These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12446#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2680 fasta sequence [CCGCACTCTCACCCGCTTCCTCTCCAAGCCCCCTTTCAAGCCCAAGCCCACCAACCCCTCGCCGCCGCCGCCCCCGCCGCCGCCGGGGATCCAGCCTCCTCCACCGGCGCTGCCCGGCATGCCGCACGGACGCCCGCCGCCGCCGTTCCCGGGAGGGCGGGACGCGTTCCCGCAGGCGGCGTCGACGGTGGTCCCGGACCCGGCCAGGTTCTTCGCGCCGGCGCTGCTCTCGTCGCCGCTCCCCACCAACTCCTTCTTCCAGAACTTCGTGCTCAAGAACGGCGACCAGCCGGAGTACATCCACCCGTACTCGGTCCGCTCCGCCGCCGCCGCGCTCACCCTGTGCTACCCGGCGCGGAACCACTCCCCGTCGTTCGTCATCCAGACGTTCGTCGAGGACCTGACCGTCTCCGCGGCGTCCGACGCCGCGGCGGCCGCGGCGGGGCAGAGGCACCGGGTCGCCGCGTTCGACGACCTCTCAGTCACCCTCGACGTCTCGCCGTCGCTCAGGGCGTTCCTCGTCAGGGGCTGCCCCTTTGTCACCGTCGCCACCGCCGACGCCGCGGGCCCCGTCGACATCTCCGTCGCGTCCGTCCACGCCTTCATCGAGGTGGCCTCCTGCGACGACGCGCTCACCAAGTGGCGGCTCCGGATGAACAGCGGCCAGACCTTCCTCCTCTACGCGTCCGCGCCGATCCGCCTCGCGCAGTCCAGCGTCACGCAGCTGTCGGCCCCCGGCTTCTCCGGCGTCATCCGGGTCGCCTACCTGCCGGACCCGTCCATGGAGGCGGTTCTTGATCAGTACAGCCGGTGCTTCCCCACCGCCGGCGAGGCCTCGCTGAACCGCCCCTTCTGCGTCGAGTACACCTGGCGCAAGCAAGGGTGGGGAGACCTCCTCATGCTCGCCCATCCCCTCCACCTCCGCCTCCTCTCCGAGGATTGCTGCGTCCGGGTGCTCGACGATTTCAGGTACCGGAGTATCGACGGCGACATGGTCGGCGTCGTCGGCGATTCTTGGGTTCTCCGGACCGATCCGGTGTCCCCCACATGGCACTCGATGCGGGGCATCAGCGACGACGGGGTGGGCGAGGTCGCCGCCGCGCTGCGCAAGGATGTGGATGCCCTTGCTTCCAGCTCCATCACGACCACCTCCTCCTACTTCTACGGCAAGGCGATCGCCAGGGCGGCGAGGTTCGCCGTAATCGCCGAGGAGGTCGGCTGCCCTGACGTCATCCCGGCGGTGCAGCGATTCTTGAAGGCCACCGTCACGCCATGGCTGGATGGCAGCTTCCAGGGCAATGGATTCCTCTATGAACCCAAATGGGGTGGCCTTGTCACATTGCAGGGATCCAAGGACACCGGCGCCGATTTCGGCTTCGGCATTTACAATGATCACCACTACCATTTGGGGTACTTCTTGTACGCCATTGCTGTGCTTGCCAAGATTGATCCCTCCTGGGGGAGGAAGTACATGCCCCAGGCCTACTCCATGGTTGCAGATTTCATGACATTGTCGCGGAAACACGGCGCAAGCTACACAAGATTGAGGATGTTTGATCTCTGGAAGCTCCATTCCTGGGCCGGAGGTTTGACAGAATTTGCGGATGGGCGCAACCAGGAGAGCACTAGCGAGGCCGTGAATGCGTACTACTCCGCTGCGCTTCTCGGATTGAGCTATGGGGATACTCACCTTGTCTCCATCGGCGCGACATTGACCGCATTGGAGATGCTTGCAGCACAGACATGGTGGCATGTCCGTGAAGGTGACACCATCTACGAAGACGATTTCACCGGCAACAACCGTGTCGTCGGCGTCCTGTGGGCGAACAAGAGGGACAGTGGCCTCTGGTTCGCTCCACCGGAGTGGAAGGAATGCAGGCTGGGGATCCAGCTGCTGCCTGTCCTGCCGATCAGCGAGGCGCTGTTCCCGGACATCAGCTTCGTCAAGGAGCTGGTGGACTGGACAATGCCGGCATTGTCAAGGGAAGGGGTCGGAGAAGGGTGGAAGGGCTTCGTGTACGCCCTGGAGGGGATCTACAATAAGGAATCGGCATTGCAGAAGACGAGGGCGCTGACGGGGCACGACGATGGCAACTCCCTGACCAACCTTCTCTGGTGGCTGCACAGCCGCGGCACCGCCGATGATGGCGTCGTCGGGTTCTCCAGGTGCTGCTGGTACCGCCAGTATTGCCA-TTGATGGGGGCTGAAATGATCGCAGCAGAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAAGGATACAGATTATTATAGAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACATCAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTCATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCAGAAGTTTTGAGTTGCCTATGTTTTC-TTTTTTTTTTCTCTCTCTTTGTCTCGGTTTTGAGAGTGAGATTTCTCCTGCTGATAGCCTGCTAGCAGGTGTGGCCCATTCTCAATCTCAGGGCTCAGGCCAGTTTATTTGGAATGCAACTTACACAAAGCTTCCCCCTTAAACCACTAGAATATACTTCCTCCGTTTTATAATGTATAATGTATGATGTTGTTGACTTTTTAATCAACATTTAAT] [+] EMBL AK100032 [CCGCACTCTCACCCGCTTCCTCTCCAAGCCCCCTTTCAAGCCCAAGCCCACCAACCCCTCGCCGCCGCCGCCCCCGCCGCCGCCGGGGATCCAGCCTCCTCCACCGGCGCTGCCCGGCATGCCGCACGGACGCCCGCCGCCGCCGTTCCCGGGAGGGCGGGACGCGTTCCCGCAGGCGGCGTCGACGGTGGTCCCGGACCCGGCCAGGTTCTTCGCGCCGGCGCTGCTCTCGTCGCCGCTCCCCACCAACTCCTTCTTCCAGAACTTCGTGCTCAAGAACGGCGACCAGCCGGAGTACATCCACCCGTACTCGGTCCGCTCCGCCGCCGCCGCGCTCACCCTGTGCTACCCGGCGCGGAACCACTCCCCGTCGTTCGTCATCCAGACGTTCGTCGAGGACCTGACCGTCTCCGCGGCGTCCGACGCCGCGGCGGCCGCGGCGGGGCAGAGGCACCGGGTCGCCGCGTTCGACGACCTCTCAGTCACCCTCGACGTCTCGCCGTCGCTCAGGGCGTTCCTCGTCAGGGGCTGCCCCTTTGTCACCGTCGCCACCGCCGACGCCGCGGGCCCCGTCGACATCTCCGTCGCGTCCGTCCACGCCTTCATCGAGGTGGCCTCCTGCGACGACGCGCTCACCAAGTGGCGGCTCCGGATGAACAGCGGCCAGACCTTCCTCCTCTACGCGTCCGCGCCGATCCGCCTCGCGCAGTCCAGCGTCACGCAGCTGTCGGCCCCCGGCTTCTCCGGCGTCATCCGGGTCGCCTACCTGCCGGACCCGTCCATGGAGGCGGTTCTTGATCAGTACAGCCGGTGCTTCCCCACCGCCGGCGAGGCCTCGCTGAACCGCCCCTTCTGCGTCGAGTACACCTGGCGCAAGCAAGGGTGGGGAGACCTCCTCATGCTCGCCCATCCCCTCCACCTCCGCCTCCTCTCCGAGGATTGCTGCGTCCGGGTGCTCGACGATTTCAGGTACCGGAGTATCGACGGCGACATGGTCGGCGTCGTCGGCGATTCTTGGGTTCTCCGGACCGATCCGGTGTCCCCCACATGGCACTCGATGCGGGGCATCAGCGACGACGGGGTGGGCGAGGTCGCCGCCGCGCTGCGCAAGGATGTGGATGCCCTTGCTTCCAGCTCCATCACGACCACCTCCTCCTACTTCTACGGCAAGGCGATCGCCAGGGCGGCGAGGTTCGCCGTAATCGCCGAGGAGGTCGGCTGCCCTGACGTCATCCCGGCGGTGCAGCGATTCTTGAAGGCCACCGTCACGCCATGGCTGGATGGCAGCTTCCAGGGCAATGGATTCCTCTATGAACCCAAATGGGGTGGCCTTGTCACATTGCAGGGATCCAAGGACACCGGCGCCGATTTCGGCTTCGGCATTTACAATGATCACCACTACCATTTGGGGTACTTCTTGTACGCCATTGCTGTGCTTGCCAAGATTGATCCCTCCTGGGGGAGGAAGTACATGCCCCAGGCCTACTCCATGGTTGCAGATTTCATGACATTGTCGCGGAAACACGGCGCAAGCTACACAAGATTGAGGATGTTTGATCTCTGGAAGCTCCATTCCTGGGCCGGAGGTTTGACAGAATTTGCGGATGGGCGCAACCAGGAGAGCACTAGCGAGGCCGTGAATGCGTACTACTCCGCTGCGCTTCTCGGATTGAGCTATGGGGATACTCACCTTGTCTCCATCGGCGCGACATTGACCGCATTGGAGATGCTTGCAGCACAGACATGGTGGCATGTCCGTGAAGGTGACACCATCTACGAAGACGATTTCACCGGCAACAACCGTGTCGTCGGCGTCCTGTGGGCGAACAAGAGGGACAGTGGCCTCTGGTTCGCTCCACCGGAGTGGAAGGAATGCAGGCTGGGGATCCAGCTGCTGCCTGTCCTGCCGATCAGCGAGGCGCTGTTCCCGGACATCAGCTTCGTCAAGGAGCTGGTGGACTGGACAATGCCGGCATTGTCAAGGGAAGGGGTCGGAGAAGGGTGGAAGGGCTTCGTGTACGCCCTGGAGGGGATCTACAATAAGGAATCGGCATTGCAGAAGACGAGGGCGCTGACGGGGCACGACGATGGCAACTCCCTGACCAACCTTCTCTGGTGGCTGCACAGCCGCGGCACCGCCGATGATGGCGTCGTCGGGTTCTCCAGGTGCTGCTGGTACCGCCAGTATTGCCA