cluster # 12395

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Oryza sativa
cluster # 12395 cluster # 12395 Sequences # 10 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12395#0 length = 2218 sequences # 5
consensus_12395#1 length = 963 sequences # 1

consensus_12395#2 length = 786 sequences # 1
consensus_12395#3 length = 774 sequences # 2
consensus_12395#4 length = 453 sequences # 1

consensusID : consensus_12395#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2218
fasta sequence

                              [CCCACACCTCTCCTCCTCCCTCTTCTCCTCCTCCCCTCTCCCCACCACCCTCCTCTCCTCCCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCCCCGCCGCCTCCACCCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCATCATGGCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGACCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGCGACCCCCGATCCGACGCCATCCCCCGCGAGGTGCTTCACGCTTGTTACACAAAGGTGTCACCCTCAGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATCCTCGATCTGGATCACAAAGAGTTTGAAAGACCTGATTTTCCTCAGCTGTTCTCAGGAGCAAATCCTTTGGTTGGGAGTTCACCTTATGCCCAGTGCTATGGTGGACACCAGTTTGGTTCATGGGCTGGTCAG-TTGGGCGACGGACGAGCAATAACTCTTGGAGAGGTTATCAACTCTCGAGGTGAGAGATGGGAGTTGCAGCTCAAGGGCTGTGGAAAGACTCCATACAGCCGATTTGCAGATGGCCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATG-CATGGCCTAGGCATCCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGCAAATCTGTTGTTCGAGATATGTTCTATGATGGCAATTCAAAGGAGGAACCAGGTGCCATTGTATGCCGTGTAGCACCATCCTTTTTGCGTTTTGGTTCATATCAGATACATGCTACAAGGGACAAAGAGGACCTTGAAATTGTTCGTCATTTGGCAGACTACACAATACGTCATCACTACCCACATCTCGAAAATATTAAAAAGAGTGAAGGTTTATCTTTTGAAGCAGCTATAGGGGACTCTCCAGCGATAGATCTTACTTCGAACAAATATGCAGCCTGGGCAGTTGAGGTTGCAGAGCGCACTGCTTTCTTGATAGCAAGGTGGCAAGGTGTTGGTTTTACCCATGGTGTGCTCAACACGGATAATATGAGTGTATTAGGACTAACTATTGACTATGGACCCTTTGGCTTTTTGGATGCTTTTGATCCTAGCTATACTCCAAATACAACAGACCTCCCTGGGAAGAGATACTGTTTTGCAAATCAACCTGATGTTGGCTTGTGGAATATTGCTCAGTTTACCTCACCATTGACAGCTGCCGAACTTATCAGCAAAGATGAGGCAAATTATGTGATGGAGAGGTACGGGACAAAGTTTATGGATGAGTATCAATCCATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAA-GCATCACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTCGAGTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTGAACAGATTATATTTTCGCAGATGAACATGATGTGCATTTAGTTTTAGCTGTCCATCTAATTATGTCCAGCAACATGAGAGGTGTT]

