cluster # 12490

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Oryza sativa
cluster # 12490 cluster # 12490 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12490#0 length = 2279 sequences # 7
consensus_12490#1 length = 1682 sequences # 1

consensus_12490#2 length = 1096 sequences # 1
consensus_12490#3 length = 642 sequences # 1

consensusID : consensus_12490#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2279
fasta sequence

                              [CGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCCCCTCCAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTAGGGTTTCGGGCCGCCGCGGCGTCCTCCTCCTCCTCCTCCTCTTGTTCTGGTGGTCAGCGGGGGCGCGCGTCCGATGTCGTCGGGGGCAGCGGCGTCGGCGGCGGGGGTGGAGGCGGGGGCGGCGGGGGGCGGGAAGGACGACGAGCTGGCTGATCTGGTGCGGCGCCTAGTGGACGCCCTCGCCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGGGATTTGTGGTGGTCCGTGGTGTAAAGGTGGCGCGCCTTGCTTGATTGTTTGTGGGGAAGGCTAGTCTTTTTTGTTTGGAACTATATTTTATACTGTGGCCATTCTACTATTGTTTAGTTGTTATTACATACATATGAGTTCGAAGCATCGATTTGGTAATTCGTTCTTAGCAGCTGTACAAGCTAGAAGCTGTAGTAAATTTTTAGGCGTGGATTCGCAGTTCGCTAATGATATGTCTCCCCTTTGGGAAATGTGGTCGTATTTGGGTCATTGTGATAGTTGAGATTTTGATGTATCCTTTAGGTTAGTAATAGGCTAATAGTGCTGCGAGAAATAGTTACTATGTAGAAGTGTTGGTTGGCCAGAAAGATGCAAACTTTTATGATGGCTTGCTTTATGTGATATCATCGAATGATCTACTTACCTCTATAGTCAGTTAATGAATCACTAAATAATTCGTTAATGGCATGTTGTCGTTTTGTAAGTTCTCTTGACTGTAGTGTTTTACAACGCTATTTCCAAGAACTCGGTAGTAATACAACGTGCAGATCCTAGGCTAGTAATGGATGCAAGCACAGGCATACACATGCGAACATGACATGTGCATGCACGGCGAGGTAAACCGATTTCTATGCTCAGAAATCTGCGCTACAACGTCATTAAAACGACTTTAGGTATCAAATCACGTGAAAGCACTTAAAAGTGCCGTAGCGCTCGAAAATCGACCTTCTGGGCCCTATGTTGCAACTTGCAACAGCATGAGCATTCATATTATTCCACAAAAGATTGTACTTGGTGTCAATTTTTAATCCCTTGTATCAGTCGTTGTTGTGGTTTGGATGAGTGAATTGGTGCCATTTTTTGTGATTTCTCACACACAAAGTCCGTTTTATTAATTCTTGCTACAAGAATTATTGAATTACTTCAATCTTCTATTTTAGAAACTTCGCTCATTTACTACACTTGCCGCAATTACAATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGCAACCTCGGAGGCCACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCACGGCCAGGTGCTTTGACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTGATTTTGGAGGAAACAACTCCAGAGGAGCTCCAGAACCATGTCACAGTGAGACCTTCTGTCCTGGAGGTTCTTCTAGAAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTGACGATGAAAGCGGAGAAAAGGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACA-GTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTGATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAACAATGGCATAGCGAGAA-CTGAGACGAACATCATTGTTCA-TTTTTTTT-CCTTGAATGATGGAACTCGTTTTTCTTGTA-CCATGTGTAAAAGTC-GTGTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATCAATTGTGTTCCTGTATAACCGAAATACTTAAAATTGTCATCCAGTTATTTGTTCGGCCAAAAAAAACAAAAAAAAGA]