TTGATGGGGGCTGAAATGATCGCAGCAGAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAAGGATACAGATTATTATAGAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACATCAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTCATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCAGAAGTTTTGAGTTGCCTATGTTTTC TTTTTTTTTTCTCTCTCTTTGTCTCGGTTTTGAGAGTGAGATTTCTCCTGCTGATAGCCTGCTAGCAGGTGTGGCCCATTCTCAATCTCAGGGCTCAGGCCAGTTTATTTGGAATGCAACTTACACAAAGCTTCCCCCTTAAACCACTAGAATATACTTCCTCCGTTTTATAATGTATAATGTATGATGTTGTTGACTTTTTAATCAACATTTAAT] [+] EMBL AK100548 [CCGCACTCTCACCCGCTTCCTCTCCAAGCCCCCTTTCAAGCCCAAGCCCACCAACCCCTCGCCGCCGCCGCCCCCGCCGCCGCCGGGGATCCAGCCTCCTCCACCGGCGCTGCCCGGCATGCCGCACGGACGCCCGCCGCCGCCGTTCCCGGGAGGGCGGGACGCGTTCCCGCAGGCGGCGTCGACGGTGGTCCCGGACCCGGCCAGGTTCTTCGCGCCGGCGCTGCTCTCGTCGCCGCTCCCCACCAACTCCTTCTTCCAGAACTTCGTGCTCAAGAACGGCGACCAGCCGGAGTACATCCACCCGTACTCGGTCCGCTCCGCCGCCGCCGCGCTCACCCTGTGCTACCCGGCGCGGAACCACTCCCCGTCGTTCGTCATCCAGACGTTCGTCGAGGACCTGACCGTCTCCGCGGCGTCCGACGCCGCGGCGGCCGCGGCGGGGCAGAGGCACCGGGTCGCCGCGTTCGACGACCTCTCAGTCACCCTCGACGTCTCGCCGTCGCTCAGGGCGTTCCTCGTCAGGGGCTGCCCCTTTGTCACCGTCGCCACCGCCGACGCCGCGGGCCCCGTCGACATCTCCGTCGCGTCCGTCCACGCCTTCATCGAGGTGGCCTCCTGCGACGACGCGCTCACCAAGTGGCGGCTCCGGATGAACAGCGGCCAGACCTTCCTCCTCTACGCGTCCGCGCCGATCCGCCTCGCGCAGTCCAGCGTCACGCAGCTGTCGGCCCCCGGCTTCTCCGGCGTCATCCGGGTCGCCTACCTGCCGGACCCGTCCATGGAGGCGGTTCTTGATCAGTACAGCCGGTGCTTCCCCACCGCCGGCGAGGCCTCGCTGAACCGCCCCTTCTGCGTCGAGTACACCTGGCGCAAGCAAGGGTGGGGAGACCTCCTCATGCTCGCCCATCCCCTCCACCTCCGCCTCCTCTCCGAGGATTGCTGCGTCCGGGTGCTCGACGATTTCAGGTACCGGAGTATCGACGGCGACATGGTCGGCGTCGTCGGCGATTCTTGGGTTCTCCGGACCGATCCGGTGTCCCCCACATGGCACTCGATGCGGGGCATCAGCGACGACGGGGTGGGCGAGGTCGCCGCCGCGCTGCGCAAGGATGTGGATGCCCTTGCTTCCAGCTCCATCACGACCACCTCCTCCTACTTCTACGGCAAGGCGATCGCCAGGGCGGCGAGGTTCGCCGTAATCGCCGAGGAGGTCGGCTGCCCTGACGTCATCCCGGCGGTGCAGCGATTCTTGAAGGCCACCGTCACGCCATGGCTGGATGGCAGCTTCCAGGGCAATGGATTCCTCTATGAACCCAAATGGGGTGGCCTTGTCACATTGCAGGGATCCAAGGACACCGGCGCCGATTTCGGCTTCGGCATTTACAATGATCACCACTACCATTTGGGGTACTTCTTGTACGCCATTGCTGTGCTTGCCAAGATTGATCCCTCCTGGGGGAGGAAGTACATGCCCCAGGCCTACTCCATGGTTGCAGATTTCATGACATTGTCGCGGAAACACGGCGCAAGCTACACAAGATTGAGGATGTTTGATCTCTGGAAGCTCCATTCCTGGGCCGGAGGTTTGACAGAATTTGCGGATGGGCGCAACCAGGAGAGCACTAGCGAGGCCGTGAATGCGTACTACTCCGCTGCGCTTCTCGGATTGAGCTATGGGGATACTCACCTTGTCTCCATCGGCGCGACATTGACCGCATTGGAGATGCTTGCAGCACAGACATGGTGGCATGTCCGTGAAGGTGACACCATCTACGAAGACGATTTCACCGGCAACAACCGTGTCGTCGGCGTCCTGTGGGCGAACAAGAGGGACAGTGGCCTCTGGTTCGCTCCACCGGAGTGGAAGGAATGCAGGCTGGGGATCCAGCTGCTGCCTGTCCTGCCGATCAGCGAGGCGCTGTTCCCGGACATCAGCTTCGTCAAGGAGCTGGTGGACTGGACAATGCCGGCATTGTCAAGGGAAGGGGTCGGAGAAGGGTGGAAGGGCTTCGTGTACGCCCTGGAGGGGATCTACAATAAGGAATCGGCATTGCAGAAGACGAGGGCGCTGACGGGGCACGACGATGGCAACTCCCTGACCAACCTTCTCTGGTGGCTGCACAGCCGCGGCACCGCCGATGATGGCGTCGTCGGGTTCTCCAGGTGCTGCTGGTACCGCCAGTATTGCCA TTGATGGGGGCTGAAATGATCGCAGCAGAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAAGGATACAGATTATTATAGAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACATCAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTCATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCAGAAGTTT ] [+] EMBL AK105910 [ CGCACTCTCACCCGCTTCCTCTCCAAGCCCCCTTTCAAGCCCAAGCCCACCAACCCCTCGCCGCCGCCGCCCCCGCCGCCGCCGGGGATCCAGCCTCCTCCACCGGCGCTGCCCGGCATGCCGCACGGACGCCCGCCGCCGCCGTTCCCGGGAGGGCGGGACGCGTTCCCGCAGGCGGCGTCGACGGTGGTCCCGGACCCGGCCAGGTTCTTCGCGCCGGCGCTGCTCTCGTCGCCGCTCCCCACCAACTCCTTCTTCCAGAACTTCGTGCTCAAGAACGGCGACCAGCCGGAGTACATCCACCCGTACTCGGTCCGCTCCGCCGCCGCCGCGCTCACCCTGTGCTACCCGGCGCGGAACCACTCCCCGTCGTTCGTCATCCAGACGTTCGTCGAGGACCTGACCGTCTCCGCGGCGTCCGACGCCGCGGCGGCCGCGGCGGGGCAGAGGCACCGGGTCGCCGCGTTCGACGACCTCTCAGTCACCCTCGACGTCTCGCCGTCGCTCAGGGCGTTCCTCGTCAGGGGCTGCCCCTTTGTCACCGTCGCCACCGCCGACGCCGCGGGCCCCGTCGACATCTCCGTCGCGTCCGTCCACGCCTTCATCGAGGTGGCCTCCTGCGACGACGCGCTCACCAAGTGGCGGCTCCGGATGAACAGCGGCCAGACCTTCCTCCTCTACGCGTCCGCGCCGATCCGCCTCGCGCAGTCCAGCGTCACGCAGCTGTCGGCCCCCGGCTTCTCCGGCGTCATCCGGGTCGCCTACCTGCCGGACCCGTCCATGGAGGCGGTTCTTGATCAGTACAGCCGGTGCTTCCCCACCGCCGGCGAGGCCTCGCTGAACCGCCCCTTCTGCGTCGAGTACACCTGGCGCAAGCAAGGGTGGGGAGACCTCCTCATGCTCGCCCATCCCCTCCACCTCCGCCTCCTCTCCGAGGATTGCTGCGTCCGGGTGCTCGACGATTTCAGGTACCGGAGTATCGACGGCGACATGGTCGGCGTCGTCGGCGATTCTTGGGTTCTCCGGACCGATCCGGTGTCCCCCACATGGCACTCGATGCGGGGCATCAGCGACGACGGGGTGGGCGAGGTCGCCGCCGCGCTGCGCAAGGATGTGGATGCCCTTGCTTCCAGCTCCATCACGACCACCTCCTCCTACTTCTACGGCAAGGCGATCGCCAGGGCGGCGAGGTTCGCCGTAATCGCCGAGGAGGTCGGCTGCCCTGACGTCATCCCGGCGGTGCAGCGATTCTTGAAGGCCACCGTCACGCCATGGCTGGATGGCAGCTTCCAGGGCAATGGATTCCTCTATGAACCCAAATGGGGTGGCCTTGTCACATTGCAGGGATCCAAGGACACCGGCGCCGATTTCGGCTTCGGCATTTACAATGATCACCACTACCATTTGGGGTACTTCTTGTACGCCATTGCTGTGCTTGCCAAGATTGATCCCTCCTGGGGGAGGAAGTACATGCCCCAGGCCTACTCCATGGT ] [+] EMBL