[+] EMBL AK072187             [CCCACACCTCTCCTCCTCCCTCTTCTCCTCCTCCCCTCTCCCCACCACCCTCCTCTCCTCCCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCCCCGCCGCCTCCACCCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCATCATGGCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGACCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGCGACCCCCGATCCGACGCCATCCCCCGCGAGGTGCTTCACGCTTGTTACACAAAGGTGTCACCCTCAGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATCCTCGATCTGGATCACAAAGAGTTTGAAAGACCTGATTTTCCTCAGCTGTTCTCAGGAGCAAATCCTTTGGTTGGGAGTTCACCTTATGCCCAGTGCTATGGTGGACACCAGTTTGGTTCATGGGCTGGTCAG TTGGGCGACGGACGAGCAATAACTCTTGGAGAGGTTATCAACTCTCGAGGTGAGAGATGGGAGTTGCAGCTCAAGGGCTGTGGAAAGACTCCATACAGCCGATTTGCAGATGGCCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATG CATGGCCTAGGCATCCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGCAAATCTGTTGTTCGAGATATGTTCTATGATGGCAATTCAAAGGAGGAACCAGGTGCCATTGTATGCCGTGTAGCACCATCCTTTTTGCGTTTTGGTTCATATCAGATACATGCTACAAGGGACAAAGAGGACCTTGAAATTGTTCGTCATTTGGCAGACTACACAATACGTCATCACTACCCACATCTCGAAAATATTAAAAAGAGTGAAGGTTTATCTTTTGAAGCAGCTATAGGGGACTCTCCAGCGATAGATCTTACTTCGAACAAATATGCAGCCTGGGCAGTTGAGGTTGCAGAGCGCACTGCTTTCTTGATAGCAAGGTGGCAAGGTGTTGGTTTTACCCATGGTGTGCTCAACACGGATAATATGAGTGTATTAGGACTAACTATTGACTATGGACCCTTTGGCTTTTTGGATGCTTTTGATCCTAGCTATACTCCAAATACAACAGACCTCCCTGGGAAGAGATACTGTTTTGCAAATCAACCTGATGTTGGCTTGTGGAATATTGCTCAGTTTACCTCACCATTGACAGCTGCCGAACTTATCAGCAAAGATGAGGCAAATTATGTGATGGAGAGGTACGGGACAAAGTTTATGGATGAGTATCAATCCATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAATTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAA GCATCACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTCGAGTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTGAACAGATTATATTTTCGCAGATGAACATGATGTGCATTTAGTTTTAGCTGTCCATCTAATTATGTCCAGCAACATGAGAGGTGTT]
[+] EMBL CB655165             [                                                                                 CCTCCTCCCTCTCCCCCTCCCCCTCCCCGCCGCCTCCACCCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCATCATGGCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGACCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGCGACCCCCGATCCGACGCCATCCCCCGCGAGGTGCTTCACGCTTGTTACACAAAGGTGTCACCCTCAGCGCCCGAGGACAACCCTATGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATCCTCGATCTGGATCACAAAGAGCTTGAAAGACCTGATTTTCCTCAGCTGATCTCAGGAGCAAATCCTTTGGTTGGGAGTTCACCTTATGCCCAGTGCTATGGTGGACACCACTTTGGTACATGGGCTGGACAGATTGGGCGACGGACGAGCAATAACTCTTGGAGAGGTTATCAACTCTCGAGGAGAGAGATGGGAGTTGCAGCTCAAGGGCTGTGGAAAGACTCCATACAGCCGATTTGCCTATGGCCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATGCCATGGCCTAGGCATCCCTACAACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB620123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCCTGGGCTGTGGAAAGACTCCATACAGCCGATTTGCAGATGGCCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATG CATGGCCTAGGCATCCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGCAAATCTGTTGTTCGAGATTTGTTCTATGATGGCAATTCAAAGGAGGAACCAGGTGCCATTGTATGCCGTGTAGCACCATCCTTTTTGCGTTTTGGTTCATATCAGATACATGCTACAAGGGACAAAGAGGACCTTGAAATTGTTCGTCATTTGGCAGACTACACAATACGTCATCACTACGCACATCTCGAAAATATTAAAAAGAGTGAAGGTTTATCTTTTGAAGCAGCTATAGGGGACTCTCCAGCGATAGATCTTACTTCGAACAAATATGCAGCCTGGGCAGTTGAGGTTGCAGAGCGCACTGCTTTCTTGATAGCAAGGTGGCAAGGTGTTGGTTTTACCCATGGTGTGCTCAACACGGATAATATGAGTGTATTAGGACTAACTATTGACTATGGACCCTTTGGCTTTTTGGATGCTTTTGATCCTAGCTATACTCCAAATACAACAGACCTCCCTGGGAAGAGATACTGTTTTGCAAATCAACCTGATGTTGGCTTGTGGAATATTGCTCAGTTTACCTCACCATTGACAGCTGCCGAACTTATCAGCAAAGATGAGGCAAATTATGTGATGGAGAGGTACGGGACAAAGTTTATGGATGAGTATCAATCCATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB619087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCTGCCGAACTTATCAGCAAAGATGAGGCAAATTATGTGATGGAGAGGTACGGGACAAAGTTTATGGATGAGTATCAATCCATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGT TAAAGGCATCAC                                                                                                                                                                                                                                           ]
[-] EMBL CB620124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGCAAATTATGTGATGGAGAGGTACGGGACAAAGTTTATGGATGAGTATCAATCCATAATGACCAGGAAACTTGGTCTCCCCAAGTATAATAAGCAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAA GCATCACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTCGAGTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGAGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTGAACAGATTATATTGGCGCAGATGAACATGATGTGCATTTAGTTTa                                        ]




