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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12415#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2284 fasta sequence
[CTCTTAAATGAAGTTGAGTTTGGATTTGAGATTTGGTGAGAATGTATTTCATATCTACACCAATCTCTAGTAATTTTTTTTCATGAATTTACAAAACTTTTAGGTATGATTTTCACGAGTTTCCAACATTTAGATCATTTTCATCGATATGTCCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATAATTTTATTTTTTTGTGAAGTTTGTCATTGATGTTTGAGTGTTACTTTGAGTTAACAAACAATATGTTTGTGCAGTTGTTGAATCTATTTGTTGTATTACATTGGAGGCCGGAGAACTTCATTGCACCTAACAAATTGTTGGCCACACTTTGTTTGCCATGCCACACCTATGGCAAATTGAGTTGTGGCAATGTTAGGCAACAAACAAACAGACCCTAAGATTCTTAACATGGGACAAGCTTAGAGAGAAACGCAGGTGCATGATTGATCTTTCGGTGGTGTTGTAGCAACACTCATGTCAAGATTGCTTTGTTCGCTGATTTTTTTTTTTTTTGGTGTTACCCCCTTGATAATAACGCCACAAGTTTGGCATTAAAGGCTCACCTGGTTCCATCAAATTTGAGTAGTTGGGTTGACTGGTCAATGATTGTTTCATAAAATTAATAATGCACAACATGAAAGGAATTATATCATTTTTATAACTTGAATTTGCTGTTACCTAAGAATAATATGGCTGAGGAACTATGCTGGTTTCTAGTGTACATAGTTCATATTGGGTTAAATGGCCACAGTGCATATACACATAAGCAGATAATGTAGTCATTTATAGAAGACAATACAAGTGACACACCAATGTATATGTATTTTCATCCACAAGATCAGGGTTGTGGAACCTACCAGCACTAACAGATTCGGCATTTTAAGATTTGAGTGGTATTTCCTCTTGTCTCTTCCATGCCCTCTCTCCTCTGTCCCCTACTCCCCTTTGTTGAACTGGACTTGACTCGTGAGGATGGTCATAGTCAATGGTAAATATTGGTTCAATAAGTTACACCTGTGATGTTACCTGGATTTTTTATTTTGCGCTGGTCAATTTTCATTCTGTTTAATTGCTTTGCTCATTTGTAGTGTAAGTGTCCTTTCTAACACAGACGTGTCTGGTAACTGATAAAGGTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATTTTAAGCCAAACTGCATCTGTACGTCAGACGGTTATGTTCAGTGCTACATGGCCTCCTGCTGTCCACCAGCTAGCCCAAGAGTTTATGGATCCAAATCCAATAAAGGTTGTTATTGGATCAGAAGATCTTGCTGCTAACCATGATGTGATGCAAATTGTTGAAGTATTGGATGACAGGTCAAGGGATTCAAGATTAGTTGCTTTGCTCGATAAATACCATAAAGCACAGAGAAACAGGGTGTTGGTTTTTGTGTTGTACAAGAGAGAAGCTACGCGAGTAGAAACAATGTTACAAAGAAGGGGTTGGAGTGCTGTTTCTGTTCATGGAGATAAGGCACAGCATGACAGGACGAAAGCTTTATCTTTATTTAAAGAAGGGTCATGTCCTTTGATGATTGCCACTGATGTCGCATCCCGTGGACTTGATATTCCAGATGTCGAAGTTGTCATTAACTATAGCTATCCTTTGACTACAGAGGATTATGTCCACAGGATTGGGAGGACCGGTCGTGCTGGCAAGAAAGGTGTTGCACATACCTTCTTCACTCAAGAGAACAAGGGACTTGCTGGTGAACTTGTCAATGTTTTGCGGGAGGCTGGTCAGGTCGTTCCTCCTGCACTTACAAAATTTGGCACACACGTCAAGAAAAAGGAATCGCAAATATATGGATCTCATTTCAAAGAAATCAAAGCAGATGCTCCTAAATCAACAAAGATTACGTTTGGTGATTCTGATGAGGACTAGCAACATTTGCTGGTCTTTTCTTCGTTGCGTTCTGAAGTTTTGATGCTTGGAGTAGGCCAAATATTCGACAGCAAAATATTGCCTTTCTTGAAGGGAGAACCCCTCTAACAGTATCATTGTATACCTAGGTTAGTTTAGTATCAGTGATTTCCTACCTTGTCCAGACCATCTTATTTTATACTTGGTTGTATGTACTGCAATTTGCTTCTCTTGTGTTGGAAAAAACAGTAAAATCAGATATGTGCTAAGGCACCATTGGCAGTTCACAAAAGCAGTTTAGTCAAATAGAGGAATTTTTTTAAAAAGA]
