|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12401#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1776 fasta sequence
[ACGACGCAGCAGCAGCGAGAAACGAACGTCGAAGAAGAAGAAGACGAGGGGGAAAAACCGCGGAAAACCACGCGCCGCTGGGCGCGCGCTGGGCTGGGCCCCTCGCGCGCGACGCGACACGACACGACACGACACGACGGCACGAGCCCACCCCGTCTCCCTCCCGTCTCCCTCCCTTTTCCTCTCCCCGGCCGCTGCCTGCCTCGGCAGCCCATGTGCTCACATGCCACTCCGCCTCGCCACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAAC-TGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACA--GGGGAAA-CAGGCACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGCTCGTTCATCCAAAAAAAAAAAGGCCTGATGTAAATATTTCACCAGTATCGAAGAGTAGTAGCAATGAAGAGACCCCCAAAAAGATACTATAAAAGA]
[+] EMBL CB640138 [ACGACGCAGCAGCAGCGAGAAACGAACGTCGAAGAAGAAGAAGACGAGGGGGAAAAACCGCGGAAAACCACGCGCCGCTGGGCGCGCGCTGGGCTGGGCCCCTCGCGCGCGACGCGACACGACACGACACGACACGACGGCACGAGCCCACCCCGTCTCCCTCCCGTCTCCCTCCCTTTTCCTCTCCCCGGCCGCTGCCTGCCTCGGCAGCCCATGTGCTCACATGCCACTCCGCCTCGCCACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAA GAGGAGGC ]
[+] EMBL AK107217 [ CCCGGCCGCTGCCTGCCTCGGCAGCCCATGTGCTCACATGCCACTCCGCCTCGCCACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAAC TGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACA GGGGAAA CAGACACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGC ]
[+] EMBL CB671333 [ ACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTG ]
[+] EMBL CB656543 [ AGCCACTTCTCGCTCGCTTGCTCACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAAC TGTGAAAATTGCTG ]
[+] EMBL AY224453 [ GGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGGAGCGYAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTG CAAGACAAGAACTTGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACAAGGGGGAAACCAGGCACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAG ]
[-] EMBL CB656544 [ GAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAAC TGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACA GGGGAAA CAGGCACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGCTCGTTCATCCAAAAAAAAAAAGG ]
[-] EMBL CB658744 [ AGTGATATGACA GGGGAAA CAGGCACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGCTCGTTCATCCATGTTTGATGTTCCCTGATGTAAATATTTCACCAGTATCGAAGAGTAGTAGCAATGAAGAGACCCCCAAAAAGATACTATAAAAGA]
[+] EMBL BU099185 [ TTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACANGGATGCCTTTCATGCTTCAGGC ]
[+] EMBL CA998064 [ GATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACGGATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTCGTGTAATTCGATTACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTGGTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGAAGAACCAGCTCGGCTCGTTCATCCAAAAAAAAA ]
