cluster # 12439

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Oryza sativa
cluster # 12439 cluster # 12439 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12439#0 length = 1431 sequences # 5

consensus_12439#1 length = 1168 sequences # 4
consensus_12439#2 length = 388 sequences # 1

consensusID : consensus_12439#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1431
fasta sequence

                              [AAACAAAATGTCCAAGTTTCTCTAAAAGCAACCACTTACATATAAATAATGAGTTAGAAACACTTTTGGTAACCTGCTCCTATTATATAACCTCAGTACCTAACGATGTAAATTAAAGGTTACATGGTCCATCCTTGATAGTAGTATGATACGCTTATACAATTTTCGAATGACATGTAACCTAACCATCTGAAGGAAATACTTATATATATATTTTTAATTCTTGATGACTTCCAGAATCATGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAGTGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATCAGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATTCCTTGGAAACTGCAGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATAGCTCGCTGGGGACAGCCTAATGAACCATACAATTTCTGGGACACACCAAATTGGTATACAGAGGAGGAAATTGAATACAGGACCTATCAAACATGCCAGTTCAATTCCACTCCACAAGAAGCTTTGACGATTGCTCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCAAGGATGCACTGGCCAGGGCTAGAGCCTTTGATGAGTCCCATCAGGTAACAGCGACTGCCGCAGCCAAGGCTGCGGAGCTGAGCAAGAGGATTGGCCTAACCGACAGGGTCAGCGGCCTAACCGACAGGGTCAGCGCCGGTGTTGGTGCAATCAGATCGGTGGATGAGACATACCACGTATCCGAGACGACCAAGACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAGCAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGCAGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACATATATTGTCAGTTATTCAGACATCAGGATGAACACCCAAATATGGAGTACTTGACATGATGCCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCTACAAAGACTGAAGGAAATGTGTGCAGAACAATGTAAAGTATTTCAAACCGAGTCAAGTGATCGTGCAGTCATGTTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCATTCTTATTCTTTTAGGCCTTATCCTGCAGAACTATTGATCTTCCCACGTCGAATGCTGGAACATAAAAATAAATTCTGCCTTTGAATGGCAACGATAAAATATTGAGCTGAAAAAATAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB651948             [AAACAAAATGTCCAAGTTTCTCTAAAAGCAACCACTTACATATAAATAATGAGTTAGAAACACTTTTGGTAACCTGCTCCTATTATATAACCTCAGTACCTAACGATGTAAATTAAAGGTTACATGGTCCATCCTTGATAGTAGTATGATACGCTTATACAATTTTCGAATGACATGTAACCTAACCATCTGAAGGAAATACTTATATATATATTTTTAATTCTTGATGACTTCCAGAATCATGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAGTGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATCAGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATTCCTTGGAAACTGCAGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATAGCTCGCTGGGGACAGCCTAATGAACCATACAATTTCTGGGACACACCAAATTGGTATACAGAGGAGGAAATTGAATACAGGACCTATCAAACATGCCAGTTCAATTCCACTCCACAAGAAGCTTTGACGATTGCTCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK059892             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTATTGTGGATCAGCCAGTTTGTATAGCTCGCTGGGGACAGCCTAATGAACCATACAATTTCTGGGACACACCAAATTGGTATACAGAGGAGGAAATTGAATACAGGACCTATCAAACATGCCAGTTCAATTCCACTCCACAAGAAGCTTTGACGATTGCTCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCAAGGATGCACTGGCCAGGGCTAGAGCCTTTGATGAGTCCCATCAGGTAACAGCGACTGCCGCAGCCAAGGCTGCGGAGCTGAGCAAGAGGATTGGCCTAACCGACAGGGTCAGCGGCCTAACCGACAGGGTCAGCGCCGGTGTTGGTGCAATCAGATCGGTGGATGAGACATACCACGTATCCGAGACGACCAAGACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAGCAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGCAGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACATATATTGTCAGTTATTCAGACATCAGGATGAACACCCAAATATGGAGTACTTGACATGATGCCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCTACAAAGACTGAAGGAAATGTGTGCAGAACAATGTAAAGTATTTCAAACCGAGTCAAGTGATCGTGCAGTCATGTTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCATTCTTATTCTTTTAGGCCTTATCCTGCAGAACTATTGATCTTCCCACGTCGAATGCTGGAACATAAAAATAAATTCTGCCTTTGAATGGCAACGATAAAA                                                                                    ]