[+] EMBL AK102570 [CTCTTAAATGAAGTTGAGTTTGGATTTGAGATTTGGTGAGAATGTATTTCATATCTACACCAATCTCTAGTAATTTTTTTTCATGAATTTACAAAACTTTTAGGTATGATTTTCACGAGTTTCCAACATTTAGATCATTTTCATCGATATGTCCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATAATTTTATTTTTTTGTGAAGTTTGTCATTGATGTTTGAGTGTTACTTTGAGTTAACAAACAATATGTTTGTGCAGTTGTTGAATCTATTTGTTGTATTACATTGGAGGCCGGAGAACTTCATTGCACCTAACAAATTGTTGGCCACACTTTGTTTGCCATGCCACACCTATGGCAAATTGAGTTGTGGCAATGTTAGGCAACAAACAAACAGACCCTAAGATTCTTAACATGGGACAAGCTTAGAGAGAAACGCAGGTGCATGATTGATCTTTCGGTGGTGTTGTAGCAACACTCATGTCAAGATTGCTTTGTTCGCTGATTTTTTTTTTTTTTGGTGTTACCCCCTTGATAATAACGCCACAAGTTTGGCATTAAAGGCTCACCTGGTTCCATCAAATTTGAGTAGTTGGGTTGACTGGTCAATGATTGTTTCATAAAATTAATAATGCACAACATGAAAGGAATTATATCATTTTTATAACTTGAATTTGCTGTTACCTAAGAATAATATGGCTGAGGAACTATGCTGGTTTCTAGTGTACATAGTTCATATTGGGTTAAATGGCCACAGTGCATATACACATAAGCAGATAATGTAGTCATTTATAGAAGACAATACAAGTGACACACCAATGTATATGTATTTTCATCCACAAGATCAGGGTTGTGGAACCTACCAGCACTAACAGATTCGGCATTTTAAGATTTGAGTGGTATTTCCTCTTGTCTCTTCCATGCCCTCTCTCCTCTGTCCCCTACTCCCCTTTGTTGAACTGGACTTGACTCGTGAGGATGGTCATAGTCAATGGTAAATATTGGTTCAATAAGTTACACCTGTGATGTTACCTGGATTTTTTATTTTGCGCTGGTCAATTTTCATTCTGTTTAATTGCTTTGCTCATTTGTAGTGTAAGTGTCCTTTCTAACACAGACGTGTCTGGTAACTGATAAAGGTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATTTTAAGCCAAACTGCATCTGTACGTCAGACGGTTATGTTCAGTGCTACATGGCCTCCTGCTGTCCACCAGCTAGCCCAAGAGTTTATGGATCCAAATCCAATAAAGGTTGTTATTGGATCAGAAGATCTTGCTGCTAACCATGATGTGATGCAAATTGTTGAAGTATTGGATGACAGGTCAAGGGATTCAAGATTAGTTGCTTTGCTCGATAAATACCATAAAGCACAGAGAAACAGGGTGTTGGTTTTTGTGTTGTACAAGAGAGAAGCTACGCGAGTAGAAACAATGTTACAAAGAAGGGGTTGGAGTGCTGTTTCTGTTCATGGAGATAAGGCACAGCATGACAGGACGAAAGCTTTATCTTTATTTAAAGAAGGGTCATGTCCTTTGATGATTGCCACTGATGTCGCATCCCGTGGACTTGATATTCCAGATGTCGAAGTTGTCATTAACTATAGCTATCCTTTGACTACAGAGGATTATGTCCACAGGATTGGGAGGACCGGTCGTGCTGGCAAGAAAGGTGTTGCACATACCTTCTTCACTCAAGAGAACAAGGGACTTGCTGGTGAACTTGTCAATGTTTTGCGGGAGGCTGGTCAGGTCGTTCCTCCTGCACTTACAAAATTTGGCACACACGTCAAGAAAAAGGAATCGCAAATATATGGATCTCATTTCAAAGAAATCAAAGCAGATGCTCCTAAATCAACAAAGATTACGTTTGGTGATTCTGATGAGGACTAGCAACATTTGCTGGTCTTTTCTTCGTTGCGTTCTGAAGTTTTGATGCTTGGAGTAGGCCAAATATTCGACAGCAAAATATTGCCTTTCTTGAAGGGAGAACCCCTCTAACAGTATCATTGTATACCTAGGTTAGTTTAGTATCAGTGATTTCCTACCTTGTCCAGACCATCTTATTTTATACTTGGTTGTATGTACTGCAATTTGCTTCTCTTGTGTTGGAAAAAACAGTAAAATCAGATATGTGCTAAGGCACCA ]
[+] EMBL CB669397 [ TATATCCTTTTTATAACTTGAATTTGCTGTTACCTAAGAATAATATGGCTGAGGAACTATGCTGGTTTCTAGTGTACATAGTTCATATTGGGTTAAATGGCCACAGTGCATATACACATAAGCAGATAATGTAGTCATTTATAGAAGACAATACAAGTGACACACCAATGTATATGTATTTTCATCCACAAGATCAGGGTTGTGGAACCTACCAGCACTAACAGATTCGGCATTTTAAGATTTGAGTGGTATTTCCTCTTGTCTCTTCCATGCCCTCTCTCCTCTGTCCCCTACTCCCCTTTGTTGAACTGGACTTGACTCGTGAGGATGGTCATAGTCAATGGTAAATATTGGTTCAATAAGTTACACCTGTGATGTTACCTGGATTTTTTATTTTGCGCTGGTCAATTTTCATTCTGTTTAATTGCTTTGCTCATTTGAAGTGTAAGTGTCCTTTCTAACACAGACGTGTCTGGTAACTGATAAAGGTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATTTTAAGCCAAACTGCATCTGTACGTCAGACGGTTATGTTCAGTGCTACATGGCCTCCTGCTGTCCACCAGCTAGCCCAAGAGTTTATGGATCCAAATCCAATAAAGGTTGTTATTGGATCAGAAGATCTTGCTGCTAACCATGATGTGATGCAAATTGTTGAAGTA ]
