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Oryza sativa
cluster # 12492 cluster # 12492       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12492#0 length = 2142 sequences # 6  
consensus_12492#1 length = 824 sequences # 4  

consensusID : consensus_12492#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2142
fasta sequence
                              [TCGCGGTCTCCCTCCCTCCCTCCCTCACGTCACGTCACACGCGTCGCGTCGCTCGCTTGCCTTCGCCCTCGTGTCGAGCACTCTCTCCCTCTTTCCATTCCGGCTCCAACCAACCAACCACCCCCCCCCCCCCCCACCACGGCGAGAGCCGCCGTACAGCCAGCAAGCTGCCGCGCGGCGCGAGGTCGCCGAGGCTCGGGGGCCGGCGGGCGGATGGCGTCGTCGAGGGTGATGGCGGCGGCGGCGGCGTCGTCGTCGTCGTCGCCCCCGCCCCCGCCCCCGGCGGCGGCCGCGGCCGGCGGGGCCGCCGATCTCGCGCGGTTCAGGAGCACCAGCAGCGGCATCGGATCCATGAACATGGACGACATCCTCCGCAACATATACGGCGAGGCCGCGCCGCCGCCTGGGGCCGCCGGCTCGGCCCCGGCCCCGCCCCCGGCGGGGGAGGCGGCGGGGGCCCCCGTGGCGGAGGTCGCCGCGCGGCGGACGGCGGAGGAGGTGTGGAAGGAGATCTCGTCCTCGGGAGGGCTATCTGCTCCCGCTCCAGCTCCCGCGGCCGGCGCTGCGGGTAGGGGTGGCGGGCCTGAGATGACGCTGGAGGATTTCCTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTGGGGTTCCCTAATGTAAGGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGCGGCGGGAGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGGCAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGTGAGAGGAAACAGGCGTATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTAAGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGGTAAGTTTGATTGTCTAACATAATTGCTTCTGTATCTTTTTTACTTTGAAACTTGATTTAACATCTGTATGGTACAGTATCATAATATGTCCTTAAAAGTTTCATTCTGCTTGAGAGCTGAGACATTTAATTGAGTTGCATATATGTTTCCATGTTTAAAGTCGTAGTGTGGTTTATTGGACATTTAATACAATCTTTTGGAAAGCGTATTGCAGAACTTTTAAGCTTTTTAAAATGAAGGCAGTCGTTATGTCAAATTACATGCTTCCTTGGCCATTTTGATCTGGTTTTTCTTACAGGAGCTAACAAGCTTAATGTCTCCATCGGTGTTTGGTGAACTAAATAATTAATGCACTGATTAATCAAGTTTATCTGCACACTATGTCAGCTTGCTTGGGATTCTTTATTTCATGTTTGGTAATACATGATTCAAATAGTTTTTTGTTATTTAGAAGTGGTCCGTCCAGCAATCCTGACAACTATT-TCTCACGACAACACTGCTTGTCAAGTTGATCCACCCAGGTATAGTACAATAAGTTATCATTTTGTCCCTACCATT-G-GGGGTGGATGGCGCTTGCTGCATGCATATGACATAATGAAAATGGTATCACATCTTCTATATAACAATGTTTGCAGCCCAAATCTAGTACATTGAGGTGTTCATATAGCAAATGTATACACGATAAAAGTCCATATTTTCTCCCAATCTAATTTCTGTGTTGTTTTTAAATTTATTTTGCTAAATTTGTTGTTTGTTATTTGCTGCATAAGTATGTAGTAAGCAAAACATGCCATTTTTTTTACTTTATTTCTCAGAAATGGCACGTGTTTATGCAGATCAAGGAACAAGCCGTTGCAGTTGTCATAAGAAAAAAAACACAAGATCTACGAAGAACCAACTCAATGGAATGGTAGAAGTAACCCAATTTCTGTTGTTACTCTCTTACAGCTACAGAGATTCTCCCGTTTTCTGTTTCCCCTAGCTGATGTTTCAGGCGACTTGGTAGAATAGTCAAGGCTTTCAGGTGACATGAAATCTCAAATGCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGCCATTCAGAATTGGTCTGCGATCTGTTATTTATTTGTCATCAGGCTCATGCGGCTAACTGTGTGTACAAACAAGAATAAGCCGGTTTACATGAAAGGTAGATTAATGTTAAAAAAAANA]