[+] EMBL AK068625             [CGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCCCCTCCAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTAGGGTTTCGGGCCGCCGCGGCGTCCTCCTCCTCCTCCTCCTCTTGTTCTGGTGGTCAGCGGGGGCGCGCGTCCGATGTCGTCGGGGGCAGCGGCGTCGGCGGCGGGGGTGGAGGCGGGGGCGGCGGGGGGCGGGAAGGACGACGAGCTGGCTGATCTGGTGCGGCGCCTAGTGGACGCCCTCGCCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGGGATTTGTGGTGGTCCGTGGTGTAAAGGTGGCGCGCCTTGCTTGATTGTTTGTGGGGAAGGCTAGTCTTTTTTGTTTGGAACTATATTTTATACTGTGGCCATTCTACTATTGTTTAGTTGTTATTACATACATATGAGTTCGAAGCATCGATTTGGTAATTCGTTCTTAGCAGCTGTACAAGCTAGAAGCTGTAGTAAATTTTTAGGCGTGGATTCGCAGTTCGCTAATGATATGTCTCCCCTTTGGGAAATGTGGTCGTATTTGGGTCATTGTGATAGTTGAGATTTTGATGTATCCTTTAGGTTAGTAATAGGCTAATAGTGCTGCGAGAAATAGTTACTATGTAGAAGTGTTGGTTGGCCAGAAAGATGCAAACTTTTATGATGGCTTGCTTTATGTGATATCATCGAATGATCTACTTACCTCTATAGTCAGTTAATGAATCACTAAATAATTCGTTAATGGCATGTTGTCGTTTTGTAAGTTCTCTTGACTGTAGTGTTTTACAACGCTATTTCCAAGAACTCGGTAGTAATACAACGTGCAGATCCTAGGCTAGTAATGGATGCAAGCACAGGCATACACATGCGAACATGACATGTGCATGCACGGCGAGGTAAACCGATTTCTATGCTCAGAAATCTGCGCTACAACGTCATTAAAACGACTTTAGGTATCAAATCACGTGAAAGCACTTAAAAGTGCCGTAGCGCTCGAAAATCGACCTTCTGGGCCCTATGTTGCAACTTGCAACAGCATGAGCATTCATATTATTCCACAAAAGATTGTACTTGGTGTCAATTTTTAATCCCTTGTATCAGTCGTTGTTGTGGTTTGGATGAGTGAATTGGTGCCATTTTTTGTGATTTCTCACACACAAAGTCCGTTTTATTAATTCTTGCTACAAGAATTATTGAATTACTTCAATCTTCTATTTTAGAAACTTCGCTCATTTACTACACTTGCCGCAATTACAATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGCAACCTCGGAGGCCACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCACGGCCAGGTGCTTTGACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTGATTTTGGAGGAAACAACTCCAGAGGAGCTCCAGAACCATGTCACAGTGAGACCTTCTGTCCTGGAGGTTCTTCTAGAAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTGACGATGAAAGCGGAGAAAAGGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACA GTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTGATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAACAATGGCATAGCGAGAA CTGAGACGAACATCATTGTTCA TTTTTTTT CCTTGAATGATGGAACTCGTTTTTCTTGTA CCATGTGTAAAAGTC   GTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATCAATTGTGTTCCTGTATAACCGAAATACTTAAAATTGTCATCCAGTTATT                            ]
[+] EMBL CA763360             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTGATTTTGGAGGAAACAACTCCAGAGGAGCTCCAGAACCATGTCACAGTGAGACCTTCTGTCCTGGAGGTTCTTCTAGAAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTGACGATGAAAGCGGAGAAAAGGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACA GTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTGATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAACAATGGCATAGCGAGAA CTGAGACGAACATCATTGTTCA TTTTTTTT CCTTGAATGATGGAGCTCGTTTTTCTTGTA CCATGTGTAAAAGTC GTGTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATCAATTGTGTTCCTGTATAACCGAAATACTTAAAATTGTCATCCAGTTATTTGTTCGGCCAAAAAAAA           ]
[-] EMBL CB681840             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTGATTTTGGAGGAAACAACTCCAGAGGAGCTCCAGAACCATGTCACAGTGAGACCTTCTGTCCTGGAGGTTCTTCTAGAAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTGACGATGAAAGCGGAGAAAAGGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACA GTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTGATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAACAATGGCATAGCGAGAA CTGAGACGAACATCATTGTTCA TTTTTTTT CCTTGAATGATGGAACTCGTTTTTCTTGTA CCATGTGTAAAAGTC   GTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATCAATTGTGTTCCTGTATAACCGAAATACTTAAAATTGTCATCCAGTTATTTGTTCGGCCATTCATCCCAAAAAAAAGA]
[+] EMBL BM419834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTCTATCTGATGGAGCGCATTCTTGACGATGAAAGCGGAGAAAAGGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACACGTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTGATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAAC ATGGCATAGCGAGAA CTGAGACGAACATCATTGTTCA TTTTTTTT CCTTGAATGATGGAACTCGTTTTTCTTGTA CCATGTGTAAAAGTC GTGTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATCAATTGTGTTCCTGTATAACCGAAATACTTAAAATTGTCATCCAGTTtaaaaa                         ]
[+] EMBL BM419489             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGAGCGCATTCTTGACGATGAAAGCGGAGAAAAGGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACA GTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTGATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAAC ATGGCATAGCGAGAACCTGAGACGAACATCATTGTTCA TTTTTTTTCCCTTGAATGATGGAACTCGTTTTTCTTGTA CCATGTGTAAAAGTC GTGTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATC ATTGTGTTCCTGTATAACCGAAATACTTAAAATTGTCATCCAGTTAaaaa                          ]
[+] EMBL BM420845             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAACCATGGCATAGCGAGAA CTGAGACGAACATCATTGTTCACTTTTTTTT CCTTGAATGATGGAACTCGTTTTTCTTGTACCCATGTGTAAAANTC GTGTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATCAATTGTGTTCCTGTATAACCGAAATACTTAAAATTGTCACCCAGTTATTTGTTC GCCAAAAAAA            ]
[+] EMBL BI802303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAACTCGTTTTTCTTGTA CCATGTGTAAAAGTCAGTGTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCAGGTATCAATTGTGTTCCGGTATAACCGAAATACTT AAATTGTCATCCAGTTATTTGTTCGGCCAAAAAAAAaa         ]