[-] EMBL CB669398 [ TAAATACCATAAAGCACAGAGAAACAGGGTGTTGGTTTTTGTGTTGTACAAGAGAGAAGCTACGCGAGTAGAAACAATGTTACAAAGAAGGGGTTGGAGTGCTGTTTCTGTTCATGGAGATAAGGCACAGCATGACAGGACGAAAGCTTTATCTTTATTTAAAGAAGGGTCATGTCCTTTGATGATTGCCACTGATGTCGCATCCCGTGGACTTGATATTCCAGATGTCGAAGTTGTCATTAACTATAGCTATCCTTTGACTACAGAGGATTATGTCCACAGGATTGGGAGGACCGGTCGTGCTGGCAAGAAAGGTGTTGCACATACCTTCTTCACTCAAGAGAACAAGGGACTTGCTGGTGAACTTGTCAATGTTTTGCGGGAGGCTGGTCAGGTCGTTCCTCCTGCACTTACAAAATTTGGCACACACGTCAAGAAAAAGGAATCGCAAATATATGGATCTCATTTCAAAGAAATCAAAGCAGATGCTCCTAAATCAACAAAGATTACGTTTGGTGATTCTGATGAGGACTAGCAACATTTGCTGGTCTTTTCTTCGTTGCGTTCTGAAGTTTTGATGCTTGGAGTAGGCCAAATATTCGACAGCAAAATATTGCCTTTCTTGAAGGGAGAACCCCTCTAACAGTATCATTGTATACCTAGGTTAGTTTAGTATCAGTGATTTCCTACCTTGTCCAGACCATCTTATTTTATACTTGGTTGTATGTACTGCAATTTGCTTCTCTTGTGTTGGAAAAAACAGTAAAATCAGATATGTGCTAAGGCACCATTGGCAGTTCACAAAAGCAGTTTAGTCAAATAGAGGAATTTTTTTAAAAAGA]
consensusID : consensus_12415#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1802 fasta sequence
[CACGTCCACGGATGAAGCGACGAAGAGCAGCAAGAAGAAGAGGGCCAAGGGCGATCTGGGCCAAGGAGAGGAGGCGGAGAACGGCGGTGGGAAGGTCGTGGCCGTGACCGGGAAGGGCTCCGCGGACGCCAAGTACGCCCCGCTGTCATCCTTCGCCGCCACCGCGCTTCCTCCCCAGGTGCTCGACTGCTGCAAGGGGTTCGAGCGTCCGTCGCCCATCCAAGCGTACGCCTGGCCTTACCTCCTCGACGGTCGTGACTTCATCGGCATCGCCGCCACCGGATCTGGGAAGACGATTGCGTTTGGTGTGCCGGCTCTGATGCACGTTAGGAGGAAAATGGGGGAGAAATCTGCTAAGAAGGGGGTGCCACGGGTCCTCGTGCTATCGCCAACGAGAGAGCTTGCTCAGCAGATCGCAGATGTACTTTGTGAAGCTGGTGCACCATGTGGGATAAGTTCAGTGTGCCTTTATGGTGGAACTTCCAAAGGACCACAAATTTCTGCCCTTAAATCTGGAGTGGATATTGTCATAGGGACACCTGGTCGTATGAAAGACCTTATTGAAATGGGTATTTGTCGTCTTAATGATGTTTCTTTTGTGGTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATTTTAAGCCAAACTGCATCTGTACGTCAGACGGTTATGTTCAGTGCTACATGGCCTCCTGCTGTCCACCAGCTAGCCCAAGAGTTTATGGATCCAAATCCAATAAAGGTTGTTATTGGATCAGAAGATCTTGCTGCTAACCATGATGTGATGCAAATTGTTGAAGTATTGGATGACAGGTCAAGGGATTCAAGATTAGTTGCTTTGCTCGATAAATACCATAAAGCACAGAGAAACAGGGTGTTGGTTTTTGTGTTGTACAAGAGAGAAGCTACGCGAGTAGAAACAATGTTACAAAGAAGGGGTTGGAGTGCTGTTTCTGTTCATGGAGATAAGGCACAGCATGACAGGACGAAAGCTTTATCTTTATTTAAAGAAGGGTCATGTCCTTTGATGATTGCCACTGATGTCGCATCCCGTGGACTTGATATTCCAGATGTCGAAGTTGTCATTAACTATAGCTATCCTTTGACTACAGAGGATTATGTCCACAGGATTGGGAGGACCGGTCGTGCTGGCAAGAAAGGTGTTGCACATACCTTCTTCACTCAAGAGAACAAGGGACTTGC-GGTGAACTTGTCAATGTTTTGCGGGAGGCTGGTCAGGTCGTTCCTCCTGCACTTACAAAATTTGGCACACACGTCAAGAAAAAGGAATCGCAAATATATGGATCTCGTTTCAAAGAAATCAAAGCAGATGCTCCTAAATCAACAAAGATTACGTTTGGTGATTCTGATGAGGACTAGCAACATTTGCTGGTCTTTTCTTCGTTGCGTTCTGAAGTTTTGATGCTTGGAGTAGGCCAAATATTCGACAGCAAAATATTGCCTTTCTTGAAGGGAGAACCCCTCTAACAGTATCATTGTATACCTAGGTTAGTTTAGTATCAGTGATTTCCTACCTTGTCCAGACCATCTTATTTTATACTTGGTTGTATGTACTGCAATTTGCTTCTCTTGTGTTGGAAAAAACAGTAAAATCAGATATGTGCTAAGGCACCATTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTTGTTTTCCCTTTCCTTACAAAGGGGCAAATTCCGGGCCGTAAAAT]