[+] EMBL AK120656             [TCGCGGTCTCCCTCCCTCCCTCCCTCACGTCACGTCACACGCGTCGCGTCGCTCGCTTGCCTTCGCCCTCGTGTCGAGCACTCTCTCCCTCTTTCCATTCCGGCTCCAACCAACCAACCACCCCCCCCCCCCCCCACCACGGCGAGAGCCGCCGTACAGCCAGCAAGCTGCCGCGCGGCGCGAGGTCGCCGAGGCTCGGGGGCCGGCGGGCGGATGGCGTCGTCGAGGGTGATGGCGGCGGCGGCGGCGTCGTCGTCGTCGTCGCCCCCGCCCCCGCCCCCGGCGGCGGCCGCGGCCGGCGGGGCCGCCGATCTCGCGCGGTTCAGGAGCACCAGCAGCGGCATCGGATCCATGAACATGGACGACATCCTCCGCAACATATACGGCGAGGCCGCGCCGCCGCCTGGGGCCGCCGGCTCGGCCCCGGCCCCGCCCCCGGCGGGGGAGGCGGCGGGGGCCCCCGTGGCGGAGGTCGCCGCGCGGCGGACGGCGGAGGAGGTGTGGAAGGAGATCTCGTCCTCGGGAGGGCTATCTGCTCCCGCTCCAGCTCCCGCGGCCGGCGCTGCGGGTAGGGGTGGCGGGCCTGAGATGACGCTGGAGGATTTCCTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTGGGGTTCCCTAATGTAAGGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGCGGCGGGAGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGGCAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGGGAGAGGAAACAGGCGTATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTAAGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGGTAAGTTTGATTGTCTAACATAATTGCTTCTGTATCTTTTTTACTTTGAAACTTGATTTAACATCTGTATGGTACAGTATCATAATATGTCCTTAAAAGTTTCATTCTGCTTGAGAGCTGAGACATTTAATTGAGTTGCATATATGTTTCCATGTTTAAAGTCGTAGTGTGGTTTATTGGACATTTAATACAATCTTTTGGAAAGCGTATTGCAGAACTTTTAAGCTTTTTAAAATGAAGGCAGTCGTTATGTCAAATTACATGCTTCCTTGGCCATTTTGATCTGGTTTTTCTTACAGGAGCTAACAAGCTTAATGTCTCCATCGGTGTTTGGTGAACTAAATAATTAATGCACTGATTAATCAAGTTTATCTGCACACTATGTCAGCTTGCTTGGGATTCTTTATTTCATGTTTGGTAATACATGATTCAAATAGTTTTTTGTTATTTAGAAGTGGTCCGTCCAGCAATCCTGACAACTATT TCTCACGACAACACTGCTTGTCAAGTTGATCCACCCAGGTATAGTACAATAAGTTATCATTTTGTCCCTACCATT G GGGGTGGATGGCGCTTGCTGCATGCATATGACATAATGAAAATGGTATCACATCTTCTATATAACAATGTTTGCAGCCCAAATCTAGTACATTGAGGTGTTCATATAGCAAATGTATACACGATAAAAGTCCATATTTTCTCCCAATCTAATTTCTGTGTTGTTTTTAAATTTATTTTGCTAAATTTGTTGTTTGTTATTTGCTGCATAAGTATGTAGTAAGCAAAACATGCCATTTTTTTTACTTTATTTCTCAGAAATGGCACGTGTTTATGCAGATCAAGGAACAAGCCGTTGCAGTTGTCATAAGAAAAAAAACACAAGATCTACGAAGAACCAACTCAATGGAATGGTAGAAGTAACCCAATTTCTGTTGTTACTCTCTTACAGCTACAGAGATTCTCCCGTTTTCTGTTTCCCCTAGCTGATGTTTCAGGCGACTTGGTAGAATAGTCAAGGCTTTCAGGTGACATGAAATCTCAAATGCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGCCATTCAGAATTGGTCTGCGATCTGTTATTTATTTGTCATCAGGCTCATGCGGCTAACTGTGTGTACAAACAAGAATAAGCCGGTTTACATGAAAGGTAGATTAATGT           ]
