cluster # 12500

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Oryza sativa
cluster # 12500 cluster # 12500 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12500#0 length = 1763 sequences # 3

consensus_12500#1 length = 1549 sequences # 6
consensus_12500#2 length = 695 sequences # 1

consensusID : consensus_12500#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1763
fasta sequence

                              [TGGAACGGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCGTCGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAACGAAAAAAACAACAGAGAAAAACTCCTCCCTCCTCCTCCCCCTCTGAAGCCATGGCTGCCTTCCCCCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATGGCTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCCATCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGGTTTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCGTCGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTGGCGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGGCGGGAGGCCTGGGCGATGCCCGCCGCCGCCGCCGTCGAGATGGTGCACACCATGTCGCTCGTCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAGCCCACCTGCCACGTCGTCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTCTCCCTCTCCTTCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCGCCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCGATAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGCTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTCTGATGCAAGGGAACAACTTTCAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATCGGCAGAACTGAGGTTCGTTTTACAATGAGTGTCAATGTAAGCTTTGATTCAGGGATGAGCTTGTCTTGGAAATTGTTCTGTTGAACATGTGTTTCAGTGATGTTCTTCTGTTTACAGCAATTGGGATCAATGTTTCTCTAACAGCTATATATATGTATATTCTTGGTTCCAAGCATGCAGAAAACTTCAATCAGAGAAAGTGTTTAGTTACAGTGCCGTAGTAAATAAATCGGTTATAATTGATTCCTGTCTATAGGTGTGCATTCAGTCTTTTGGTCAATTCGCTTTGTAGCAAAATTCAGTTAGTCAAAACTCAGGAATGAATTGTTATTGGGAAAAGGCAAGACCGAAATTCGGTTAATCCTGTCTATTGCTCAAAAACCTATACAAGCCTTTCATAGTGAATGTAGCCCCTGCATAAGGTTTCCTGTACAGGTACAGTAGGACCTTGACTAAATGTTTTTCATTGGAATAATGGAATGGTTATAAGCTGCACCTTTCTT]

[+] EMBL CF335517             [TGGAACGGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCGTCGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAACGAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF335516             [ GGAACGGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCGTCGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAACGAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK121529             [    ACGGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCATCGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAACGAAAAAAACAACAGAGAAAAACTCCTCCCTCCTCCTCCCCCTCTGAAGCCATGGCTGCCTTCCCCCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATGGCTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCCATCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGGTTTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCGTCGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTGGCGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGGCGGGAGGCCTGGGCGATGCCCGCCGCCGCCGCCGTCGAGATGGTGCACACCATGTCGCTCGTCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAGCCCACCTGCCACGTCGTCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTCTCCCTCTCCTTCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCGCCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCGATAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGCTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTCTGATGCAAGGGAACAACTTTCAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATCGGCAGAACTGAGGTTCGTTTTACAATGAGTGTCAATGTAAGCTTTGATTCAGGGATGAGCTTGTCTTGGAAATTGTTCTGTTGAACATGTGTTTCAGTGATGTTCTTCTGTTTACAGCAATTGGGATCAATGTTTCTCTAACAGCTATATATATGTATATTCTTGGTTCCAAGCATGCAGAAAACTTCAATCAGAGAAAGTGTTTAGTTACAGTGCCGTAGTAAATAAATCGGTTATAATTGATTCCTGTCTATAGGTGTGCATTCAGTCTTTTGGTCAATTCGCTTTGTAGCAAAATTCAGTTAGTCAAAACTCAGGAATGAATTGTTATTGGGAAAAGGCAAGACCGAAATTCGGTTAATCCTGTCTATTGCTCAAAAACCTATACAAGCCTTTCATAGTGAATGTAGCCCCTGCATAAGGTTTCCTGTACAGGTACAGTAGGACCTTGACTAAATGTTTTTCATTGGAATAATGGAATGGTTATAAGCTGCACCTTTCTT]




