Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12470 cluster # 12470       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12470#0 length = 2314 sequences # 5  
consensus_12470#1 length = 1155 sequences # 1  
consensus_12470#2 length = 777 sequences # 2  
consensus_12470#3 length = 739 sequences # 1  
consensus_12470#4 length = 524 sequences # 1  

consensusID : consensus_12470#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2314
fasta sequence
                              [AGTTAGGGTGTTGAGTCGAAACAACAGTCGCCGAACTCGTCGGCAAAATCCCTCCGGTGAAGCTCCCAAACCCAACCACTCCTATCCCTCAATGCCGGCGGCGATGGCCGGCGGCACAGGCGGCGCTGGCGGCGGCGGCGGTAGGGCCCTCGATTGCCGCAGCTTCTGGAAGGCCGGCGCGTTCGAGTCCGCCTCCGCCCCCTCCCGCGAGTTCCACGATGCGCTTGTGGCAGGGGATTTCGATCGCGCGCGCGTTCACCCCAAGTTTCTGCACACCAACGCGACCTCTCACAAGTGGGCATTCGGAGCTATAGCTGAACTTCTTGACAATGCAGTAGATGAGATATGCAATGGTGCCACATTTATAAAAGTGGATAAAAGCGTCAACCTGAAAGACAATAGCACAATGCTGGTTTTTCAAGATGATGGAGGAGGAATGGATCCTGAAGGGGTACGACGATGCATGAGTTTAGGATTCTCAACCAAGAAATCAAAGAAAACCATTGGCCAGTATGGAAATGGCTTTAAGACAAGCACGATGAGACTTGGTGCTGATGCAATAGTGTTTACTCGCGCAAACCGTGGAAGTAATGTTACCTTGAGTATTGGTTTGCTCTCTTACA-CTTTCTTGAGGAGAACAATGAAAGACGACATAGTTGTTCCCATGCTCGATTTTAAAATCCAAGATGGCCACATTGTACCTTTGGTGTATGGTTCACAGGGTGATTGGGATAGCAGCTTGAAGATAATACTAGAGTGGTCCCCTTTTTCTTCAAAGGAAGAACTGCTACAACAGTTCAAGGATATTGTTAGTCATGGAACTAAGGTGGCAATATACAATTTATGGATGAACGATGATGGTCTTTTAGAACTTGACTTCGAGGATGATGATGAGGACATATTACTCAGAGATCAAGATAAAGCCAGTGGGGGAGTAACAAAGGCCCAAAAAGAAATTGTTCAGCAACATATATCCCACAGACTCAGATTTTCATTGCGAGCATATACTTCCATCCTTTACCTTAAGAAGTTTGAAAATTTCCAAATTATATTAAGAGGAAAACCCGTTGAACAGATCAGGATTGCTGATGAACTGAAATTTAAGAAATTAGTTACTTACAAACCTCAAGTTGCACATGATTCTCAAGTGGTCTCAGTGAAAGTCGATGTTGGCTTTGCAAAGGAGGCACCTGTTCTGGGGATTTTTGGGATGAATGTTTACCATAAAAATCGGCTAATAATGCCCTTCTGGAAGGTCCTTCAAGAGGGATCTAGTAGAGGAAGAAGTGTTGTCGGTGTACTGGAGGCAAATTTTATTGAGCCGGCACATGACAAACAAGATTTTGAGAGAACCCCACTATTCATTCGACTAGAAGCTAAGCTTAGACAGATTATCCTTGATTATTGGAAAGAAAAGTGTCATTTAATAGGTTACCAGCCAGTGGATCCACAATTAAGATCCCAGTATAAGGCTGCTCTCAAAGATTCAGGGAATCCTGGACCTAAGTCTCAGCAGAAAGCTTCCACTAGTAGGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATACCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTTGGGGAGCTAGAGCAACAAATAGCGGAGACAAAAAAGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATCTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCAGACTCAAATCCCATGCAGATTACTGTCCATCGCATTTTTTGCGTACTGTTCCATTCCACACCAGAGTACGGGTTTTTTTTATTTATGGTTGAACCTATAACAATGGCAATGCAACCTGAATGAAAACACTAGTGAGATGAGATTCCTGAATGAC]