[+] EMBL OSAA31856            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTGAATACAGGACCTATCAAACATGCCACTTCAATTCCACTCCACAAGAAGCTTTGACGATTGCTCAGGATGTTGTGAANACTATGCTAGCAAGGGGATACGTACTCACCAAGGATGCACTGGTCAGGGCTATA CCTTTGATGAGTCCCATCNCGTAACAGCGACTGCCGCACCCAANGCTGCGGAGCTGA CAANAAGATTGGCCTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB629425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTCCACTCCACAAGAAGCTTTGACGATTGCTCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCAAGGATGCACTGGCCAGGGCTAGAGCCTTTGATGAGTCCCATCAGGTAACAGCGACTGCCGCAGCCAAGGCTGCGGAGCTGAGCAAGAGGATTGGCCTAACCGACAGGGTCAGCGGCCTAACCGACAGGGTCAGCGCCGGTGTTGGTGCAATCAGATCGGTGGATGAGACATACCACGTATCCGAGACGACCAAGACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAGCAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGCAGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACATATATTGTCAGTTATTCAGACATCAGGATGAACACCCAAATATGGAGTACTTGACATGATGCCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCTACAAAGACTGAAGGAAATGTGTGCAGAACAATGTAAAGTATTTCAAACCGAGTCAAGTGATCGTGCAGTCATGTTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCATTCTTATTCTTTTAGGCCTTATCCTGCAGAACTATTGATCTTCCCACGTCGAATGCTGGAACATAAAAATAAATTCTACGTTTGAATGGCAACGATAAAATATTGAGCTGAAAAAATAAGGA                                                              ]
[+] EMBL CF320681             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGATGCCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCTACAAAGACTGAAGGAAATGTGTGCAGAACAATGTAAAGTATTTCAAACCGAGTCAAGTGATCGTGCAGTCATGTTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCATTCTTATTCTTTTAGGCCTTATCCTGCAGAACTATTGATCTTCCCACGTCGAATGCTGGAACATAAAAATAAATTCTGCCTTTGAATGGCAACGATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12439#0
AAACAAAATGTCCAAGTTTCTCTAAAAGCAACCACTTACATATAAATAATGAGTTAGAAA
CACTTTTGGTAACCTGCTCCTATTATATAACCTCAGTACCTAACGATGTAAATTAAAGGT
TACATGGTCCATCCTTGATAGTAGTATGATACGCTTATACAATTTTCGAATGACATGTAA
CCTAACCATCTGAAGGAAATACTTATATATATATTTTTAATTCTTGATGACTTCCAGAAT
CATGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAG
TGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATC
AGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATTCCTTGGAAACTGC
AGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATAGCTCGCTGGGGACA
GCCTAATGAACCATACAATTTCTGGGACACACCAAATTGGTATACAGAGGAGGAAATTGA
ATACAGGACCTATCAAACATGCCAGTTCAATTCCACTCCACAAGAAGCTTTGACGATTGC
TCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCAAGGATGCACTGGC
CAGGGCTAGAGCCTTTGATGAGTCCCATCAGGTAACAGCGACTGCCGCAGCCAAGGCTGC
GGAGCTGAGCAAGAGGATTGGCCTAACCGACAGGGTCAGCGGCCTAACCGACAGGGTCAG
CGCCGGTGTTGGTGCAATCAGATCGGTGGATGAGACATACCACGTATCCGAGACGACCAA
GACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAG
CAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGC
AGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACAT
ATATTGTCAGTTATTCAGACATCAGGATGAACACCCAAATATGGAGTACTTGACATGATG
CCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCTACAAAGACTGAAG
GAAATGTGTGCAGAACAATGTAAAGTATTTCAAACCGAGTCAAGTGATCGTGCAGTCATG
TTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCATTCTTATTCTTTT
AGGCCTTATCCTGCAGAACTATTGATCTTCCCACGTCGAATGCTGGAACATAAAAATAAA
TTCTGCCTTTGAATGGCAACGATAAAATATTGAGCTGAAAAAATAAGGAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12439#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1168
fasta sequence