>consensus_12500#0
TGGAACGGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCGT
CGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAAC
GAAAAAAACAACAGAGAAAAACTCCTCCCTCCTCCTCCCCCTCTGAAGCCATGGCTGCCT
TCCCCCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATGG
CTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCCA
TCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGGT
TTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCGT
CGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTGG
CGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGGC
GGGAGGCCTGGGCGATGCCCGCCGCCGCCGCCGTCGAGATGGTGCACACCATGTCGCTCG
TCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAGCCCACCTGCC
ACGTCGTCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTCTCCCTCTCCT
TCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCG
CCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCG
CCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTC
TTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGG
CAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCGA
TAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGC
TCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTG
GGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTCTGATGCAAGGGAACAACTTT
CAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATC
GGCAGAACTGAGGTTCGTTTTACAATGAGTGTCAATGTAAGCTTTGATTCAGGGATGAGC
TTGTCTTGGAAATTGTTCTGTTGAACATGTGTTTCAGTGATGTTCTTCTGTTTACAGCAA
TTGGGATCAATGTTTCTCTAACAGCTATATATATGTATATTCTTGGTTCCAAGCATGCAG
AAAACTTCAATCAGAGAAAGTGTTTAGTTACAGTGCCGTAGTAAATAAATCGGTTATAAT
TGATTCCTGTCTATAGGTGTGCATTCAGTCTTTTGGTCAATTCGCTTTGTAGCAAAATTC
AGTTAGTCAAAACTCAGGAATGAATTGTTATTGGGAAAAGGCAAGACCGAAATTCGGTTA
ATCCTGTCTATTGCTCAAAAACCTATACAAGCCTTTCATAGTGAATGTAGCCCCTGCATA
AGGTTTCCTGTACAGGTACAGTAGGACCTTGACTAAATGTTTTTCATTGGAATAATGGAA
TGGTTATAAGCTGCACCTTTCTT

consensusID : consensus_12500#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1549
fasta sequence

                              [GGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCGTCGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAACGAAAAAAACAACAGAGAAAAACTCCTCCCTCCTCCTCCCCCTCTGAAGCCATGGCTGCCTTCCCCCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATGGCTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCCATCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGGTTTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCGTCGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTGGCGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGGCGGGAGGCCTGGGCGATGCCCGCCGCCGCTGCCGTCGAGATGGTGCACACCATGTCGCTCGTCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAGCCCACCTGCCACGTCGTCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTCTCCCTCTCCTTCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCGCCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCGATAGGA-TTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGCTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGGAGAAATCA-CGGGAGTTTGCAGAAAAGTTGCTTTCTGATG-CAAGGGAACA-ACTTTCA-GGATTTGATCA-AGA-GACCGCAGCA-CCA-CTTCTGCA-CCTGGCCA-ATTATATTGCCTATCGGCA-GAA-CTGAGGTGATGGGT-ACTCCA-TTGATT-ATTGTTGATTTGTAACTTTGTAA-GCTCA-TTAAGATTCA-GATTTGAGGAATA-TCTGAATTATCTTGTGATACGTGCTAG-TTGTAGTTTCTTATCTTGAGAAGAATATCTGGTTGACA-AATGTCAATTTCCTAGTTAGTCAGTCAAAACGGAATAAAGAAAATCAGCCTCTCTGCCCTATACCCCAATTGCTTGATTCTTGACAATTGAACACATCATATCATAAAGGAAGTCTTCATTGTTTTGATTGATTAAAAAAAAAAGA]

