTTGAAGTGTTATAGCAGAAGAACCGGTGGCCCTGTAATTATAATCCCCA CCAATAGGGTTTAGCCGGAAAAAGGGGGGGGCTTACAGGATATACCACCGTATAAATTGTCTATACATTTTGGTTAAgg ]
consensusID : consensus_12386#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence
[GGTCAGTTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGGTGACAAAACAGATCTGGTATTTTAAACTGTACACCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGACCGAACTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTTTAACCAAGACAATGGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACCCCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGAGCCCCTGCCGCCGGCGACGCGGGCGCCGCCCCCGCCTGCACCGGCGTCATCGGGGCGGAGGAGGGGGGGGGAGGGGAACCCTACGCTGCCGCCCTAGGGTTTCGGCGCGG]
[-] EMBL CB643177 [GGTCAGTTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGGTGACAAAACAGATCTGGTATTTTAAACTGTACACCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAATGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGACCGAACTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTTTAACCAAGACAATGGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACCCCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGAGCCCCTGCCGCCGGCGACGCGGGCGCCGCCCCCGCCTGCACCGGCGTCATCGGGGCGGAGGAGGGGGGGGGAGGGGAACCCTACGCTGCCGCCCTAGGGTTTCGGCGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12386#0 CCATCGCGTGCTTGTCCCTCCCATTCCTCGCCGCCACCGCCGCCGCCGCGCCGAAACCCT 60
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 AGGGCGGCAGCGTAGGGTTCCCCTCCCCCCCCCTCCTCCGCCCCGATGACGCCGGTGCAG 120
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 GCGGGGGCGGCGCCCGCGTCGCCGTCGGCGGCGGCGGCGCTCGGGTTCCTCCTCCCGACC 180
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 TGCTGGGAGATCGAGGTCACCTGCGCCGCCGCGATGATCCTCGTCGCGCTCTACGCCGCG 240
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 TACGAGCTGCTCGCCCCGCGCCCCGCGTCGGCGGCTGGGGGATCCTCCGCCGCCGGGGAC 300
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 GACCTCCTCCTCGTGCGGGACCTCGACGGCGCCGACAAGTACAAGGGTGGCTCGAGTGGG 360
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 CCCTCGGCGTACGTGGTGAAGCTAGAGTTGTTGGCTGCGAAGAATTTGATTGCGGCAAAC 420
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 TTAAATGGGACCTCGGACCCCTACGCATTGATCACTTGCGGCGAAGAGAAGCGTTTCAGT 480
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 TCCATGGTTCCTGGCTCAAGAAACCCAATGTGGGGAGAGGAATTCAATTTTTTTGTTGAC 540
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 AGTCTTCCTGTAAAGATAAATGTGACAATATATGACTGGGACATTGTATGGAAAAGTACT 600
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 GTTCTTGGTTCTGTTATTGTTCCAGTTGAATCCGAGGGACAGAGTGGACCAGTTTGGTAT 660
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 ACGCTTGATAGTACATCAGGCCAGGTGTGCCTACATATTAAGGCAATCAAGGTCCATGAG 720
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 AGTTCATCGAGGGCTCTAAATAGCTCTGCTGAGGCTGGTGCTCGTAGAAGAATTTCCTTG 780
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 GATAAACAAGGACCCACTGTAGTTCATCAAAAACCAAGTCATTTGCAGACGATATTTGGA 840
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 CTTCCTCCAGATGAGGTTGTTGAACATAGTTATTCATGTGCACTTGAGAGGTCATTTCTG 900
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 TATCACGGGCGCATGTATGTCTCTTCATGGCACATTTGCTTCCATTCAAACGTCTTCTCT 960
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 AAGCAGATCAAGGTTATGCTTCCGTTGAGGGATATTGATGAGATAAGAAGAAGCCAGCAT 1020
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 GCAGTTATTAATCCAGCAATCACGATATTTCTTCGAATGGGAGCTGGAGGACATGGGGTT 1080
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 CCTCCCTTAGGAAGTCCCGATGGAAGAGTCAGATATAAATTTGCATCATTTTGGAATAGA 1140
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 AACCATACATTTAGAGCATTGCAACGAGCTGTCAAGAACTTCCATACAATGATAGAGGCT 1200
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 GAGAAACAGGAACGTGCTCAATCTGCATTACGTGCACACAGTAGCTCAAGAAAAAGTAGC 1260
consensus_12386#1 ------------------------------------------------------------
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 ATGAAGGAGATAAATGTTCCAGAAGATTGTGCTGATTTAACAGGCCAATTACAACCTTTT 1320
consensus_12386#1 -------------------------------------------GCCAATTACAACCTTTT 17
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 GTCAAAGAGGAAGTTCTAGTCACTGTATTCAATGGATCTTTTCCATGTACTGCAGAGGAG 1380
