These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12467#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1576 fasta sequence [CACATCCTCTTTCTCATTCATTCTCTCCCTACTTTTGCCTGGCATTTGCTTTGCGTTCGTTAACCCTAGATTATCTTAGATCTGGAAGAAGCTCTCTTAATTTTATAGAGACTTAACCTTAATACAAATAACAGATTGTTTGTTCCCCCAAAGTTTGGGGGTTCAACTGAAACCCCATGCCCCCCCATGTCCCAAGTTGGATCCGCCGGTGAGGGATCCAATTCCATGGCGGCTGCTCCTCCTCCTCGCCTCCTCCTCCTCGTCGTCCTCCTCCTCGTGCCAGTCTCCAACGCCATCTACTGCGAGGAGGATGATTGCTATGATCTTCTAGGAGTCAAGCAGGACGCGAACGTATCGGAGATCAAGAAAGCCTACTACAAGCTCTCTCTCAAACACCATCCGGATAAGAATCCTGATCCGGAGTCACGGAAGCTGTTTGTCAAGATTGCCAATGCTTACGAGATTCTAAAAGACGAATCAACTAGGGGGCAATATGACTATGCTATTGCACATCCAGAGGAGGTTTTCTACAACACTGCTCAGTACTATAGGGCATACTATGGCCATAAAACGGATCCTCGTGCTGTGTTAATTGGCCTTCTTCTAATTATTTCAGCATTTCAATACTTAAACCAGTTCGGAAGGTATAGTAAGGCCATAGAAACTGTGAAGCAAACTCCTGCTTACAAAAATAGGTTAAAAGCATTGGAGTTTGAGCGAACAGGAGGAATTTCAAGCAAAAAGAAGGGTCACAAGCAGATGGATAAGAAAGTTGAAGAAGTGCTAAGTAACGAAGTTGAGTTGCAGATCCA-GGGGGTTGAAAAACCTTCCTTATGGAGACTCTATGGTGTTCAGTTTATAC-TTCTGCCATATTCCATAGGCAAGGTGCTCAGTTGGAAATTTTGTTGGTTTTGGAGATACCGGATAAAGAAATTACCATATGCAT-GGGAGGATGCATGCTACTTGACTCGGATGTCTCTTAAGATA-CCTGCTAATACAT-GGGAAAATATTGATGATTATA-GGAAGGAGAATCTTGTCATGAAACGCCTCTGGGAAAAGAACAATATGGAGAGGTATATTGCAGAGATGAGAAAGGAATCAAAGCGTAGAA-GATAGCTGTAGCATATTCAACAAGAACGTGGACCGAGAACCCCCTGGATGTCAGCAACCC-AACTCCTATTTGTCAAAGCTTGTGTCACAGTACGTTGCTTTATTGCCCTTTTAGGGATTAAAACAAAGAGATTAGGAGCTAGTTTAGCAATCGTCTTCCCTTGCAGCCATCTGTCACTCCAAAACTTGGTAATTTCTCCATTTCAAACTGTAGTTTTGAAAACATCAAAAAGGGAGTTTTGATGGATAAACCAGCCCAAGGCCTTGAAGAGTCTGTTTTTTTTAACCAAAGCCATCTCATGTGCAAAGCCCACCCCATCTTTTCAAGATTAAGAATACCAAGTTCTCCCAAAGATAGGGGCCGACACACTCGGTCCCAACAAACCAAGCAGTTCCCATGGGTTCCATGTACAATACAAATTAACTACGTAATTAATTGAGACAATACAAATTAATTAAAAAAAAA] [+] EMBL AK102565 [CACATCCTCTTTCTCATTCATTCTCTCCCTACTTTTGCCTGGCATTTGCTTTGCGTTCGTTAACCCTAGATTATCTTAGATCTGGAAGAAGCTCTCTTAATTTTATAGAGACTTAACCTTAATACAAATAACAGATTGTTTGTTCCCCCAAAGTTTGGGGGTTCAACTGAAACCCCATGCCCCCCCATGTCCCAAGTTGGATCCGCCGGTGAGGGATCCAATTCCATGGCGGCTGCTCCTCCTCCTCGCCTCCTCCTCCTCGTCGTCCTCCTCCTCGTGCCAGTCTCCAACGCCATCTACTGCGAGGAGGATGATTGCTATGATCTTCTAGGAGTCAAGCAGGACGCGAACGTATCGGAGATCAAGAAAGCCTACTACAAGCTCTCTCTCAAACACCATCCGGATAAGAATCCTGATCCGGAGTCACGGAAGCTGTTTGTCAAGATTGCCAATGCTTACGAGATTCTAAAAGACGAATCAACTAGGGGGCAATATGACTATGCTATTGCACATCCAGAGGAGG