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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12441#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1680 fasta sequence
[TCACATCGCCAGCTCGTCCGCTTGCCCCGCACCGCAACCGCGG-CGCGGAGGAGGAGAGCTCTCGCGCCGCGCGTGCGCGCGCGCGTGCGG-GCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTGCTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCTCCGCGGCGCACGCCAACGGCGGCGCCG-ACCTGGCCGTCTTCGAGCAGTTCGAGCGGCT-GGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCC-TACTTCCTTCTTTTGAATCT-GCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTC-AAAGGTCT-GCTATCACCTTGGAAAGGTAT-ATTGC-TTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTACATTTGTACTGGGTNCCNCCAAAAAAAAAA]
[+] EMBL AK069899 [TCACATCGCCAGCTCGTCCGCTTGCCCCGCACCGCAACCGCGG CGCGGAGGAGGAGAGCTCTCGCGCCGCGCGTGCGCGCGCGCGTGCGG GCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTGCTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCTCCGCGGCGCACGCCAACGGCGGCGCCG ACCTGGCCGTCTTCGAGCAGTTCGAGCGGCT GGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCC TACTTCCTTCTTTTGAATCT GCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTC AAAGGTCT GCTATCACCTTGGAAAGGTAT ATTGC TTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGGATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTACATTTGT ]
[+] EMBL AU091713 [ TCGTCCGCTTGCCCCGCACCGCAACCGCGGACGC GAGGAGGAGAGCTCTCGCGCCGCGCGTGCGNCCGCGATNACGGNGCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTACTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACG GCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCTCCGCGGCGCACGCCAACGG GGCGCCGAACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGGGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTTACTTCCTTCTTTTGAATCTGGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTNAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAAGGTCTGGCTATNACCTTGGAAAGGTATAATTGCTTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAANACAAC ]
[+] EMBL AK062045 [ TAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGCCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGA ]
[+] EMBL AU055909 [ GAGAAACGTATTC TGGTCCCTTCCCAGAGCAAGAAGCTA ACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTACATTTGTACTGGGTNCCNCCAAAAAAAAAA]
consensusID : consensus_12441#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1626 fasta sequence
[GCTCGTCCGCTTGCCCCGCACCGCAACCGCGGCGCGGAGGAGGAGAGCTCTCGCGCCGCGCGTGCGCGCGCGCGTGCGGGCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTACTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCACCCGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTACTTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTATCACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGG-AGAAACGTATTCTTGTTCCC-TTACCAGAGCAAG-AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATAAAAGAAAAAAAAAAAAACTCGAG]
[+] EMBL AK065017 [GCTCGTCCGCTTGCCCCGCACCGCAACCGCGGCGCGGAGGAGGAGAGCTCTCGCGCCGCGCGTGCGCGCGCGCGTGCGGGCGTGCGCGGGCGATCGAATCCGATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTACTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCACCCGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTACTTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTATCACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGG AGAAACGTATTCTTGTTCCC TTACCAGAGCAAG AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGA ]
[+] EMBL C73417 [ GCAATGTTGCGCCGTTTGG AGAAACGTATTCTTGTTCCC TTACCAGAGCAAG AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTC ]
[+] EMBL AU165692 [ TTGCNCCGTTTGGAAGAAACGTATTCNTGGTCCCNTTACCAGAGCAAGAAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAAAAAAA ]
[-] EMBL CF196525 [ nGGCACAATGANTATCCCATATGATNNNNNNGTGGAGAAANNNGNAGGATATTCANNNNNNGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTNCNTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATAAAAAAAAAAAAAAAAAACTCGAG]
[-] EMBL D43392 [ ACAACATAGATTGCTGAATTNCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTG ]
consensusID : consensus_12441#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence
[AGGACGAGACAAGGGGGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCGTATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTCCAAAAAAAAAAAAA]
[-] EMBL CA762989 [AGGACGAGACAAGGGGGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCGTATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTCCAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12441#0 TCACATCGCCAGCTCGTCCGCTTGCCCCGCACCGCAACCGCGGCGCGGAGGAGGAGAGCT 60
consensus_12441#1 -----------GCTCGTCCGCTTGCCCCGCACCGCAACCGCGGCGCGGAGGAGGAGAGCT 49
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 CTCGCGCCGCGCGTGCGCGCGCGCGTGCGGGCGTGCGCGGGCGATCGAATCCGATCGCCA 120
consensus_12441#1 CTCGCGCCGCGCGTGCGCGCGCGCGTGCGGGCGTGCGCGGGCGATCGAATCCGATCGCCA 109
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 TGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTGCT 180
consensus_12441#1 TGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTACT 169
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 ACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACG 240
consensus_12441#1 ACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACG 229
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 GCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCT 300
consensus_12441#1 GCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCA 289
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 CCGCGGCGCACGCCAACGGCGGCGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGG 360
consensus_12441#1 CC--------------------CGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGG 329
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 AGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTAC 420
consensus_12441#1 AGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTAC 389