CB640632 [ GCACGGACGCCCGCCGCCGCCGTTCCCGGGAGGGCGGGACGCGTTCCCGCAGGCGGCGTCGACGGTGGTCCCGGACCCGGCCAGGTTCTTCGCGCCGGCGCTGCTCTCGTCGCCGCTCCCCACCAACTCCTTCTTCCAGAACTTCGTGCTCAAGAACGGCGACCAGCCGGA TTCTTTTCCCCGTACTCGGTCCGCTCCGCCGCCGCCGCGCTCACCCTGTGCTACCCGGCGCCGCACCACTTCCCGTCGTTCGTCATCCAGACGTTCGTCGAGGACC ] [+] EMBL BI808343 [ ATCCAGCTGCTGCCTGTCCTGCCGATCAGCGA GCGCTGTTCCCGGACATCAGCTTCGTCAAGGAGCTGGTGGACTGGAC ATGCCGGCATTGTCAAGGG AGGGGTCGGAGAAGGGTGGAAGGGCTTCGTGTACGCCCTGGAGGGGATCTACCATAAGGAATCGGCATTGCAGAAGACGAGGGCCCTGACGGGGCACGACGACGGCAACTCCCTGACCAACCTTCTCTGGTGGCTGCACAGCCGCGGCACCGCCGATGATGGCGTCGTCGGGTTCTCCAGGTGCTGCTGGTACCGCCAGTATTGCCACTTGATGGGGGCTGAAATGATCGCAGCAGAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAAGGATACAGATTATTATAGAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACATCAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCCAAAaaaaaaa ] [+] EMBL CA767529 [ TGGCAATTCCCTGACC ACCTTCTCTGGTGGCTGCACAGCCGCGGCACCGCCGATGATGGCGTCGTCGGGTTCTCCAGGTGCTGCTGGTACCGCCAGTATTGCCA TTGATGGGGGCTGAAATGATCGCAGCAGAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAAGGATACAGATTATTATAGAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACATCAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTCATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCAGAAGTTTTGAGTTGCCTATGTTTTCTTTTTTTTTTTCTCTCTCTTTGTCTCGGTTTTGAGAGTGAGATTTCTCCTGCTGATAGCCTGCTAGCAGGTGTGGCCCATTCTCAATCTCAGGGCTCAGGCCAGTTTATTTGGAATGCAACTTACACAAAGATTCCCCCTTAAACCACTAGAATATACTTCCTCCGTTTTATAATGTACAATGTATGATGTTGTTGACTTTTTAATCAACATTTGAT] [+] EMBL AU163895 [ GTGCTGCTGGTACCGCCAGTATTGCCA TTGATGGGGGCTGAAATGATCGCAGCAGAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAAGGATACAGATTATTATAGAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACATCAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTCATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCAGAAaaa ] [+] EMBL BM038087 [ CCGTGTGATTCAAACATCAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTCATGGTATGTTGATATTTTACATGGAAC C ATTGGTTCAGAAaaaaaaa ] consensusID : consensus_12446#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 414 fasta sequence [ACGGGGCACGACGATGGCAACTCCCTGACCAACCTTCTCTGGTGGCTGCACAGCCGCGGCACCGCCGATGATGGCGTCGTCGGGTTCTCCAGGTGCTGCTGGTACCGCCAGTATTGCCATTGATGGGGGCTGAAATGATCGCAGCAGAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAAGGATACAGATTATTATAAAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACATCAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTCATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCANAAGTTTTGAGTTGCCTATGTTTTCTTTAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU165963 [ACGGGGCACGACGATGGCAACTCCCTGACCAACCTTCTCTGGTGGCTGCACAGCCGCGGCACCGCCGATGATGGCGTCGTCGGGTTCTCCAGGTGCTGCTGGTACCGCCAGTATTGCCATTGATGGGGGCTGAAATGATCGCAGCAGAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAAGGATACAGATTATTATAAAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACATCAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTCATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCANAAGTTTTGAGTTGCCTATGTTTTCTTTAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU101923 [ TGAAGATCAGGTTGTGTGGGTGATATGCCGAAGGATACAGATTATTATAGAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACATCAGGATGCTACNCACACANCTTTTNCACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTCATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCAGAAGTTTTGAGTTGCCTATGTTTTCTTTAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12446#0 CCGCACTCTCACCCGCTTCCTCTCCAAGCCCCCTTTCAAGCCCAAGCCCACCAACCCCTC 60 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GCCGCCGCCGCCCCCGCCGCCGCCGGGGATCCAGCCTCCTCCACCGGCGCTGCCCGGCAT 120 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GCCGCACGGACGCCCGCCGCCGCCGTTCCCGGGAGGGCGGGACGCGTTCCCGCAGGCGGC 180 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GTCGACGGTGGTCCCGGACCCGGCCAGGTTCTTCGCGCCGGCGCTGCTCTCGTCGCCGCT 240 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CCCCACCAACTCCTTCTTCCAGAACTTCGTGCTCAAGAACGGCGACCAGCCGGAGTACAT 300 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CCACCCGTACTCGGTCCGCTCCGCCGCCGCCGCGCTCACCCTGTGCTACCCGGCGCGGAA 360 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CCACTCCCCGTCGTTCGTCATCCAGACGTTCGTCGAGGACCTGACCGTCTCCGCGGCGTC 420 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CGACGCCGCGGCGGCCGCGGCGGGGCAGAGGCACCGGGTCGCCGCGTTCGACGACCTCTC 480 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 AGTCACCCTCGACGTCTCGCCGTCGCTCAGGGCGTTCCTCGTCAGGGGCTGCCCCTTTGT 540 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CACCGTCGCCACCGCCGACGCCGCGGGCCCCGTCGACATCTCCGTCGCGTCCGTCCACGC 600 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CTTCATCGAGGTGGCCTCCTGCGACGACGCGCTCACCAAGTGGCGGCTCCGGATGAACAG 660 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CGGCCAGACCTTCCTCCTCTACGCGTCCGCGCCGATCCGCCTCGCGCAGTCCAGCGTCAC 720 