TTTCTACAACACTGCTCAGTACTATAGGGCATACTATGGCCATAAAACGGATCCTCGTGCTGTGTTAATTGGCCTTCTTCTAATTATTTCAGCATTTCAATACTTAAACCAGTTCGGAAGGTATAGTAAGGCCATAGAAACTGTGAAGCAAACTCCTGCTTACAAAAATAGGTTAAAAGCATTGGAGTTTGAGCGAACAGGAGGAATTTCAAGCAAAAAGAAGGGTCACAAGCAGATGGATAAGAAAGTTGAAGAAGTGCTAAGTAACGAAGTTGAGTTGCAGATCCA GGGGGTTGAAAAACCTTCCTTATGGAGACTCTATGGTGTTCAGTTTATAC TTCTGCCATATTCCATAGGCAAGGTGCTCAGTTGGGAATTTTGTTGGTTTTGGAGATACCGGATAAAGAAATTACCATATGCAT GGGAGGATGCATGCTACTTGACTCGGATGTCTCTTAAGATA CCTGCTAATACAT GGGAAAATATTGATGATTATA GGAAGGAGAATCTTGTCATGAAACGCCTCTGGGAAAAGAACAATATGGAGAGGTATATTGCAGAGATGAGAAAGGAATCAAAGCGTAGAA GATAGCTGTAGCATATTCAACAAGAACGTGGACCGAGAACCCCCTGGATGTCAGCAACCC AACTCCTATTTGTCAAAGCTTGTGTCACAGTACGTTGCTTTGTTGCCCTTTTAGGGATTAAAACAAAGAGATTAGGAGCTAGTTTAGCAATCGTCTTCCCTTGCAGCCATCTGTCACTCCAAAACTTGGTAATTTCTCCATTTCAAACTGTAGTTTTGAAAACATCAAAAAGGGAGTTTTGATGGATAAACCAGCCCAAGGCCTTGAAGAGTCTGTTTTTTTTAACCAAAGCCATCTCATGTGCAAAGCCCACCCCATCTTTTCAAGATTAAGAATACCAAGTTCTCCCAAAGATAGGGGCCGACACACTCGGTCCCAACAAACCAAGCAGTTCCCATGGGTTCCATGTACAATACAAATTAACTACGTAATTAATTGAGACAATACAAATTAATT ] [+] EMBL CA764260 [ AACTGAAACCCCATGCCCCCCCATGTCCCAAGTTGGATCCGCCGGTGAGGGATCCAATTCCATGGCGGCTGCTCCTCCTCCTCGCCTCCTCCTCCTCGTCGTCCTCCTCCTCGTGCCAGTCTCCAACGCCATCTACTGCGACGAGGATGATTGCTATGATCTTCTTGGAGTCAAGCAGGACGCGAACGTATCGGAGATCAAGAAAGCCTACTACAAGCTCTCTCTCAAACACCATCCGGATAAGAATCCTGATCCGGAGTCACGGAAGCTGTTTGTCAAGATTGCCAATGCTTACGAGATTCTAAAAGACGAATCAACTAGGGGGCAATATGACTATGCTATTGCACATCCAGAGGAGGTTTTCTACAACACTGCTCAGTACTATAGGGCATACTATGGCCATAAAACGGATCCTCGTGCTGTGTTAATTGGCCTTCTTCTAATTATTTCAGCATTTCAATACTTAAACCAGTTCGGAAGGTATAGTAAGGCCATAGAAACTGTGAAGCAAACTCCTGCTTACAAAAATAGGTTAAAAGCATTGGAGTTTGAGCGAACAGGAGGAATTTCAAGCAAAAAGAAGGGTCACAAGCAGATGGATAAGAAAGTCGAAGAAGTGCTAAGTAACGAAGTTGAGGTGCAGATCCAGGGGGGTTGAAAAACCTTNCTTATGGAGACTCTATGGNGGTCAGNTTATACTTTCTGNCATATTCCATAGGCAAGGNGCTCAGTTGGNAAATTTGGTGGNTTTGGAGATACCGGGTNAAGAAATTACCATACGCATGGGGAGGATGCATGCTACTTGACTTNGGTGNCTCTTAA ANACCCGGCTAATACATGGGGAAAATATTGGTGATTNTAGGGAAGGAGAATCTTG ] [+] EMBL CB646927 [ AAACCCCATGCCCCCCCATGTCCCAAGTTGGATCCGCCGGTGAGGGATCCAATTCCATGGCGGCTGCTCCTCCTCCTCGCCTCCTCCTCCTCGTCGTCCTCCTCCTCGTGCCAGTCTCCAACGCCATCTACTGCGAGGAGGATGATTGCTATGATCTTCTAGGAGTCAAGCAGGACGCGAACGTATCGGAGATCAAGAAAGCCTACTACAAGCTCTCTCTCAAACACCATCCGGATAAGAATCCTGATCCGGAGTCACGGAAGCTGTTTGTCAAGATTGCCAATGCTTACGAGATTCTAAAAGACGAATCAACTAGGGGGCAATATGACTATGCTATTGCACATCCAGAGGAGGTTTTCTACAACACTGCTCAGTACTATAGGGCATACTATGGCCATAAAACGGATCCTCGTGCTGTGTTAATTGGCCTTCTTCTAATTATTTCAGCATTTCAATACTTAAACCAGTTCGGAAGGTATAGTAAGGCCATAGAAACTGTGAAGCAAACTCCTGCTTACAAAAATAGGTTAAAAGCATTGGAGTTTGAGCGAACAGGAGGAATTTCAAGCAAAAAGAAGGGTCACAAGCAGATGGATAAGAAAGTTGAAGAAGTGCTAAGTAACGAAGTTGAGTTGCAGATCCA