>consensus_12395#0
CCCACACCTCTCCTCCTCCCTCTTCTCCTCCTCCCCTCTCCCCACCACCCTCCTCTCCTC
CCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCCCCGCCGCCTCCAC
CCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCATCATGGCCTCCGC
CGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGACCGCG
GCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGCGACCC
CCGATCCGACGCCATCCCCCGCGAGGTGCTTCACGCTTGTTACACAAAGGTGTCACCCTC
AGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATCCTCGA
TCTGGATCACAAAGAGTTTGAAAGACCTGATTTTCCTCAGCTGTTCTCAGGAGCAAATCC
TTTGGTTGGGAGTTCACCTTATGCCCAGTGCTATGGTGGACACCAGTTTGGTTCATGGGC
TGGTCAGTTGGGCGACGGACGAGCAATAACTCTTGGAGAGGTTATCAACTCTCGAGGTGA
GAGATGGGAGTTGCAGCTCAAGGGCTGTGGAAAGACTCCATACAGCCGATTTGCAGATGG
CCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATGCATGGCCT
AGGCATCCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGCAAATCTGTTGTTCGAGA
TATGTTCTATGATGGCAATTCAAAGGAGGAACCAGGTGCCATTGTATGCCGTGTAGCACC
ATCCTTTTTGCGTTTTGGTTCATATCAGATACATGCTACAAGGGACAAAGAGGACCTTGA
AATTGTTCGTCATTTGGCAGACTACACAATACGTCATCACTACCCACATCTCGAAAATAT
TAAAAAGAGTGAAGGTTTATCTTTTGAAGCAGCTATAGGGGACTCTCCAGCGATAGATCT
TACTTCGAACAAATATGCAGCCTGGGCAGTTGAGGTTGCAGAGCGCACTGCTTTCTTGAT
AGCAAGGTGGCAAGGTGTTGGTTTTACCCATGGTGTGCTCAACACGGATAATATGAGTGT
ATTAGGACTAACTATTGACTATGGACCCTTTGGCTTTTTGGATGCTTTTGATCCTAGCTA
TACTCCAAATACAACAGACCTCCCTGGGAAGAGATACTGTTTTGCAAATCAACCTGATGT
TGGCTTGTGGAATATTGCTCAGTTTACCTCACCATTGACAGCTGCCGAACTTATCAGCAA
AGATGAGGCAAATTATGTGATGGAGAGGTACGGGACAAAGTTTATGGATGAGTATCAATC
CATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGCT
TAACAACCTGGCTGTTGATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAATGT
CAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCT
AGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGA
GTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCC
AAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGA
TTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGG
AATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCT
GTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTA
TATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAAGCAT
CACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTCGAGTTATC
ATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAAATAGAGCCACCAAACTCATC
CGATTTTCTTAGATATAGTGCTTTGTTGTTGTGAACAGATTATATTTTCGCAGATGAACA
TGATGTGCATTTAGTTTTAGCTGTCCATCTAATTATGTCCAGCAACATGAGAGGTGTT

consensusID : consensus_12395#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 963
fasta sequence

                              [CCCTCCTCTCCTCCCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCCCCGCCGCCTCCAGCCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCATCATGGCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGACCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGCGACCCCCGATCCGACGCCATCCTCCGCGAGGTGCTTCACGCTTGTTACACANAGGTGTCACCCTCAGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATCCTCGATCTGGATCACAAAGAAGTTGAAAGACCTGATTNNTCTCAGCTGGTCTCAGGAGCAAATCCTTTAGTTGGGAGTTCACGCTATGCACAGTGCTATGGTGGACACCANTTTTGTTCATGGGGCTGGCAGTTGGCAACAGACGAAGCATACTCTATGAGAGGTATCAACTCTCGAGGTGAGAGATGGAGTTGCAGCTCATGGCTGTGGAATGCTTCATAACAGCGATTACAAATTGCATTGCTGCTACCGACAGCTTCAGGAATCTATCAGTGAGTATGCTGGCCTGCTTCCTCACTGTCGCCTTGTTAGTGACCGCAACTGTGGTAGATATGCATAAGGATTCAAAGAGACTGTCGTTGATCAGTACTCTCTCTTGCGTGTGCTTTAACATGTCAAGAGATAGCTGGAAGTNGTCGCGGACACAAATACTTCCTCAGCGATAAAAAGGTGGTTATAGAAGGATTCTTGTGTCGCAAAGCTTGCGAGCGGAANTATATGTGACGAGTATGTTATGATATGCTCGTGTAGCGTGAGCGTAACTACTCTAGTTGTCGCATGGTGTTGAGTGAATATATTATTAGTCAACTGAGTT]

[+] EMBL AW155015             [CCCTCCTCTCCTCCCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCCCCGCCGCCTCCAGCCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCATCATGGCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGACCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGCGACCCCCGATCCGACGCCATCCTCCGCGAGGTGCTTCACGCTTGTTACACANAGGTGTCACCCTCAGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATCCTCGATCTGGATCACAAAGAAGTTGAAAGACCTGATTNNTCTCAGCTGGTCTCAGGAGCAAATCCTTTAGTTGGGAGTTCACGCTATGCACAGTGCTATGGTGGACACCANTTTTGTTCATGGGGCTGGCAGTTGGCAACAGACGAAGCATACTCTATGAGAGGTATCAACTCTCGAGGTGAGAGATGGAGTTGCAGCTCATGGCTGTGGAATGCTTCATAACAGCGATTACAAATTGCATTGCTGCTACCGACAGCTTCAGGAATCTATCAGTGAGTATGCTGGCCTGCTTCCTCACTGTCGCCTTGTTAGTGACCGCAACTGTGGTAGATATGCATAAGGATTCAAAGAGACTGTCGTTGATCAGTACTCTCTCTTGCGTGTGCTTTAACATGTCAAGAGATAGCTGGAAGTNGTCGCGGACACAAATACTTCCTCAGCGATAAAAAGGTGGTTATAGAAGGATTCTTGTGTCGCAAAGCTTGCGAGCGGAANTATATGTGACGAGTATGTTATGATATGCTCGTGTAGCGTGAGCGTAACTACTCTAGTTGTCGCATGGTGTTGAGTGAATATATTATTAGTCAACTGAGTT]