consensusID : consensus_12401#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1707 fasta sequence
[TGCGCTCTCACATGGAGTCGTCGTCGTCTCCCCAAACACGACGACCTCGAACCGCCTCCGTCCCCGCCTCGCCAACCCGTCCCCTTCCCCTGTAGCCACCGCGACCACCACCACCACCACGCCGCGGCATCCACAACGCCACCAGAGTACAGAGACGTTCCACCCACCCCGGGCCACCGAACCCAACCCCCCCAGCTCGCTCGATCGATCGCTAGCTCCGACGACAGGTTTGAGCGCGATGAGGCATCCCGGCGCGGGCGGCGGGAGCGGGGACGCCGGGTTCGTCCGGGCGGACCAGATCGACCTCAAGAGCCTCGACGAGCAGCTGGAGCGCCACCTCGGCCGCCCCGCGGAGCGGGCCGCGTCGCAGCACGGGGGCAGCGGGAGCCGCCGCGGCGAGTCCGCCAGGCTCGGGCTCGGGGAGGAGCCGCCGCAGGCGCCGCACCATCAGCGGCGCCGGGAGGACTGGGAGATCGACCCCGCCAAGCTCGTCATCAGAGGCGTCATCGCCCGCGGCACGTTCGGCACCGTCCACCGCGGCGTCTACGGCGGCCAGGACGTCGCTGTCAAAATGCTTGACTGGGGGGAGGATGGCCATAGATCAGAACGAGAAATTTCTTCACTAAGAGCAGCATTTGCACAAGAGGTCGCTGTCTGGCATAAGCTTGATCATCCAAATGTTACCAAGTTTATTGGGGCTATAATGGGTGCAAGAGATTTAAATATACAGACAGAACATGGACATTTTGGCATGCCAAGTAATATTTGCTGCGTTGTTGTCGAGTACCTTGCCGGAGGTGCACTGAAAAATTTTCTGATAAAGAACAGGAGAAGGAAGCTAGCCTATAAAGTTGTGGTCCAATTGGCTCTTGACCTTGCTAGGGGATTAAGCTATCTTCACTCAAAGAAGATAGTTCATCGTGATGTGAAGACTGAAAATATGCTCCTTGACAAATCAAGAACAGTGAAAATCGCTGATTTTGGTGTTGCACGAATTGAGGCTTCAAATCCTAGTGATATGACGGGTGAAACAGGCACACTTGGTTACATGGCACCCGAGGTTCTCAACGGCCATCCTTACAACAGGAAGTGTGATGTATATCGCTTTGGAATCTGCCTATGGGAGATATACTGCTGCGATATGCCGTATCCTGATCTGAGTTTCTCAGAGGTCACTTCAGCTGTTGTTCGTCAGAACTTGAGGCCTGAGATACCGCGCTGCTGCCCTAGCTCCTTGGCCAACGTGATGAAGCGCTGCTGGGACGCGAACCCGGACAAGCGGCCGGCGATGGCGGAGGTGGTGTCCATGCTGGAGGCGATCGACACGTCCAAGGGCGGTGGCATGATCCCGACCGACCAGCCACAGGGATGCTTCTCGTGCTTCGGTCGGCACCGAGGCCCCTGACGAACTTGATCTGATGGCGTCACTGATAATTTGTTATCGCTATATCTCAGTGTAATCTAATCGCATTCGCTATGGCTAATTTGAGGAGCTGTGTGATTGATGTAAATGCCTTAACGGTCCAGCACCTCAGCTTCATCGTCGTATGATCGCTGCGAATCCTAATGCTTGGCCTATGATAAGATCGAGCTTAGAAGAGATTATTGTGACAGAGCTGCCGACGAAGTTTACAATCTCATCATATATGGTCATGAAGTAGACCCACTGTACTATTGCAGTGTAATCGACATCTTTGCAGAATGTTA]
[+] EMBL AK108130 [TGCGCTCTCACATGGAGTCGTCGTCGTCTCCCCAAACACGACGACCTCGAACCGCCTCCGTCCCCGCCTCGCCAACCCGTCCCCTTCCCCTGTAGCCACCGCGACCACCACCACCACCACGCCGCGGCATCCACAACGCCACCAGAGTACAGAGACGTTCCACCCACCCCGGGCCACCGAACCCAACCCCCCCAGCTCGCTCGATCGATCGCTAGCTCCGACGACAGGTTTGAGCGCGATGAGGCATCCCGGCGCGGGCGGCGGGAGCGGGGACGCCGGGTTCGTCCGGGCGGACCAGATCGACCTCAAGAGCCTCGACGAGCAGCTGGAGCGCCACCTCGGCCGCCCCGCGGAGCGGGCCGCGTCGCAGCACGGGGGCAGCGGGAGCCGCCGCGGCGAGTCCGCCAGGCTCGGGCTCGGGGAGGAGCCGCCGCAGGCGCCGCACCATCAGCGGCGCCGGGAGGACTGGGAGATCGACCCCGCCAAGCTCGTCATCAGAGGCGTCATCGCCCGCGGCACGTTCGGCACCGTCCACCGCGGCGTCTACGGCGGCCAGGACGTCGCTGTCAAAATGCTTGACTGGGGGGAGGATGGCCATAGATCAGAACGAGAAATTTCTTCACTAAGAGCAGCATTTGCACAAGAGGTCGCTGTCTGGCATAAGCTTGATCATCCAAATGTTACCAAGTTTATTGGGGCTATAATGGGTGCAAGAGATTTAAATATACAGACAGAACATGGACATTTTGGCATGCCAAGTAATATTTGCTGCGTTGTTGTCGAGTACCTTGCCGGAGGTGCACTGAAAAATTTTCTGATAAAGAACAGGAGAAGGAAGCTAGCCTATAAAGTTGTGGTCCAATTGGCTCTTGACCTTGCTAGGGGATTAAGCTATCTTCACTCAAAGAAGATAGTTCATCGTGATGTGAAGACTGAAAATATGCTCCTTGACAAATCAAGAACAGTGAAAATCGCTGATTTTGGTGTTGCACGAATTGAGGCTTCAAATCCTAGTGATATGACGGGTGAAACAGGCACACTTGGTTACATGGCACCCGAGGTTCTCAACGGCCATCCTTACAACAGGAAGTGTGATGTATATCGCTTTGGAATCTGCCTATGGGAGATATACTGCTGCGATATGCCGTATCCTGATCTGAGTTTCTCAGAGGTCACTTCAGCTGTTGTTCGTCAGAACTTGAGGCCTGAGATACCGCGCTGCTGCCCTAGCTCCTTGGCCAACGTGATGAAGCGCTGCTGGGACGCGAACCCGGACAAGCGGCCGGCGATGGCGGAGGTGGTGTCCATGCTGGAGGCGATCGACACGTCCAAGGGCGGTGGCATGATCCCGACCGACCAGCCACAGGGATGCTTCTCGTGCTTCGGTCGGCACCGAGGCCCCTGACGAACTTGATCTGATGGCGTCACTGATAATTTGTTATCGCTATATCTCAGTGTAATCTAATCGCATTCGCTATGGCTAATTTGAGGAGCTGTGTGATTGATGTAAATGCCTTAACGGTCCAGCACCTCAGCTTCATCGTCGTATGATCGCTGCGAATCCTAATGCTTGGCCTATGATAAGATCGAGCTTAGAAGAGATTATTGTGACAGAGCTGCCGACGAAGTTTACAATCTCATCATATATGGTCATGAAGTAGACCCACTGTACTATTGCAGTGTAATCGACATCTTTGCAGAATGTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12401#0 ACGACGCAGCAGCAGCGAGAAACGAACGTCGAAGAAGAAGAAGACGAGGGGGAAAAACCG 60
consensus_12401#1 ------------------------------------------------------------
consensus_12401#0 CGGAAAACCACGCGCCGCTGGGCGCGCGCTGGGCTGGGCCCCTCGCGCGCGACGCGACAC 120
consensus_12401#1 ----------------------TGCGCTCTCACATGGAGTCGTCGT-CGTCTCCCCAAAC 37
**** ** *** * *** ** * * * **
consensus_12401#0 GACACGACACGACACGACGGCACGAGCCCACCCCGTCTCCCTCCCGTCTCCCTCCCTTTT 180
consensus_12401#1 ACGACGACCTCGAACCGCCTC-CGTCCCCGCCTCG---CCAACCCGTCCCCTTCCCCTGT 93
***** ** * * ** *** ** ** ** ****** ** **** * *
consensus_12401#0 CCTCTCCCCGGCCGCTGCCTGCCTCGGCAGCCCATGTGCTCACA-TGCCACTCCGCCTCG 239
consensus_12401#1 AGCCACCGCGACCACCACC-ACCACCAC-GCCGCGGCATCCACAACGCCACCAGAGTACA 151
* ** ** ** * ** ** * * *** * **** ***** *
consensus_12401#0 CCACTCTCTTCCCCCCTCCTCCTCTCCTAGCCTAGCCTAGCCACTGCTCGCTCGCTTGCT 299
consensus_12401#1 GAGACGTTCCACCCACCCCGGGCCACCGAACCCAACCC--CCCCAGCTCGCTCGATCGAT 209
* *** * ** * ** * ** * ** ** * ********* * * *
consensus_12401#0 CACTTGCTCTGTTGCTCACCACCACCACCACCACCACACGGCGGGATGAAGGAGGGCGGC 359
consensus_12401#1 CGCTAGCTCCGACGACAGGTTTGAGCGCGATGAG-GCATCCCGGCGCGGGCGGCGGGAGC 268
* ** **** * * * * * * * ** *** * * ** **
consensus_12401#0 GGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTG 419
consensus_12401#1 GGGGACGCCGGGTTCGTCCGGGCGGACCAGATCGACCTCAAGAGCCTCGACGAGCAGCTG 328
** ** * ******** ***** *********************** ************
consensus_12401#0 GAGCGCCACCTGAGCCGCGC-GTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGA 478