[+] EMBL CB667817             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGGCAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGTGAGAGGAAACAGGCGTATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTAAGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGGTAAGTTTGATTGTCTAACATAATTGCTTCTGTATCTTTTTTACTTTGAAACTTGATTTAACATCTGTATGGTACAGTATCATAATATGTCCTTAAAAGTTTCATTCTGCTTGAGAGCTGAGACATTTAATTGAGTTGCATATATGTTTCCATGTTTAAAGTCGTAGTGTGGTTTATTGGACATTTAATACAATCTTTTGGAAAGCGTATTGCAGAACTTTTAAGCTTTTTAAAATGAAGGCAGTCGTTATGTCAAATTACATGCTTCCTTGGCCATTTTGATCTGGTTTTTCTTACAGGAGCTAACAAGCTTAATGTCTCCATCGGTGTTTGGTGAACTAAATAATTAATGCACTGATTAATCAAGTTTATCTGCACACTATGTCAGCTTGCTTGGGATTCTTTATTTCATGTTTGGTAATACATGATTCAAATAGTTTTTTGTTATTTAGAAGTGGTCCGTCCAGCAATCCTGACAACTATT TCTCACGACAACACTGCTTGTCAAGTTGATCCACCCAGGTATAGTACAATAAGTTATCATTTTGTCCCTACCATT GNGGGGTGGATGGCGCTTGCTGCATGCATATGACATAATGAAAATGGTATCACATCTTCTATATAACAATGTTTGCAGCCCAAATCTAGTACATTGAGGTGTTCATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB667770             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGGCAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGTGAGAGGAAACAGGCGTATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTAAGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGGTAAGTTTGATTGTCTAACATAATTGCTTCTGTATCTTTTTTACTTTGAAACTTGATTTAACATCTGTATGGTACAGTATCATAATATGTCCTTAAAAGTTTCATTCTGCTTGAGAGCTGAGACATTTAATTGAGTTGCATATATGTTTCCATGTTTAAAGTCGTAGTGTGGTTTATTGGACATTTAATACAATCTTTTGGAAAGCGTATTGCAGAACTTTTAAGCTTTTTAAAATGAAGGCAGTCGTTATGTCAAATTACATGCTTCCTTGGCCATTTTGATCTGGTTTTTCTTACAGGAGCTAACAAGCTTAATGTCTCCATCGGTGTTTGGTGAACTAAATAATTAATGCACTGATTAATCAAGTTTATCTGCACACTATGTCAGCTTGCTTGGGATTCTTTATTTCATGTTTGGTAATACATGATTCAAATAGTTTTTTGTTATTTAGAAGTGGTCCGTCCAGCAATCCTGACAACTATT TCTCACGACAACACTGCTTGTCAAGTTGATCCACCCAGGTATAGTACAATAAGTTATCATTTTGTCCCTACCATTGG GGGGTGGATGGCGCTTGCTGCATGCATATGACATAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OS06242A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAGAACTTTTAAGCTTTTTAAAATGAAGGCAGTCGTTATGTCAAATTACATGCTTCCTTGGCCATTTTGATCTGGTTTTTCTTACAGGAGCTAACAAGCTTAATGTCTCCATCGGTGTTTGGTGAACTAAATAATTAATGCACTGATTAATCAAGTTTATCTGCACACTATGTCAGCTTGCTTGGGATTCTTTATTTCATGTTTGGTAATACATGATTCAAATAGTTTTTTGTTATTTAGAAGTGGTCCGTCCAGCAATCCTGACAACTATTGTCTCACGGCAACACTGCTTGTCAAGTTGATCCACCCAGGga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AA750618             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATGATTCAAATAGTTTTTTGTTATTTAGAAGTGGTCCGTCCAGCAATCCTGACAACTATT TCTCACGACAACACTGCTTGTCAAGTTGATCCACCCAGGTATAGTACAATAAGTTATCATTTTGTCCCTACCATT G GGGGTGGATGGCGCTTGCTGCATGCATATGACATAATGGAAATGGTATCACATCTTCTGTATAACAATGTTTGCAGCCCAAATCTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C98091               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cCTCCCGTTTTCTGTTTCCCNTANCTGATGTTTCAGGCGNCTTGGTNGANTNGTCAAGGCTTTCAGGTGACATGAAATCTCAAATGCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGCCATTCAGAATTGGTCTGCGATCTGTTATTTATTTGTCATCAGGCTCATGCGGCTAACTGTGTGTACAAACAAGAATAAGCCGGTTTACATGAAAGGTNGNTTNATGTTAAAAAAAANA]