>consensus_12395#1
CCCTCCTCTCCTCCCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCC
CCGCCGCCTCCAGCCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCA
TCATGGCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGA
ACAGCCGACCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGC
TCCCCGGCGACCCCCGATCCGACGCCATCCTCCGCGAGGTGCTTCACGCTTGTTACACAN
AGGTGTCACCCTCAGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGG
CTGACATCCTCGATCTGGATCACAAAGAAGTTGAAAGACCTGATTNNTCTCAGCTGGTCT
CAGGAGCAAATCCTTTAGTTGGGAGTTCACGCTATGCACAGTGCTATGGTGGACACCANT
TTTGTTCATGGGGCTGGCAGTTGGCAACAGACGAAGCATACTCTATGAGAGGTATCAACT
CTCGAGGTGAGAGATGGAGTTGCAGCTCATGGCTGTGGAATGCTTCATAACAGCGATTAC
AAATTGCATTGCTGCTACCGACAGCTTCAGGAATCTATCAGTGAGTATGCTGGCCTGCTT
CCTCACTGTCGCCTTGTTAGTGACCGCAACTGTGGTAGATATGCATAAGGATTCAAAGAG
ACTGTCGTTGATCAGTACTCTCTCTTGCGTGTGCTTTAACATGTCAAGAGATAGCTGGAA
GTNGTCGCGGACACAAATACTTCCTCAGCGATAAAAAGGTGGTTATAGAAGGATTCTTGT
GTCGCAAAGCTTGCGAGCGGAANTATATGTGACGAGTATGTTATGATATGCTCGTGTAGC
GTGAGCGTAACTACTCTAGTTGTCGCATGGTGTTGAGTGAATATATTATTAGTCAACTGA
GTT

consensusID : consensus_12395#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 786
fasta sequence

                              [CTTTTTTGCAATCAACCTGATGTGGCTTGTGGAATATGCCCAGTTTCCCTCACCATTGCCAGCTGCCGAACTTATCACCAAGATTAAGGCAAATTATGTGATGGAAAGGTACCGGGCCAAAGTTTATGGATGAGTATCAATCCATAATGCCCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAAGCATCACATGCTATTTTACTGCCGATGCATAAAAAAAAAAAAAAAAAA]

[-] EMBL BE040363             [CTTTTTTGCAATCAACCTGATGTGGCTTGTGGAATATGCCCAGTTTCCCTCACCATTGCCAGCTGCCGAACTTATCACCAAGATTAAGGCAAATTATGTGATGGAAAGGTACCGGGCCAAAGTTTATGGATGAGTATCAATCCATAATGCCCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAAGCATCACATGCTATTTTACTGCCGATGCATAAAAAAAAAAAAAAAAAA]




>consensus_12395#2
CTTTTTTGCAATCAACCTGATGTGGCTTGTGGAATATGCCCAGTTTCCCTCACCATTGCC
AGCTGCCGAACTTATCACCAAGATTAAGGCAAATTATGTGATGGAAAGGTACCGGGCCAA
AGTTTATGGATGAGTATCAATCCATAATGCCCAGGAAACTTGGTCTACCCAAGTATAATA
AGCAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAACT
TTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTG
TTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTT
GGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAG
CTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAA
TTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAAC
ATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCAT
ACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAA
ATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCT
ACTGCTATAGTGTCTAAAGCATCACATGCTATTTTACTGCCGATGCATAAAAAAAAAAAA
AAAAAA

consensusID : consensus_12395#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 774
fasta sequence

                              [CAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAATTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAAGCATCACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTCGAGTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTGAACAGATTATATAAGGGCAGATGAACATGATGTGCATTTAGTTTTAAACTTTAAAAGGGAA]

[-] EMBL CB655166             [CAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAATTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAAGCATCACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTCGAGTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTGAACAGATTATATAAGGGCAGATGAACATGATGTGCATTTAGTTTTAAACTTTAAAAGGGAA]
[+] EMBL OSR05381A            [                                                                                                                                                  TGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCAACAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTANTNTTTTCTGTATAGGNGGTTTAATTTTGAGCTACTGCTATAGTGTCT AAGCATCACATGCTATTTTACTGCCGATGCAT TCAaa                                                                                                                                                                                      ]




>consensus_12395#3
CAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAATTTT
TTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTT
CCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGG
GTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCT
GCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATT
GACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACAT
CCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATAC
AGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAAT
ATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTAC
TGCTATAGTGTCTAAAGCATCACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTG
TTGTTAATCTTCGAGTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAA
ATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTGAACAGAT
TATATAAGGGCAGATGAACATGATGTGCATTTAGTTTTAAACTTTAAAAGGGAA

consensusID : consensus_12395#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 453
fasta sequence

                              [CAGAGAACGCGTGGGCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAAGCATCACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTCGAGTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTGGAACAGATTATATTTTCGCAGATGAACCATGGATGTGCATTTAGTTTTAAAAAAAAAAAAN]

[+] EMBL AU057513             [CAGAGAACGCGTGGGCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAAGCATCACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTCGAGTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTGGAACAGATTATATTTTCGCAGATGAACCATGGATGTGCATTTAGTTTTAAAAAAAAAAAAN]




>consensus_12395#4
CAGAGAACGCGTGGGCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGA
ATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTG
TCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGTTTTTTTTAT
ATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTCTAAAGCATC
ACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTCGAGTTATCA
TATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAAATAGAGCCACCAAACTCATCC
GATTTTCTTAGATATAGTGCTTTGTTGTTGTGGAACAGATTATATTTTCGCAGATGAACC
ATGGATGTGCATTTAGTTTTAAAAAAAAAAAAN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      CCCACACCTCTCCTCCTCCCTCTTCTCCTCCTCCCCTCTCCCCACCACCCTCCTCTCCTC 60
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      CCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCCCCGCCGCCTCCAC 120
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      CCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCATCATGGCCTCCGC 180
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      CGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGACCGCG 240
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      GCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGCGACCC 300
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      CCGATCCGACGCCATCCCCCGCGAGGTGCTTCACGCTTGTTACACAAAGGTGTCACCCTC 360
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      AGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATCCTCGA 420
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      TCTGGATCACAAAGAGTTTGAAAGACCTGATTTTCCTCAGCTGTTCTCAGGAGCAAATCC 480
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      TTTGGTTGGGAGTTCACCTTATGCCCAGTGCTATGGTGGACACCAGTTTGGTTCATGGGC 540
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      TGGTCAGTTGGGCGACGGACGAGCAATAACTCTTGGAGAGGTTATCAACTCTCGAGGTGA 600
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      GAGATGGGAGTTGCAGCTCAAGGGCTGTGGAAAGACTCCATACAGCCGATTTGCAGATGG 660
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      CCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATGCATGGCCT 720
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      AGGCATCCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGCAAATCTGTTGTTCGAGA 780
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      TATGTTCTATGATGGCAATTCAAAGGAGGAACCAGGTGCCATTGTATGCCGTGTAGCACC 840
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      ATCCTTTTTGCGTTTTGGTTCATATCAGATACATGCTACAAGGGACAAAGAGGACCTTGA 900
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      AATTGTTCGTCATTTGGCAGACTACACAATACGTCATCACTACCCACATCTCGAAAATAT 960
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      TAAAAAGAGTGAAGGTTTATCTTTTGAAGCAGCTATAGGGGACTCTCCAGCGATAGATCT 1020
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      TACTTCGAACAAATATGCAGCCTGGGCAGTTGAGGTTGCAGAGCGCACTGCTTTCTTGAT 1080
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      AGCAAGGTGGCAAGGTGTTGGTTTTACCCATGGTGTGCTCAACACGGATAATATGAGTGT 1140
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      ATTAGGACTAACTATTGACTATGGACCCTTTGGCTTTTTGGATGCTTTTGATCCTAGCTA 1200
consensus_12395#1      ------------------------------------------------------------
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      -------------------------------------CTTTTTTGCAATCAACCTGATGT 23
consensus_12395#0      TACTCCAAATACAACAGACCTCCCTGGGAAGAGATACTGTTTTGCAAATCAACCTGATGT 1260
consensus_12395#1      ------------------------------------------------------CCCTCC 6
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      -GGCTTGTGGAATAT-GCCCAGTTTCCCTCACCATTGCCAGCTGCCGAACTTATCACCAA 81
consensus_12395#0      TGGCTTGTGGAATATTGCTCAGTTTACCTCACCATTGACAGCTGCCGAACTTATCAGCAA 1320
consensus_12395#1      TCTCCTCCCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCCCCGCCG 66
                                                                                   