>consensus_12490#0
CGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCCCCTC
CAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTA
GGGTTTCGGGCCGCCGCGGCGTCCTCCTCCTCCTCCTCCTCTTGTTCTGGTGGTCAGCGG
GGGCGCGCGTCCGATGTCGTCGGGGGCAGCGGCGTCGGCGGCGGGGGTGGAGGCGGGGGC
GGCGGGGGGCGGGAAGGACGACGAGCTGGCTGATCTGGTGCGGCGCCTAGTGGACGCCCT
CGCCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGGGATTTGTGGTGGTCCG
TGGTGTAAAGGTGGCGCGCCTTGCTTGATTGTTTGTGGGGAAGGCTAGTCTTTTTTGTTT
GGAACTATATTTTATACTGTGGCCATTCTACTATTGTTTAGTTGTTATTACATACATATG
AGTTCGAAGCATCGATTTGGTAATTCGTTCTTAGCAGCTGTACAAGCTAGAAGCTGTAGT
AAATTTTTAGGCGTGGATTCGCAGTTCGCTAATGATATGTCTCCCCTTTGGGAAATGTGG
TCGTATTTGGGTCATTGTGATAGTTGAGATTTTGATGTATCCTTTAGGTTAGTAATAGGC
TAATAGTGCTGCGAGAAATAGTTACTATGTAGAAGTGTTGGTTGGCCAGAAAGATGCAAA
CTTTTATGATGGCTTGCTTTATGTGATATCATCGAATGATCTACTTACCTCTATAGTCAG
TTAATGAATCACTAAATAATTCGTTAATGGCATGTTGTCGTTTTGTAAGTTCTCTTGACT
GTAGTGTTTTACAACGCTATTTCCAAGAACTCGGTAGTAATACAACGTGCAGATCCTAGG
CTAGTAATGGATGCAAGCACAGGCATACACATGCGAACATGACATGTGCATGCACGGCGA
GGTAAACCGATTTCTATGCTCAGAAATCTGCGCTACAACGTCATTAAAACGACTTTAGGT
ATCAAATCACGTGAAAGCACTTAAAAGTGCCGTAGCGCTCGAAAATCGACCTTCTGGGCC
CTATGTTGCAACTTGCAACAGCATGAGCATTCATATTATTCCACAAAAGATTGTACTTGG
TGTCAATTTTTAATCCCTTGTATCAGTCGTTGTTGTGGTTTGGATGAGTGAATTGGTGCC
ATTTTTTGTGATTTCTCACACACAAAGTCCGTTTTATTAATTCTTGCTACAAGAATTATT
GAATTACTTCAATCTTCTATTTTAGAAACTTCGCTCATTTACTACACTTGCCGCAATTAC
AATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGCAACCTCGGAGGCC
ACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCACGGCCAGGTGCTTT
GACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACCA
GCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAGG
ACGAAGGGTTACATGCCGGTTACTTGGTGTGATTTTGGAGGAAACAACTCCAGAGGAGCT
CCAGAACCATGTCACAGTGAGACCTTCTGTCCTGGAGGTTCTTCTAGAAATTGCAAAATT
CTGTGATGTCTATCTGATGGAGCGCATTCTTGACGATGAAAGCGGAGAAAAGGTGTTATC
TGCCCTGAGTGAAGCTGGACTTTTTACGAACAGTGGATTGATAAAGGACAAGGTTCTCTT
CTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTGATTGGCACAT
TGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATAT
TTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACA
ATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAACAATGGCA
TAGCGAGAACTGAGACGAACATCATTGTTCATTTTTTTTCCTTGAATGATGGAACTCGTT
TTTCTTGTACCATGTGTAAAAGTCGTGTGTCATGTTAAACTGGTTCTGCAACTCCCCATA
AGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATCAATTGTGTTCCTGTATAA
CCGAAATACTTAAAATTGTCATCCAGTTATTTGTTCGGCCAAAAAAAACAAAAAAAAGA

consensusID : consensus_12490#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1682
fasta sequence

                              [CCTCCGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCCCCTCCAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTAGGGTTTCGGGCCGCCGCGGCGTCCTCCTCCTCCTCCTCCTCTTGTTCTGGTGGTCAGCGGGGGCGCGCGTCCGATGTCGTCGGGGGCAGCGGCGTCGGCGGCGGGGGTGGAGGCGGGGGCGGCGGGGGGCGGGAAGGACGACGAGCTGGCTGATCTGGTGCGGCGCCTAGTGGACGCCCTCGCCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGGTTTGCCGCTCGGATCTGTGATCCCCCCCGTGTCGCGCGTGTGTTTTGCGGTGTTTTGATAATCTCTAGGTTTTCCTCGCTGTTTAGGGATTTGTGGTGGTCCGTGGTGTAAAGGTGGCGCGCCTTGCTTGATTGTTTGTGGGGAAGGCTAGTCTTTTTTGTTTGGAACTATATTTTATACTGTGGCCATTCTACTATTGTTTAGTTGTTATTACATACATATGAGTTCGAAGCATCGATTTGGTAATTCGTTCTTAGCAGCTGTACAAGCTAGAAGCTGTAGTAAATTTTTAGGCGTGGATTCGCAGTTCGCTAATGATATGTCTCCCTTTTGGGAAATGTGGTCGTATTTGGGTCATTGTGATAGTTGAGATTTTGATGTATCCTTTAGGTTAGTAATAGGCTAATAGTGCTGCGAGAAATAGTTACTATGTAGAAGTGTTGGTTGGCCAGAAAGATGCAAACTTTTATGATGGCTTGCTTTATGTGATATCATCGAATGATCTACTTACCTCTATAGTCAGTTAATGAATCACTAAATAATTCGTTAATGGCATGTTGTCGTTTTGTAAGTTCTCTTGACTGTAGTGTTTTACAACGCTATTTCCAAGAACTCGGTAGTAATACAACGTGCAGATCCTAGGCTAGTAATGGATGCAAGCACAGGCATACACATGCGAACATGACATGTGCATGCACGGCGAGGTAAACCGATTTCTATGCTCAGAAATCTGCGCTACAACGTCATTAAAACGACTTTAGGTATCAAATCACGTGAAAGCACTTAAAAGTGCCGTAGCGCTCGAAAATCGACCTTCTGGGCCCTATGTTGCAACTTGCAACAGCATGAGCATTCATATTATTCCACAAAAGATTGTACTTGGTGTCAATTTTTAATCCCTTGTATCAGTCGTTGTTGTGGTTTGGATGAGTGAATTGGTGCCATTTTTTGTGATTTCTCACACACAAAGTCCGTTTTATTAATTCTTGCTACAAGAATTATTGAATTACTTCAATCTTCTATTTTAGAAACTTCGCTCATTTACTACACTTGCCGCAATTACAATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGCAACCTCGGAGGCCACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCACGGCCAGGTGCTTTGACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTG]