GGGGGTTGAAAAACCTTCCTTATGGAGACTCTATGGTGTTCAGTTTATAC TTCTGCCATATTCCATAGGCAAGGTGCTCAGTTGGAAATTTTGTTGGTTTTGGAGATACCGGATAAAGAAATTACCATATGCAT GGGAGGATGCATGCTACTTG ] [-] EMBL CB646928 [ GGCAAGGTGCTCAGTTGGAAATTTTGTTGGTTTTGGAGATACCGGATAAAGAAATTACCATATGCAT GGGAGGATGCATGCTACTTGACTCGGATGTCTCTTAAGATA CCTGCTAATACAT GGGAAAATATTGATGATTATA GGAAGGAGAATCTTGTCATGAAACGCCTCTGGGAAAAGAACAATATGGAGAGGTATATTGCAGAGATGAGAAAGGAATCAAAGCGTAGAAGGATAGCTGTAGCATATTCAACAAGAACGTGGACCGAGAACCCCCTGGATGTCAGCAACCC AACTCCTATTTGTCAAAGCTTGTGTCACAGTACGTTGCTTTATTGCCCTTTTAGGGATTAAAACAAAGAGATTAGGAGCTAGTTTAGCAATCGTCTTCCCTTGCAGCCATCTGTCACTCCAAAACTTGGTAATTTCTCCATTTCAAACTGTAGTTTTGAAAACATCAAAAAGGGAGTTTTGATGGATAAACCAGCCCAAGGCCTTGAAGAGTCTGTTTTTTTTAACCAAAGCCATCTCATGTGCAAAGCCCACCCCATCTTTTCAAGATTAAGAATACCAAGTTCTCCCAAAGATAGGGGCCGACACACTCGGTCCCAACAAACCAAGCAGTTCCCATGGGTTCCATGTACAATACAAATTAACTACGTAATTAATTGAGACAATACAAATTAATT ] [-] EMBL CA763354 [ TTTTGTTGGTTTTGGAGATACCGGATAAAGAAATTACCATACGCAT GGGAGGATGCATGCTACTTGACTNGGATGTCTCTTAAGATA CCTGCTAATACAT GGGAAAATATTGATGATTATA GGAAGGAGAATCTTGTCATGAAACGCCTCTGGGAAAAGAACAATATGGAGAGGTATATTGCAGAGATGAGAAAGGAATCAAAGCGTAGAA GATAGCTGTAGCATATTCAACAAGGACGTGGACCGAGAACCCCCTGGATGTCAGCAACCCAAACTCCTATTTGTCAAAGCTTGTGTGACAGTACGTTGCTTTATTGCCCTTTTAGGGATTAAAACAAAGAGATTAGGAGCTAGTTTAGCAATCGTCTTCCCTTGCAGCCATCTGTCACTCCAAAACTTGGTAATTTCTCCATTTCAAACTGTAGTTTTGAAAACATCAAAAAGGGTGTTTTGATGGATAAACCAGCCCAAGGCCTTGAAGAGTCTTTTTTTTTTAACCAAAGCCATCTCATGTGCAAAGCCCACCCCATCTTTTCAAGATTAAGAATACCAAGTTCTCCCAAAGATAGGGGCCGACACACTCGGTCCCAACAAACCAAGCAGTTCCCATGGGTTCCATGTACAATACAAATTAACTACGTAATTAATTGAGACAATACAAATTAATTAAAAAAAAA] [+] EMBL CF196299 [ TTGCCCTTTTAGGGATTAAAACAAAGAGATTAGGAGCTAGTTTAGCAATCGTCTTCCCTTGCAGCCATCTGTCACTCCAAAACTTGGTAATTTCTCCATTTCAAACTGTAGTTTTGAAAACATCAAAAAGGGAGTTTTGATGGATAAACCAGCCCAAGGCCTTGAAGAGTCTGTTTTTTTTAACCAAAGCCATCTCATGTGCAAAGCCCACCCCATCTTTTCAAGATTAAGAATACCAAGTTCTCCCAAAGATAGGGGCCGACACACTCGGTCCCAACAAACCAAGCAGTTCCCATGGGTTCCATGTACAATACAAATTAACTACGTAATTAATTGAGACAATACAAATTAA ] consensusID : consensus_12467#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 775 fasta sequence [TCTTTCTCCTTCATTCTCTCCCTACTTTTGCCTGGCATTTGCTTTGCGTTCGTTAACCCTAGATTATCTTAGATCTGGAAGAAGCTCTCTTAATTTTATAGAGACTTAACCTTAATACAAATAACAGATTGTTTGTTCCCCCAAAGTTTGGGGGTTCAACTGAAACCCCATGCCCCCCCATGTCCCAAGTTGGATCCGCCGGTGAGGGATCCAATTCCATGGCGGCTGCTCCTCCTCCTCGCCTCCTCCTCCTCGTCGTCCTCCTCCTCGTGCCAGTCTCCAACGCCATCTACTGCGAGGAGGATGATTGCTATGATCTTCTAGGAGTCAAGCAGGACGCGAACGTATCGGAGATCAAGAAAGCCTACTACAAGCTCTCTCTCAAACACCATCCGGATAAGAATCCTGATCCGGAGTCACGGAAGCTGTTTGTCAAGATTGCCAATGCTTACGAGGTTCTGTACGTTTTGTTATTCATGAATTAAAGTTTGCATTTCTTTCTGGCTGTGGTTGAGAACAATCTATGGTACCTAATATCTGATGCTTAATTCTAAATACTTGTTACTATTTTTCAATAGTTTCATAATTGCACCAACATAGTTGCTAATTGTACAGTTAATATTGAGCAATTCGTTGCATTAGCTAAAGTTTTGCGAAGAAAGAGTGCAGTAGAGTTTAAGCTTGAGTCCATCTGATTTTAATGGCTTTGTGAAATGCCACACTATGGTGTTCTTTCACTAATTTAGCTAATAAATCTGTTTTGTGAGCTCATTCA] [+] EMBL CB668959 [TCTTTCTCCTTCATTCTCTCCCTACTTTTGCCTGGCATTTGCTTTGCGTTCGTTAACCCTAGATTATCTTAGATCTGGAAGAAGCTCTCTTAATTTTATAGAGACTTAACCTTAATACAAATAACAGATTGTTTGTTCCCCCAAAGTTTGGGGGTTCAACTGAAACCCCATGCCCCCCCATGTCCCAAGTTGGATCCGCCGGTGAGGGATCCAATTCCATGGCGGCTGCTCCTCCTCCTCGCCTCCTCCTCCTCGTCGTCCTCCTCCTCGTGCCAGTCTCCAACGCCATCTACTGCGAGGAGGATGATTGCTATGATCTTCTAGGAGTCAAGCAGGACGCGAACGTATCGGAGATCAAGAAAGCCTACTACAAGCTCTCTCTCAAACACCATCCGGATAAGAATCCTGATCCGGAGTCACGGAAGCTGTTTGTCAAGATTGCCAATGCTTACGAGGTTCTGTACGTTTTGTTATTCATGAATTAAAGTTTGCATTTCTTTCTGGCTGTGGTTGAGAACAATCTATGGTACCTAATATCTGATGCTTAATTCTAAATACTTGTTACTATTTTTCAATAGTTTCATAATTGCACCAACATAGTTGCTAATTGTACAGTTAATATTGAGCAATTCGTTGCATTAGCTAAAGTTTTGCGAAGAAAGAGTGCAGTAGAGTTTAAGCTTGAGTCCATCTGATTTTAATGGCTTTGTGAAATGCCACACTATGGTGTTCTTTCACTAATTTAGCTAATAAATCTGTTTTGTGAGCTCATTCA] consensusID : consensus_12467#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 702 fasta sequence [AAAAGCATTGGAGTTTGAGGGAACAGGAGGAATTTCAAGCAAAAAGAAGGGTCCCAAGCAGATGGATAAGAAAGTTGAAGAAGTGCTAAGTAACGAAGTTGAGTTGCAGATCCAGGGGGTTGAAAAACCTTCCTTATGGAGACTTTATGGGGTTCAGTTTATACTTTTGCCATATTCCATAGGCAAGGGGGTCAGTTGGAAATTTTGTTGGTTTTGGAGATACCGGATAAAGAAATTTCCATATGCATGGGGGGATGCATGCTACTTGACTCGGATGTTTTTTAAGATACCTGCTAATACATGGGAAAATATTGATGATTATAGGAAGGGGAATTTTGTCATGAAACGCCTTTGGGAAAAGAACAATATGGAGAGGTATTTTGCAGAGATGAGAAAGGAATCAAAGGGTAGAAGATAGCTGTAGCATATTCAACAAGAACGTGGGCCGAGAACCCCCTGGATGTCAGCAACCCAACTCCTATTTGTCAAAGCTTGTGTCCCAGTACGTTGCTTTATTGCCCTTTTAGGGATTAAAACAAAGAGATTAGGAGGTAGTTTAGCAATTGTTTTCCCTTGCAGCCATTTGTCACTCCAAAACTTGGTAATTTTTCCATTTCAAACTGTAGTTTTGAAAACATCAAAAAGGGAGTTTTGTTGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATAAAAAGA] [-] EMBL CB668960 [AAAAGCATTGGAGTTTGAGGGAACAGGAGGAATTTCAAGCAAAAAGAAGGGTCCCAAGCAGATGGATAAGAAAGTTGAAGAAGTGCTAAGTAACGAAGTTGAGTTGCAGATCCAGGGGGTTGAAAAACCTTCCTTATGGAGACTTTATGGGGTTCAGTTTATACTTTTGCCATATTCCATAGGCAAGGGGGTCAGTTGGAAATTTTGTTGGTTTTGGAGATACCGGATAAAGAAATTTCCATATGCATGGGGGGATGCATGCTACTTGACTCGGATGTTTTTTAAGATACCTGCTAATACATGGGAAAATATTGATGATTATAGGAAGGGGAATTTTGTCATGAAACGCCTTTGGGAAAAGAACAATATGGAGAGGTATTTTGCAGAGATGAGAAAGGAATCAAAGGGTAGAAGATAGCTGTAGCATATTCAACAAGAACGTGGGCCGAGAACCCCCTGGATGTCAGCAACCCAACTCCTATTTGTCAAAGCTTGTGTCCCAGTACGTTGCTTTATTGCCCTTTTAGGGATTAAAACAAAGAGATTAGGAGGTAGTTTAGCAATTGTTTTCCCTTGCAGCCATTTGTCACTCCAAAACTTGGTAATTTTTCCATTTCAAACTGTAGTTTTGAAAACATCAAAAAGGGAGTTTTGTTGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATAAAAAGA] consensusID : consensus_12467#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence [TGGTGTTCAGTTAATACTTCGCCCATATCCCCATAGCCCAAGGGGTGGCCTCCAGTTTTGGAAATTTTGTTGTTTTGGAGATACCGGATAAAGAAATTACCATACGCATGGGAGGATGCATGCTACTTGACTCGGATGTCTCTTAAGATACCTGCTAATACATGGGAAAATATTTGATGATTATTAGGAAGGAGAATCTTGTCATGAAACGCCTCTGGGAAAAGAACAATATGGAGAGGTATATTTGCCAGAGATGAGAAAGGAATCAAGCGTAGAAGATAGCTGTAGCATATTCAACAAGAACGTGGACCGAGAACCCCCTGGATGTCACAACCCAACTCCTATTTGTCAAGCTTGTGTGACGTACGTTGCTTTATTCCCTTTTAGGGATTAAAACCAAGAGATTAGGAGCTAGTTTACCATCGTCTTCCCTCCACCCATCTGTCACTCCAAACTTGGTAATTTCCCATTCCCAACCTGTAGTTTTGAAAAACATCAAAAGGGTGTTTTGATGGATAAAAAAAA] [+] EMBL BI804482 [TGGTGTTCAGTTAATACTTCGCCCATATCCCCATAGCCCAAGGGGTGGCCTCCAGTTTTGGAAATTTTGTTGTTTTGGAGATACCGGATAAAGAAATTACCATACGCATGGGAGGATGCATGCTACTTGACTCGGATGTCTCTTAAGATACCTGCTAATACATGGGAAAATATTTGATGATTATTAGGAAGGAGAATCTTGTCATGAAACGCCTCTGGGAAAAGAACAATATGGAGAGGTATATTTGCCAGAGATGAGAAAGGAATCAAGCGTAGAAGATAGCTGTAGCATATTCAACAAGAACGTGGACCGAGAACCCCCTGGATGTCACAACCCAACTCCTATTTGTCAAGCTTGTGTGACGTACGTTGCTTTATTCCCTTTTAGGGATTAAAACCAAGAGATTAGGAGCTAGTTTACCATCGTCTTCCCTCCACCCATCTGTCACTCCAAACTTGGTAATTTCCCATTCCCAACCTGTAGTTTTGAAAAACATCAAAAGGGTGTTTTGATGGATAAAAAAAA] consensusID : consensus_12467#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 289 fasta sequence [TCTCCCGTCTCCGTATCCTCCGCTCCTTCGCCATCTCGCGGTCGCGGCTGAACAGGGGAGGGGGAGGGGCGCCGATCTCCATCTGGCGAGGAGAGCAGAGCAGGGGAGGGGATCCTGATTGTTTGTTCCCCCAAAGTTTGGGGGTTCAACTGAAACCCCATGCCCCCCCATGTCCCAAGTTGGATCCGNCGGTGAGGGATCCAATTCCATGGCGGCTGCTCCTCCTNNTCGCCTCCTNCTCCTCGTCGTCCTNCTCCTCGTGCCAGTNTGCAACGGCATCTACTGCGAN] [+] EMBL C28280 [TCTCCCGTCTCCGTATCCTCCGCTCCTTCGCCATCTCGCGGTCGCGGCTGAACAGGGGAGGGGGAGGGGCGCCGATCTCCATCTGGCGAGGAGAGCAGAGCAGGGGAGGGGATCCTGATTGTTTGTTCCCCCAAAGTTTGGGGGTTCAACTGAAACCCCATGCCCCCCCATGTCCCAAGTTGGATCCGNCGGTGAGGGATCCAATTCCATGGCGGCTGCTCCTCCTNNTCGCCTCCTNCTCCTCGTCGTCCTNCTCCTCGTGCCAGTNTGCAACGGCATCTACTGCGAN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 