|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12535#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3190 fasta sequence
[TCGACAACTAGCCCACCGCCACCGCCACCGCCGCCGAGGGCGATCCGATATGCATTTGCTGCTCCCGTAGAAGGCGCGCGTCGCAGCAATGGAGGCGGAGGACGACGAGCGAGCCGAGGCGGAGGCGGAGGCGCGGCGGGAGAAGGAGGCCGGCAACGCCGCCTACCGCAAGCTCTACCTCGAGACGGCCGTGCGCCACTACACCCGCGGCGCCCTCCTCGACCCCCGCGACATCTCCTTCCTCACCAACCGCGCCGCCGCCTACCTCCTCATGTCCAAGTACAAGGAGTGCGTGAGGGATTGCGACGAGGCGGTGGAGAAGGGGCGGGAGCTACGCGCCGACAACAAGCTGGTCGCGCGGGCGCTGGCGAGGAAGGCGTCGGCGCTGCTCAAGCTCGCCGCCTGCGCCGCGGACTACGACCCGGCGATCAGGGCGCTGCAGCAGTCGCTGGCCGAGCACTACAGCGAGGAGACGCTCGCCAAGCTGGGCGAGGCGGAGGAAGCCAGGAAGGAGATTGAGGAGCGGGAGCGGCTTGATCAGGAAGCTGCCGATCACCACCGAGACAGAGGCAACGATTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAAAGAACCCAAAAGATCCCAGGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAGCATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGAAAGGCTATCTGCGTAAAGCTAAAGTTCAGTTACTTATGGGCAATTATGAAATTGCTCTGGCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAAGTTCTTGATGGCTTAAGGAGATGTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCAGAGGACTTGAGAGAGATACTGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCAAAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCGGATTGAATCTGAACGATTGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACAAAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTTGAACAACTTAAAATACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTACTAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAATTGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAGAAAAGAGGACAGATGCTTTCAGTTTTGGTTACAGCGATGCACTGTGAATTTTCATCATCTGAAGTGGAATCTGCAACAGAAAATTTTAGTAATTCATTGAAGATTGGAGAAGGTGGGTTTGGCTGCGTATACAAAGGTATCCTCCGGAACATGACAGTTGCAATAAAGGTGCTGAGACCTGATAGTTTACAGGGACAATCACAGTTCGAACAAGAGGTTTCTATCCTCAGTAGAGTGAGACACCCTCACCTTGTGACTCTCTTAGGAGCTTGCTCAGAGTCTTCAACACTCGTATACGAGTTCCTGCCAAATGGAAGCCTAGAAGATTTTCTTATGTGTTCAGATGAGAGGCAAACTCTGACGTGGCAGGCTCGGATTCGAATTATTGCTGAGATATGTTCAGCACTAATCTTTCTGCATAAGAATAAACCTCACCCAGTTGTTCATGGAGATCTCAAGCCTGCTAACATTCTCCTTGGTGTTAACTTAGTCAGTAAGCTTAGTGACTTTGGTATTTCTCGCCTCCTAATCCAGTCCAGCACCAATAACACCACCCTGTACCGCACCATGCATCCTGTGGGCACCCCTCTGTACATGGACCCAGAATTTCTTTCCACTGGAGAGTTGACACCTCAGTCTGATGTTTATTCATTTGGTATTGTAGTCTTGCGTCTTTTAACAGGAAAGCCTCCTGTTGGTATAAAGAATATCGTGGAGGATGCAATGGAGAAAGGTGACTTGAACTCAGTAATTGATACCTCAGTGGGAGAGTGGCCTCATCTGCACATCGAGCAGCTGGCATACCTTGCTCTCAGATGCACTGAGTTAAGCAGGAGGTGCCGCCCTGATCTTTCAGGTGAGGTGTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTTCATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATATCTCAGGATATCATGGATGATCCTCACATTGCAGCAGATGGATTCACCTATGAAGCTGAGGCAATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTGAACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGCAGCACAGCATGTCGCTGTAGCCAACTGCCCTCCATGTGTGAGGCAAGTGAGCAAGTGGTACCAATTGGCAACTGTATAGTATTTGGGTAAATTCGGACATCCCCCCTTCTGATGCAATTTCGGTATGCCTTCTTTATTCAGATCAGGAGAAGTAGTTGAGTGAAGGTACTCCTACCTCTTTTATGATTTGAGGGTTGGATCCATCGTCGTCGTAAGGTAGGGGCCTCATGTACACTTGCTTGATCACAAGGCGACAGGTCTTCTGTTG-CAAAGGAAAGGACGACGTACCTAAGCATTGATGAATGATGATCGATGATGATGCTAGCTGCTTGTCCAGCTTCATGCACAGTTTTCACTACCTGGATTTTAGCACATGTTTCCTTTTGTCGGATACCAGCATGCATGTATGGACCAGCTGGGTGCTGCAAATTGGATGATGGATTGATGGTTATTGGTTCAGGTATTCAGGAGCA-GGCTGGTGCCCAGTGGGCCAGTTTGATACTTGTAGGTGGACCAAAGGAGCTTTGAAGGAATTTTCAGCAGATGAATTCTGGGAAC-TTTTTTTCGATTATGATATGCCTTTTGGGCTGCACAAATGGGAATAGAAGAAAATCTTGTAGAAATCACTTTCTTTCCTATGCTTTTGTAGTGATTTCAGACTTGGGTTTAAAGGCTGTGTTAAGATTTATTCCAGAAGTTCATTG]
[+] EMBL AK069675 [TCGACAACTAGCCCACCGCCACCGCCACCGCCGCCGAGGGCGATCCGATATGCATTTGCTGCTCCCGTAGAAGGCGCGCGTCGCAGCAATGGAGGCGGAGGACGACGAGCGAGCCGAGGCGGAGGCGGAGGCGCGGCGGGAGAAGGAGGCCGGCAACGCCGCCTACCGCAAGCTCTACCTCGAGACGGCCGTGCGCCACTACACCCGCGGCGCCCTCCTCGACCCCCGCGACATCTCCTTCCTCACCAACCGCGCCGCCGCCTACCTCCTCATGTCCAAGTACAAGGAGTGCGTGAGGGATTGCGACGAGGCGGTGGAGAAGGGGCGGGAGCTACGCGCCGACAACAAGCTGGTCGCGCGGGCGCTGGCGAGGAAGGCGTCGGCGCTGCTCAAGCTCGCCGCCTGCGCCGCGGACTACGACCCGGCGATCAGGGCGCTGCAGCAGTCGCTGGCCGAGCACTACAGCGAGGAGACGCTCGCCAAGCTGGGCGAGGCGGAGGAAGCCAGGAAGGAGATTGAGGAGCGGGAGCGGCTTGATCAGGAAGCTGCCGATCACCACCGAGACAGAGGCAACGATTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAAAGAACCCAAAAGATCCCAGGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAGCATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGAAAGGCTATCTGCGTAAAGCTAAAGTTCAGTTACTTATGGGCAATTATGAAATTGCTCTGGCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAAGTTCTTGATGGCTTAAGGAGATGTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCAGAGGACTTGAGAGAGATACTGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCAAAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCGGATTGAATCTGAACGATTGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACAAAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTTGAACAACTTAAAATACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTACTAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAATTGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAGAAAAGAGGACAGATGCTTTCAGTTTTGGTTACAGCGATGCACTGTGAATTTTCATCATCTGAAGTGGAATCTGCAACAGAAAATTTTAGTAATTCATTGAAGATTGGAGAAGGTGGGTTTGGCTGCGTATACAAAGGTATCCTCCGGAACATGACAGTTGCAATAAAGGTGCTGAGACCTGATAGTTTACAGGGACAATCACAGTTCGAACAAGAGGTTTCTATCCTCAGTAGAGTGAGACACCCTCACCTTGTGACTCTCTTAGGAGCTTGCTCAGAGTCTTCAACACTCGTATACGAGTTCCTGCCAAATGGAAGCCTAGAAGATTTTCTTATGTGTTCAGATGAGAGGCAAACTCTGACGTGGCAGGCTCGGATTCGAATTATTGCTGAGATATGTTCAGCACTAATCTTTCTGCATAAGAATAAACCTCACCCAGTTGTTCATGGAGATCTCAAGCCTGCTAACATTCTCCTTGGTGTTAACTTAGTCAGTAAGCTTAGTGACTTTGGTATTTCTCGCCTCCTAATCCAGTCCAGCACCAATAACACCACCCTGTACCGCACCATGCATCCTGTGGGCACCCCTCTGTACATGGACCCAGAATTTCTTTCCACTGGAGAGTTGACACCTCAGTCTGATGTTTATTCATTTGGTATTGTAGTCTTGCGTCTTTTAACAGGAAAGCCTCCTGTTGGTATAAAGAATATCGTGGAGGATGCAATGGAGAAAGGTGACTTGAACTCAGTAATTGATACCTCAGTGGGAGAGTGGCCTCATCTGCACATCGAGCAGCTGGCATACCTTGCTCTCAGATGCACTGAGTTAAGCAGGAGGTGCCGCCCTGATCTTTCAGGTGAGGTGTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTTCATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATATCTCAGGATATCATGGATGATCCTCACATTGCAGCAGATGGATTCACCTATGAAGCTGAGGCAATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTGAACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGCAGCACAGCATGTCGCTGTAGCCAACTGCCCTCCATGTGTGAGGCAAGTGAGCAAGTGGTACCAATTGGCAACTGTATAGTATTTGGGTAAATTCGGACATCCCCCCTTCTGATGCAATTTCGGTATGCCTTCTTTATTCAGATCAGGAGAAGTAGTTGAGTGAAGGTACTCCTACCTCTTTTATGATTTGAGGGTTGGATCCATCGTCGTCGTAAGGTAGGGGCCTCATGTACACTTGCTTGATCACAAGGCGACAGGTCTTCTGTTG CAAAGGAAAGGACGACGTACCTAAGCATTGATGAATGATGATCGATGATGATGCTAGCTGCTTGTCCAGCTTCATGCACAGTTTTCACTACCTGGATTTTAGCACATGTTTCCTTTTGTCGGATACCAGCATGCATGTATGGACCAGCTGGGTGCTGCAAATTGGATGATGGATTGATGGTTATTGGTTCAGGTATTCAGGAGCA GGCTGGTGCCCAGTGGGCCAGTTTGATACTTGTAGGTGGACCAAAGGAGCTTTGAAGGAATTTTCAGCAGATGAATTCTGGGAAC TTTTTTTCGATTATGATATGCCTTTTGGGCTGCACAAATGGGAATAGAAGAAAATCTTGTAGAAATCACTTTCTTTCCTATGCTTTTGTAGTGATTTCAGACTTGGGTTTAAAGGCTGTGTTAAGATTTATTCCAGAAGTTCATTG]
[+] EMBL BM038355 [ TGATTTGAGGGTTGGATCCATCGTCGTCGTAA GTA GGGCCTCATGTACACTTGCTTGATCACAAGGCGACAGGTCTTCTGTTGCCAAAGGAAAGGACGACGTACCTAAGCCTTGATGAATGATGATCGATGATGATGCTAGCTGCTTGTCCAGCTTCATGCNCAGTTTTCACTACCTGGATTTTAGCACATGTTTCCTTTTGTCGGATACCAGCATGCATGTATGGACCAGCTGGGTGCTGCCAATTGGATGATGGATTGATGGTTATTGGTTCAGGTATTCAGGAGCACGGCTGGTGCCCCGTGGGCCAGTTTGATACTTGTAGGTGGACCCAAGGAGCTTTGAAGGAATTTTCAGCAGACGAATTCTGGGAACTTTTTTTTCGATTATGATATNCCTTTTGGGCTGCACCAATGGGAATAGAAGAAAATCTTGTAGAAATCACTTTCTTTCCTATGCTTTTGTAGTGATTTCAGACTTGGGTTTAAAaaaaaaa ]
consensusID : consensus_12535#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3023 fasta sequence