consensus_12386#1 GTCAAAGAGGAAGTTCTAGTCACTGTATTCAAT----------------------AGGAG 55
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 TTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGA 1440
consensus_12386#1 TTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGA 115
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 AAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTG 1500
consensus_12386#1 AAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTG 175
consensus_12386#2 ---------------------------------------------------GGTCAGTTG 9
****** **
consensus_12386#0 AGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATG 1560
consensus_12386#1 AGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATG 235
consensus_12386#2 AGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATG 69
************************************************************
consensus_12386#0 ACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTA 1620
consensus_12386#1 ACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTA 295
consensus_12386#2 ACAGAGTGGCAACATATGGTTCTTTCAGGTGACAAAACAGATCTGGTATTTTAAACTGTA 129
**************************** ********************** ********
consensus_12386#0 CAGCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTG 1680
consensus_12386#1 CAGCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTG 355
consensus_12386#2 CACCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTG 189
** *********************************************************
consensus_12386#0 AAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAA 1740
consensus_12386#1 AAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAA 415
consensus_12386#2 AAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTGCACATTTCAAGAAA 249
************************************************************
consensus_12386#0 TGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGAAGGAAGTC 1800
consensus_12386#1 TGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGAAGGAAGTC 475
consensus_12386#2 TGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGACCGAACTC 309
**************************************************** *** **
consensus_12386#0 CAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGAC 1860
consensus_12386#1 CAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGAC 535
consensus_12386#2 CAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTTTAACCAAGAC 369
************************************************* **********
consensus_12386#0 AATGGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCG 1920
consensus_12386#1 AATGGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCG 595
consensus_12386#2 AATGGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCG 429
************************************************************
consensus_12386#0 GATAATACACCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGA---- 1976
consensus_12386#1 GATAATACACCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGA---- 651
consensus_12386#2 GATAATACCCCAAATGATGAATAATTTTTCTCTAAGTTATGTCTTCTCCTGTAGGAGCCC 489
******** ***********************************************
consensus_12386#0 -TGACATCTACCACCCGTTGATAGTA---GTTTGTTGAAGTGTTAT---AGCAGAAGAAC 2029
consensus_12386#1 -TGACATCTACCACCCGTTGATAGTA---GTTTGTTGAAGTGTTAT---AGCAGAAGAAC 704
consensus_12386#2 CTGCCGCCGGCGACGCGGGCGCCGCCCCCGCCTGCACCGGCGTCATCGGGGCGGAGGAGG 549
** * * * ** ** * * ** * ** ** ** ** **
consensus_12386#0 AGGTGGACCTGTAATTATAATCCACATGTAATAGGGTTTAGCCGGAAAAAGGGGGTGCTT 2089
consensus_12386#1 AGGTGGACCTGTAATTATAATCCACATGTAATAGGGTTTAGCCGGAAAAAGGGGGTGCTT 764
consensus_12386#2 GGGGGGGAGGGGAACCCTACGCTGC-CGCCCTAGGGTTTCGGCGCGG------------- 595
** ** * ** ** * * * ******** * **
consensus_12386#0 ACAAGATCTAACAGTGTATAAATTGTCTATACATTTTGGCTAATGTATATTTGAAAACGC 2149
consensus_12386#1 ACAAGATCTAACAGTGTATAAATTGTCTATACATTTTGGCTAATGTATATTTGAAAA--- 821
consensus_12386#2 ------------------------------------------------------------
consensus_12386#0 ACCTTAAGAAAAAAA 2164
consensus_12386#1 ---------------
consensus_12386#2 ---------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||