                              [TTCCTCGAGCACTGTTGGCCTACTGGGTGCGCTGGTGCGGGTGGGTGGCCTTCAAACCTAGCCCCCGTGTGGTTGCAGCGGAGCAGGAAGGGGAAGTCGGGGGAAAACCGAGAAGAATTCAAGGAAGGGGAATCA-TGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAGTGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATCAGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATTCCTTGGAAACTGCAGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATA-GCTCGCTGGGGACAGCCTAATGAACCATACAA-TTTCTGGGACACACCAAATT-GGTATACA-GAGGAGGAAATTGAATACAGGACCTATCAAACA-TGCCAGTTCAA-TTCCACTCCACAAGAAGCTTTGACGATTGCTCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCAAGGATGCACTGGCCAGGGCTAGAGCCTTTGATGAGTCCCATCAGGTAACAGCGACTGCCGCAGCCAAGGCTGCGGAGCTGAGCAAGAGGATTGGCCTAACCGACAGGGTCAGCGGCCTAACCGACAGGGTCAGCGCCGGTGTTGGTGCAATCAGATCGGTGGATGAGACATACCACGTATCCGAGACGACCAAGACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAGCAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGCAGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACATATATTGTCAGTTATTCAGACATCAGGATGAACACCCAAATATGGAGTACTTGACATGATGCCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCTACAAAGACTGAAGGAAATGTGTGCAGAACAATGTAAAGTATTTCAAACCGAGTCAAGTGATCGTGCAGTCATGTTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCAAAAAAAAAAAAAAAAAAAAAGGCCACAT]