consensus_12395#3      ------------------------------------------------------------
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      GATTAAGGCAAATTATGTGATGGAAAGGTACCGGGCCAAAGTTTATGGATGAGTATCAAT 141
consensus_12395#0      AGATGAGGCAAATTATGTGATGGAGAGGTAC-GGGACAAAGTTTATGGATGAGTATCAAT 1379
consensus_12395#1      CCTCCAGCCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTG-GCATCATG 125
                                                                                   

consensus_12395#3      -----------------------------------------CAGCTAATAGGCAAGCTGC 19
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      CCATAATGCCCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGC 201
consensus_12395#0      CCATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGC 1439
consensus_12395#1      GCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGC 185
                                                                                   

consensus_12395#3      TTAACAACCTGGCTGTTG-ATAAGGTCGATTATACAAATTTTTTCCGTCTTCTTTCAAAT 78
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      TTAACAACCTGGCTGTTG-ATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAAT 260
consensus_12395#0      TTAACAACCTGGCTGTTG-ATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAAT 1498
consensus_12395#1      CGACCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCC 245
                                                                                   

consensus_12395#3      GTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTC 138
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      GTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTC 320
consensus_12395#0      GTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTC 1558
consensus_12395#1      GGCGACCCCCGATCCGACGCCATCCTCCGCGAGGTGCTTCACGCTTGTTACACANAGGTG 305
                                                                                   

consensus_12395#3      CTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAA 198
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      CTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAA 380
consensus_12395#0      CTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAA 1618
consensus_12395#1      TCACCCTCAGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGAC 365
                                                                                   

consensus_12395#3      GAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAAT 258
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      GAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAAT 440
consensus_12395#0      GAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAAT 1678
consensus_12395#1      ATCCTCGATCTGGATCACAAAGAAGTTGAAAGACCTGATTNNTCTCAGCTGGTCTCAGGA 425
                                                                                   

consensus_12395#3      CCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGT 318
consensus_12395#4      ------------------------------------------------------------
consensus_12395#2      CCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGT 500
consensus_12395#0      CCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGT 1738
consensus_12395#1      GCAAATCCTTTAGTTGGGAGTTCACGCTA------TGCACAGTGCTATGGTGGACACCAN 479
                                                                                   

consensus_12395#3      GATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCA 378
consensus_12395#4      ---CAGAGAACGCGTGGGCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCA 57
consensus_12395#2      GATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCA 560
consensus_12395#0      GATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCA 1798
consensus_12395#1      TTTTGTTCATGGGGCTGGCAGTTGGCAACAGACGAAGCATACTC-TATGAGAGGTATCAA 538
                                       * * ***    * **     * * *  * *****   * * * *

consensus_12395#3      GGAATGGAGAAATATGCCCGGTTGCCACC---AGCCTGGGCATACAGGCCAGGAGTG--T 433
consensus_12395#4      GGAATGGAGAAATATGCCCGGTTGCCACC---AGCCTGGGCATACAGGCCAGGAGTG--T 112
consensus_12395#2      GGAATGGAGAAATATGCCCGGTTGCCACC---AGCCTGGGCATACAGGCCAGGAGTG--T 615
consensus_12395#0      GGAATGGAGAAATATGCCCGGTTGCCACC---AGCCTGGGCATACAGGCCAGGAGTG--T 1853
consensus_12395#1      CTCTCGAGGTGAGAGATGGAGTTGCAGCTCATGGCTGTGGAATGCTTCATAACAGCGATT 598
                            *  *  * *      *****  *     **   ** ** *     *  ** *  *

consensus_12395#3      GCATGCTGTCCTGCTCATCATGAAA---CCAACATTCCATCACGTCAAATATGCAAACTT 490
consensus_12395#4      GCATGCTGTCCTGCTCATCATGAAA---CCAACATTCCATCACGTCAAATATGCAAACTT 169
consensus_12395#2      GCATGCTGTCCTGCTCATCATGAAA---CCAACATTCCATCACGTCAAATATGCAAACTT 672
consensus_12395#0      GCATGCTGTCCTGCTCATCATGAAA---CCAACATTCCATCACGTCAAATATGCAAACTT 1910
consensus_12395#1      ACAAATTGCATTGCTGCTACCGACAGCTTCAGGAATCTATCA--GTGAGTATGCTGGCCT 656
                        **   **   ****  *   ** *    **  * ** ****     * *****   * *