[+] EMBL AK120653             [CCTCCGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCCCCTCCAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTAGGGTTTCGGGCCGCCGCGGCGTCCTCCTCCTCCTCCTCCTCTTGTTCTGGTGGTCAGCGGGGGCGCGCGTCCGATGTCGTCGGGGGCAGCGGCGTCGGCGGCGGGGGTGGAGGCGGGGGCGGCGGGGGGCGGGAAGGACGACGAGCTGGCTGATCTGGTGCGGCGCCTAGTGGACGCCCTCGCCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGGTTTGCCGCTCGGATCTGTGATCCCCCCCGTGTCGCGCGTGTGTTTTGCGGTGTTTTGATAATCTCTAGGTTTTCCTCGCTGTTTAGGGATTTGTGGTGGTCCGTGGTGTAAAGGTGGCGCGCCTTGCTTGATTGTTTGTGGGGAAGGCTAGTCTTTTTTGTTTGGAACTATATTTTATACTGTGGCCATTCTACTATTGTTTAGTTGTTATTACATACATATGAGTTCGAAGCATCGATTTGGTAATTCGTTCTTAGCAGCTGTACAAGCTAGAAGCTGTAGTAAATTTTTAGGCGTGGATTCGCAGTTCGCTAATGATATGTCTCCCTTTTGGGAAATGTGGTCGTATTTGGGTCATTGTGATAGTTGAGATTTTGATGTATCCTTTAGGTTAGTAATAGGCTAATAGTGCTGCGAGAAATAGTTACTATGTAGAAGTGTTGGTTGGCCAGAAAGATGCAAACTTTTATGATGGCTTGCTTTATGTGATATCATCGAATGATCTACTTACCTCTATAGTCAGTTAATGAATCACTAAATAATTCGTTAATGGCATGTTGTCGTTTTGTAAGTTCTCTTGACTGTAGTGTTTTACAACGCTATTTCCAAGAACTCGGTAGTAATACAACGTGCAGATCCTAGGCTAGTAATGGATGCAAGCACAGGCATACACATGCGAACATGACATGTGCATGCACGGCGAGGTAAACCGATTTCTATGCTCAGAAATCTGCGCTACAACGTCATTAAAACGACTTTAGGTATCAAATCACGTGAAAGCACTTAAAAGTGCCGTAGCGCTCGAAAATCGACCTTCTGGGCCCTATGTTGCAACTTGCAACAGCATGAGCATTCATATTATTCCACAAAAGATTGTACTTGGTGTCAATTTTTAATCCCTTGTATCAGTCGTTGTTGTGGTTTGGATGAGTGAATTGGTGCCATTTTTTGTGATTTCTCACACACAAAGTCCGTTTTATTAATTCTTGCTACAAGAATTATTGAATTACTTCAATCTTCTATTTTAGAAACTTCGCTCATTTACTACACTTGCCGCAATTACAATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGCAACCTCGGAGGCCACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCACGGCCAGGTGCTTTGACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTG]




>consensus_12490#1
CCTCCGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCC
CCTCCAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGC
GCTAGGGTTTCGGGCCGCCGCGGCGTCCTCCTCCTCCTCCTCCTCTTGTTCTGGTGGTCA
GCGGGGGCGCGCGTCCGATGTCGTCGGGGGCAGCGGCGTCGGCGGCGGGGGTGGAGGCGG
GGGCGGCGGGGGGCGGGAAGGACGACGAGCTGGCTGATCTGGTGCGGCGCCTAGTGGACG
CCCTCGCCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGGTTTGCCGCTCGG
ATCTGTGATCCCCCCCGTGTCGCGCGTGTGTTTTGCGGTGTTTTGATAATCTCTAGGTTT
TCCTCGCTGTTTAGGGATTTGTGGTGGTCCGTGGTGTAAAGGTGGCGCGCCTTGCTTGAT
TGTTTGTGGGGAAGGCTAGTCTTTTTTGTTTGGAACTATATTTTATACTGTGGCCATTCT
ACTATTGTTTAGTTGTTATTACATACATATGAGTTCGAAGCATCGATTTGGTAATTCGTT
CTTAGCAGCTGTACAAGCTAGAAGCTGTAGTAAATTTTTAGGCGTGGATTCGCAGTTCGC
TAATGATATGTCTCCCTTTTGGGAAATGTGGTCGTATTTGGGTCATTGTGATAGTTGAGA
TTTTGATGTATCCTTTAGGTTAGTAATAGGCTAATAGTGCTGCGAGAAATAGTTACTATG
TAGAAGTGTTGGTTGGCCAGAAAGATGCAAACTTTTATGATGGCTTGCTTTATGTGATAT
CATCGAATGATCTACTTACCTCTATAGTCAGTTAATGAATCACTAAATAATTCGTTAATG
GCATGTTGTCGTTTTGTAAGTTCTCTTGACTGTAGTGTTTTACAACGCTATTTCCAAGAA
CTCGGTAGTAATACAACGTGCAGATCCTAGGCTAGTAATGGATGCAAGCACAGGCATACA
CATGCGAACATGACATGTGCATGCACGGCGAGGTAAACCGATTTCTATGCTCAGAAATCT
GCGCTACAACGTCATTAAAACGACTTTAGGTATCAAATCACGTGAAAGCACTTAAAAGTG
CCGTAGCGCTCGAAAATCGACCTTCTGGGCCCTATGTTGCAACTTGCAACAGCATGAGCA
TTCATATTATTCCACAAAAGATTGTACTTGGTGTCAATTTTTAATCCCTTGTATCAGTCG
TTGTTGTGGTTTGGATGAGTGAATTGGTGCCATTTTTTGTGATTTCTCACACACAAAGTC
CGTTTTATTAATTCTTGCTACAAGAATTATTGAATTACTTCAATCTTCTATTTTAGAAAC
TTCGCTCATTTACTACACTTGCCGCAATTACAATCACACTTATCTTTGCCTGGAAACTGT
TGAGAGCTCCTCAAGAGCAACCTCGGAGGCCACGTAGACGCGTTGCTCCATCACCTAGCA
ACACCAGCAGTAGATCACGGCCAGGTGCTTTGACCTCAACGGATGCTTGTTCATCTTCAG
CAGATTCAAGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTG
AGCAGCTTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTG
TG

consensusID : consensus_12490#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1096
fasta sequence