>consensus_12492#0 TCGCGGTCTCCCTCCCTCCCTCCCTCACGTCACGTCACACGCGTCGCGTCGCTCGCTTGC CTTCGCCCTCGTGTCGAGCACTCTCTCCCTCTTTCCATTCCGGCTCCAACCAACCAACCA CCCCCCCCCCCCCCCACCACGGCGAGAGCCGCCGTACAGCCAGCAAGCTGCCGCGCGGCG CGAGGTCGCCGAGGCTCGGGGGCCGGCGGGCGGATGGCGTCGTCGAGGGTGATGGCGGCG GCGGCGGCGTCGTCGTCGTCGTCGCCCCCGCCCCCGCCCCCGGCGGCGGCCGCGGCCGGC GGGGCCGCCGATCTCGCGCGGTTCAGGAGCACCAGCAGCGGCATCGGATCCATGAACATG GACGACATCCTCCGCAACATATACGGCGAGGCCGCGCCGCCGCCTGGGGCCGCCGGCTCG GCCCCGGCCCCGCCCCCGGCGGGGGAGGCGGCGGGGGCCCCCGTGGCGGAGGTCGCCGCG CGGCGGACGGCGGAGGAGGTGTGGAAGGAGATCTCGTCCTCGGGAGGGCTATCTGCTCCC GCTCCAGCTCCCGCGGCCGGCGCTGCGGGTAGGGGTGGCGGGCCTGAGATGACGCTGGAG GATTTCCTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTG GGGTTCCCTAATGTAAGGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGC GGCGGGAGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGG CAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGTGAGAGGAAACAGGCG TATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTA AGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGGTAAGTTTGATTGTCTAACAT AATTGCTTCTGTATCTTTTTTACTTTGAAACTTGATTTAACATCTGTATGGTACAGTATC ATAATATGTCCTTAAAAGTTTCATTCTGCTTGAGAGCTGAGACATTTAATTGAGTTGCAT ATATGTTTCCATGTTTAAAGTCGTAGTGTGGTTTATTGGACATTTAATACAATCTTTTGG AAAGCGTATTGCAGAACTTTTAAGCTTTTTAAAATGAAGGCAGTCGTTATGTCAAATTAC ATGCTTCCTTGGCCATTTTGATCTGGTTTTTCTTACAGGAGCTAACAAGCTTAATGTCTC CATCGGTGTTTGGTGAACTAAATAATTAATGCACTGATTAATCAAGTTTATCTGCACACT ATGTCAGCTTGCTTGGGATTCTTTATTTCATGTTTGGTAATACATGATTCAAATAGTTTT TTGTTATTTAGAAGTGGTCCGTCCAGCAATCCTGACAACTATTTCTCACGACAACACTGC TTGTCAAGTTGATCCACCCAGGTATAGTACAATAAGTTATCATTTTGTCCCTACCATTGG GGGTGGATGGCGCTTGCTGCATGCATATGACATAATGAAAATGGTATCACATCTTCTATA TAACAATGTTTGCAGCCCAAATCTAGTACATTGAGGTGTTCATATAGCAAATGTATACAC GATAAAAGTCCATATTTTCTCCCAATCTAATTTCTGTGTTGTTTTTAAATTTATTTTGCT AAATTTGTTGTTTGTTATTTGCTGCATAAGTATGTAGTAAGCAAAACATGCCATTTTTTT TACTTTATTTCTCAGAAATGGCACGTGTTTATGCAGATCAAGGAACAAGCCGTTGCAGTT GTCATAAGAAAAAAAACACAAGATCTACGAAGAACCAACTCAATGGAATGGTAGAAGTAA CCCAATTTCTGTTGTTACTCTCTTACAGCTACAGAGATTCTCCCGTTTTCTGTTTCCCCT AGCTGATGTTTCAGGCGACTTGGTAGAATAGTCAAGGCTTTCAGGTGACATGAAATCTCA AATGCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGCCATTCAGAATTGGTCT GCGATCTGTTATTTATTTGTCATCAGGCTCATGCGGCTAACTGTGTGTACAAACAAGAAT AAGCCGGTTTACATGAAAGGTAGATTAATGTTAAAAAAAANA