[+] EMBL AK073463 [CACGTCCACGGATGAAGCGACGAAGAGCAGCAAGAAGAAGAGGGCCAAGGGCGATCTGGGCCAAGGAGAGGAGGCGGAGAACGGCGGTGGGAAGGTCGTGGCCGTGACCGGGAAGGGCTCCGCGGACGCCAAGTACGCCCCGCTGTCATCCTTCGCCGCCACCGCGCTTCCTCCCCAGGTGCTCGACTGCTGCAAGGGGTTCGAGCGTCCGTCGCCCATCCAAGCGTACGCCTGGCCTTACCTCCTCGACGGTCGTGACTTCATCGGCATCGCCGCCACCGGATCTGGGAAGACGATTGCGTTTGGTGTGCCGGCTCTGATGCACGTTAGGAGGAAAATGGGGGAGAAATCTGCTAAGAAGGGGGTGCCACGGGTCCTCGTGCTATCGCCAACGAGAGAGCTTGCTCAGCAGATCGCAGATGTACTTTGTGAAGCTGGTGCACCATGTGGGATAAGTTCAGTGTGCCTTTATGGTGGAACTTCCAAAGGACCACAAATTTCTGCCCTTAAATCTGGAGTGGATATTGTCATAGGGACACCTGGTCGTATGAAAGACCTTATTGAAATGGGTATTTGTCGTCTTAATGATGTTTCTTTTGTGGTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATTTTAAGCCAAACTGCATCTGTACGTCAGACGGTTATGTTCAGTGCTACATGGCCTCCTGCTGTCCACCAGCTAGCCCAAGAGTTTATGGATCCAAATCCAATAAAGGTTGTTATTGGATCAGAAGATCTTGCTGCTAACCATGATGTGATGCAAATTGTTGAAGTATTGGATGACAGGTCAAGGGATTCAAGATTAGTTGCTTTGCTCGATAAATACCATAAAGCACAGAGAAACAGGGTGTTGGTTTTTGTGTTGTACAAGAGAGAAGCTACGCGAGTAGAAACAATGTTACAAAGAAGGGGTTGGAGTGCTGTTTCTGTTCATGGAGATAAGGCACAGCATGACAGGACGAAAGCTTTATCTTTATTTAAAGAAGGGTCATGTCCTTTGATGATTGCCACTGATGTCGCATCCCGTGGACTTGATATTCCAGATGTCGAAGTTGTCATTAACTATAGCTATCCTTTGACTACAGAGGATTATGTCCACAGGATTGGGAGGACCGGTCGTGCTGGCAAGAAAGGTGTTGCACATACCTTCTTCACTCAAGAGAACAAGGGACTTGC GGTGAACTTGTCAATGTTTTGCGGGAGGCTGGTCAGGTCGTTCCTCCTGCACTTACAAAATTTGGCACACACGTCAAGAAAAAGGAATCGCAAATATATGGATCTCGTTTCAAAGAAATCAAAGCAGATGCTCCTAAATCAACAAAGATTACGTTTGGTGATTCTGATGAGGACTAGCAACATTTGCTGGTCTTTTCTTCGTTGCGTTCTGAAGTTTTGATGCTTGGAGTAGGCCAAATATTCGACAGCAAAATATTGCCTTTCTTGAAGGGAGAACCCCTCTAACAGTATCATTGTATACCTAGGTTAGTTTAGTATCAGTGATTTCCTACCTTGTCCAGACCATCTTATTTTATACTTGGTTGTATGTACTGCAATTTGCTTCTCTTGTGTTGGAAAAAACAGTAAAATCAGATATGTG ]
[+] EMBL CB618061 [CACGTCCACGGATGAAGCGACGAAGAGCAGCAAGAAGAAGAGGGCCAAGGGCGATCTGGGCCAAGGAGAGGAGGCGGAGAACGGCGGTGGGAAGGTCGTGGCCGTGACCGGGAAGGGCTCCGCGGACGCCAAGTACGCCCCGCTGTCATCCTTCGCCGCCACCGCGCTTCCTCCCCAGGTGCTCGACTGCTGCAAGGGGTTCGAGCGTCCGTCGCCCATCCAAGCGTACGCCTGGCCTTACCTCCTCGACGGCCGTGACTTCATCGGCATCGCCGCCACCGGATCTGGGAAGACGATTGCGTTTGGTGTGCCGGCTCTGATGCACGTTAGGAGGAAAATGGGGGAGAAATCTGCTAAGAAGGGGGTGCCACGGGTCCTCGTGCTATCGCCAACGAGAGAGCTTGCTCAGCAGATCGCAGATGTACTTTGTGAAGCTGGTGCACCATGTGGGATAAGTTCAGTGTGCCTTTATGGTGGAACTTCCAAAGGACCACAAATTTCTGCCCTTAAATCTGGAGTGGATATTGTCATAGGGACACCTGGTCGTATGANAGACCTTATTGAAATGGGTATTTGTCGTCTTAATGATGTTTCTTTTGTGGTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATTTTAAGCCAAACTGCA ]
[+] EMBL CF324318 [ CGGGAAGGGCTCCGCGGACGCCAAGTACGCCCCGCTGTCATCCTTCGCCGCCACCGCGCTTCCTCCCCAGGTGCTCGACTGCTGCAAGGGGTTCGAGCGTCCGTCGCCCATCCAAGCGTACGCCTGGCCTTACCTCCTCGACGGTCGTGACTTCATCGGCATCGCCGCCACCGGATCTGGGAAGACGATTGCGTTTGGTGTGCCGGCTCTGATGCACGTTAGGAGGAAAATGGGGGAGAAATCTGCTAAGAAGGGGGTGCCACGGGTCCTCGTGCTATCGCCAACGAGAGAGCTTGCTCAGCAGATCGCAGATGTACTTTGTGAAGCTGGTGCACCATGTGGGATAAGTTCAGTGTGCCTTTATGGTGGAACTTCCAAAGGACCACAAATTTCTGCCCTTAAATCTGGAGTGGATATTGTCATAGGGACACCTGGTCGTATGAAAGACCTTATTGAAATGGGTATTTGTCGTCTTAATG ]