                              [CGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCCCCTCCAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTAGGGTTTCGGGCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGAAACTTCGCTCATTTACTACACTTGCCGCAATTACAATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGCAACCTCGGAGGCCACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCACGGCCAGGTGCTTTGACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTGATTTTGGAGGAAACAACTCCAGAGGAGCTCCAGAACCATGTCACAGTGAGACCTTCTGTCCTGGAGGTTCTTCTAGAAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTGACGATGAAAGCGGAGAAAAGGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACAGTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTGATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAACAATGGCATAGCGAGAACTGAGACGAACATCATTGTTCATTTTTTTTCCTTGAATGATGGAACTCGTTTTTCTTGTACCATGTGTAAAAGTCGTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATCAATTGTGTTCC]

[+] EMBL AK059832             [CGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCCCCTCCAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTAGGGTTTCGGGCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGAAACTTCGCTCATTTACTACACTTGCCGCAATTACAATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGCAACCTCGGAGGCCACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCACGGCCAGGTGCTTTGACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTGATTTTGGAGGAAACAACTCCAGAGGAGCTCCAGAACCATGTCACAGTGAGACCTTCTGTCCTGGAGGTTCTTCTAGAAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTGACGATGAAAGCGGAGAAAAGGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACAGTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTGATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATGAGGTGAGCTCCAGCAAACAATGGCATAGCGAGAACTGAGACGAACATCATTGTTCATTTTTTTTCCTTGAATGATGGAACTCGTTTTTCTTGTACCATGTGTAAAAGTCGTGTCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCATGTATCAATTGTGTTCC]




>consensus_12490#2
CGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCCCCTC
CAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTA
GGGTTTCGGGCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGAAACTTCGCT
CATTTACTACACTTGCCGCAATTACAATCACACTTATCTTTGCCTGGAAACTGTTGAGAG
CTCCTCAAGAGCAACCTCGGAGGCCACGTAGACGCGTTGCTCCATCACCTAGCAACACCA
GCAGTAGATCACGGCCAGGTGCTTTGACCTCAACGGATGCTTGTTCATCTTCAGCAGATT
CAAGAGCACAGGAAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGC
TTGTTAGGCATAAACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTGATTT
TGGAGGAAACAACTCCAGAGGAGCTCCAGAACCATGTCACAGTGAGACCTTCTGTCCTGG
AGGTTCTTCTAGAAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTGACG
ATGAAAGCGGAGAAAAGGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACAGTG
GATTGATAAAGGACAAGGTTCTCTTCTGTAGTACAGAAAATGGCCGCACCTCTTTTGTGC
GGCAACTGGAACCTGATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTA
GGTTTATCAAATATCAACTACATATTTCTCCACAACGAGCAGAAAGAGTAGCATCCAATG
TTTTCAGCTCTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAGATGATAATATG
AGGTGAGCTCCAGCAAACAATGGCATAGCGAGAACTGAGACGAACATCATTGTTCATTTT
TTTTCCTTGAATGATGGAACTCGTTTTTCTTGTACCATGTGTAAAAGTCGTGTCATGTTA
AACTGGTTCTGCAACTCCCCATAAGCTATGGAAAGAGATAGCATCTGTAGCATAATCCAT
GTATCAATTGTGTTCC

consensusID : consensus_12490#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 642
fasta sequence

                              [GGAACCAACTCCAGAGGAGCTCCACACCCATGTCACAGTGAGACCTTCTGTCCTGGAGGTTCTTCTAGCAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTCCCGATGTAAGCGGAGAAAAGGTGTTATCTCCCCTGCGTGAAGCTGGACTTTTTACGACCAGTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTCCAGAAAATGGCCCCACCTCTTTTGTGCGGCAACTGGACCCTGATTGGCCCATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCCCAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGACCAATTCTTTGGAGCCCTTGATCAGAGATGATCATATGAGGTGAGCTCCAGCAACCAATGCCATAGCGAGAACTGAGCCGACCCTCATTGTTCATTCTTTTTCCTTCCATCATGGCACTCGTTTTTCTTGTACCATGTCTCCACGTCGTCCCGAATCCCTAGCGCTCCCGCTCCCCCCGTCGACGGCGAGGAGGAGGAGGAGGAGGAGGAGAAGATTTGGAGGGGGCGAAGTGTAAATTGTGCCGTCTCTTCTACGAGGGGGCG]

[-] EMBL CB681839             [GGAACCAACTCCAGAGGAGCTCCACACCCATGTCACAGTGAGACCTTCTGTCCTGGAGGTTCTTCTAGCAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTCCCGATGTAAGCGGAGAAAAGGTGTTATCTCCCCTGCGTGAAGCTGGACTTTTTACGACCAGTGGATTGATAAAGGACAAGGTTCTCTTCTGTAGTCCAGAAAATGGCCCCACCTCTTTTGTGCGGCAACTGGACCCTGATTGGCCCATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATCAACTACATATTTCTCCCCAACGAGCAGAAAGAGTAGCATCCAATGTTTTCAGCTCTACAAGCTTGGACCAATTCTTTGGAGCCCTTGATCAGAGATGATCATATGAGGTGAGCTCCAGCAACCAATGCCATAGCGAGAACTGAGCCGACCCTCATTGTTCATTCTTTTTCCTTCCATCATGGCACTCGTTTTTCTTGTACCATGTCTCCACGTCGTCCCGAATCCCTAGCGCTCCCGCTCCCCCCGTCGACGGCGAGGAGGAGGAGGAGGAGGAGGAGAAGATTTGGAGGGGGCGAAGTGTAAATTGTGCCGTCTCTTCTACGAGGGGGCG]