consensusID : consensus_12492#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 824
fasta sequence
                              [ACGGCGGAGGAGGTGTGGAAGGAGATCTCGTCCTCGGGAGGGCTATCTGCTCCCGCTCCAGCTCCCGCGGCCGGCGCTGCGGGTAGGGGTGGCGGGCCTGAGATGACGCTGGAGGATTTCCTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTGGGGTTCCCTAATGTAACGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGCGGCGGGAGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGGCAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGGGAGAGGAAACAGGCGTATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTAAGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGATCAAGGAACAAGCCGTTGCAGTTGTCATAAGGAAAAAAACACAAGATCTACGAAGAACCAACTCAATGGAATGGTAGAAGTAACCCAATTTCTGTTGTTACTCTCTTACAGCTACAGAGATTCTCCCGTTTTCTGTTTCCCCTAGCTGATGTTTCAGGCGACTTGGTAGAATAGTCAAGGCTTTCAGGTGACATGAAATCTCAAATGCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGCCATTCAGAATTGGTCTGCGATCTGTTATTTATTTGTCATCAGGCTCATGCGGCTAACTGTGTGTACAAACAAGAATAAGCCGGTTTACATGAAAGGTAGATTAATGTTAAAAAAAAAAAAAAA]

[+] EMBL AY224507             [ACGGCGGAGGAGGTGTGGAAGGAGATCTCGTCCTCGGGAGGGCTATCTGCTCCCGCTCCAGCTCCCGCGGCCGGCGCTGCGGGTAGGGGTGGCGGGCCTGAGATGACGCTGGAGGATTTCCTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTGGGGTTCCCTAATGTAACGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGCGGCGGGAGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGGCAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGGGAGAGGAAACAGGCGTATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTAAGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGATCAAGGAACAAGCCGTTGCAGTTGTCATAAGGAAAAAAACACAAGATCTACGAAGAACCAACTCAAT                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BP184423             [                      AGATCTCGTCCTCGGGAGGGCTATCTGCTCCCGCTCCAGCTCCCGCGGCCGGCGCTGCGGGTAGGGGTGGCGGGCCTGAGATGACGCTGGAGGATTTCCTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTGGGGTTCCCTAATGTAACGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGCGGCGGGAGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGTGCAGCGATGCATCGGCAGAAGCGAATGATCAAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB668271             [                                                                                                    agacctttCTGGAGGATTTCCTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTGGGGTTCCCTAATGTAACGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGCGGCGGGAGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGGCAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGGGAGAGGAAACAGGCGTATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTAAGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGATCAAGGAACAAGCCGTTGCAGTTGTCATAAGGAAAAAAACACAAGATCTACGAAGAACCAACTCAATGGAATGGTAGAAGTAACCCAATTTCTGTTGTTACTCTCTTACAGCTACAGAGATTCTCCCGTTTTCTGTTTCCCCTAGCTGATGTTTCAGGCGACTTGGTAGAATAGTCAAGGCTTTCAGGTGACATGAAATCTCAAATGCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGCCATTCAGAATTGGTCTGCGATCTGTTATTTATTTGTCATCAGGCTCATGCGGCTAACTGTGTGTACAAACAAGAATAAGCCGGTTTACATGAAAGGTAGA                       ]
[+] EMBL BP184424             [                                                                                                                                                                                                                                                                                                               ATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGGGAGAGGAAACAGGCGTATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTAAGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGATCAAGGAACAAGCCGTTGCAGTTGTCATAAGGAAAAAAACACAAGATTTACGAAGAACCAACTCAATGGAATGGTAGAAGTAACCCAATTTCTGTTGTTACTCTCTTACAGCTACAGAGATTCTCCCGTTTTCTGTTTCCCCTAGCTGATGTTTCAGGCGACTTGGTAGAATAGTCAAGGCTTTCAGGTGACATGAAATCTCAAATGCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGCCATTCAGAATTGGTCTGCGATCTGTTATTTATTTGTCATCAGGCTCATGCGGCTAACTGTGTGTACAAACAAGAATAAGCCGGTTTACATGAAAGGTAGATTAATGTTAAAAAAAAAAAAAAA]