[+] EMBL AB110202 [ ACTGCTGCAAGGGGTTCGAGCGTCCGTCGCCCATCCAAGCGTACGCCTGGCCTTACCTCCTCGACGGTCGTGACTTCATCGGCATCGCCGCCACCGGATCTGGGAAGACGATTGCGTTTGGTGTGCCGGCTCTGATGCACGTTAGGAGGAAAATGGGGGAGAAATCTGCTAAGAAGGGGGTGCCACGGGTCCTCGTGCTATCGCCAACGAGAGAGCTTGCTCAGCAGATCGCAGATGTACTTTGTGAAGCTGGTGCACCATGTGGGATAAGTTCAGTGTGCCTTTATGGTGGAACTTCCAAAGGACCACAAATTTCTGCCCTTAAATCTGGAGTGGATATTGTCATAGGGACACCTGGTCGTATGAAAGACCTTATTGAAATGGGTATTTGTCGTCTTAATGATGTTTCTTTTGTGGTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATTTTAAGCCAAACTGCATCTGTACGTCAGACGGTTATGTTCAGTGCTACATGGCCTCCTGCTGTCCACCAGCTAGCCCAAGAGTTTATGGATCCAAATCCAATAAAGGTTGTTATTGGATCAGAAGATCTTGCTGCTAACCATGATGTGATGCAAATTGTTGAAGTATTGGATGACAGGTCAAGGGATTCAAGATTAGTTGCTTTGCTCGATAAATACCATAAAGCACAGAGAAACAGGGTGTTGGTTTTTGTGTTGTACAAGAGAGAAGCTACGCGAGTAGAAACAATGTTACAAAGAAGGGGTTGGAGTGCTGTTTCTGTTCATGGAGATAAGGCACAGCATGACAGGACGAAAGCTTTATCTTTATTTAAAGAAGGGTCATGTCCTTTGATGATTGCCACTGATGTCGCATCCCGTGGACTTGATATTCCAGATGTCGAAGTTGTCATTAACTATAGCTATCCTTTGACTACAGAGGATTATGTCCACAGGATTGGGAGGACCGGTCGTGCTGGCAAGAAAGGTGTTGCACATACCTTCTTCACTCAAGAGAACAAGGGACTTGCTGGTGAACTTGTCAATGTTTTGCGGGAGGCTGGTCAGGTCGTTCCTCCTGCACTTACAAAATTTGGCACACACGTCAAGAAAAAGGAATCGCAAATATATGGATCTCATTTCAAAGAAATCAAAGCAGATGCTCCTAAATCAACAAAGATTACGTTTGGTGATTCTGATGAGGACTAGCAACATTTGCTGGTCTTTTCTTCGTTGCGTTCTGAAGTTTTGATGCTTGGAGTAGGCCAAATATTCGACAGCAAAATATTGCCTTTCTTGAAGGGAGAACCCCTCTAACAGTATCATTGTATACCTAGGTTAGTTTAGTATCAGTGATTTCCTACCTTGTCCAGACCATCTTATTTTATACTTGGTTGTATGTACTGCAATTTGCTTCTCTTGTGTTGGAAAAAACAGTAAAATCAGATATGTGCTAAGGCACCA ]
[+] EMBL BP185085 [ ACTGCTGCAAGGGGTTCGAGCGTCCGTCGCCCATCCAAGCGTACGCCTGGCCTTACCTCCTCGACGGTCGTGACTTCATCGGCATCGCCGCCACCGGATCTGGGAAGACGATTGCGTTTGGTGTGCCGGCTCTGATGCACGTTAGGAGGAAAATGGGGGAGAAATCTGCTAAGAAGGGGGTGCCACGGGTCCTCGTGCTATCGCCAACGAGAGAGCTTGCTCAGCAGATCGCAGATGTACTTTGTGAAGCTGGTGCACCATGTGGGATAAGTTCAGTGTGCCTTTATGGTGGAACTTCCAAAGGACCACAAATTTCTGCCCTTAAATCTGGAGTGGATATTGTCATAGGGACACCTGGTCGTATGAAAGACCTTATTGAAATGGGTATTTGTCGTCTTAATGATGTTTCTTTTGTGGTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATTTTAAGCCAAACTGCATCTGTACGTCAGACGGTTATGTTCAGTGCTACATGGCCTCCTGCTGTCCA ]
[+] EMBL CA305626 [ AGAGAAGCTACGCGAGTAGAAACAATGTTACAAAGAAGGGGTTGGAGTGCTGTTTCTGTTCATGGAGATAAGGCACAGCATGACAGGACGAAAGCTTTATCTTTATTTAAAGAAGGGTCATGTCCTTTGATGATTGCCACTGATGTCGCATCCCGTGGACTTGATATTCCAGATGTCGAAGTTGCCATTAACTATAGCTATCCTTTGACTACAGAGGATTATGTCCACAGGATTGGGAGGACCGGNCGNGCTGGCAAGAAAGGTGNNGCACATACCTTCTTCACTCAAGAGAACAAGG ]
[+] EMBL CF316600 [ TCGACAGCAAAATATTGCCTTTCTTGAAGGGAGAACCCCTCTAACAGTATCATTGTATACCTAGGTTAGTTTAGTATCAGTGATTTCCTACCTTGTCCAGACCATCTTATTTTATACTTGGTTGTATGTACTGCAATTTGCTTCTCTTGTGTTGGAAAAAACAGTAAAATCAGATATGTGCTAAGGCACCATTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTTGTTTTCCCTTTCCTTACAAAGGGGCAAATTCCGGGCCGTAAAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12415#0 CTCTTAAATGAAGTTGAGTTTGGATTTGAGATTTGGTGAGAATGTATTTCATATCTACAC 60