[+] EMBL AK068615             [AGTTAGGGTGTTGAGTCGAAACAACAGTCGCCGAACTCGTCGGCAAAATCCCTCCGGTGAAGCTCCCAAACCCAACCACTCCTATCCCTCAATGCCGGCGGCGATGGCCGGCGGCACAGGCGGCGCTGGCGGCGGCGGCGGTAGGGCCCTCGATTGCCGCAGCTTCTGGAAGGCCGGCGCGTTCGAGTCCGCCTCCGCCCCCTCCCGCGAGTTCCACGATGCGCTTGTGGCAGGGGATTTCGATCGCGCGCGCGTTCACCCCAAGTTTCTGCACACCAACGCGACCTCTCACAAGTGGGCATTCGGAGCTATAGCTGAACTTCTTGACAATGCAGTAGATGAGATATGCAATGGTGCCACATTTATAAAAGTGGATAAAAGCGTCAACCTGAAAGACAATAGCACAATGCTGGTTTTTCAAGATGATGGAGGAGGAATGGATCCTGAAGGGGTACGACGATGCATGAGTTTAGGATTCTCAACCAAGAAATCAAAGAAAACCATTGGCCAGTATGGAAATGGCTTTAAGACAAGCACGATGAGACTTGGTGCTGATGCAATAGTGTTTACTCGCGCAAACCGTGGAAGTAATGTTACCTTGAGTATTGGTTTGCTCTCTTACA CTTTCTTGAGGAGAACAATGAAAGACGACATAGTTGTTCCCATGCTCGATTTTAAAATCCAAGATGGCCACATTGTACCTTTGGTGTATGGTTCACAGGGTGATTGGGATAGCAGCTTGAAGATAATACTAGAGTGGTCCCCTTTTTCTTCAAAGGAAGAACTGCTACAACAGTTCAAGGATATTGTTAGTCATGGAACTAAGGTGGCAATATACAATTTATGGATGAACGATGATGGTCTTTTAGAACTTGACTTCGAGGATGATGATGAGGACATATTACTCAGAGATCAAGATAAAGCCAGTGGGGGAGTAACAAAGGCCCAAAAAGAAATTGTTCAGCAACATATATCCCACAGACTCAGATTTTCATTGCGAGCATATACTTCCATCCTTTACCTTAAGAAGTTTGAAAATTTCCAAATTATATTAAGAGGAAAACCCGTTGAACAGATCAGGATTGCTGATGAACTGAAATTTAAGAAATTAGTTACTTACAAACCTCAAGTTGCACATGATTCTCAAGTGGTCTCAGTGAAAGTCGATGTTGGCTTTGCAAAGGAGGCACCTGTTCTGGGGATTTTTGGGATGAATGTTTACCATAAAAATCGGCTAATAATGCCCTTCTGGAAGGTCCTTCAAGAGGGATCTAGTAGAGGAAGAAGTGTTGTCGGTGTACTGGAGGCAAATTTTATTGAGCCGGCACATGACAAACAAGATTTTGAGAGAACCCCACTATTCATTCGACTAGAAGCTAAGCTTAGACAGATTATCCTTGATTATTGGAAAGAAAAGTGTCATTTAATAGGTTACCAGCCAGTGGATCCACAATTAAGATCCCAGTATAAGGCTGCTCTCAAAGATTCAGGGAATCCTGGACCTAAGTCTCAGCAGAAAGCTTCCACTAGTAGGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATACCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTTGGGGAGCTAGAGCAACAAATAGCGGAGACAAAAAAGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATCTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCAGACTCAAATCCCATGCAGATTACTGTCCATCGCATTTTTTGCGTACTGTTCCATTCCACACCAGAGTACGGGTTTTTTTTATTTATGGTTGAACCTATAACAATGGCAATGCAACCTGAATGAAAACACTAGTGAGATGAGATTCCTGAATGAC]
[+] EMBL CB653542             [                  AAACCACAGTCGCCGAACTCGTCGGCAAAATCCCTCCGGTGAAGCTCCCAAACCCAACCACTCCTATCCCTCAATGCCGGCGGCGATGGCCGGCGGCACAGGCGGCGCTGGCGGCGGCGGCGGTAGGGCCCTCGATTGCCGCAGCTTCTGGAAGGCCGGCGCGTTCGAGTCCGCCTCCGCCCCCTCCCGCGAGTTCCACGATGCGCTTGTGGCAGGGGATTTCGATCGCGCGCGCGTTCACCCCAAGTTTCTGCACACCAACGCGACCTCTCACAAGTGGGCATTCGGAGCTATAGCTGAACTTCTTGACAATGCAGTAGATAAGATATGCAATGGTGCCACATTTATAAAAGTGGATAAAAGCGTCAACCTGAAAGACAATAGCACAATGCTGGTTTTTCAAGATGATGGAGGAGGAATGGATCCTGAAGGGGTACGACGATGCATGAGTTTAGGATTCTCAACCAAGAAATCAAAGAAAACCATTGGCCAGTATGGAAATGGCTTTAAGACAAGCACGATGAGACTTGGTGCTGATGCAATAGTGTTTACTCGCGCAAACCGTGGAAGTAATGTTACCTTGAGTATTGGTTTGCTCTCTTACACCTTTCTTGAGGAGAACAATGAAAGACGACATAGTTGTTCCCATGCTCGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB630126             [                                      GTCGGCTTAATCCCTCCGGTGAAGCTCCCAAACCCAACCACCCCTATCCCTCAATGCCGGCGGCGATGGCCGGCGGCACCGGCGGCGCTGGCGGCGGCGGCGGTAGGGCCCTCGATTGCCGCAGCTTCTGGAAGGCCGGCGCGTTCGAGTCCGCCTCCGCCCCCTCCCGCGAGTTCCACGATGCGCTTGAGGCAGGGGATTTCGATCGCGCGCGCGTTCACCCCAAGTTTCTGCACACCAACGCGACCTCTCACAAGTGGGCATTCGGAGCTATAGCTGAACTTCTTGACAATGCAGTAGATGAGATATGCAATGGTGCCACATTTATAAAAGTGGATAAAAGCGTCAACCTGAAAGACAATAGCACAATGCTGGTTTTTCAAGATGATGGAGGAGGAATGGATCCTGAAGGGGTACGACGATGCATGAGTTTAGGATTCTCAACCAAGAAATCAAAGAAAACCATTGGCCAGTATGGAAATGGCTTTAAGACAAGCACGATGAGACTTGGTGCTGATGCAATAGTGTTTACTCGCGCAAACCGTGGAAGTAATGTTACCTTGAGTATTGGTTTGCTCTCTTACA CTTTCTTGAGGAGAACAATGAAAGACGACATAGTTGTTCCCATGCTCGATTTTAAAATCCAAGATGGCCACATTGTACCTTTGGTGTATGGTTCACAGGGTGATTGGGATAGCAGCTTGAAGATAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB238491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTGCAAAGGAGGCACCTGTTCTGGGGATTTTTGGGATGAATGTTTACCATAAAAATCGGCTAATAATGCCCTTCTGGAAGGTCCTTCAAGAGGGATCTAGTAGAGGAAGAAGTGTTGTCGGTGTACTGGAGGCAAATTTTATTGAGCCGGCACATGACAAACAAGATTTTGAGAGAACCCCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB630127             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAAGGCTGCTCTCAAAGATTCAGGGAATCCTGGACCTAAGTCTCAGCAGAAAGCTTCCACTAGTAGGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATACCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTCGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAGGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAATTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATCTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCAGACTCAAATCCCATGCAGATTACTGTCCATCGCATTTTTTGCGTACTGTTCCATTCCACACCAGAGTACGGGTTTTTTTTATTTATGGTTGAACCTATAACAATGGCAATGCAACCTGAATGAAAACACTAGTGAGATGA              ]