CACATCCTCTTTCTCATTCATTCTCTCCCTACTTTTGCCTGGCATTTGCTTTGCGTTCGT 60 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 TAACCCTAGATTATCTTAGATCTGGAAGAAGCTCTCTTAATTTTATAGAGACTTAACCTT 120 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 AATACAAATAACAGATTGTTTGTTCCCCCAAAGTTTGGGGGTTCAACTGAAACCCCATGC 180 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 CCCCCCATGTCCCAAGTTGGATCCGCCGGTGAGGGATCCAATTCCATGGCGGCTGCTCCT 240 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 CCTCCTCGCCTCCTCCTCCTCGTCGTCCTCCTCCTCGTGCCAGTCTCCAACGCCATCTAC 300 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 TGCGAGGAGGATGATTGCTATGATCTTCTAGGAGTCAAGCAGGACGCGAACGTATCGGAG 360 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 ATCAAGAAAGCCTACTACAAGCTCTCTCTCAAACACCATCCGGATAAGAATCCTGATCCG 420 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 GAGTCACGGAAGCTGTTTGTCAAGATTGCCAATGCTTACGAGATTCTAAAAGACGAATCA 480 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 ACTAGGGGGCAATATGACTATGCTATTGCACATCCAGAGGAGGTTTTCTACAACACTGCT 540 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 CAGTACTATAGGGCATACTATGGCCATAAAACGGATCCTCGTGCTGTGTTAATTGGCCTT 600 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 CTTCTAATTATTTCAGCATTTCAATACTTAAACCAGTTCGGAAGGTATAGTAAGGCCATA 660 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 --------------------------------------AAAAGCATTGGAGTTTGAGGGA 22 consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 GAAACTGTGAAGCAAACTCCTGCTTACAAAAATAGGTTAAAAGCATTGGAGTTTGAGCGA 720 consensus_12467#1 ------------------------------------------------------------ consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ACAGGAGGAATTTCAAGCAAAAAGAAGGGTCCCAAGCAGATGGATAAGAAAGTTGAAGAA 82 consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 ACAGGAGGAATTTCAAGCAAAAAGAAGGGTCACAAGCAGATGGATAAGAAAGTTGAAGAA 780 consensus_12467#1 ------------TCTTTCTCCTTCATTCTCTCCCTACTTTTGCCTGGCATTTGCTTTGCG 48 consensus_12467#4 ------------TCTCCCGTCTCCGTATCCTCCGCTCCTTCGCC--------ATCTCGCG 40 consensus_12467#2 GTGCTAAGTAACGAAGTTGAGTTGCAGATCCAGGGGGTTGAAAAACCTTCCTTATGGAGA 142 consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 GTGCTAAGTAACGAAGTTGAGTTGCAGATCCAGGGGGTTGAAAAACCTTCCTTATGGAGA 840 consensus_12467#1 TTCGTTAACC-CTAGATTATCTTAGATCTGGAAGAAGCTCTCTTAATTTTATA--GAGAC 105 consensus_12467#4 GTCGCGG-----CTGAACAGGGGAGGGGGAGGGGCGCCGATCTCCATCTGGCGAGGAGAG 95 consensus_12467#2 CTTTATGGGGTTCAGTTTATACTTTTGCCATATTCC-ATAGGCAAGGGGGT------CAG 