>consensus_12492#1 ACGGCGGAGGAGGTGTGGAAGGAGATCTCGTCCTCGGGAGGGCTATCTGCTCCCGCTCCA GCTCCCGCGGCCGGCGCTGCGGGTAGGGGTGGCGGGCCTGAGATGACGCTGGAGGATTTC CTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTGGGGTTC CCTAATGTAACGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGCGGCGGG AGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGGCAGAAG CGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGGGAGAGGAAACAGGCGTATATC GCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTAAGAGAA CAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGATCAAGGAACAAGCCGTTGCAGTTGTC ATAAGGAAAAAAACACAAGATCTACGAAGAACCAACTCAATGGAATGGTAGAAGTAACCC AATTTCTGTTGTTACTCTCTTACAGCTACAGAGATTCTCCCGTTTTCTGTTTCCCCTAGC TGATGTTTCAGGCGACTTGGTAGAATAGTCAAGGCTTTCAGGTGACATGAAATCTCAAAT GCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGCCATTCAGAATTGGTCTGCG ATCTGTTATTTATTTGTCATCAGGCTCATGCGGCTAACTGTGTGTACAAACAAGAATAAG CCGGTTTACATGAAAGGTAGATTAATGTTAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12492#0      TCGCGGTCTCCCTCCCTCCCTCCCTCACGTCACGTCACACGCGTCGCGTCGCTCGCTTGC 60
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      CTTCGCCCTCGTGTCGAGCACTCTCTCCCTCTTTCCATTCCGGCTCCAACCAACCAACCA 120
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      CCCCCCCCCCCCCCCACCACGGCGAGAGCCGCCGTACAGCCAGCAAGCTGCCGCGCGGCG 180
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      CGAGGTCGCCGAGGCTCGGGGGCCGGCGGGCGGATGGCGTCGTCGAGGGTGATGGCGGCG 240
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      GCGGCGGCGTCGTCGTCGTCGTCGCCCCCGCCCCCGCCCCCGGCGGCGGCCGCGGCCGGC 300
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      GGGGCCGCCGATCTCGCGCGGTTCAGGAGCACCAGCAGCGGCATCGGATCCATGAACATG 360
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      GACGACATCCTCCGCAACATATACGGCGAGGCCGCGCCGCCGCCTGGGGCCGCCGGCTCG 420
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      GCCCCGGCCCCGCCCCCGGCGGGGGAGGCGGCGGGGGCCCCCGTGGCGGAGGTCGCCGCG 480
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      CGGCGGACGGCGGAGGAGGTGTGGAAGGAGATCTCGTCCTCGGGAGGGCTATCTGCTCCC 540
consensus_12492#1      ------ACGGCGGAGGAGGTGTGGAAGGAGATCTCGTCCTCGGGAGGGCTATCTGCTCCC 54
                             ******************************************************

consensus_12492#0      GCTCCAGCTCCCGCGGCCGGCGCTGCGGGTAGGGGTGGCGGGCCTGAGATGACGCTGGAG 600
consensus_12492#1      GCTCCAGCTCCCGCGGCCGGCGCTGCGGGTAGGGGTGGCGGGCCTGAGATGACGCTGGAG 114
                       ************************************************************

consensus_12492#0      GATTTCCTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTG 660
consensus_12492#1      GATTTCCTGGCTAGGGAGGATGACCCTAGGGCAACGGCCGTGGAGGGGAATATGGTTGTG 174
                       ************************************************************

consensus_12492#0      GGGTTCCCTAATGTAAGGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGC 720
consensus_12492#1      GGGTTCCCTAATGTAACGGAGGGTGTGGGTACAGCAGGAGGAGGAAGAGGCGGCGGCGGC 234
                       **************** *******************************************

consensus_12492#0      GGCGGGAGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGG 780
consensus_12492#1      GGCGGGAGGGGGAGGAAGCGGACGCTGATGGATCCAGCTGACCGCGCAGCGATGCAGCGG 294
                       ************************************************************

consensus_12492#0      CAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGTGAGAGGAAACAGGCG 840
consensus_12492#1      CAGAAGCGAATGATCAAGAACCGCGAATCTGCGGCGAGGTCCAGGGAGAGGAAACAGGCG 354
                       ******************************************** ***************

consensus_12492#0      TATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTA 900
consensus_12492#1      TATATCGCAGAGCTGGAGGCTCAGGTCGCGGAGCTTGAGGAAGAACATGCACAGCTGTTA 414
                       ************************************************************

consensus_12492#0      AGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGGTAAGTTTGATTGTCTAACAT 960
consensus_12492#1      AGAGAACAGGAGGAGAAAAATCAAAAGAGGCTTAAGGAGATCAAGG-AACAAGCCGTTGC 473
                       *************************************** * *     *    *      

consensus_12492#0      AATTGCTTCTGTATCTTTTTTACTTTGAAACTTGATTTAACATCTGTATGGTACAGTATC 1020
consensus_12492#1      AGTTGTCATAAGGAAAAAAACACAA-GATCTACGAAGAACCAACTCAATGGAATGGTAGA 532
                       * ***                **   **     **   * ** **  **** *  ***  