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GCAGCTGTCGGCCCCCGGCTTCTCCGGCGTCATCCGGGTCGCCTACCTGCCGGACCCGTC 780 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CATGGAGGCGGTTCTTGATCAGTACAGCCGGTGCTTCCCCACCGCCGGCGAGGCCTCGCT 840 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GAACCGCCCCTTCTGCGTCGAGTACACCTGGCGCAAGCAAGGGTGGGGAGACCTCCTCAT 900 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GCTCGCCCATCCCCTCCACCTCCGCCTCCTCTCCGAGGATTGCTGCGTCCGGGTGCTCGA 960 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CGATTTCAGGTACCGGAGTATCGACGGCGACATGGTCGGCGTCGTCGGCGATTCTTGGGT 1020 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 TCTCCGGACCGATCCGGTGTCCCCCACATGGCACTCGATGCGGGGCATCAGCGACGACGG 1080 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GGTGGGCGAGGTCGCCGCCGCGCTGCGCAAGGATGTGGATGCCCTTGCTTCCAGCTCCAT 1140 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CACGACCACCTCCTCCTACTTCTACGGCAAGGCGATCGCCAGGGCGGCGAGGTTCGCCGT 1200 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 AATCGCCGAGGAGGTCGGCTGCCCTGACGTCATCCCGGCGGTGCAGCGATTCTTGAAGGC 1260 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CACCGTCACGCCATGGCTGGATGGCAGCTTCCAGGGCAATGGATTCCTCTATGAACCCAA 1320 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 ATGGGGTGGCCTTGTCACATTGCAGGGATCCAAGGACACCGGCGCCGATTTCGGCTTCGG 1380 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CATTTACAATGATCACCACTACCATTTGGGGTACTTCTTGTACGCCATTGCTGTGCTTGC 1440 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CAAGATTGATCCCTCCTGGGGGAGGAAGTACATGCCCCAGGCCTACTCCATGGTTGCAGA 1500 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 TTTCATGACATTGTCGCGGAAACACGGCGCAAGCTACACAAGATTGAGGATGTTTGATCT 1560 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CTGGAAGCTCCATTCCTGGGCCGGAGGTTTGACAGAATTTGCGGATGGGCGCAACCAGGA 1620 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GAGCACTAGCGAGGCCGTGAATGCGTACTACTCCGCTGCGCTTCTCGGATTGAGCTATGG 1680 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GGATACTCACCTTGTCTCCATCGGCGCGACATTGACCGCATTGGAGATGCTTGCAGCACA 1740 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GACATGGTGGCATGTCCGTGAAGGTGACACCATCTACGAAGACGATTTCACCGGCAACAA 1800 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CCGTGTCGTCGGCGTCCTGTGGGCGAACAAGAGGGACAGTGGCCTCTGGTTCGCTCCACC 1860 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GGAGTGGAAGGAATGCAGGCTGGGGATCCAGCTGCTGCCTGTCCTGCCGATCAGCGAGGC 1920 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 