195 consensus_12467#3 -----TGGTGTTCAGTTAATACTTCGCCCATATCCCCATAGCCCAAGGGGTGGCCTCCAG 55 consensus_12467#0 CTCTATGGTGTTCAGTTTATACTTCTGCCATATTCC-ATAGGCAAGGTGCT------CAG 893 consensus_12467#1 TTAACCTTAATACAAATAACAGATTGTTTGTTCCCCCAAAGTTTGGGGGTTCAACTGAAA 165 consensus_12467#4 CAGAGCAGGGGAGGGGATCCTGATTGTTTGTTCCCCCAAAGTTTGGGGGTTCAACTGAAA 155 * * ** * ** * * * * consensus_12467#2 TT--GGAAATTTTGTTGGTTTTGGAGATACCGGATAAAGAAATTTCCATATGCATGGGGG 253 consensus_12467#3 TTTTGGAAATTTTGTTG-TTTTGGAGATACCGGATAAAGAAATTACCATACGCATGGGAG 114 consensus_12467#0 TT--GGAAATTTTGTTGGTTTTGGAGATACCGGATAAAGAAATTACCATATGCATGGGAG 951 consensus_12467#1 CCCCATGCCCCCCCATGTCCCAAGTTGGATCCGCCGGTGAGGGATCCAATTCCATGGC-G 224 consensus_12467#4 CCCCATGCCCCCCCATGTCCCAAGTTGGATCCGNCGGTGAGGGATCCAATTCCATGGC-G 214 ** * * * * ** *** ***** * consensus_12467#2 GATGCATGCTACTTGACTCGGATGTTTTTTAAGATACCTGCTAATACATGGGAAAATATT 313 consensus_12467#3 GATGCATGCTACTTGACTCGGATGTCTCTTAAGATACCTGCTAATACATGGGAAAATATT 174 consensus_12467#0 GATGCATGCTACTTGACTCGGATGTCTCTTAAGATACCTGCTAATACATGGGAAAATATT 1011 consensus_12467#1 GCTGC-TCCTCCTC--CTCGCCTCCTCCTCCTCGT-CGTCCTCCTCCTCGTGCCAGTCTC 280 consensus_12467#4 GCTGC-TCCTCCTN--NTCGCCTCCTNCTCCTCGT-CGTCCTNCTCCTCGTGCCAGTNTG 270 * *** * ** ** *** * * * * * ** * * * * * * * consensus_12467#2 -GATGATTAT-AGGAAGGGGAATTTTGTCATGAAACGCCTTTGGGAAAAGAACAATATGG 371 consensus_12467#3 TGATGATTATTAGGAAGGAGAATCTTGTCATGAAACGCCTCTGGGAAAAGAACAATATGG 234 consensus_12467#0 -GATGATTAT-AGGAAGGAGAATCTTGTCATGAAACGCCTCTGGGAAAAGAACAATATGG 1069 consensus_12467#1 CAACGCCATCTACTGCGAGGAGGATGATTGCTATGATCTTCTAGGAGTCAAGCAGGACGC 340 consensus_12467#4 CAACGGCATCTACTGCGAN----------------------------------------- 289 * * * * consensus_12467#2 AGAGGTAT-TTTGC-AGAGATGAGAAAGGAATCAAAGGGTAGAAGATAGCTGTAGCATAT 429 consensus_12467#3 AGAGGTATATTTGCCAGAGATGAGAAAGGAATCAA-GCGTAGAAGATAGCTGTAGCATAT 293 consensus_12467#0 AGAGGTAT-ATTGC-AGAGATGAGAAAGGAATCAAAGCGTAGAAGATAGCTGTAGCATAT 1127 consensus_12467#1 GAACGTATCGGAGATCAAGAAAGCCTACTACAAGCTCTCTCTCAAACACCATCCGGATAA 400 consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 TCAACAAGAACGTGGGCCGAGAACCCCCTGGAT----GTCAGCAACCCAACTCCTATTTG 485 consensus_12467#3 TCAACAAGAACGTGGACCGAGAACCCCCTGGAT----GTCA-CAACCCAACTCCTATTTG 348 consensus_12467#0 TCAACAAGAACGTGGACCGAGAACCCCCTGGAT----GTCAGCAACCCAACTCCTATTTG 1183 consensus_12467#1 GAATCCTGATCCGGAGTCACGGAAGCTGTTTGTCAAGATTGCCAATGCTTACGAGGTTCT 460 consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 TCAAAGCTTGTGTCCCAGTACGTTGCTTTATTGCCCTTTTAGGGATTAAAACAAAGAGAT 545 consensus_12467#3 TCAA-GCTTGTGTGAC-GTACGTTGCTTTATT-CCCTTTTAGGGATTAAAACCAAGAGAT 405 consensus_12467#0 TCAAAGCTTGTGTCACAGTACGTTGCTTTATTGCCCTTTTAGGGATTAAAACAAAGAGAT 1243 consensus_12467#1 GTACGTTTTGTTATTCATGAATTAAAGTTTGCATTTCTTTCTGGCTGTGGTTGAGAACAA 520 consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 TAGGAGGTAGTTTAGCAATTGTTTTCCCTTGCAGCCATTTGTCACT------CCAAAACT 599 consensus_12467#3 TAGGAGCTAGTTTACCA-TCGTCTTCCCTC-CACCCATCTGTCACT------CCAAA-CT 456 consensus_12467#0 TAGGAGCTAGTTTAGCAATCGTCTTCCCTTGCAGCCATCTGTCACT------CCAAAACT 1297 consensus_12467#1 TCTATGGTACCTAATATCTGATGCTTAATTCTAAATACTTGTTACTATTTTTCAATAGTT 580 consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 TGGTAATTTTTCCATTTCAAACTGTAGTTTTGAAAACATCAAAAAGGGAGTTTTGTTGGA 659 consensus_12467#3 TGGTAATTTCCCATTCCCAACCTGTAGTTTTGAAAAACATCAAAAGGGTGTTTTGATGGA 516 consensus_12467#0 TGGTAATTTCTCCATTTCAAACTGTAGTTTTGAAAACATCAAAAAGGGAGTTTTGATGGA 1357 consensus_12467#1 TCATAATTGCACCAACATAGTTGCTAATTGTACAGTTAATATTGAGCAATTCGTTGCATT 640 consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATAAAAAGA----------------- 702 consensus_12467#3 TAAAAAAAA--------------------------------------------------- 525 consensus_12467#0 TAAACCAGCCCAAGGCCTTGAAGAGTCTGTTTTTTTTAACCAAAGCCATCTCATGTGCAA 1417 consensus_12467#1 AGCTAAAGTTTTGCGAAGAAAGAGTGCAGTAGAGTTTAAGCTTGAGTCCATCTGATTTTA 700 consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 AGCCCACCCCATCTTTTCAAGATTAAGAATACCAAGTTCTCCCAAAGATAGGGGCCGACA 1477 consensus_12467#1 ATGGCTTTGTGAAATGCCACACTATGGTGTTCTTTCACTAATTTAGCTAATAAATCTGTT 760 consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 ------------------------------------------------------------ consensus_12467#3 ------------------------------------------------------------ consensus_12467#0 CACTCGGTCCCAACAAACCAAGCAGTTCCCATGGGTTCCATGTACAATACAAATTAACTA 1537 consensus_12467#1 TTGTGAGCTCATTCA--------------------------------------------- 775 consensus_12467#4 ------------------------------------------------------------ consensus_12467#2 --------------------------------------- consensus_12467#3 --------------------------------------- consensus_12467#0 CGTAATTAATTGAGACAATACAAATTAATTAAAAAAAAA 1576 consensus_12467#1 --------------------------------------- consensus_12467#4 --------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||