[+] EMBL AK120768             [GGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCGTCGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAACGAAAAAAACAACAGAGAAAAACTCCTCCCTCCTCCTCCCCCTCTGAAGCCATGGCTGCCTTCCCCCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATGGCTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCCATCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGGTTTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCGTCGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTGGCGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGGCGGGAGGCCTGGGCGATGCCCGCCGCCGCTGCCGTCGAGATGGTGCACACCATGTCGCTCGTCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAGCCCACCTGCCACGTCGTCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTCTCCCTCTCCTTCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCGCCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCGATAGGA TTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGCTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGGAGAAATCA CGGGAGTTTGCAGAAAAGTTGCTTTCTGATG CAAGGGAACA ACTTTCA GGATTTGATCA AGA GACCGCAGCA CCA CTTCTGCA CCTGGCCA ATTATATTGCCTATCGGCA GAA CTGAGGTGATGGGT ACTCCA TTGATT ATTGTTGATTTGTAACTTTGTAA GCTCA TTAAGATTCA GATTTGAGGAATA TCTGAATTATCTTGTGATACGTGCTAG TTGTAGTTTCTTATCTTGAGAAGAATATCTGGTTGACA AATGTCAATTTCCTAGTTAGTCAGTCAAAACGGAATAATGAAAATCAGCCTCTCTGCCCTATACCCCAATTGCTTGATTCTTGACAATTGAACACATCATATCATAAAGGAAGaaaata                           ]
[+] EMBL CB622734             [                  GCCCCCAAAGCTTTTAATCTAGATAAGAAGAAGCGTCGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAACGAAAAAAACAACAGAGAAAAACTCCTC   CCTCCTCCCCCTCTGAAGCCATGGCTGCCTTCCACCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATGGCTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCCATCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGGTTTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCGTCGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTGGCGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGGCGGGAGGCCTGGGCGATGCCCGCCGCCGCAGCCGTCTAGATGGAGCGCACCATGTCGCTCGGACGCGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF313006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCCCTCTCCTTCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCGCCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCGATAGGATTTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGCTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGGAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB622735             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGGTCGATAGGA TTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGCTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGGAGAAATCA CGGGAGTTTGCAGAAAAGTTGCTTTCTGATG CAAGGGAACA ACTTTCA GGATTTGATCA AGA GACCGCAGCA CCA CTTCTGCA CCTGGCCA ATTATATTGCCTATCGGCA GAA CTGAGGTGATGGGT ACTCCA TTGATT ATTGTTGATTTGTAACTTTGTAA GCTCA TTAAGATTCA GATTTGAGGAATA TCTGAATTATCTTGTGATACGTGCTAG TTGTAGTTTCTTATCTTGAGAAGAATATCTGGTTGACA AATGTCAATTTCCTAGTTAGTCAGTCAAAACGGAATAAAGAAAATCAGCCTCTCTGCCCTATACCCCAATTGCTTGATTCTTGACAATTGAACACATCATATCATAAAGGAAGTCTTCATTGTTTTGATTGATTAAAAAAAAAAGA]
[+] EMBL BQ908579             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TACCCGAAATTACTTGGGCTGGAGAAATCACCGGGAGTTTGCAGAAAAGTTGCTTTCTGATGCCAAGGGAACANACTTTCACGGATTTGATCACAGAGGACCGCAGCACCCACCTTNTGCACCCTGGCCACATTATATTGCCTATCGGCACGAACCTGAGGTGATGGGTAACTCCACTTGATTAATTGTTGATTTGTAACTTTGTAAGGCTCACTTAAGATTCACGATTTGAGGAATATTCTGAATTATCTTGTGATACGTGCTAGCTTGTAGTTTCTTATCTTGAGAAGAATATCTGGTTGACACAATGTCAATTTCCTAGTTAGTCAGTCCAAACGGAATAAAGAAAATCAGCCTCTCTGCCCTAaaaaaaaaa                                                                            ]
[+] EMBL CA765160             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATGTCAATTTCCTAGTTAGT NGTCAAAGCGGAATAAAGAAAATCAGCCTCTCTGCCCTATACCCCAATTGCTTGATTCTTGACAATTGAACACATCATATCATAAAGGAAGTCTTCATTGTTTTGATTG               ]




>consensus_12500#1
GGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCGTCGCAAC
TCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAACGAAAAA
AACAACAGAGAAAAACTCCTCCCTCCTCCTCCCCCTCTGAAGCCATGGCTGCCTTCCCCC
CGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATGGCTGGGA
CAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCCATCGTGG
CGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGGTTTGATT
TTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCGTCGATCC
CGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTGGCGGGCG
GGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGGCGGGAGG
CCTGGGCGATGCCCGCCGCCGCTGCCGTCGAGATGGTGCACACCATGTCGCTCGTCCACG
ACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAGCCCACCTGCCACGTCG
TCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTCTCCCTCTCCTTCCACC
ACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCGCCCGCG
TCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCC
AGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGT
ACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCT
TGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCGATAGGAT
TGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGCTCGGCA
AGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGG
AGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTCTGATGCAAGGGAACAACTTTCAGGAT
TTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATCGGCAGA
ACTGAGGTGATGGGTACTCCATTGATTATTGTTGATTTGTAACTTTGTAAGCTCATTAAG
ATTCAGATTTGAGGAATATCTGAATTATCTTGTGATACGTGCTAGTTGTAGTTTCTTATC
TTGAGAAGAATATCTGGTTGACAAATGTCAATTTCCTAGTTAGTCAGTCAAAACGGAATA
AAGAAAATCAGCCTCTCTGCCCTATACCCCAATTGCTTGATTCTTGACAATTGAACACAT
CATATCATAAAGGAAGTCTTCATTGTTTTGATTGATTAAAAAAAAAAGA

consensusID : consensus_12500#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence

