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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1247 cluster # 1247       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1247#0 length = 884 sequences # 2  

consensusID : consensus_1247#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 884
fasta sequence
                              [CTTCCGGTGAGCNGCNGANATNTNCNGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCTGGTTACGGTGCCGAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAG-GCTGAACCCACACCAGGCCATCTTGGCGAGCG-CATNCCCCGATGAGTAGGAGGGCGCGGCGGCCGCCGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAACCATCGAAATGCATCACGAACAAATGCAAGAAGCTGTCCCTGGAGACAACATTGGTTTCAACTGCAAGAACATCTCCGTCAAGGACGTCAGAAGAGGTTTCGTTTGCGGTGACGCAAAGAACGATCCACCAAAGGGATGCGCTGACTTCAATGCACAAGTCATCGTCCTTAACCACCCTGGTCAAATCGCACAAGGATACTGCCCAGTCTTGGATTGCCACACCTCCCACATTGCATGCAAGTTCTCCGAACTCGTCTCCTTGATCGACAAGAGAACTGGTAAGGCAACTGAAGAAAACCCAAAGGCTATCAAGAACGGTCAAGCAGCTATTGTCAAGCTCGTTCCATCCAAGCCACTGTGTGTTGAAACCTTCACTGACTACCCACCTCTTGGCAGATTCGCAGTCCGCGACATGAGACAAACTGTTGCAGTTGGTGTCATCAAATCAGTCACCAAGAAGGAAAAGTAAGCTCCTGAACGCTTATAAAATTTTGTGTT]

[+] EMBL AU069647             [CTTCCGGTGAGCNGCNGANATNTNCNGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCTGGTTACGGTGCCGAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAG GCTGAACCCACACCAGGCCATCTTGGCGAGCG CATNCCCCGATGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK108986             [                                                    TAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCTGGTTACGGTGCCGAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCCACACCAGGCCATCTGGGCGAGCGCCATGCCCCGATGAGTAGGAGGGCGCGGCGGCCGCCGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAACCATCGAAATGCATCACGAACAAATGCAAGAAGCTGTCCCTGGAGACAACATTGGTTTCAACTGCAAGAACATCTCCGTCAAGGACGTCAGAAGAGGTTTCGTTTGCGGTGACGCAAAGAACGATCCACCAAAGGGATGCGCTGACTTCAATGCACAAGTCATCGTCCTTAACCACCCTGGTCAAATCGCACAAGGATACTGCCCAGTCTTGGATTGCCACACCTCCCACATTGCATGCAAGTTCTCCGAACTCGTCTCCTTGATCGACAAGAGAACTGGTAAGGCAACTGAAGAAAACCCAAAGGCTATCAAGAACGGTCAAGCAGCTATTGTCAAGCTCGTTCCATCCAAGCCACTGTGTGTTGAAACCTTCACTGACTACCCACCTCTTGGCAGATTCGCAGTCCGCGACATGAGACAAACTGTTGCAGTTGGTGTCATCAAATCAGTCACCAAGAAGGAAAAGTAAGCTCCTGAACGCTTATAAAATTTTGTGTT]


>consensus_1247#0 CTTCCGGTGAGCNGCNGANATNTNCNGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGA ACTGGCGATGCGGGATGAACCGGAAGCCTGGTTACGGTGCCGAACTGCGCGCTAACCTAG AACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATC CGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGC TGAAGGCTGAACCCACACCAGGCCATCTTGGCGAGCGCATNCCCCGATGAGTAGGAGGGC GCGGCGGCCGCCGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATC TTGGTGGTAGTAGCAAATATTCAAACCATCGAAATGCATCACGAACAAATGCAAGAAGCT GTCCCTGGAGACAACATTGGTTTCAACTGCAAGAACATCTCCGTCAAGGACGTCAGAAGA GGTTTCGTTTGCGGTGACGCAAAGAACGATCCACCAAAGGGATGCGCTGACTTCAATGCA CAAGTCATCGTCCTTAACCACCCTGGTCAAATCGCACAAGGATACTGCCCAGTCTTGGAT TGCCACACCTCCCACATTGCATGCAAGTTCTCCGAACTCGTCTCCTTGATCGACAAGAGA ACTGGTAAGGCAACTGAAGAAAACCCAAAGGCTATCAAGAACGGTCAAGCAGCTATTGTC AAGCTCGTTCCATCCAAGCCACTGTGTGTTGAAACCTTCACTGACTACCCACCTCTTGGC AGATTCGCAGTCCGCGACATGAGACAAACTGTTGCAGTTGGTGTCATCAAATCAGTCACC AAGAAGGAAAAGTAAGCTCCTGAACGCTTATAAAATTTTGTGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)