[GTCTCCTCCTCTTCCTCATCCCCCCTCGACAACTAGCCCACCGCCACCGCCACCGCCGCCGAGGGCGATCCGATATGCATTTGCTGCTCCCGTAGAAGGCGCGCGTCGCAGCAATGGAGGCGGAGGACGACGAGCGAGCCGAGGCGGAGGCGGAGGCGCGGCGGGAGAAGGAGGCCGGCAACGCCGCCTACCGCAAGCTCTACCTCGAGACGGCCGTGCGCCACTACACCCGCGGCGCCCTCCTCGACCCCCGCGACATCTCCTTCCTCACCAACCGCGCCGCCGCCTACCTCCTCATGTCCAAGTACAAGGAGTGCGTGAGGGATTGCGACGAGGCGGTGGAGAAGGGGCGGGAGCTACGCGCCGACAACAAGCTGGTCGCGCGGGCGCTGGCGAGGAAGGCGTCGGCGCTGCTCAAGCTCGCCGCCTGCGCCGCGGACTACGACCCGGCGATCAGGGCGCTGCAGCAGTCGCTGGCCGAGCACTACAGCGAGGAGACGCTCGCCAAGCTGGGCGAGGCGGAGGAAGCCAGGAAGGAGATTGAGGAGCGGGAGCGGCTTGATCAGGAAGCTGCCGATCACCACCGAGACAGAGGCAACGATTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAAAGAACCCAAAAGATCCCAGGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAGCATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGAAAGGCTATCTGCGTAAAGCTAAAGTTCAGTTACTTATGGGCAATTATGAAATTGCTCTGGCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAAGTTCTTGATGGCTTAAGGAGATGTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCAGAGGACTTGAGAGAGATACTGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCAAAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCGGATTGAATCTGAACGATTGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACAAAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTTGAACAACTTAAAATACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTACTAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAATTGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAGAAAAGAGGACAGATGCTTTCAGTTTTGGTTACAGCGATGCACTGTGAATTTTCATCATCTGAAGTGGAATCTGCAACAGAAAATTTTAGTAATTCATTGAAGATTGGAGAAGGTGGGTTTGGCTGCGTATACAAAGGTATCCTCCGGAACATGACAGTTGCAATAAAGGTGCTGAGACCTGATAGTTTACAGGGACAATCACAGTTCGAACAAGAGGTTTCTATCCTCAGTAGAGTGAGACACCCTCACCTTGTGACTCTCTTAGGAGCTTGCTCAGAGTCTTCAACACTCGTATACGAGTTCCTGCCAAATGGAAGCCTAGAAGATTTTCTTATGTGTTCAGATAAGAGGCAAACTCTGACGTGGCAGGCTCGGATTCGAATTATTGCTGAGATATGTTCAGCACTAATCTTTCTGCATAAGAATAAACCTCACCCAGTTGTTCATGGAGATCTCAAGCCTGCTAACATTCTCCTTGGTGTTAACTTAGTCAGTAAGCTTAGTGACTTTGGTATTTCTCGCCTCCTAATCCAGTCCAGCACCAATAACACCACCCTGTACCGCACCATGCATCCTGTGGGCACCCCTCTGTACATGGACCCAGAATTTCTTTCCACTGGAGAGTTGACACCTCAGTCTGATGTTTATTCATTTGGTATTGTAGTCTTGCGTCTTTTAACAGGAAAGCCTCCTGTTGGTATAAAGAATATCGTGGAGGATGCAATGGAGAAAGGTGACTTGAACTCAGTAATTGATACCTCAGTGGGAGAGTGGCCTCATCTGCACATCGAGCAGCTGGCATACCTTGCTCTCAGATGCACTGAGTTAAGCAGGAGGTGCCGCCCTGATCTTTCAGGTGAGGTGTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTTCATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATATCTCAGGATATCATGGATGATCCTCACA-TTGCAG-CAGAT-GGATTC-ACCTATGAAGCTGAGGCA-ATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTGAACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGCAGCACAGCATGTCGCTGTAGCCAACTGCCCTCCATGTGTGAAGCAA-GTGAG-CAAGTGGTACCAA-TTGGC-AACTGTATAGTATTTGGGTAAATTCGGACATCCCCCCTTCTGATGCAATTTCGGTATGCCTTCTTTATTCAGGTATGTATTTCGTAGTAGCATGTAATGTAAAGGCAGTGTTGGGTAAAACCTGTTAACTTGGATAGCAAGGACAAAAGCTCTATGTCGGTATGCCTATCACTCCTAAGGGCATCCCATGCGTTCTTCTGCCTTTGAACTTAATCTTATCCAAGTTTGATTATGTTCATACCAGCTTGCCAGTGCCATGAGTTTGATTGTGTGTATCGGCCAGTTTATCTAAAATGTCAAAGAGTTAATGAGGAAACATAGCTGAAAGCCTGAAACTATTTCTGTTCTCAAATGGATGATGTCCTACAATGCATGTCGTGAAACCTTTGAAATCTTATATCACTAATATATATACAGAAATGGCAGGGTTTAAAAATGTGATA]
[+] EMBL AK069245 [GTCTCCTCCTCTTCCTCATCCCCCCTCGACAACTAGCCCACCGCCACCGCCACCGCCGCCGAGGGCGATCCGATATGCATTTGCTGCTCCCGTAGAAGGCGCGCGTCGCAGCAATGGAGGCGGAGGACGACGAGCGAGCCGAGGCGGAGGCGGAGGCGCGGCGGGAGAAGGAGGCCGGCAACGCCGCCTACCGCAAGCTCTACCTCGAGACGGCCGTGCGCCACTACACCCGCGGCGCCCTCCTCGACCCCCGCGACATCTCCTTCCTCACCAACCGCGCCGCCGCCTACCTCCTCATGTCCAAGTACAAGGAGTGCGTGAGGGATTGCGACGAGGCGGTGGAGAAGGGGCGGGAGCTACGCGCCGACAACAAGCTGGTCGCGCGGGCGCTGGCGAGGAAGGCGTCGGCGCTGCTCAAGCTCGCCGCCTGCGCCGCGGACTACGACCCGGCGATCAGGGCGCTGCAGCAGTCGCTGGCCGAGCACTACAGCGAGGAGACGCTCGCCAAGCTGGGCGAGGCGGAGGAAGCCAGGAAGGAGATTGAGGAGCGGGAGCGGCTTGATCAGGAAGCTGCCGATCACCACCGAGACAGAGGCAACGATTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAAAGAACCCAAAAGATCCCAGGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAGCATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGAAAGGCTATCTGCGTAAAGCTAAAGTTCAGTTACTTATGGGCAATTATGAAATTGCTCTGGCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAAGTTCTTGATGGCTTAAGGAGATGTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCAGAGGACTTGAGAGAGATACTGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCAAAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCGGATTGAATCTGAACGATTGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACAAAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTTGAACAACTTAAAATACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTACTAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAATTGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAGAAAAGAGGACAGATGCTTTCAGTTTTGGTTACAGCGATGCACTGTGAATTTTCATCATCTGAAGTGGAATCTGCAACAGAAAATTTTAGTAATTCATTGAAGATTGGAGAAGGTGGGTTTGGCTGCGTATACAAAGGTATCCTCCGGAACATGACAGTTGCAATAAAGGTGCTGAGACCTGATAGTTTACAGGGACAATCACAGTTCGAACAAGAGGTTTCTATCCTCAGTAGAGTGAGACACCCTCACCTTGTGACTCTCTTAGGAGCTTGCTCAGAGTCTTCAACACTCGTATACGAGTTCCTGCCAAATGGAAGCCTAGAAGATTTTCTTATGTGTTCAGATAAGAGGCAAACTCTGACGTGGCAGGCTCGGATTCGAATTATTGCTGAGATATGTTCAGCACTAATCTTTCTGCATAAGAATAAACCTCACCCAGTTGTTCATGGAGATCTCAAGCCTGCTAACATTCTCCTTGGTGTTAACTTAGTCAGTAAGCTTAGTGACTTTGGTATTTCTCGCCTCCTAATCCAGTCCAGCACCAATAACACCACCCTGTACCGCACCATGCATCCTGTGGGCACCCCTCTGTACATGGACCCAGAATTTCTTTCCACTGGAGAGTTGACACCTCAGTCTGATGTTTATTCATTTGGTATTGTAGTCTTGCGTCTTTTAACAGGAAAGCCTCCTGTTGGTATAAAGAATATCGTGGAGGATGCAATGGAGAAAGGTGACTTGAACTCAGTAATTGATACCTCAGTGGGAGAGTGGCCTCATCTGCACATCGAGCAGCTGGCATACCTTGCTCTCAGATGCACTGAGTTAAGCAGGAGGTGCCGCCCTGATCTTTCAGGTGAGGTGTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTTCATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATATCTCAGGATATCATGGATGATCCTCACA TTGCAG CAGAT GGATTC ACCTATGAAGCTGAGGCA ATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTGAACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGCAGCACAGCATGTCGCTGTAGCCAACTGCCCTCCATGTGTGAAGCAA GTGAG CAAGTGGTACCAA TTGGC AACTGTATAGTATTTGGGTAAATTCGGACATCCCCCCTTCTGATGCAATTTCGGTATGCCTTCTTTATTCAGGTATGTATTTCGTAGTAGCATGTAATGTAAAGGCAGTGTTGGGTAAAACCTGTTAACTTGGATAGCAAGGACAAAAGCTCTATGTCGGTATGCCTATCACTCCTAAGGGCATCCCATGCGTTCTTCTGCCTTTGAACTTAATCTTATCCAAGTTT ]
[+] EMBL AK072504 [ TCGACAACTAGCCCACCGCCACCGCCACCGCCGCCGAGGGCGATCCGATATGCATTTGCTGCTCCCGTAGAAGGCGCGCGTCGCAGCAATGGAGGCGGAGGACGACGAGCGAGCCGAGGCGGAGGCGGAGGCGCGGCGGGAGAAGGAGGCCGGCAACGCCGCCTACCGCAAGCTCTACCTCGAGACGGCCGTGCGCCACTACACCCGCGGCGCCCTCCTCGACCCCCGCGACATCTCCTTCCTCACCAACCGCGCCGCCGCCTACCTCCTCATGTCCAAGTACAAGGAGTGCGTGAGGGATTGCGACGAGGCGGTGGAGAAGGGGCGGGAGCTACGCGCCGACAACAAGCTGGTCGCGCGGGCGCTGGCGAGGAAGGCGTCGGCGCTGCTCAAGCTCGCCGCCTGCGCCGCGGACTACGACCCGGCGATCAGGGCGCTGCAGCAGTCGCTGGCCGAGCACTACAGCGAGGAGACGCTCGCCAAGCTGGGCGAGGCGGAGGAAGCCAGGAAGGAGATTGAGGAGCGGGAGCGGCTTGATCAGGAAGCTGCCGATCACCACCGAGACAGAGGCAACGTTTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAAAGAACCCAAAAGATCCCAGGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAGCATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGAAAGGCTATCTGCGTAAAGCTAAAGTTCAGTTACTTATGGGCAATTATGAAATTGCTCTGGCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAAGTTCTTGATGGCTTAAGGAGATGTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCAGAGGACTTGAGAGAGATACTGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCAAAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCGGATTGAATCTGAACGATTGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACAAAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTTGAACAACTTAAAATACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTACTAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAATTGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAGAAAAGAGGACAGATGCTTTCAGTTTTGGTTACAGCGATGCACTGTGAATTTTCATCATCTGAAGTGGAATCTGCAACAGAAAATTTTAGTAATTCATTGAAGATTGGAGAAGGTGGGTTTGGCTGCGTATACAAAGGTATCCTCCGGAACATGACAGTTGCAATAAAGGTGCTGAGACCTGATAGTTTACAGGGACAATCACAGTTCGAACAAGAGGTTTCTATCCTCAGTAGAGTGAGACACCCTCACCTTGTGACTCTCTTAGGAGCTTGCTCAGAGTCTTCAACACTCGTATACGAGTTCCTGCCAAATGGAAGCCTAGAAGATTTTCTTATGTGTTCAGATAAGAGGCAAACTCTGACGTGGCAGGCTCGGATTCGA ]
[+] EMBL CB684359 [ TCAGGAAGCTGCCGATCACCACCGAGACAGAGGCAACGATTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAAAGAACCCAAAAGATCCCAGGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAGCATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGAAAGGCTATCTGCGTAAAGCTAAAGTTCAGTTACTTATGGGCAATTATGAAATTGCTCTGGCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAAGTTCTTGATGGCTTAAGGAGATGTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCAGAGGACTTGAGAGAGATACTGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCAAAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCGGATTGAATCTGAACGATTGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACAAAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTTGAACAACTTAAAATACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTACTAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAATTGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAG AAAGAGGACAGATGCTTTCAGTTTTGGTTA ]
[-] EMBL CB684360 [ GGAGGTGCCGCCCTGATCTTTCAGGTGAGGTGTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTTCATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATATCTCAGGATATCATGGATGATCCTCACA TTGCAG CAGAT GGATTC ACCTATGAAGCTGAGGCA ATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTGAACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTTTGCTATTCAGGAGTGGCTCCAGCAGCACAGCATGTCGCTGTAGCCAACTGCCCTCCATGTGTGAAGCAA GTGAG CAAGTGGTACCAA TTGGC AACTGTATAGTATTTGGGTAAATTCGGACATCCCCCCTTCTGATGCAATTTCGGTATGCCTTCTTTATTCAGGTATGTATTTCGTAGTAGCATGTAATGTAAAGGCAGTGTTGGGTAAAACCTGTTAACTTGGATAGCAAGGACAAAAGCTCTATGTCGGTATGCCTATCACTCCTAAGGGCATCCCATGCGTTCTTCTGCCTTTGAACTTAATCTTATCCAAGTTTGATTATGTTCATACCAGCTTGCCAGTGCCATGAGTTTGATTGTGTGTATCGGCCAGTTTATCTAAAATGTCAAAGAGTTAATGAGGAAACATAGCT ]