>consensus_12470#0 AGTTAGGGTGTTGAGTCGAAACAACAGTCGCCGAACTCGTCGGCAAAATCCCTCCGGTGA AGCTCCCAAACCCAACCACTCCTATCCCTCAATGCCGGCGGCGATGGCCGGCGGCACAGG CGGCGCTGGCGGCGGCGGCGGTAGGGCCCTCGATTGCCGCAGCTTCTGGAAGGCCGGCGC GTTCGAGTCCGCCTCCGCCCCCTCCCGCGAGTTCCACGATGCGCTTGTGGCAGGGGATTT CGATCGCGCGCGCGTTCACCCCAAGTTTCTGCACACCAACGCGACCTCTCACAAGTGGGC ATTCGGAGCTATAGCTGAACTTCTTGACAATGCAGTAGATGAGATATGCAATGGTGCCAC ATTTATAAAAGTGGATAAAAGCGTCAACCTGAAAGACAATAGCACAATGCTGGTTTTTCA AGATGATGGAGGAGGAATGGATCCTGAAGGGGTACGACGATGCATGAGTTTAGGATTCTC AACCAAGAAATCAAAGAAAACCATTGGCCAGTATGGAAATGGCTTTAAGACAAGCACGAT GAGACTTGGTGCTGATGCAATAGTGTTTACTCGCGCAAACCGTGGAAGTAATGTTACCTT GAGTATTGGTTTGCTCTCTTACACTTTCTTGAGGAGAACAATGAAAGACGACATAGTTGT TCCCATGCTCGATTTTAAAATCCAAGATGGCCACATTGTACCTTTGGTGTATGGTTCACA GGGTGATTGGGATAGCAGCTTGAAGATAATACTAGAGTGGTCCCCTTTTTCTTCAAAGGA AGAACTGCTACAACAGTTCAAGGATATTGTTAGTCATGGAACTAAGGTGGCAATATACAA TTTATGGATGAACGATGATGGTCTTTTAGAACTTGACTTCGAGGATGATGATGAGGACAT ATTACTCAGAGATCAAGATAAAGCCAGTGGGGGAGTAACAAAGGCCCAAAAAGAAATTGT TCAGCAACATATATCCCACAGACTCAGATTTTCATTGCGAGCATATACTTCCATCCTTTA CCTTAAGAAGTTTGAAAATTTCCAAATTATATTAAGAGGAAAACCCGTTGAACAGATCAG GATTGCTGATGAACTGAAATTTAAGAAATTAGTTACTTACAAACCTCAAGTTGCACATGA TTCTCAAGTGGTCTCAGTGAAAGTCGATGTTGGCTTTGCAAAGGAGGCACCTGTTCTGGG GATTTTTGGGATGAATGTTTACCATAAAAATCGGCTAATAATGCCCTTCTGGAAGGTCCT TCAAGAGGGATCTAGTAGAGGAAGAAGTGTTGTCGGTGTACTGGAGGCAAATTTTATTGA GCCGGCACATGACAAACAAGATTTTGAGAGAACCCCACTATTCATTCGACTAGAAGCTAA GCTTAGACAGATTATCCTTGATTATTGGAAAGAAAAGTGTCATTTAATAGGTTACCAGCC AGTGGATCCACAATTAAGATCCCAGTATAAGGCTGCTCTCAAAGATTCAGGGAATCCTGG ACCTAAGTCTCAGCAGAAAGCTTCCACTAGTAGGAGGACAGGAGGGCATACATCAAATTT GCTACCAGAGACATATGATGATACCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTC TCGCGTACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGA GAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAG TGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTT GAGGCAAACGGTTGGGGAGCTAGAGCAACAAATAGCGGAGACAAAAAAGAAGTGTGCTCA GCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATA AAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCT GATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTAATCCAGCAGTA CAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATC TGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCA GACTCAAATCCCATGCAGATTACTGTCCATCGCATTTTTTGCGTACTGTTCCATTCCACA CCAGAGTACGGGTTTTTTTTATTTATGGTTGAACCTATAACAATGGCAATGCAACCTGAA TGAAAACACTAGTGAGATGAGATTCCTGAATGAC