consensus_12401#1 GAGCGCCACCTCGGCCGCCCCGCGGAGCGGGCCGCGTCGCAGCACGGGGGCAGCGGG-AG 387
*********** ***** * * *** * * * **** ** *** ** *
consensus_12401#0 CCAGCGTGGC-AGCAAGCC--GCCCGCGCTCGCCGCCG---CGCACTACTCGCAGAACCG 532
consensus_12401#1 CCGCCGCGGCGAGTCCGCCAGGCTCGGGCTCGGGGAGGAGCCGCCGCAGGCGCCGCACCA 447
** ** *** ** *** ** ** ***** * * *** * *** * ***
consensus_12401#0 CAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCAT 592
consensus_12401#1 TCAGCGGCGCCGGGAGGACTGGGAGATCGACCCCGCCAAGCTCGTCATCAGAGGCGTCAT 507
** *** ******* *************************** **** ** *****
consensus_12401#0 CGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGT 652
consensus_12401#1 CGCCCGCGGCACGTTCGGCACCGTCCACCGCGGCGTCTACGGCGGCCAGGACGTCGCTGT 567
************ **************************** ****** ******** **
consensus_12401#0 GAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAG 712
consensus_12401#1 CAAAATGCTTGACTGGGGGGAGGATGGCCATAGATCAGAACGAGAAATTTCTTCACTAAG 627
*** * *********** ******** ***** ** **** *** ** * *******
consensus_12401#0 AGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAA 772
consensus_12401#1 AGCAGCATTTGCACAAGAGGTCGCTGTCTGGCATAAGCTTGATCATCCAAATGTTACCAA 687
****** *** *********** **************** ** ************** **
consensus_12401#0 GTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCT 832
consensus_12401#1 GTTTATTGGGGCTATAATGGGTGCAAGAGATTTAAATATACAGACAGAACATGGACATTT 747
****** ************** ** ** *** ** **** ** ****** ****** *
consensus_12401#0 TGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAA 892
consensus_12401#1 TGGCATGCCAAGTAATATTTGCTGCGTTGTTGTCGAGTACCTTGCCGGAGGTGCACTGAA 807
** *************** ***** ******** *********** ** *** **** **
consensus_12401#0 AGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGC 952
consensus_12401#1 AAATTTTCTGATAAAGAACAGGAGAAGGAAGCTAGCCTATAAAGTTGTGGTCCAATTGGC 867
* ************** ******* **** **** * ************ ** * **
consensus_12401#0 TCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGT 1012
consensus_12401#1 TCTTGACCTTGCTAGGGGATTAAGCTATCTTCACTCAAAGAAGATAGTTCATCGTGATGT 927
************ ***** ***** ******************** ** ** ********
consensus_12401#0 AAAGACTGAAAATATGCTTCTTGACAAGACAAGAACTGTGAAAATTGCTGATTTTGGTGT 1072
consensus_12401#1 GAAGACTGAAAATATGCTCCTTGACAAATCAAGAACAGTGAAAATCGCTGATTTTGGTGT 987
***************** ******** ******* ******** **************
consensus_12401#0 TGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACAGGGGAAACAGGCACCCTTGGTTA 1132
consensus_12401#1 TGCACGAATTGAGGCTTCAAATCCTAGTGATATGACGGGTGAAACAGGCACACTTGGTTA 1047