consensus_12415#1 ------------------------------------------------------------
consensus_12415#0 CAATCTCTAGTAATTTTTTTTCATGAATTTACAAAACTTTTAGGTATGATTTTCACGAGT 120
consensus_12415#1 ------------------------------------------------------------
consensus_12415#0 TTCCAACATTTAGATCATTTTCATCGATATGTCCTCTCTCTCTCTCTCTCTCTCTCTATA 180
consensus_12415#1 ------------------------------------------------------------
consensus_12415#0 TATATATATATATATATATATATATATATATATATATATAATTTTATTTTTTTGTGAAGT 240
consensus_12415#1 ------------------------------------------------------------
consensus_12415#0 TTGTCATTGATGTTTGAGTGTTACTTTGAGTTAACAAACAATATGTTTGTGCAGTTGTTG 300
consensus_12415#1 ------------------------------------------------------------
consensus_12415#0 AATCTATTTGTTGTATTACATTGGAGGCCGGAGAACTTCATTGCACCTAACAAATTGTTG 360
consensus_12415#1 ------------------------------------------------------------
consensus_12415#0 GCCACACTTTGTTTGCCATGCCACACCTATGGCAAATTGAGTTGTGGCAATGTTAGGCAA 420
consensus_12415#1 ------------------------------------------------------------
consensus_12415#0 CAAACAAACAGACCCTAAGATTCTTAACATGGGACAAGCTTAGAGAGAAACGCAGGTGCA 480
consensus_12415#1 ------------------------------------------------------------
consensus_12415#0 TGATTGATCTTTCGGTGGTGTTGTAGCAACACTCATGTCAAGATTGCTTTGTTCGCTGAT 540
consensus_12415#1 ------------------------------------------------------------
consensus_12415#0 TTTTTTTTTTTTTGGTGTTACCCCCTTGATAATAACGCCACAAGTTTGGCATTAAAGGCT 600
consensus_12415#1 ------------------------------------------------------CACGTC 6
* *
consensus_12415#0 CACCTGGTTCCATCAAATTTGAGTAGTTGGGTTGACTGGTCAATGATTGTTTCATA--AA 658
consensus_12415#1 CAC--GGATGAAGCGACGAAGAGCAGCAAGAAGAAGAGGGCCAAGGGCGATCTGGGCCAA 64
*** ** * * * * *** ** * * ** * * * * * **
consensus_12415#0 ATTAATAATGCACAACATGAAAGGAATTATATCATTTTTATAACTTGAATTTGCTGTTAC 718
consensus_12415#1 GGAGAGGAGGCGGAGAACGGCGGTGGGAAGGTCGTGGCCGTGACCGGGAAGGGCT-CCGC 123
* * ** * * * * * ** * * ** * * *** *
consensus_12415#0 CTAAGAATAATATGGCTGAGGAACTATGCTGGTTTCTAGTGTACATAGTTCATATTGGGT 778
consensus_12415#1 GGACGCCAAGTACGCCCCGCTGTCATCCTTCGCCGCCACCGCGCTTCCTCCCCAG-GTGC 182
* * * ** * * * * * * * * * * * * * * *
consensus_12415#0 TAAATGGCCACAGTGCATATACACATAAGCAGATAATGTAGTCATTTATAGAAGACAATA 838
consensus_12415#1 TCGACTGCTGCAAGGGGTTCGAGCGTCCGTCGCCCATCCAAGCGTACGCCTGGCCTTACC 242
* * ** ** * * * * * * ** * * * *
consensus_12415#0 CAAGTGACA--CACCAATGTATATGTATTTTCATCCACAAGATCAGGGTTGTGGAACCTA 896
consensus_12415#1 TCCTCGACGGTCGTGACTTCATCGGCATCGCCG-CCACCGGATCTGGGAAGACGATTGCG 301
*** * * * ** * ** * **** **** *** * **
consensus_12415#0 CCAGCACTAACAGATTCG--GCATTTTAAGATTTGAGTGGTATTTCCTCTTGTCTCTTCC 954