consensusID : consensus_12470#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1155
fasta sequence
                              [TAGGTAGTTCTTTGTGTATTCATATGATGCCAATTATATGGGACACTACTATAAATCAGGCACCAGATTTTCTCTCAAAAATCGGGCTGTCAAATGTTTCAGTTGACCACCGGTGAAACGCTAAGTTGTACATAGTGAAACAAAAAAAATGTCTCTGTAACATTTACAAATTTTGTGAAACACCTGTCGAAACATTTAACCATCACGTATGAAACATTGAATTTCAACAATTGAACATAAGTTTTTCTTTCATCAGAATATAATCATGTGATATCTCCTTGTAAAGGTTTAATTACCACGAATACAACGGTATATGGGTTGTAGATTGGAGAAATAATTTAGGTGAGAAATCGTTTTAAGCTAGCTAAAAAGTTTGCATGCTTGCATGCAAGAAATATGGAGAAGAGAGTAAACTGCTTGCATGTAGGAGAGGAGACAGGCTAGTGCATGCACATGCAGTGGCTGGACAGTTTGGACATGCAGCAGCCGGGCAACAGCATGCCCAATCTTTGTGGCTTTGATCGGGCGCCTGAGCAGAAGCATTGTTGAACTATATGTTAGACTTTTATAGCTATGATAATATTTTTTGCTGATTAATTATCTTATCCCTCTTAGAGCATATGAAACACACTGATATTTTAGTTTGCTTTGAATTTTATGTGGTATTCAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTTGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAAGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATCTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCAGACTCA]

[+] EMBL AK058820             [TAGGTAGTTCTTTGTGTATTCATATGATGCCAATTATATGGGACACTACTATAAATCAGGCACCAGATTTTCTCTCAAAAATCGGGCTGTCAAATGTTTCAGTTGACCACCGGTGAAACGCTAAGTTGTACATAGTGAAACAAAAAAAATGTCTCTGTAACATTTACAAATTTTGTGAAACACCTGTCGAAACATTTAACCATCACGTATGAAACATTGAATTTCAACAATTGAACATAAGTTTTTCTTTCATCAGAATATAATCATGTGATATCTCCTTGTAAAGGTTTAATTACCACGAATACAACGGTATATGGGTTGTAGATTGGAGAAATAATTTAGGTGAGAAATCGTTTTAAGCTAGCTAAAAAGTTTGCATGCTTGCATGCAAGAAATATGGAGAAGAGAGTAAACTGCTTGCATGTAGGAGAGGAGACAGGCTAGTGCATGCACATGCAGTGGCTGGACAGTTTGGACATGCAGCAGCCGGGCAACAGCATGCCCAATCTTTGTGGCTTTGATCGGGCGCCTGAGCAGAAGCATTGTTGAACTATATGTTAGACTTTTATAGCTATGATAATATTTTTTGCTGATTAATTATCTTATCCCTCTTAGAGCATATGAAACACACTGATATTTTAGTTTGCTTTGAATTTTATGTGGTATTCAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTTGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAAGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATCTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCAGACTCA]


>consensus_12470#1 TAGGTAGTTCTTTGTGTATTCATATGATGCCAATTATATGGGACACTACTATAAATCAGG CACCAGATTTTCTCTCAAAAATCGGGCTGTCAAATGTTTCAGTTGACCACCGGTGAAACG CTAAGTTGTACATAGTGAAACAAAAAAAATGTCTCTGTAACATTTACAAATTTTGTGAAA CACCTGTCGAAACATTTAACCATCACGTATGAAACATTGAATTTCAACAATTGAACATAA GTTTTTCTTTCATCAGAATATAATCATGTGATATCTCCTTGTAAAGGTTTAATTACCACG AATACAACGGTATATGGGTTGTAGATTGGAGAAATAATTTAGGTGAGAAATCGTTTTAAG CTAGCTAAAAAGTTTGCATGCTTGCATGCAAGAAATATGGAGAAGAGAGTAAACTGCTTG CATGTAGGAGAGGAGACAGGCTAGTGCATGCACATGCAGTGGCTGGACAGTTTGGACATG CAGCAGCCGGGCAACAGCATGCCCAATCTTTGTGGCTTTGATCGGGCGCCTGAGCAGAAG CATTGTTGAACTATATGTTAGACTTTTATAGCTATGATAATATTTTTTGCTGATTAATTA TCTTATCCCTCTTAGAGCATATGAAACACACTGATATTTTAGTTTGCTTTGAATTTTATG TGGTATTCAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGA AAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGA TACACAGTTGAGGCAAACGGTTGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAAGAA GTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCC TTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTG TGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTAAT CCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGC TACGGTATCTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTG TAATTATCAGACTCA



consensusID : consensus_12470#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 777
fasta sequence
                              [ACGAGTGGGACTGAACTTTACTCCCCANTGNGCTCCCAAATGATGTTCTAGCAAATGCATATCGCATCTCAAGAGAAGAGGCTCNNAGGCTCAAGTCTCACNAAAGAGATTCCTCTAGTANGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATACCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCANTNTATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTCGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAAGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGA-CCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGANCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATTTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCAGACTCAAATCCCATGCAAAAAAAAAAAAAA]