>consensus_12490#3
GGAACCAACTCCAGAGGAGCTCCACACCCATGTCACAGTGAGACCTTCTGTCCTGGAGGT
TCTTCTAGCAATTGCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTCCCGATGT
AAGCGGAGAAAAGGTGTTATCTCCCCTGCGTGAAGCTGGACTTTTTACGACCAGTGGATT
GATAAAGGACAAGGTTCTCTTCTGTAGTCCAGAAAATGGCCCCACCTCTTTTGTGCGGCA
ACTGGACCCTGATTGGCCCATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTT
TATCAAATATCAACTACATATTTCTCCCCAACGAGCAGAAAGAGTAGCATCCAATGTTTT
CAGCTCTACAAGCTTGGACCAATTCTTTGGAGCCCTTGATCAGAGATGATCATATGAGGT
GAGCTCCAGCAACCAATGCCATAGCGAGAACTGAGCCGACCCTCATTGTTCATTCTTTTT
CCTTCCATCATGGCACTCGTTTTTCTTGTACCATGTCTCCACGTCGTCCCGAATCCCTAG
CGCTCCCGCTCCCCCCGTCGACGGCGAGGAGGAGGAGGAGGAGGAGGAGAAGATTTGGAG
GGGGCGAAGTGTAAATTGTGCCGTCTCTTCTACGAGGGGGCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      CGACATGTCGCAGCCCGCCCCCTCGTAGAAGAGACGGCACAATTTACACTTCGCCCCCTC 60
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      CAAATCTTCTCCTCCTCCTCCTCCTCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTA 120
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      GGGTTTCGGGCCGCCGCGGCGTCCTCCTCCTCCTCCTCCTCTTGTTCTGGTGGTCAGCGG 180
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      GGGCGCGCGTCCGATGTCGTCGGGGGCAGCGGCGTCGGCGGCGGGGGTGGAGGCGGGGGC 240
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      GGCGGGGGGCGGGAAGGACGACGAGCTGGCTGATCTGGTGCGGCGCCTAGTGGACGCCCT 300
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      CGCCCGCTACTCCGATCGCCTCCCGTTCGACCTCGATCGCCAGGGATTTGTGGTGGTCCG 360
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      TGGTGTAAAGGTGGCGCGCCTTGCTTGATTGTTTGTGGGGAAGGCTAGTCTTTTTTGTTT 420
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      GGAACTATATTTTATACTGTGGCCATTCTACTATTGTTTAGTTGTTATTACATACATATG 480
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      AGTTCGAAGCATCGATTTGGTAATTCGTTCTTAGCAGCTGTACAAGCTAGAAGCTGTAGT 540
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      AAATTTTTAGGCGTGGATTCGCAGTTCGCTAATGATATGTCTCCCCTTTGGGAAATGTGG 600
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      TCGTATTTGGGTCATTGTGATAGTTGAGATTTTGATGTATCCTTTAGGTTAGTAATAGGC 660
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      TAATAGTGCTGCGAGAAATAGTTACTATGTAGAAGTGTTGGTTGGCCAGAAAGATGCAAA 720
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      CTTTTATGATGGCTTGCTTTATGTGATATCATCGAATGATCTACTTACCTCTATAGTCAG 780
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      TTAATGAATCACTAAATAATTCGTTAATGGCATGTTGTCGTTTTGTAAGTTCTCTTGACT 840
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      GTAGTGTTTTACAACGCTATTTCCAAGAACTCGGTAGTAATACAACGTGCAGATCCTAGG 900
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      CTAGTAATGGATGCAAGCACAGGCATACACATGCGAACATGACATGTGCATGCACGGCGA 960
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      GGTAAACCGATTTCTATGCTCAGAAATCTGCGCTACAACGTCATTAAAACGACTTTAGGT 1020
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      ATCAAATCACGTGAAAGCACTTAAAAGTGCCGTAGCGCTCGAAAATCGACCTTCTGGGCC 1080
consensus_12490#1      ------------------------------------------------------------
                                                                                   

consensus_12490#2      ------------------------------------CGACATGTCGCAGCCCGCCCCCTC 24
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      CTATGTTGCAACTTGCAACAGCATGAGCATTCATATTATTCCACAAAAGATTGTACTTGG 1140
consensus_12490#1      --------------------------------CCTCCGACATGTCGCAGCCCGCCCCCTC 28
                                                                                   

consensus_12490#2      GTAGAAGAGACGGCACAATTTACACTTCGCCCCCTCCAAATCTTCTCCTCCTCCTCCTCC 84
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      TGTCAATTTTTAATCCCTTGTATCAGTCGTTGTTGTGGTTTGGATGAGTGAATTGGTGCC 1200
consensus_12490#1      GTAGAAGAGACGGCACAATTTACACTTCGCCCCCTCCAAATCTTCTCCTCCTCCTCCTCC 88
                                                                                   

consensus_12490#2      TCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTAGGGTTTCGGGCCGCTACTCCGATC 144
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      ATTTTTTGTGATTTCTCACACACAAAGTCCGTTTTATTAATTCTTGCTACAAGAATTATT 1260
consensus_12490#1      TCCTCCTCGCCGTCGCCGCCGCGAGCGGGCGCGCTAGGGTTTCGGGCCGCCGCGGCGTCC 148
                                                                                   