GCTGTTCCCGGACATCAGCTTCGTCAAGGAGCTGGTGGACTGGACAATGCCGGCATTGTC 1980 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 AAGGGAAGGGGTCGGAGAAGGGTGGAAGGGCTTCGTGTACGCCCTGGAGGGGATCTACAA 2040 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 TAAGGAATCGGCATTGCAGAAGACGAGGGCGCTGACGGGGCACGACGATGGCAACTCCCT 2100 consensus_12446#1 ----------------------------------ACGGGGCACGACGATGGCAACTCCCT 26 ************************** consensus_12446#0 GACCAACCTTCTCTGGTGGCTGCACAGCCGCGGCACCGCCGATGATGGCGTCGTCGGGTT 2160 consensus_12446#1 GACCAACCTTCTCTGGTGGCTGCACAGCCGCGGCACCGCCGATGATGGCGTCGTCGGGTT 86 ************************************************************ consensus_12446#0 CTCCAGGTGCTGCTGGTACCGCCAGTATTGCCATTGATGGGGGCTGAAATGATCGCAGCA 2220 consensus_12446#1 CTCCAGGTGCTGCTGGTACCGCCAGTATTGCCATTGATGGGGGCTGAAATGATCGCAGCA 146 ************************************************************ consensus_12446#0 GAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAA 2280 consensus_12446#1 GAGATTGCCCGAGATGATGCGTTGTTGCTGAAGATCAGGTTGTGTGGGTGATATGCCGAA 206 ************************************************************ consensus_12446#0 GGATACAGATTATTATAGAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACAT 2340 consensus_12446#1 GGATACAGATTATTATAAAGTGGGCTGTTCAGTTTCAGAGTTTCCGTGTGATTCAAACAT 266 ***************** ****************************************** consensus_12446#0 CAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTC 2400 consensus_12446#1 CAGGATGCTACACACACATCTTTTACACTTTGTTGTTTCAATAAAAAGTAGTCAAAAGTC 326 ************************************************************ consensus_12446#0 ATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCAGAAGTTTTGAGTTGCCTATGT 2460 consensus_12446#1 ATGGTATGTTGATATTTTACATGGAACGCAATTGGTTCANAAGTTTTGAGTTGCCTATGT 386 *************************************** ******************** consensus_12446#0 TTTCTTTTTTTTTTCTCTCTCTTTGTCTCGGTTTTGAGAGTGAGATTTCTCCTGCTGATA 2520 consensus_12446#1 TTTCTTTAAAAAAAAAAAAAAAAAAAAA-------------------------------- 414 ******* consensus_12446#0 GCCTGCTAGCAGGTGTGGCCCATTCTCAATCTCAGGGCTCAGGCCAGTTTATTTGGAATG 2580 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 CAACTTACACAAAGCTTCCCCCTTAAACCACTAGAATATACTTCCTCCGTTTTATAATGT 2640 consensus_12446#1 ------------------------------------------------------------ consensus_12446#0 ATAATGTATGATGTTGTTGACTTTTTAATCAACATTTAAT 2680 consensus_12446#1 ---------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||