[+] EMBL AA751602             [ACGAGTGGGACTGAACTTTACTCCCCANTGNGCTCCCAAATGATGTTCTAGCAAATGCATATCGCATCTCAAGAGAAGAGGCTCNNAGGCTCAAGTCTCACNAAAGAGATTCCTCTAGTANGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATACCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCANTNTATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTCGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAAGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGA CCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGANCA                                                                                                                                                                                                                                                       ]
[-] EMBL CA759245             [                                                                                                                        gGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATACCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTCGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAAGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATTTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCAGACTCAAATCCCATGCAAAAAAAAAAAAAA]


>consensus_12470#2 ACGAGTGGGACTGAACTTTACTCCCCANTGNGCTCCCAAATGATGTTCTAGCAAATGCAT ATCGCATCTCAAGAGAAGAGGCTCNNAGGCTCAAGTCTCACNAAAGAGATTCCTCTAGTA NGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATACCGAAGTCA TTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAGCTCAAGAAA ACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCANTNTATATTGGCTCTGAAGGTGCAC TTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTG AAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTCGGGGAGCTAGAGCAACAAC TAGCGGAGACAAAAAAGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGACCA GCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGANCACAGAGGTGCT AACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTA GGTTAGCTCATAGTTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAA AATCGAGTCCACCAATGCTACGGTATTTGATGTATAGATGAAGTGACTTCTGTGACTCGT GCTGATGTGCTTCAACTGTAATTATCAGACTCAAATCCCATGCAAAAAAAAAAAAAA



consensusID : consensus_12470#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 739
fasta sequence
                              [AGTATAAGGCTGCTCTCAAAGATTCAGGGAATCCTGGACCTAAGTCTCAGCAGAAAGCTTCCACTAGTAGGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATACCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTCGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAGGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAATTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATCTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCGGACTCAAATCCCATGCAGATTACTGTCAAAAAAAAAAAAGGA]

[-] EMBL CB631858             [AGTATAAGGCTGCTCTCAAAGATTCAGGGAATCCTGGACCTAAGTCTCAGCAGAAAGCTTCCACTAGTAGGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATACCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTCGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAGGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAATTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATCTGATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCGGACTCAAATCCCATGCAGATTACTGTCAAAAAAAAAAAAGGA]


>consensus_12470#3 AGTATAAGGCTGCTCTCAAAGATTCAGGGAATCCTGGACCTAAGTCTCAGCAGAAAGCTT CCACTAGTAGGAGGACAGGAGGGCATACATCAAATTTGCTACCAGAGACATATGATGATA CCGAAGTCATTGGACTGACAGCCAATGGTTCAGGTTCTCGCGTACGATCATTTGGCCAAG CTCAAGAAAACAGTATGGAGCCAGTAGGCTTGGATGAGAATTCAGTAGATATTGGCTCTG AAGGTGCACTTGATCCCTATATCATGGAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCA CAAGGCGTGAAGAACTTCGACAACGAGATACACAGTTGAGGCAAACGGTCGGGGAGCTAG AGCAACAACTAGCGGAGACAAAAAGGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAA GGAAGAGCCAGCAGCAGCAGCAGCCCCCTTACATATAAAGGTTAATTTATCGGTGGACCA CAGAGGTGCTAACAAACGACCAAAGGTGTGATGTGCTGATCTTGCTAGCAATTTTGCCAG TAGAAAAGTAGGTTAGCTCATAATTAATCCAGCAGTACAGTCACGTCAAAGAACTGTAGA AGTAAGTTAAAATCGAGTCCACCAATGCTACGGTATCTGATGTATAGATGAAGTGACTTC TGTGACTCGTGCTGATGTGCTTCAACTGTAATTATCGGACTCAAATCCCATGCAGATTAC TGTCAAAAAAAAAAAAGGA



consensusID : consensus_12470#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 524
fasta sequence
                              [CTAGCTCCTTCGGAAGNTGAAAANCGTCTNTCCAGCGGANACTGCACGAATACCATGAGCACGTGGAGTGACACAACTACCGACAAAAAGAAGGGCTCANCTTCTGATACCTGCGTATNAGGAAGACCACCCCCCNCCGCCCCCTACATATAAAGGTTAATTTATCGGTGGACCCCAGAGGTGCTAACCAACGACCCAAGGTGTGATGTGCTGATCTTGCTACCATTTGCCCGTAGAAAAGTAGGTTAGCTCATAGTTAATCCCCCGTCCGTCACGTCAAGACTGTAGAAGTAAGTTAAAATCGAGTCCCCCCATGCTCGGTATCTTGATGTATAGATGAAGTGACTTCTGTGACTCGGCTGATGTGCTTCAACGGTAATTATCAGACTCAATCCCACAGATTCTGCCCATCGCATTTTTGCGTACTGTCCATCCCACACCCAGAGACGGGTTTTTTTTATTTATGGTGAACCTANACAATGCCAACACACCGGAAGGAAACACTAGGGAGATGAGATCCTGGA]