[+] EMBL AK109401             [TTCCTCGAGCACTGTTGGCCTACTGGGTGCGCTGGTGCGGGTGGGTGGCCTTCAAACCTAGCCCCCGTGTGGTTGCAGCGGAGCAGGAAGGGGAAGTCGGGGGAAAACCGAGAAGAATTCAAGGAAGGGGAATCA TGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAGTGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATCAGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATTCCTTGGAAACTGCAGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATA GCTCGCTGGGGACAGCCTAATGAACCATACAA TTTCTGGGACACACCAAATT GGTATACA GAGGAGGAAATTGAATACAGGACCTATCAAACA TGCCAGTTCAA TTCCACTCCACAAGAAGCTTTGACGATTGCTCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCAAGGATGCACTGGCCAGGGCTAGAGCCTTTGATGAGTCCCATCAGGTAACAGCGACTGCCGCAGCCAAGGCTGCGGAGCTGAGCAAGAGGATTGGCCTAACCGACAGGGTCAGCGGCCTAACCGACAGGGTCAGCGCCGGTGTTGGTGCAATCAGATCGGTGGATGAGACATACCACGTATCCGAGACGACCAAGACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAGCAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGCAGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACATATATTGTCAGTTATTCAGACATCAGGATGAACACCCAAATATGGAGTACTTGACATGATGCCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCTACAAAGACTGAAGGAAATGTGTGCAGAACAATGTAAAGTATTTCAAACCGAGTCAAGTGATCGTGCAGTCATGTTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AK062620             [                        ctGTGCGCTGGTGCGGGTGGGTGGCCTTCAAACCTAGCCCCCGTGTGGTTGCAGCGGAGCAGGAAGGGGAAGTCGGGGGAAAACCGAGAAGAATTCAA       GAATCA TGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAGTGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATCAGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATTCCTTGGAAACTGCAGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATA GCTCGCTGGGGACAGCCTAATGAACCATACAA TTTCTGGGACACACCAAATT GGTATACA GAGGAGGAAATTGAATACAGGACCTATCAAACA TGCCAGTTCAA TTCCACTCCACAAGAAGCTTTGACGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OSS12635A            [                                                                                           ccgAGTCGGGGGAAAACCGAGAAGAATTCAAGGAAGGGGAATCA TGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAGTGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATCAGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATTCCTTGGAAACTGCAGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATA GCTCGCTGGGGACAGCCTAATGAACCATACAA TTTCTGGGNCACACCAAATT GGTATACA GAGGNGGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU197905             [                                                                                                       AAAACCGAGAAGAATTCAAGGAAGGGGAATCATTGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAGTGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATCAGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGANCCCTATTCCTTGGAAACTGCAGTATTGCTCANTGGGGCTACTATTGTGGATCAGCCAGTTTGTATAGGCTCGCTGGGGACAGCCTAATGAACCATACAATTTTCTGGGACACACCAAATTGGGTATACANGAGGAGGAAATTGAATACNGGACCTATCAAACATTGCCAGTTCAATTTCCACTCCACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_12439#1
TTCCTCGAGCACTGTTGGCCTACTGGGTGCGCTGGTGCGGGTGGGTGGCCTTCAAACCTA
GCCCCCGTGTGGTTGCAGCGGAGCAGGAAGGGGAAGTCGGGGGAAAACCGAGAAGAATTC
AAGGAAGGGGAATCATGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCA
GGGCATCTGAAAGTGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAG
AACTTATCAGATCAGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATT
CCTTGGAAACTGCAGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATAG
CTCGCTGGGGACAGCCTAATGAACCATACAATTTCTGGGACACACCAAATTGGTATACAG
AGGAGGAAATTGAATACAGGACCTATCAAACATGCCAGTTCAATTCCACTCCACAAGAAG
CTTTGACGATTGCTCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCA
AGGATGCACTGGCCAGGGCTAGAGCCTTTGATGAGTCCCATCAGGTAACAGCGACTGCCG
CAGCCAAGGCTGCGGAGCTGAGCAAGAGGATTGGCCTAACCGACAGGGTCAGCGGCCTAA
CCGACAGGGTCAGCGCCGGTGTTGGTGCAATCAGATCGGTGGATGAGACATACCACGTAT
CCGAGACGACCAAGACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATG
GCATCATGACCAGCAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATA
GGGCAGCACAGGCAGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAA
ACACCCGGTACATATATTGTCAGTTATTCAGACATCAGGATGAACACCCAAATATGGAGT
ACTTGACATGATGCCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCT
ACAAAGACTGAAGGAAATGTGTGCAGAACAATGTAAAGTATTTCAAACCGAGTCAAGTGA
TCGTGCAGTCATGTTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCA
AAAAAAAAAAAAAAAAAAAAGGCCACAT

consensusID : consensus_12439#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 388
fasta sequence

                              [CGACCAAGACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAGCAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGCAGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACATATATTGTCAGTTATTCAGACATCAGCATGAATATAAAACGAGCAGAAACTGTTAAACATGACTGCACGATCACTTGACTCGGTTTGAAATACTTTACATTGTTCTGCACACATTTCCTTCAGTCTTTGTAGGTACAGTTGTTACCGGTTTCACCGTTATTATCATACTTGGAACGGCATCATGTCAAGTACTCCATATTTG]

[-] EMBL OSAA31865            [CGACCAAGACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAGCAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGCAGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACATATATTGTCAGTTATTCAGACATCAGCATGAATATAAAACGAGCAGAAACTGTTAAACATGACTGCACGATCACTTGACTCGGTTTGAAATACTTTACATTGTTCTGCACACATTTCCTTCAGTCTTTGTAGGTACAGTTGTTACCGGTTTCACCGTTATTATCATACTTGGAACGGCATCATGTCAAGTACTCCATATTTG]




