cluster # 1246

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Oryza sativa
cluster # 1246 cluster # 1246 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1246#0 length = 919 sequences # 2

consensusID : consensus_1246#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 919
fasta sequence

                              [TCTAATTAGTGACGGCGCCATGAATGGATTTAACGGAGATTCCCACCTGTCCCCTGTCTACTATTCCAGNGNAACCACAGCCCAAGGGAACGGGCTTGGCGGGAATCAACGGGGNAAAAGAAGACCCTGTTNAAGCTTGACTCTAGTCCGACTTTGGTGAAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTCGGGGCGCAAAGTGAAAATACCACTACTTTTAACGTTATTTTACTTATTCCCGTGAGTCGGAAGCGGGGGCCTGGCCCCTCCTTTTGGCTCTAAGGCCCGAGTCCCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTTTCTTGTTTTTTTCTTGTTTTTTGCATCAGCCAGAGATGGAGACCTCGGCGGCGGCGGCGCCCAATGGCGGCGCGGCGGCGGCGGAGCAGCAGCAGCGGCGTCGGCTGCCGGACTTCCAGCAGTCCGTGAGGCTCAAGTACGTGAAGCTGGGGTACCACTACCTGATCTGCCACGGCATGTACCTGGTGCTGTACGCGCTGATGGCCCTGGTGGCTGGCATGTTTGAACCTTGTTCCGGGGCAAATTGTTCGAACTGAGTGAGGGGTCCGGGTTTAGTAAAGTACGTGTAGGGTTGTTTGAGGGGCCCTTTTCGGTAGTGAGGCTTGTGAGTGAGAGTGGTGCGTGGGGTTCGCATCGAAGATTTTTGGTAAGGCGTGCTCATGTTTAGTATGGCGTAGGATGAAGAGGAGGAAGGTGCGTGTGGGAAATGGATAGAAGTGGGGTGTGGGTGATATAGAGAGTAGGGCAGTGAAAGTGGTGAGATAATGAGGATGGGAAG]

[-] EMBL AU184123             [TCTAATTAGTGACGGCGCCATGAATGGATTTAACGGAGATTCCCACCTGTCCCCTGTCTACTATTCCAGNGNAACCACAGCCCAAGGGAACGGGCTTGGCGGGAATCAACGGGGNAAAAGAAGACCCTGTTNAAGCTTGACTCTAGTCCGACTTTGGTGAAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTCGGGGCGCAAAGTGAAAATACCACTACTTTTAACGTTATTTTACTTATTCCCGTGAGTCGGAAGCGGGGGCCTGGCCCCTCCTTTTGGCTCTAAGGCCCGAGTCCCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AW155548             [                                                                                                                                                  TCCGACTTT GTG AAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTC GGGCGC AAGTG AAATACCACTACTTTTAACGTTATTTTACTTATT CCGTGAGTCGGAAGC GGGGCCTGGCCCCTCCTTTTGGCTCTAAGGCCCGAGTCCCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAACCTCTTGTTTCTTGTTTTTTTCTTGTTTTTTGCATCAGCCAGAGATGGAGACCTCGGCGGCGGCGGCGCCCAATGGCGGCGCGGCGGCGGCGGAGCAGCAGCAGCGGCGTCGGCTGCCGGACTTCCAGCAGTCCGTGAGGCTCAAGTACGTGAAGCTGGGGTACCACTACCTGATCTGCCACGGCATGTACCTGGTGCTGTACGCGCTGATGGCCCTGGTGGCTGGCATGTTTGAACCTTGTTCCGGGGCAAATTGTTCGAACTGAGTGAGGGGTCCGGGTTTAGTAAAGTACGTGTAGGGTTGTTTGAGGGGCCCTTTTCGGTAGTGAGGCTTGTGAGTGAGAGTGGTGCGTGGGGTTCGCATCGAAGATTTTTGGTAAGGCGTGCTCATGTTTAGTATGGCGTAGGATGAAGAGGAGGAAGGTGCGTGTGGGAAATGGATAGAAGTGGGGTGTGGGTGATATAGAGAGTAGGGCAGTGAAAGTGGTGAGATAATGAGGATGGGAAG]




>consensus_1246#0
TCTAATTAGTGACGGCGCCATGAATGGATTTAACGGAGATTCCCACCTGTCCCCTGTCTA
CTATTCCAGNGNAACCACAGCCCAAGGGAACGGGCTTGGCGGGAATCAACGGGGNAAAAG
AAGACCCTGTTNAAGCTTGACTCTAGTCCGACTTTGGTGAAAATGACTTGAGAGGTGTAG
GATAAGTGGGAGCCCTCGGGGCGCAAAGTGAAAATACCACTACTTTTAACGTTATTTTAC
TTATTCCCGTGAGTCGGAAGCGGGGGCCTGGCCCCTCCTTTTGGCTCTAAGGCCCGAGTC
CCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACAT
CTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTT
TCTTGTTTTTTTCTTGTTTTTTGCATCAGCCAGAGATGGAGACCTCGGCGGCGGCGGCGC
CCAATGGCGGCGCGGCGGCGGCGGAGCAGCAGCAGCGGCGTCGGCTGCCGGACTTCCAGC
AGTCCGTGAGGCTCAAGTACGTGAAGCTGGGGTACCACTACCTGATCTGCCACGGCATGT
ACCTGGTGCTGTACGCGCTGATGGCCCTGGTGGCTGGCATGTTTGAACCTTGTTCCGGGG
CAAATTGTTCGAACTGAGTGAGGGGTCCGGGTTTAGTAAAGTACGTGTAGGGTTGTTTGA
GGGGCCCTTTTCGGTAGTGAGGCTTGTGAGTGAGAGTGGTGCGTGGGGTTCGCATCGAAG
ATTTTTGGTAAGGCGTGCTCATGTTTAGTATGGCGTAGGATGAAGAGGAGGAAGGTGCGT
GTGGGAAATGGATAGAAGTGGGGTGTGGGTGATATAGAGAGTAGGGCAGTGAAAGTGGTG
AGATAATGAGGATGGGAAG

clustalw multiple alignements is not computed in this case