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 TTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCA 480
consensus_12441#1 TTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCA 449
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 TTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTC 540
consensus_12441#1 TTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTC 509
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 TTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTAT 600
consensus_12441#1 TTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTAT 569
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 CACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAA 660
consensus_12441#1 CACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAA 629
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 AAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCA 720
consensus_12441#1 AAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCA 689
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 GTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATC 780
consensus_12441#1 GTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATC 749
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 ATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAG 840
consensus_12441#1 ATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAG 809
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 CTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATG 900
consensus_12441#1 CTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATG 869
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 GGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAAC 960
consensus_12441#1 GGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAAC 929
consensus_12441#2 ------------------------------------------------------------
consensus_12441#0 TGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAG 1020
consensus_12441#1 TGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAG 989
consensus_12441#2 AGGACGAGACAAGGG---------GGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAG 51
*** * *** * ***********************************
consensus_12441#0 AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCC 1080
consensus_12441#1 AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCC 1049
consensus_12441#2 AAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCC 111
************************************************************
consensus_12441#0 CATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGT 1140
consensus_12441#1 CATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGT 1109
consensus_12441#2 CGTATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGT 171
* **********************************************************
consensus_12441#0 GCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAG 1200
consensus_12441#1 GCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAG 1169
consensus_12441#2 GCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAG 231
************************************************************
consensus_12441#0 AAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGC 1260
consensus_12441#1 AAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGC 1229
consensus_12441#2 AAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGC 291
************************************************************
consensus_12441#0 TTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCA 1320
consensus_12441#1 TTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCA 1289
consensus_12441#2 TTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCA 351
************************************************************
consensus_12441#0 ATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTT 1380
consensus_12441#1 ATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTT 1349
consensus_12441#2 ATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAAGGTTATTT 411
************************************************************
consensus_12441#0 GCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGA 1440
consensus_12441#1 GCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGA 1409
consensus_12441#2 GCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGTATTGTGGA 471
************************************************************
consensus_12441#0 AATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAG 1500
consensus_12441#1 AATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAG 1469
consensus_12441#2 AATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATGGTTGATAG 531
************************************************************
consensus_12441#0 AATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTG 1560
consensus_12441#1 AATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTG 1529
consensus_12441#2 AATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACACAATATTTG 591
************************************************************
consensus_12441#0 TTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTT 1620
consensus_12441#1 TTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTT 1589
consensus_12441#2 TTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGGTAATCCTT 651
************************************************************
consensus_12441#0 GCCCTTTCGGAATATGAGAGAAACATT----GTACATTTGTACTGGGTNCCNCCAAAAAA 1676
consensus_12441#1 GCCCTTTCGGAATAAAAGAAAAAAAA-----AAAAACTCGAG------------------ 1626
consensus_12441#2 GCCCTTTCGGAATATGAGAGAAACATTGTCCAAAAAAAAAAAAA---------------- 695
************** *** *** * * *
consensus_12441#0 AAAA 1680
consensus_12441#1 ----
consensus_12441#2 ----
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||