consensus_12395#3      GTTTTTTTTATATTATTTTTTT-----CTGTATAGGAGGTTTAATT---TTGAGCTACTG 542
consensus_12395#4      GTTTTTTTTATATTATTTTTTT-----CTGTATAGGAGGTTTAATT---TTGAGCTACTG 221
consensus_12395#2      GTTTTTTTTATATTATTTTTTT-----CTGTATAGGAGGTTTAATT---TTGAGCTACTG 724
consensus_12395#0      GTTTTTTTTATATTATTTTTTT-----CTGTATAGGAGGTTTAATT---TTGAGCTACTG 1962
consensus_12395#1      GCTTCCTCACTGTCGCCTTGTTAGTGACCGCAACTGTGGTAGATATGCATAAGGATTCAA 716
                       * **  *   * *    ** **     * * *   * ***  *  *   *   * * *  

consensus_12395#3      CTATAGTGTC-TAAAGCATCACATGCTATTTTAC-TGCCGATGCATATCAGAAACTGG-T 599
consensus_12395#4      CTATAGTGTC-TAAAGCATCACATGCTATTTTAC-TGCCGATGCATATCAGAAACTGG-T 278
consensus_12395#2      CTATAGTGTC-TAAAGCATCACATGCTATTTTAC-TGCCGATGCATAAAAAAAAAAAA-A 781
consensus_12395#0      CTATAGTGTC-TAAAGCATCACATGCTATTTTAC-TGCCGATGCATATCAGAAACTGG-T 2019
consensus_12395#1      AGAGACTGTCGTTGATCAGTACTCTCTCTTGCGTGTGCTTTAACATGTCAAGAGATAGCT 776
                         * * **** *  * **  **   ** **     ***     ***   *  *       

consensus_12395#3      GTTGTTAATCTTCGA-GTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAG----- 653
consensus_12395#4      GTTGTTAATCTTCGA-GTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAG----- 332
consensus_12395#2      AAAAA------------------------------------------------------- 786
consensus_12395#0      GTTGTTAATCTTCGA-GTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAG----- 2073
consensus_12395#1      GGAAGTNGTCGCGGACACAAATACTTCCTCAGCGATAAAAAGGTGGTTATAGAAGGATTC 836
                                                                                   

consensus_12395#3      TTGGGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTG 713
consensus_12395#4      TTGGGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTG 392
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      TTGGGAAATAGAGCCACCAAACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTG 2133
consensus_12395#1      TTGTGTCGCAAAGCTTGCGAGCGGAANTATATGTGACGAGTATGTTATGATATGCTCGTG 896
                                                                                   

consensus_12395#3      -AACA-GATTATATAAGGGCAGATGAAC-ATG-ATGTGCATTTAGTTTTAAACTTTAAAA 769
consensus_12395#4      GAACA-GATTATATTTTCGCAGATGAACCATGGATGTGCATTTAGTTTTAAAAAAAAAAA 451
consensus_12395#2      ------------------------------------------------------------
consensus_12395#0      -AACA-GATTATATTTTCGCAGATGAAC-ATG-ATGTGCATTTAGTTTTAGCTGTCCATC 2189
consensus_12395#1      TAGCGTGAGCGTAACTACTCTAGTTGTCGCATGGTGTTGAGTGAATATATTATTAGTCAA 956
                                                                                   

consensus_12395#3      GGGAA------------------------ 774
consensus_12395#4      AN--------------------------- 453
consensus_12395#2      -----------------------------
consensus_12395#0      TAATTATGTCCAGCAACATGAGAGGTGTT 2218
consensus_12395#1      CTGAGTT---------------------- 963