                              [ACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCGCNCGCGTNGTNCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGTACATCCATCTCCACAAAACTGNTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGGTCGATAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTTTGAGGAGCTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTTTGATGCAAGGGAACAACTTTCAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATCGGCAGAACTGAGGTGATGGGTACTCCATTGATTATTGTTGATTTGTAACTTTGTAAGCTCATTAAGATTCAGATTTGAGGAATATCTGAATTATCTTGTGATACGTGCTAGTTGTAGTTTCTTATCTTGAGAAGAATATCTGGTTGCCAAAAAAAAAAAAA]

[-] EMBL CA759519             [ACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCGCNCGCGTNGTNCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGTACATCCATCTCCACAAAACTGNTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGGTCGATAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTTTGAGGAGCTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTTTGATGCAAGGGAACAACTTTCAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATCGGCAGAACTGAGGTGATGGGTACTCCATTGATTATTGTTGATTTGTAACTTTGTAAGCTCATTAAGATTCAGATTTGAGGAATATCTGAATTATCTTGTGATACGTGCTAGTTGTAGTTTCTTATCTTGAGAAGAATATCTGGTTGCCAAAAAAAAAAAAA]




>consensus_12500#2
ACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCGCNCGCG
TNGTNCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCGCCGGCC
AGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTCTTGAGT
ACATCCATCTCCACAAAACTGNTGCATTGCTTGAGGCATCAGTGGTTATTGGGGCAATCT
TGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGGTCGATAGGAT
TGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTTTGAGGAGCTCGGCA
AGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTGGGCTGG
AGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTTTGATGCAAGGGAACAACTTTCAGGAT
TTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATCGGCAGA
ACTGAGGTGATGGGTACTCCATTGATTATTGTTGATTTGTAACTTTGTAAGCTCATTAAG
ATTCAGATTTGAGGAATATCTGAATTATCTTGTGATACGTGCTAGTTGTAGTTTCTTATC
TTGAGAAGAATATCTGGTTGCCAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12500#1      ------GGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCGT 54
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      TGGAACGGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCGT 60
                                                                                   

consensus_12500#1      CGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAAC 114
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      CGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAAC 120
                                                                                   

consensus_12500#1      GAAAAAAACAACAGAGAAAAACTCCTCCCTCCTCCTCCCCCTCTGAAGCCATGGCTGCCT 174
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      GAAAAAAACAACAGAGAAAAACTCCTCCCTCCTCCTCCCCCTCTGAAGCCATGGCTGCCT 180
                                                                                   

consensus_12500#1      TCCCCCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATGG 234
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      TCCCCCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATGG 240
                                                                                   

consensus_12500#1      CTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCCA 294
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      CTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCCA 300
                                                                                   

consensus_12500#1      TCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGGT 354
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      TCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGGT 360
                                                                                   

consensus_12500#1      TTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCGT 414
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      TTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCGT 420
                                                                                   

consensus_12500#1      CGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTGG 474
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      CGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTGG 480
                                                                                   

consensus_12500#1      CGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGGC 534
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      CGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGGC 540
                                                                                   

consensus_12500#1      GGGAGGCCTGGGCGATGCCCGCCGCCGCTGCCGTCGAGATGGTGCACACCATGTCGCTCG 594
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      GGGAGGCCTGGGCGATGCCCGCCGCCGCCGCCGTCGAGATGGTGCACACCATGTCGCTCG 600
                                                                                   

consensus_12500#1      TCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAGCCCACCTGCC 654
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      TCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAGCCCACCTGCC 660
                                                                                   

consensus_12500#1      ACGTCGTCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTCTCCCTCTCCT 714
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      ACGTCGTCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTCTCCCTCTCCT 720
                                                                                   

consensus_12500#1      TCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCG 774
consensus_12500#2      ------ACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCG 54
consensus_12500#0      TCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCCG 780
                             ******************************************************

consensus_12500#1      CCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCG 834
consensus_12500#2      CNCGCGTNGTNCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCG 114
consensus_12500#0      CCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTCG 840
                       * ***** ** *************************************************

consensus_12500#1      CCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTC 894
consensus_12500#2      CCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTC 174
consensus_12500#0      CCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGTC 900
                       ************************************************************