[+] EMBL BI806045             [CTAGCTCCTTCGGAAGNTGAAAANCGTCTNTCCAGCGGANACTGCACGAATACCATGAGCACGTGGAGTGACACAACTACCGACAAAAAGAAGGGCTCANCTTCTGATACCTGCGTATNAGGAAGACCACCCCCCNCCGCCCCCTACATATAAAGGTTAATTTATCGGTGGACCCCAGAGGTGCTAACCAACGACCCAAGGTGTGATGTGCTGATCTTGCTACCATTTGCCCGTAGAAAAGTAGGTTAGCTCATAGTTAATCCCCCGTCCGTCACGTCAAGACTGTAGAAGTAAGTTAAAATCGAGTCCCCCCATGCTCGGTATCTTGATGTATAGATGAAGTGACTTCTGTGACTCGGCTGATGTGCTTCAACGGTAATTATCAGACTCAATCCCACAGATTCTGCCCATCGCATTTTTGCGTACTGTCCATCCCACACCCAGAGACGGGTTTTTTTTATTTATGGTGAACCTANACAATGCCAACACACCGGAAGGAAACACTAGGGAGATGAGATCCTGGA]


>consensus_12470#4 CTAGCTCCTTCGGAAGNTGAAAANCGTCTNTCCAGCGGANACTGCACGAATACCATGAGC ACGTGGAGTGACACAACTACCGACAAAAAGAAGGGCTCANCTTCTGATACCTGCGTATNA GGAAGACCACCCCCCNCCGCCCCCTACATATAAAGGTTAATTTATCGGTGGACCCCAGAG GTGCTAACCAACGACCCAAGGTGTGATGTGCTGATCTTGCTACCATTTGCCCGTAGAAAA GTAGGTTAGCTCATAGTTAATCCCCCGTCCGTCACGTCAAGACTGTAGAAGTAAGTTAAA ATCGAGTCCCCCCATGCTCGGTATCTTGATGTATAGATGAAGTGACTTCTGTGACTCGGC TGATGTGCTTCAACGGTAATTATCAGACTCAATCCCACAGATTCTGCCCATCGCATTTTT GCGTACTGTCCATCCCACACCCAGAGACGGGTTTTTTTTATTTATGGTGAACCTANACAA TGCCAACACACCGGAAGGAAACACTAGGGAGATGAGATCCTGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12470#0      AGTTAGGGTGTTGAGTCGAAACAACAGTCGCCGAACTCGTCGGCAAAATCCCTCCGGTGA 60
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      AGCTCCCAAACCCAACCACTCCTATCCCTCAATGCCGGCGGCGATGGCCGGCGGCACAGG 120
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      CGGCGCTGGCGGCGGCGGCGGTAGGGCCCTCGATTGCCGCAGCTTCTGGAAGGCCGGCGC 180
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      GTTCGAGTCCGCCTCCGCCCCCTCCCGCGAGTTCCACGATGCGCTTGTGGCAGGGGATTT 240
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      CGATCGCGCGCGCGTTCACCCCAAGTTTCTGCACACCAACGCGACCTCTCACAAGTGGGC 300
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      ATTCGGAGCTATAGCTGAACTTCTTGACAATGCAGTAGATGAGATATGCAATGGTGCCAC 360
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      ATTTATAAAAGTGGATAAAAGCGTCAACCTGAAAGACAATAGCACAATGCTGGTTTTTCA 420
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      AGATGATGGAGGAGGAATGGATCCTGAAGGGGTACGACGATGCATGAGTTTAGGATTCTC 480
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      AACCAAGAAATCAAAGAAAACCATTGGCCAGTATGGAAATGGCTTTAAGACAAGCACGAT 540
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      GAGACTTGGTGCTGATGCAATAGTGTTTACTCGCGCAAACCGTGGAAGTAATGTTACCTT 600
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      GAGTATTGGTTTGCTCTCTTACACTTTCTTGAGGAGAACAATGAAAGACGACATAGTTGT 660
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      TCCCATGCTCGATTTTAAAATCCAAGATGGCCACATTGTACCTTTGGTGTATGGTTCACA 720
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      GGGTGATTGGGATAGCAGCTTGAAGATAATACTAGAGTGGTCCCCTTTTTCTTCAAAGGA 780
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      AGAACTGCTACAACAGTTCAAGGATATTGTTAGTCATGGAACTAAGGTGGCAATATACAA 840
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      TTTATGGATGAACGATGATGGTCTTTTAGAACTTGACTTCGAGGATGATGATGAGGACAT 900
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      ATTACTCAGAGATCAAGATAAAGCCAGTGGGGGAGTAACAAAGGCCCAAAAAGAAATTGT 960
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      TCAGCAACATATATCCCACAGACTCAGATTTTCATTGCGAGCATATACTTCCATCCTTTA 1020
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      CCTTAAGAAGTTTGAAAATTTCCAAATTATATTAAGAGGAAAACCCGTTGAACAGATCAG 1080
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      --TAGGTAGTTCTTTGTGTATTCATATGATGCCAATTATATGGGACACTACTATAAATCA 58
                                                                                   