>consensus_12439#2
CGACCAAGACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCA
TGACCAGCAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAG
CACAGGCAGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCC
GGTACATATATTGTCAGTTATTCAGACATCAGCATGAATATAAAACGAGCAGAAACTGTT
AAACATGACTGCACGATCACTTGACTCGGTTTGAAATACTTTACATTGTTCTGCACACAT
TTCCTTCAGTCTTTGTAGGTACAGTTGTTACCGGTTTCACCGTTATTATCATACTTGGAA
CGGCATCATGTCAAGTACTCCATATTTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12439#0      AAACAAAATGTCCAAGTTTCTCTAAAAGCAACCACTTACATATAAATAATGAGTTAGAAA 60
consensus_12439#1      ------------------------------------------------------------
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      CACTTTTGGTAACCTGCTCCTATTATATAACCTCAGTACCTAACGATGTAAATTAAAGGT 120
consensus_12439#1      ------------------------------------TTCCT--CGAGCACTGTT--GGCC 20
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      TACATGGTCCATCCTTGATAGTAGTATGATACGCTTATACAATTTTCGAATGACATGTAA 180
consensus_12439#1      TACTGGGTGCGCTGGTGCGGGTGG-GTGGCCTTCAAACCTAGCCCCCGTGTGGT-TGCAG 78
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      CCTAACCATCTGAAGGAAATACTTATATATATATTTTTAATTCTTGATGACTTCCAGAAT 240
consensus_12439#1      CGGAGCAG---GAAGGGGAAGTCGGGGGAAAACCGAGAAGAATTCAAGGAAGG--GGAAT 133
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      CATGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAG 300
consensus_12439#1      CATGAGTGGTACGGGATACACAGTTGAAGTTACTAACCTGTCAAGCAGGGCATCTGAAAG 193
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      TGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATC 360
consensus_12439#1      TGATCTTCATGAGTTCTTTTCATTCTCTGGAGCGATTGAGCATATAGAACTTATCAGATC 253
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      AGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATTCCTTGGAAACTGC 420
consensus_12439#1      AGGAGAATATGGTTCTACTGCTTATGTGACATTCAAGGAACCCTATTCCTTGGAAACTGC 313
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      AGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATAGCTCGCTGGGGACA 480
consensus_12439#1      AGTATTGCTCAGTGGGGCTACTATTGTGGATCAGCCAGTTTGTATAGCTCGCTGGGGACA 373
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      GCCTAATGAACCATACAATTTCTGGGACACACCAAATTGGTATACAGAGGAGGAAATTGA 540
consensus_12439#1      GCCTAATGAACCATACAATTTCTGGGACACACCAAATTGGTATACAGAGGAGGAAATTGA 433
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      ATACAGGACCTATCAAACATGCCAGTTCAATTCCACTCCACAAGAAGCTTTGACGATTGC 600
consensus_12439#1      ATACAGGACCTATCAAACATGCCAGTTCAATTCCACTCCACAAGAAGCTTTGACGATTGC 493
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      TCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCAAGGATGCACTGGC 660
consensus_12439#1      TCAGGATGTTGTGAAGACAATGCTAGCAAGGGGATACGTACTCAGCAAGGATGCACTGGC 553
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      CAGGGCTAGAGCCTTTGATGAGTCCCATCAGGTAACAGCGACTGCCGCAGCCAAGGCTGC 720
consensus_12439#1      CAGGGCTAGAGCCTTTGATGAGTCCCATCAGGTAACAGCGACTGCCGCAGCCAAGGCTGC 613
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      GGAGCTGAGCAAGAGGATTGGCCTAACCGACAGGGTCAGCGGCCTAACCGACAGGGTCAG 780
consensus_12439#1      GGAGCTGAGCAAGAGGATTGGCCTAACCGACAGGGTCAGCGGCCTAACCGACAGGGTCAG 673
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      CGCCGGTGTTGGTGCAATCAGATCGGTGGATGAGACATACCACGTATCCGAGACGACCAA 840
consensus_12439#1      CGCCGGTGTTGGTGCAATCAGATCGGTGGATGAGACATACCACGTATCCGAGACGACCAA 733
consensus_12439#2      -----------------------------------------------------CGACCAA 7
                                                                            *******