consensus_12492#0      A-TAATATGTCCTTAAAAGTTTCATTCTGCTTGAGAGCTGAGACATTTAATTGAGTTGCA 1079
consensus_12492#1      AGTAACCCAATTTCTGTTGTT--ACTCT-CTTACAGCTACAGAGATTCTCCCGTTTTCTG 589
                       * ***       *     ***  * *** ***        *** ***     *  **   

consensus_12492#0      TATATGTTTCCATGTTTAAAGTCGTAGTGTGGTTTATTGGACATTTAATACAATCTTTTG 1139
consensus_12492#1      T-----TTCCCCTAGCTGATGTTTCAGGCGACTTGGTAGAATAGTCAAGGCTTTCAGGTG 644
                       *     ** ** *   * * **   **     **  * * * * * **  *  **   **

consensus_12492#0      GAAAGCGTATTGCAGAACTTTTAAGCTTTTTAAAATGAAGGCAGTCGTTATGTCAAATTA 1199
consensus_12492#1      ACATG-AAATCTCAAATGCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGC-- 701
                         * *   **  ** *     * **    *  *  **   *   **   ******     

consensus_12492#0      CATGCTTCCTTGGCCATTTTGATCTGGTTTTTCTTACAGGAGCTAACAAGCTTAATGTCT 1259
consensus_12492#1      CATTCAGAATTGGTC--TGCGATCTGTTATTTATTT-----GTCATCAGGCTCA-TGCGG 753
                       *** *    **** *  *  ****** * *** **      *  * ** *** * **   

consensus_12492#0      CCATCGGTGTTTGGTGAACTAAATAA-TTAATGCACTGATTAATCAAGTTTATCTGCACA 1318
consensus_12492#1      CTAACTGTGTGTACAAACAAGAATAAGCCGGTTTACATGAAAGGTAGATTAATGTTAAAA 813
                       * * * **** *    *    *****     *  **     *   *  ** ** *  * *

consensus_12492#0      CTATGTCAGCTTGCTTGGGATTCTTTATTTCATGTTTGGTAATACATGATTCAAATAGTT 1378
consensus_12492#1      AAAAAAAAAAA------------------------------------------------- 824
                         *    *                                                    

consensus_12492#0      TTTTGTTATTTAGAAGTGGTCCGTCCAGCAATCCTGACAACTATTTCTCACGACAACACT 1438
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      GCTTGTCAAGTTGATCCACCCAGGTATAGTACAATAAGTTATCATTTTGTCCCTACCATT 1498
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      GGGGGTGGATGGCGCTTGCTGCATGCATATGACATAATGAAAATGGTATCACATCTTCTA 1558
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      TATAACAATGTTTGCAGCCCAAATCTAGTACATTGAGGTGTTCATATAGCAAATGTATAC 1618
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      ACGATAAAAGTCCATATTTTCTCCCAATCTAATTTCTGTGTTGTTTTTAAATTTATTTTG 1678
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      CTAAATTTGTTGTTTGTTATTTGCTGCATAAGTATGTAGTAAGCAAAACATGCCATTTTT 1738
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      TTTACTTTATTTCTCAGAAATGGCACGTGTTTATGCAGATCAAGGAACAAGCCGTTGCAG 1798
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      TTGTCATAAGAAAAAAAACACAAGATCTACGAAGAACCAACTCAATGGAATGGTAGAAGT 1858
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      AACCCAATTTCTGTTGTTACTCTCTTACAGCTACAGAGATTCTCCCGTTTTCTGTTTCCC 1918
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      CTAGCTGATGTTTCAGGCGACTTGGTAGAATAGTCAAGGCTTTCAGGTGACATGAAATCT 1978
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      CAAATGCCATCAGAAGGTGTAGCTGTGCGTGATCAAAATGTCACGCCATTCAGAATTGGT 2038
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      CTGCGATCTGTTATTTATTTGTCATCAGGCTCATGCGGCTAACTGTGTGTACAAACAAGA 2098
consensus_12492#1      ------------------------------------------------------------
                                                                                   

consensus_12492#0      ATAAGCCGGTTTACATGAAAGGTAGATTAATGTTAAAAAAAANA 2142
consensus_12492#1      --------------------------------------------
                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)