consensus_12470#0      GATTGCTGATGAACTGAAATTTAAGAAATTAGTTACTTACAAACCTCAAGTTGCACATGA 1140
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      GGCACCAGATTTTCTCTCAAAAATCGGGCTGTCAAATGTTTCAGTTGACCACCGGTGAAA 118
                                                                                   

consensus_12470#0      TTCTCAAGTGGTCTCAGTGAAAGTCGATGTTGGCTTTGCAAAGGAGGCACCTGTTCTGGG 1200
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      CGCTAAGTTGTACATAGTGAAACAAAAAAAATGTCTCTGTAACATTTACAAATTTTGTGA 178
                                                                                   

consensus_12470#0      GATTTTTGGGATGAATGTTTACCATAAAAATCGGCTAATAATGCCCTTCTGGAAGGTCCT 1260
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      AACACCTGTCGAAACATTTAACCATCACGTATGAAACATTGAATTTCAACAATTGAACAT 238
                                                                                   

consensus_12470#0      TCAAGAGGGATCTAGTAGAGGAAGAAGTGTTGTCGGTGTACTGGAGGCAAATTTTATTGA 1320
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      AAGTTTTTCTTTCATCAGAATATAATCATGTGATATCTCCTTGTAAAGGTTTAATTACCA 298
                                                                                   

consensus_12470#0      GCCGGCACATGACAAACAAGATTTTGAGAGAACCCCACTATTCATTCGACTAGAAGCTAA 1380
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      CGAATACAACGGTATATGGGTTGTAGATTGGAGAAATAATTTAGGTGAGAAATCGTTTTA 358
                                                                                   

consensus_12470#0      GCTTAGACAGATTATCCTTGATTATTGGAAAGAAAAGTGTCATTTAATAGGTTACCAGCC 1440
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      --------------------------------ACGAGTGGGACTGAACT--TTACTCCCC 26
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      AGCTAGCTAAAAAGTTTGCATGCTTGCATGCAAGAAATATGGAGAAGAGAGTAAACTGCT 418
                                                                                   

consensus_12470#0      AGTGGATCCACAATTA---AGATCCCAGTATAAG---GCTGCTCTCAAAGATTCAGGGAA 1494
consensus_12470#3      --------------------------AGTATAAG---GCTGCTCTCAAAGATTCAGGGAA 31
consensus_12470#2      ANTGNGCTCCCAAATG---ATGTTCTAGCAAATGCATATCGCATCTCAAGAGA-AGAGGC 82
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      TGCATGTAGGAGAGGAGACAGGCTAGTGCATGCACATGCAGTGGCTGGACAGTTTGGACA 478
                                                                                   

consensus_12470#0      TCCTGGACCTAAGTCTCAGCAGAAAGCTTCCACTAGTAGGAGGACAGGAGGGCATACATC 1554
consensus_12470#3      TCCTGGACCTAAGTCTCAGCAGAAAGCTTCCACTAGTAGGAGGACAGGAGGGCATACATC 91
consensus_12470#2      TCNNAGGCTCAAGTCTCACNAAAGAGATTCCTCTAGTANGAGGACAGGAGGGCATACATC 142
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      TGCAGCAGCCGGGCAACAGCATGCCCAATCTTTGTGGCTTTGATCGGGCGCCTGAGCAGA 538
                                                                                   

consensus_12470#0      AAATTTGCTACCAGAGACATATGA-TGATACCGAAGTCATTGGACTGACAGCCAATGGTT 1613
consensus_12470#3      AAATTTGCTACCAGAGACATATGA-TGATACCGAAGTCATTGGACTGACAGCCAATGGTT 150
consensus_12470#2      AAATTTGCTACCAGAGACATATGA-TGATACCGAAGTCATTGGACTGACAGCCAATGGTT 201
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      AGCATTGTTGAACTATATGTTAGACTTTTATAGCTATGATAATATTTTTTGCTGATTAAT 598
                                                                                   

consensus_12470#0      CAGGTTCTCGCG-TACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGC 1672
consensus_12470#3      CAGGTTCTCGCG-TACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGC 209
consensus_12470#2      CAGGTTCTCGCG-TACGATCATTTGGCCAAGCTCAAGAAAACAGTATGGAGCCAGTAGGC 260
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      TATCTTATCCCTCTTAGAGCATATGAAACACACTGATATTTTAGTTTGCTTTGAATTTTA 658
                                                                                   

consensus_12470#0      TTGGATG---AGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATG 1729
consensus_12470#3      TTGGATG---AGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATG 266
consensus_12470#2      TTGGATG---AGAATTCANTNTATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATG 317
consensus_12470#4      ------------------------------------------------------------
consensus_12470#1      TGTGGTATTCAGAATTCAGTAGATATTGGCTCTGAAGGTGCACTTGATCCCTATATCATG 718
                                                                                   