consensus_12439#0      GACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAG 900
consensus_12439#1      GACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAG 793
consensus_12439#2      GACCGTCGCCACCGCCACAGGAAGAACAGCAGTTAAGGTTGTGAATGGCATCATGACCAG 67
                       ************************************************************

consensus_12439#0      CAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGC 960
consensus_12439#1      CAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGC 853
consensus_12439#2      CAGCTATTTCTCTGCAGGAGCTATGATGCTGTCTGATGCTCTCCATAGGGCAGCACAGGC 127
                       ************************************************************

consensus_12439#0      AGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACAT 1020
consensus_12439#1      AGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACAT 913
consensus_12439#2      AGCAGCTGATTTGGCTGCTCATGGTAGACACAATTAAGTGAAAATAAACACCCGGTACAT 187
                       ************************************************************

consensus_12439#0      ATATTGTCAGTTATTCAGACATCAGGATGAACACCCAAATATGGAGTACTTGACATG-AT 1079
consensus_12439#1      ATATTGTCAGTTATTCAGACATCAGGATGAACACCCAAATATGGAGTACTTGACATG-AT 972
consensus_12439#2      ATATTGTCAGTTATTCAGACATCAGCATGAATATA-AAACGAGCAGAAACTGTTAAACAT 246
                       ************************* ***** *   ***   * ** *  **  *   **

consensus_12439#0      GCCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCTACAAAGACTGAA 1139
consensus_12439#1      GCCGTTCCAAGTATGATAATAACGGTGAAACCGGTAACAACTGTACCTACAAAGACTGAA 1032
consensus_12439#2      GACTGCACGATCACTTGACTCGGTTTGAAATACTTTACA-TTGT-TCTGCACACATTTCC 304
                       * *    * *  *    * *     *****    * ***  ***  ** ** * * *   

consensus_12439#0      GGAAATGTGTGCAGA-ACAAT-GTAAAGTATTTCAAACCGAGTCAAGTGATCG---TGCA 1194
consensus_12439#1      GGAAATGTGTGCAGA-ACAAT-GTAAAGTATTTCAAACCGAGTCAAGTGATCG---TGCA 1087
consensus_12439#2      TTCAGTCTTTGTAGGTACAGTTGTTACCGGTTTCACCGTTATTATCATACTTGGAACGGC 364
                          * * * ** **  *** * ** *    *****     * *    *  * *    *  

consensus_12439#0      GTCATGTTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCATTCTTAT 1254
consensus_12439#1      GTCATGTTTAACAGTTTCTGCTCGTTTTATATTCATGCTGATAGCATCCTTCAAAAA-AA 1146
consensus_12439#2      ATCATGTCAAGTACTCCATATTTG------------------------------------ 388
                        ******  *  * *   *  * *                                    

consensus_12439#0      TCTTTTAGGCCTTATCCTGCAGAACTATTGATCTTCCCACGTCGAATGCTGGAACATAAA 1314
consensus_12439#1      AAAAAAAAAAAAAAGGCCACAT-------------------------------------- 1168
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      AATAAATTCTGCCTTTGAATGGCAACGATAAAATATTGAGCTGAAAAAATAAGGAAAAAA 1374
consensus_12439#1      ------------------------------------------------------------
consensus_12439#2      ------------------------------------------------------------
                                                                                   

consensus_12439#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1431
consensus_12439#1      ---------------------------------------------------------
consensus_12439#2      ---------------------------------------------------------