consensus_12415#1 TTTGGTGTGCCGGCTCTGATGCACGTTAGGAGGAAAATGGGGGAGAAATCTGCTAAGAAG 361
* * * * * * *** *** ** * *** **
consensus_12415#0 ATGCCCTCTCTCCTCTGTCCCCTACTCCCCTTTGTTGAACTGGACTTGACTCGTGAGGAT 1014
consensus_12415#1 GGGGTGCCACGGGTCCTCGTGCTATCGCCAACGAGAGAGCTTGCTCAGCAGATCGCAGAT 421
* * * ** *** ** ** ** * * * ***
consensus_12415#0 GGTCATAGTCAA--TGGTAAA---TATTGGTTCAATAAGTTACACCT--GTGATGTTACC 1067
consensus_12415#1 GTACTTTGTGAAGCTGGTGCACCATGTGGGATAAGTTCAGTGTGCCTTTATGGTGGAACT 481
* * * ** ** **** * * * ** * * * * *** ** ** **
consensus_12415#0 T----GGATTTTTTATTTTGCGCTGGTCAATTTTCATTCTGTTTAATTGCTTTGCTCATT 1123
consensus_12415#1 TCCAAAGGACCACAAATTTCTGCCCTTAAATCTGGAGTGGATATTGTCATAGGGACACCT 541
* * * *** ** * *** * * * * * * * *
consensus_12415#0 TGTAGTGTAAGTGTCCTTTCTAACACAGACGTGTCTGGTA--ACTGATA--------AAG 1173
consensus_12415#1 GGTCGTATGAAAGACCTTATTGAAATGGGTATTTGTCGTCTTAATGATGTTTCTTTTGTG 601
** ** * * * **** * * * * * * * ** * **** *
consensus_12415#0 GTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATT 1233
consensus_12415#1 GTTCTAGATGAAGCTGATCGAATGCTGGATATGGGTTTTGAACCTGAAGTCAGAGCAATT 661
************************************************************
consensus_12415#0 TTAAGCCAAACTGCATCTGTACGTCAGACGGTTATGTTCAGTGCTACATGGCCTCCTGCT 1293
consensus_12415#1 TTAAGCCAAACTGCATCTGTACGTCAGACGGTTATGTTCAGTGCTACATGGCCTCCTGCT 721
************************************************************
consensus_12415#0 GTCCACCAGCTAGCCCAAGAGTTTATGGATCCAAATCCAATAAAGGTTGTTATTGGATCA 1353
consensus_12415#1 GTCCACCAGCTAGCCCAAGAGTTTATGGATCCAAATCCAATAAAGGTTGTTATTGGATCA 781
************************************************************
consensus_12415#0 GAAGATCTTGCTGCTAACCATGATGTGATGCAAATTGTTGAAGTATTGGATGACAGGTCA 1413
consensus_12415#1 GAAGATCTTGCTGCTAACCATGATGTGATGCAAATTGTTGAAGTATTGGATGACAGGTCA 841
************************************************************
consensus_12415#0 AGGGATTCAAGATTAGTTGCTTTGCTCGATAAATACCATAAAGCACAGAGAAACAGGGTG 1473
consensus_12415#1 AGGGATTCAAGATTAGTTGCTTTGCTCGATAAATACCATAAAGCACAGAGAAACAGGGTG 901
************************************************************
consensus_12415#0 TTGGTTTTTGTGTTGTACAAGAGAGAAGCTACGCGAGTAGAAACAATGTTACAAAGAAGG 1533
consensus_12415#1 TTGGTTTTTGTGTTGTACAAGAGAGAAGCTACGCGAGTAGAAACAATGTTACAAAGAAGG 961
************************************************************
consensus_12415#0 GGTTGGAGTGCTGTTTCTGTTCATGGAGATAAGGCACAGCATGACAGGACGAAAGCTTTA 1593
consensus_12415#1 GGTTGGAGTGCTGTTTCTGTTCATGGAGATAAGGCACAGCATGACAGGACGAAAGCTTTA 1021
************************************************************
consensus_12415#0 TCTTTATTTAAAGAAGGGTCATGTCCTTTGATGATTGCCACTGATGTCGCATCCCGTGGA 1653
consensus_12415#1 TCTTTATTTAAAGAAGGGTCATGTCCTTTGATGATTGCCACTGATGTCGCATCCCGTGGA 1081