consensus_12470#0      GAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGA 1789
consensus_12470#3      GAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGA 326
consensus_12470#2      GAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGA 377
consensus_12470#4      ----------------------CTAGCTCCTTCGGAAGNTGAAAANCGTCTNTCCAGCGG 38
consensus_12470#1      GAAAAGCTGAGTGAAGAAAACATCGGTCTGTTCACAAGGCGTGAAGAACTTCGACAACGA 778
                                                *    ***  ***  *  **     *   ** ** 

consensus_12470#0      GATACACAGTTGAGGCAAACGGTTGGGGAGCTAGAGCAACAAATAGCGGAGACAAAAAAG 1849
consensus_12470#3      GATACACAGTTGAGGCAAACGGTCGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAGG 386
consensus_12470#2      GATACACAGTTGAGGCAAACGGTCGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAAG 437
consensus_12470#4      ANACTGCACGAATACCATGAGCACGTGGAGTGACA----CAACTACCG---ACAAAAAGA 91
consensus_12470#1      GATACACAGTTGAGGCAAACGGTTGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAAG 838
                             **       **   *   * ****  * *    *** ** **   *******  

consensus_12470#0      AAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCC 1909
consensus_12470#3      AAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCC 446
consensus_12470#2      AAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGA-CCAGCAGCAGCAGCAGCCC 496
consensus_12470#4      AGG---GCTCANCTT-CTGAT-ACCTGCGTATNAGGAAGA-CCACCCCCCNCCGC----C 141
consensus_12470#1      AAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGCCAGCAGCAGCAGCAGCCC 898
                       * *   ***** *** ***** ********** ******* *** *  *  * **    *

consensus_12470#0      CCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGG 1969
consensus_12470#3      CCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGG 506
consensus_12470#2      CCTTACATATAAAGGTTAATTTATCGGTGGANCACAGAGGTGCTAACAAACGACCAAAGG 556
consensus_12470#4      CCCTACATATAAAGGTTAATTTATCGGTGGACCCCAGAGGTGCTAACCAACGACCCAAGG 201
consensus_12470#1      CCTTACATATAAAGGTTAATTTATCGGTGGACCACAGAGGTGCTAACAAACGACCAAAGG 958
                       ** **************************** * ************* ******* ****

consensus_12470#0      TGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTA 2029
consensus_12470#3      TGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAATTA 566
consensus_12470#2      TGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTA 616
consensus_12470#4      TGTGATGTGCTGATCTTGCTACCA--TTTGCCCGTAGAAAAGTAGGTTAGCTCATAGTTA 259
consensus_12470#1      TGTGATGTGCTGATCTTGCTAGCAATTTTGCCAGTAGAAAAGTAGGTTAGCTCATAGTTA 1018
                       ********************* **  ****** *********************** ***

consensus_12470#0      ATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAAT 2089
consensus_12470#3      ATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAAT 626
consensus_12470#2      ATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAAT 676
consensus_12470#4      ATCCCCCG--TCCGTCACGTCAAG--ACTGTAGAAGTAAGTTAAAATCGAGTCCCCCCAT 315
consensus_12470#1      ATCCAGCAGTACAGTCACGTCAAAGAACTGTAGAAGTAAGTTAAAATCGAGTCCACCAAT 1078
                       ****  *    * **********   **************************** ** **

consensus_12470#0      GCTACGGTATCT-GATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAA 2148
consensus_12470#3      GCTACGGTATCT-GATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAA 685
consensus_12470#2      GCTACGGTATTT-GATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAA 735
consensus_12470#4      GCT-CGGTATCTTGATGTATAGATGAAGTGACTTCTGTGACTCG-GCTGATGTGCTTCAA 373
consensus_12470#1      GCTACGGTATCT-GATGTATAGATGAAGTGACTTCTGTGACTCGTGCTGATGTGCTTCAA 1137
                       *** ****** * ******************************* ***************

consensus_12470#0      CTGTAATTATCAGACTCAAATCCCATGCAGATTACTGTCCATCGCATTTTTTGCGTACTG 2208
consensus_12470#3      CTGTAATTATCGGACTCAAATCCCATGCAGATTACTGTCAAAAAAAAAAAAGGA------ 739
consensus_12470#2      CTGTAATTATCAGACTCAAATCCCATGCAAAAAAAAAAAAAA------------------ 777
consensus_12470#4      CGGTAATTATCAGACTCAA-TCCCA--CAGATT-CTGCCCATCGCATTTTT-GCGTACTG 428
consensus_12470#1      CTGTAATTATCAGACTCA------------------------------------------ 1155
                       * ********* ******                                          

consensus_12470#0      TTCCATTCCACACCAGAGTACGGGTTTTTTTTATTTATGGTTGAACCTATAACAATGGCA 2268
consensus_12470#3      ------------------------------------------------------------
consensus_12470#2      ------------------------------------------------------------
consensus_12470#4      T-CCATCCCACACCCAGAGACGGGTTTTTTTTATTTATGGTGAA--CCTANACAATGCCA 485
consensus_12470#1      ------------------------------------------------------------
                                                                                   

consensus_12470#0      ATGCAACCTGAATGAAAACACTAGTGAGATGAGATTCCTGAATGAC 2314
consensus_12470#3      ----------------------------------------------
consensus_12470#2      ----------------------------------------------
consensus_12470#4      ACACA--CCGGAAGGAAACACTAGGGAGATGAGATCCTGGA----- 524
consensus_12470#1      ----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)