consensus_12490#2      GCCTCCCGTTCGACCTCGATCGCCAGAAACTTCGCTCATTTACTACACTTGCCGCAATTA 204
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      GAATTAC-TTCAATCTTCTATTTTAGAAACTTCGCTCATTTACTACACTTGCCGCAATTA 1319
consensus_12490#1      TCCTCCTCCTCCTCCTCTTGTTCTGGTGG--TCAGCGGGGGCGCGCGTCCGATGTCGTCG 206
                                                                                   

consensus_12490#2      CAATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGCAACCTCGGAGGC 264
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      CAATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGCAACCTCGGAGGC 1379
consensus_12490#1      GGGGCAGCGGCGTCGGCGGCGGGGGTGGAGGCGGGGGCGGCGGGGGGCGGGAAGGACGAC 266
                                                                                   

consensus_12490#2      CACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCACGGCCAGGTGCTT 324
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      CACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCACGGCCAGGTGCTT 1439
consensus_12490#1      GAGCTGGCTGATCTGGTGCGGCGCCTAGTGGACGCCCTCGCCCGCTACTCCGATCGCCTC 326
                                                                                   

consensus_12490#2      TGACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACC 384
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      TGACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGGAAGCAATCAACC 1499
consensus_12490#1      CCGTTCGACCTCGATCGCCAGGTTTGCCGCTCGGATCTGTGATCCCCCCCGTGTCGCGCG 386
                                                                                   

consensus_12490#2      AGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAG 444
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      AGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATAAACTGAGCGAAG 1559
consensus_12490#1      TGTGTTTTGCGGTGTTTTGATAATCTCTAGGTTTTCCTCGCTGTTTAGGGATTTGTGGTG 446
                                                                                   

consensus_12490#2      GACGAAGGGTTACATGCCGGTTACTTGGTGTGATTTT----GGAGGAAACAACTCCAGAG 500
consensus_12490#3      --------------------------------------------GGAACCAACTCCAGAG 16
consensus_12490#0      GACGAAGGGTTACATGCCGGTTACTTGGTGTGATTTT----GGAGGAAACAACTCCAGAG 1615
consensus_12490#1      GTCCGTGGTGTAAAGGTGGCGCGCCTTGCTTGATTGTTTGTGGGGAAGGCTAGTCTTTTT 506
                                                                   * *  * * **     

consensus_12490#2      GAGCTCCAGAACCATGTCACAGTGAGACC-TTCTGTCCTGGA--GGTTCTTCTAGAAATT 557
consensus_12490#3      GAGCTCCACACCCATGTCACAGTGAGACC-TTCTGTCCTGGA--GGTTCTTCTAGCAATT 73
consensus_12490#0      GAGCTCCAGAACCATGTCACAGTGAGACC-TTCTGTCCTGGA--GGTTCTTCTAGAAATT 1672
consensus_12490#1      TGTTTGGAACTATATTTTATACTGTGGCCATTCTACTATTGTTTAGTTGTTATTACATAC 566
                           *  *     ** * * * ** * ** ****    * *    *** ** *   *   

consensus_12490#2      GCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTGA-CGATGAAAGCGGAGAAAA 616
consensus_12490#3      GCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTCC-CGATGTAAGCGGAGAAAA 132
consensus_12490#0      GCAAAATTCTGTGATGTCTATCTGATGGAGCGCATTCTTGA-CGATGAAAGCGGAGAAAA 1731
consensus_12490#1      ATATGAGTTCGAAGCATCGATTTGGTAATTCGTTCTTAGCAGCTGTACAAGCTAGAAGCT 626
                         *  * *  *     ** ** ** *    **   *      *  *  ****    *   

consensus_12490#2      GGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACAGTGGATTGATAAAGGACAA 676
consensus_12490#3      GGTGTTATCTCCCCTGCGTGAAGCTGGACTTTTTACGACCAGTGGATTGATAAAGGACAA 192
consensus_12490#0      GGTGTTATCTGCCCTGAGTGAAGCTGGACTTTTTACGAACAGTGGATTGATAAAGGACAA 1791
consensus_12490#1      GTAGTAAATTTTTAGGCGTGGATTCGCAGTTCGCTAATGATATGTCTCCCTTTTGGGAAA 686
                       *  ** *  *     * *** *   * * **           **  *   *   **  **

consensus_12490#2      GGTTCTCTTCTGTAGTACAGAA-AATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTG 735
consensus_12490#3      GGTTCTCTTCTGTAGTCCAGAA-AATGGCCCCACCTCTTTTGTGCGGCAACTGGACCCTG 251
consensus_12490#0      GGTTCTCTTCTGTAGTACAGAA-AATGGCCGCACCTCTTTTGTGCGGCAACTGGAACCTG 1850
consensus_12490#1      TGTGGTCGTATTTGGGTCATTGTGATAGTTGAGAT--TTTGATGTATCCTTTAGGTTAGT 744
                        **  ** * * * *  **     ** *         ***  **   *   * *      

consensus_12490#2      ATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATC 795
consensus_12490#3      ATTGGCCCATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATC 311
consensus_12490#0      ATTGGCACATTGATACTAGTCCAGAAATTGTTCATCAGCTAGCTAGGTTTATCAAATATC 1910
consensus_12490#1      AATAGGCTAATAGTGCTG--CGAGAAATAGTT-ACTATGTAGAAGTGTTGGTTGGCCAGA 801
                       * * *   * *  * **   * ****** *** *  *  ***    ***  *     *  

consensus_12490#2      AAC-TACATATTTCTCC-ACAACGAGCAGAAAGAG-TAGCATCCAATGTTTT---CAGCT 849
consensus_12490#3      AAC-TACATATTTCTCC-CCAACGAGCAGAAAGAG-TAGCATCCAATGTTTT---CAGCT 365
consensus_12490#0      AAC-TACATATTTCTCC-ACAACGAGCAGAAAGAG-TAGCATCCAATGTTTT---CAGCT 1964
consensus_12490#1      AAGATGCAAACTTTTATGATGGCTTGCTTTATGTGATATCATCGAATGATCTACTTACCT 861
                       **  * ** * ** *       *  **   * * * ** **** **** * *    * **