************************************************************
consensus_12415#0 CTTGATATTCCAGATGTCGAAGTTGTCATTAACTATAGCTATCCTTTGACTACAGAGGAT 1713
consensus_12415#1 CTTGATATTCCAGATGTCGAAGTTGTCATTAACTATAGCTATCCTTTGACTACAGAGGAT 1141
************************************************************
consensus_12415#0 TATGTCCACAGGATTGGGAGGACCGGTCGTGCTGGCAAGAAAGGTGTTGCACATACCTTC 1773
consensus_12415#1 TATGTCCACAGGATTGGGAGGACCGGTCGTGCTGGCAAGAAAGGTGTTGCACATACCTTC 1201
************************************************************
consensus_12415#0 TTCACTCAAGAGAACAAGGGACTTGCTGGTGAACTTGTCAATGTTTTGCGGGAGGCTGGT 1833
consensus_12415#1 TTCACTCAAGAGAACAAGGGACTTGC-GGTGAACTTGTCAATGTTTTGCGGGAGGCTGGT 1260
************************** *********************************
consensus_12415#0 CAGGTCGTTCCTCCTGCACTTACAAAATTTGGCACACACGTCAAGAAAAAGGAATCGCAA 1893
consensus_12415#1 CAGGTCGTTCCTCCTGCACTTACAAAATTTGGCACACACGTCAAGAAAAAGGAATCGCAA 1320
************************************************************
consensus_12415#0 ATATATGGATCTCATTTCAAAGAAATCAAAGCAGATGCTCCTAAATCAACAAAGATTACG 1953
consensus_12415#1 ATATATGGATCTCGTTTCAAAGAAATCAAAGCAGATGCTCCTAAATCAACAAAGATTACG 1380
************* **********************************************
consensus_12415#0 TTTGGTGATTCTGATGAGGACTAGCAACATTTGCTGGTCTTTTCTTCGTTGCGTTCTGAA 2013
consensus_12415#1 TTTGGTGATTCTGATGAGGACTAGCAACATTTGCTGGTCTTTTCTTCGTTGCGTTCTGAA 1440
************************************************************
consensus_12415#0 GTTTTGATGCTTGGAGTAGGCCAAATATTCGACAGCAAAATATTGCCTTTCTTGAAGGGA 2073
consensus_12415#1 GTTTTGATGCTTGGAGTAGGCCAAATATTCGACAGCAAAATATTGCCTTTCTTGAAGGGA 1500
************************************************************
consensus_12415#0 GAACCCCTCTAACAGTATCATTGTATACCTAGGTTAGTTTAGTATCAGTGATTTCCTACC 2133
consensus_12415#1 GAACCCCTCTAACAGTATCATTGTATACCTAGGTTAGTTTAGTATCAGTGATTTCCTACC 1560
************************************************************
consensus_12415#0 TTGTCCAGACCATCTTATTTTATACTTGGTTGTATGTACTGCAATTTGCTTCTCTTGTGT 2193
consensus_12415#1 TTGTCCAGACCATCTTATTTTATACTTGGTTGTATGTACTGCAATTTGCTTCTCTTGTGT 1620
************************************************************
consensus_12415#0 TGGAAAAAACAGTAAAATCAGATATGTGCTAAGGCACCATTGGCAGTTCACAAAAGCAGT 2253
consensus_12415#1 TGGAAAAAACAGTAAAATCAGATATGTGCTAAGGCACCATTGGCAAAAAAAAAAAAAAAA 1680
********************************************* * **** *
consensus_12415#0 TTAGTCAAATAGAGGAATTTTTTTAAAAAGA----------------------------- 2284
consensus_12415#1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1740
* *** * * ** ***** *
consensus_12415#0 ------------------------------------------------------------
consensus_12415#1 AAAAAAAAAAAACCCCTTGTTTTCCCTTTCCTTACAAAGGGGCAAATTCCGGGCCGTAAA 1800
consensus_12415#0 --
consensus_12415#1 AT 1802
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||