consensus_12500#1      TTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGG 954
consensus_12500#2      TTGAGTACATCCATCTCCACAAAACTGNTGCATTGCTTGAGGCATCAGTGGTTATTGGGG 234
consensus_12500#0      TTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGGG 960
                       *************************** ********************************

consensus_12500#1      CAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCGA 1014
consensus_12500#2      CAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGGTCGA 294
consensus_12500#0      CAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCGA 1020
                       ******************************************************* ****

consensus_12500#1      TAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGC 1074
consensus_12500#2      TAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTTTGAGGAGC 354
consensus_12500#0      TAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAGC 1080
                       *************************************************** ********

consensus_12500#1      TCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTG 1134
consensus_12500#2      TCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTG 414
consensus_12500#0      TCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTTG 1140
                       ************************************************************

consensus_12500#1      GGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTCTGATGCAAGGGAACAACTTT 1194
consensus_12500#2      GGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTTTGATGCAAGGGAACAACTTT 474
consensus_12500#0      GGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTCTGATGCAAGGGAACAACTTT 1200
                       *************************************** ********************

consensus_12500#1      CAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATC 1254
consensus_12500#2      CAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATC 534
consensus_12500#0      CAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTATC 1260
                       ************************************************************

consensus_12500#1      GGCAGAACTGAGGTGATGGGTACTCCATTGATTATTGTTGATTTGTAACTTTGTAAGCTC 1314
consensus_12500#2      GGCAGAACTGAGGTGATGGGTACTCCATTGATTATTGTTGATTTGTAACTTTGTAAGCTC 594
consensus_12500#0      GGCAGAACTGAGGT------TCGTTTTACAATGAGTGTCAA--TGTAAGCTT-TGATTCA 1311
                       **************      *  *      ** * ***  *  *****  ** * *    

consensus_12500#1      ATTAAGATTCAGATTTGAGGAATATCTGAATTATCTTGTGATAC-GTGCTAGTTGTAGTT 1373
consensus_12500#2      ATTAAGATTCAGATTTGAGGAATATCTGAATTATCTTGTGATAC-GTGCTAGTTGTAGTT 653
consensus_12500#0      GGGATGAGCTTGTCTTGGAAATTGTTCTGTTGAACATGTGTTTCAGTGATGTTCTTCTGT 1371
                          * **    *  ***   * * *     * * * **** * * *** *  *  *   *

consensus_12500#1      TCTTATC--TTGAGAAGAATATCTGGTTGACAAATGTCAATTTCCTAGTTAGTCAGTCAA 1431
consensus_12500#2      TCTTATC--TTGAGAAGAATATCTGGTTGCCAAAAAAAAAAAAA---------------- 695
consensus_12500#0      TTACAGCAATTGGGATCAATGTTTCTCTAACAGCTATATATATGTATATTCTTGGTTCCA 1431
                       *   * *  *** **  *** * *   *  **       *                    

consensus_12500#1      AACGGAATAAAGAAAATCAGCCTCTCTGCCCTATACCCCAATTGCTTGATTCTTGACAAT 1491
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      AGCATGCAGAAAACTTCAATCAGAGAAAGTGTTTAGTTACAGTGCCGTAGTAAATAAATC 1491
                                                                                   

consensus_12500#1      -----TGAACACATCATATCATAAAGGAAGTCTTCATTGTTTTGATTGATTAAAAAAAAA 1546
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      GGTTATAATTGATTCCTGTCTATAGGTGTGCATTCAGTCTTTTGGTCAATTCGCTTTGTA 1551
                                                                                   

consensus_12500#1      AGA--------------------------------------------------------- 1549
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      GCAAAATTCAGTTAGTCAAAACTCAGGAATGAATTGTTATTGGGAAAAGGCAAGACCGAA 1611
                                                                                   

consensus_12500#1      ------------------------------------------------------------
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      ATTCGGTTAATCCTGTCTATTGCTCAAAAACCTATACAAGCCTTTCATAGTGAATGTAGC 1671
                                                                                   

consensus_12500#1      ------------------------------------------------------------
consensus_12500#2      ------------------------------------------------------------
consensus_12500#0      CCCTGCATAAGGTTTCCTGTACAGGTACAGTAGGACCTTGACTAAATGTTTTTCATTGGA 1731
                                                                                   

consensus_12500#1      --------------------------------
consensus_12500#2      --------------------------------
consensus_12500#0      ATAATGGAATGGTTATAAGCTGCACCTTTCTT 1763