consensus_12490#2      CTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAG-ATGATAATATGAGGTGAGC 908
consensus_12490#3      CTACAAGCTTGGACCAATTCTTTGGAGCCCTTGATCAGAG-ATGATCATATGAGGTGAGC 424
consensus_12490#0      CTACAAGCTTGGAACAATTCTTTGGAGGCCTTGATCAGAG-ATGATAATATGAGGTGAGC 2023
consensus_12490#1      CTATAGTCAGTTAATGAATCACTAAATAATTCGTTAATGGCATGTTGTCGTTTTGTAAGT 921
                       *** *  *    *   * **  *  *    * * * *  * *** *    *   ** ** 

consensus_12490#2      TCCAGCAAA------------CAATGGCATAGC-GAGAACTGAGACGAACATCATTGTTC 955
consensus_12490#3      TCCAGCAAC------------CAATGCCATAGC-GAGAACTGAGCCGACCCTCATTGTTC 471
consensus_12490#0      TCCAGCAAA------------CAATGGCATAGC-GAGAACTGAGACGAACATCATTGTTC 2070
consensus_12490#1      TCTCTTGACTGTAGTGTTTTACAACGCTATTTCCAAGAACTCGGTAGTAATACAACGTGC 981
                       **     *             *** *  **  *  ******  *  *     **  ** *

consensus_12490#2      ATTTTTTTTCCTTGAATGATGGAACTCGTTTTTCTTGTAC-CATGTGTAAAAGTCGTGT- 1013
consensus_12490#3      ATTCTTTTTCCTTCCATCATGGCACTCGTTTTTCTTGTAC-CATGTCTCCACGTCGTCC- 529
consensus_12490#0      ATTTTTTTTCCTTGAATGATGGAACTCGTTTTTCTTGTAC-CATGTGTAAAAGTCGTGTG 2129
consensus_12490#1      AGATCCTAGGCT--AGTAATGGATGCAAGCACAGGCATACACATGCGAACATGACATGTG 1039
                       *     *   **    * ****               *** ****     * * * *   

consensus_12490#2      -CATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGA--AAGAGATAGCATCTGTAG 1070
consensus_12490#3      -CGAATCCCTAGCGCTCCCGCTCCCCCCGTCGACGGCGAG--GAGGAGGAGGAGGAGGAG 586
consensus_12490#0      TCATGTTAAACTGGTTCTGCAACTCCCCATAAGCTATGGA--AAGAGATAGCATCTGTAG 2187
consensus_12490#1      -CATGCACGGCGAGGTAAACCGATTTCTATGCTCAGAAATCTGCGCTACAACGTCATTAA 1098
                        *           * *          *  *   *          *    *        * 

consensus_12490#2      CATAAT-------------CCATGTA-------TCAATTGTGTTCC-------------- 1096
consensus_12490#3      GAGAAGATTTGG-AGGGGGCGAAGTG-------TAAATTGTGCCGTCTCTTCTACGAGGG 638
consensus_12490#0      CATAAT-------------CCATGTA-------TCAATTGTGTTCCTGTATAACCGAAAT 2227
consensus_12490#1      AACGACTTTAGGTATCAAATCACGTGAAAGCACTTAAAAGTGCCGTAGCGCTCGAAAATC 1158
                        *  *                * **        * **  ***                  

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      GGCG-------------------------------------------------------- 642
consensus_12490#0      ACTTAAAATTGTCATCCAGTTATTTGTTCGGCCAAAAAAAACAAAAAAAAGA-------- 2279
consensus_12490#1      GACCTTCTGGGCCCTATGTTGCAACTTGCAACAGCATGAGCATTCATATTATTCCACAAA 1218
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      ------------------------------------------------------------
consensus_12490#1      AGATTGTACTTGGTGTCAATTTTTAATCCCTTGTATCAGTCGTTGTTGTGGTTTGGATGA 1278
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      ------------------------------------------------------------
consensus_12490#1      GTGAATTGGTGCCATTTTTTGTGATTTCTCACACACAAAGTCCGTTTTATTAATTCTTGC 1338
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      ------------------------------------------------------------
consensus_12490#1      TACAAGAATTATTGAATTACTTCAATCTTCTATTTTAGAAACTTCGCTCATTTACTACAC 1398
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      ------------------------------------------------------------
consensus_12490#1      TTGCCGCAATTACAATCACACTTATCTTTGCCTGGAAACTGTTGAGAGCTCCTCAAGAGC 1458
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      ------------------------------------------------------------
consensus_12490#1      AACCTCGGAGGCCACGTAGACGCGTTGCTCCATCACCTAGCAACACCAGCAGTAGATCAC 1518
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      ------------------------------------------------------------
consensus_12490#1      GGCCAGGTGCTTTGACCTCAACGGATGCTTGTTCATCTTCAGCAGATTCAAGAGCACAGG 1578
                                                                                   

consensus_12490#2      ------------------------------------------------------------
consensus_12490#3      ------------------------------------------------------------
consensus_12490#0      ------------------------------------------------------------
consensus_12490#1      AAGCAATCAACCAGCTTTTCCAGCCAGTAAACCTGACTCTTGAGCAGCTTGTTAGGCATA 1638
                                                                                   

consensus_12490#2      --------------------------------------------
consensus_12490#3      --------------------------------------------
consensus_12490#0      --------------------------------------------
consensus_12490#1      AACTGAGCGAAGGACGAAGGGTTACATGCCGGTTACTTGGTGTG 1682