*** ** **************** *********** ** *********** ********
consensus_12401#0 CATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTT 1192
consensus_12401#1 CATGGCACCCGAGGTTCTCAACGGCCATCCTTACAACAGGAAGTGTGATGTATATCGCTT 1107
****** ** *************** *** *********** ** ***** *** ****
consensus_12401#0 TGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTC 1252
consensus_12401#1 TGGAATCTGCCTATGGGAGATATACTGCTGCGATATGCCGTATCCTGATCTGAGTTTCTC 1167
*** ** ** ******************* ******** ***** *** **** *****
consensus_12401#0 AGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCC 1312
consensus_12401#1 AGAGGTCACTTCAGCTGTTGTTCGTCAGAACTTGAGGCCTGAGATACCGCGCTGCTGCCC 1227
********* ** ***************** ** *********** ** ******** **
consensus_12401#0 AAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGA 1372
consensus_12401#1 TAGCTCCTTGGCCAACGTGATGAAGCGCTGCTGGGACGCGAACCCGGACAAGCGGCCGGC 1287
** ** **** *********** *********** ******** ******** ** *
consensus_12401#0 GATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGAT 1432
consensus_12401#1 GATGGCGGAGGTGGTGTCCATGCTGGAGGCGATCGACACGTCCAAGGGCGGTGGCATGAT 1347
****** *********** *** ************* ** ** ***** ** ********
consensus_12401#0 CCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGACG 1492
consensus_12401#1 CCCGACCGACCAGCCACAGGGATGCTTCTCGTGCTTCGGTCGGCACCGAGGCCCCTGACG 1407
*** ** **** *** ****** * ** ****** * * * ** * ** ** *****
consensus_12401#0 GATGGAGCACGCTGGAGTTGTATCTGCAGATTGACGGCTACATCTC-GTGTAATTCGATT 1551
consensus_12401#1 AACTTGATCTGATGGCGTCACTGATAATTTGTTATCGCTATATCTCAGTGTAATCTAATC 1467
* * *** ** * * * **** ***** ******* **
consensus_12401#0 ACATTTGTTTTAAGGTACGTAAGCAAACTGGTTATGGAGCTAGCATGCTTAAGACCTTTG 1611
consensus_12401#1 GCATTCGCTATGGCTAATTTGAGGAGCTGTGTGATTGATGTAA-ATGCCTTAACGGTCCA 1526
**** * * * * * ** * ** ** ** ** **** * * *
consensus_12401#0 GTTTGTGTAGCCCTCTGATGTAAATTCCCTGTTCATCCCTTCTGTTTATCAATGA--AGA 1669
consensus_12401#1 GCACCTCAGCTTCATCGTCGTATGATCGCTGCGAATCCTAATGCTTGGCCTATGATAAGA 1586
* * * * *** ** *** **** ** * **** ***
consensus_12401#0 ACCAGCTCGGCTCG--TTCATCCAAAAAAAAAAAGGCCTGATGTAAATATTTCACCA-GT 1726
consensus_12401#1 TCGAGCTTAGAAGAGATTATTGTGACAGAGCTGCCGACGAAGTTTACAATCTCATCATAT 1646
* **** * ** * * * * * * * * * ** *** ** *
consensus_12401#0 ATCGAAGAGTAGTAG---CAATGAAGAGACCCCCAAAAA--GATACTATAAAAGA----- 1776
consensus_12401#1 ATGGTCATGAAGTAGACCCACTGTACTATTGCAGTGTAATCGACATCTTTGCAGAATGTT 1706
** * * ***** ** ** * * ** ** * * ***
consensus_12401#0 -
consensus_12401#1 A 1707
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||