[+] EMBL CB661779 [ GTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTTCATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATATCTCAGGATATCATGGATGATCCTCACA TTGCAG CAGAT GGATTC ACCTATGAAGCTGAGGCA ATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTGAACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGCAGCACAGCATGTCGCTGTAGCCAACTGCCCTCCATGTGTGAAGCAA GTGAG CAAGTGGTACCAA TTGGC AACTGTATAGTATTTGGGTAAATTCGGACATCCCCCCTTCTGATGCAATTTCGGTATGCCTTCTTTATTCAGGTATGTATTTCGTAGTAGCATGTAATGTAAAGGCAGTGTTGGGTAAAACCTGTTAACTTGGATAGCAAGGACAAAAGCTCTATGTCGGTATGCCTATCACTCCTAAGGGCATCCCATGCGTTCTTCTGCCTTTGAACTTAATCTTATCCAAGTTTGATTATGTTCATACCAGCTTGCCAGTGCCATGAGTTTGATTGTGTGTATCGGCCAGTTTATCTAAAATGTCAAAGAGTTAATGAGGAAACATAGCTGAAAGCCTGAAACTATTTCTGTTCTCAAATGGATGATGTCCTACAATGCATGTCGTGAAACCTTTGAAATCTTATATCACTAATATATATACAGAAATGGCAGGGTTTAAAAATGTGATA]
[+] EMBL BI812595 [ atTCATGGATGATCCTCACACTTGCAGCCAGATGGGATTCAACCTATGAA CTGA GCACATCAGGA TTGGCTCTGCAAT GCCATGACACGTCTCCAATGACC ACTTGCGACTTGAACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGCAGCACAGCATGTCGCTGTAGCCAACTGCCCTCCATGTGTGAAGCAA GTGAG CAAGTGGTACC A TTGGC AACTGTATAGTATTTGGGTAAATTTGGACATCCCCCCTTCTGATGCAATTTCGGTATGCCTTCTTTATTCAGGTATGTATTTCGTAGTAGCATGTAATGTAAAGGCAGTGTTGGGTAAAACCTGTTAACTTGGATAGCAAGGAC AAAGCTCTATGTCGGTATGCCTATCACTCCTAAGGGCATCCCATGCGTTCTTCTGCCTTTGAACTTAATCTTATCCAAGTTTGATTATGTTCAaaaa ]
[+] EMBL BI811980 [ AAGCAAGGTGAGCCAAGTGGGACCAAGGTGGCAAACTGTATAGTATTTGGGTAAATTTGGACATCCCCCCTTCTGATGCAATTTCGGTATGCCTTCTTTATTCAGGTATGTATTTCGTAGTAGCATGTAATGTAAAGCCAGTGTTGGGTAAAACCTGTTAACTTGGATAGCAAGGAC AAAGCTCTATGTCGGTATGCCTATCACTCCTAAGGGCATCCCATGCGTTCTTCTGCCTTTGAACTTAATCTTATCCAAGTTTGATTATGTTCAaaaaa ]
consensusID : consensus_12535#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 755 fasta sequence
[TAGTTTTTTTTAATAAATATACAGTCTGAGAAAGTATCATACATGTGCAACTGTGTCATCTCCAAGACGACATCTTTTTTTACAACAGAAGTGGTATATTTTAGCTTTCATTTCTATGAAGAATGAAAAAAGACAATATTTTATTTATTTTATTATACAAATCTAAAACGAATTTATTTCAGATCAGGAGAAGTAGTTGAGTGAAGGTACTCCTACCTCTTTTATGATTTGAGGGTTGGATCCATCGTCGTCGTAAGGTAGGGGCCTCATGTACACTTGCTTGATCACAAGGCGACAGGTCTTCTGTTGCAAAGGAAAGGACGACGTACCTAAGCATTGATGAATGATGATCGATGATGATGCTAGCTGCTTGTCCAGCTTCATGCACAGTTTTCACTACCTGGATTTTAGCACATGTTTCCTTTTGTCGGATACCAGCATGCATGTATGGACCAGCTGGGTGCTGCAAATTGGATGATGGATTGATGGTTATTGGTTCAGGTATTCAGGAGCAGGCTGGTGCCCAGTGGGCCAGTTTGATACTTGTAGGTGGACCAAAGGAGCTTTGAAGGAATTTTCAGCAGATGAATTCTGGGAACTTTTTTTTCGATTATGATATGCCTTTTGGGCTGCACAAATGGGAATAGAAGAAAATCTTGTAGAAATCACTTACTTACCTATGCTTTTGTAGTGATTTCAGACTTGGGTTTAAAGAGCTGTGTTAAGATTTATTTCCGGAAGTTCGTTGCGAGAGT]
[-] EMBL CB661780 [TAGTTTTTTTTAATAAATATACAGTCTGAGAAAGTATCATACATGTGCAACTGTGTCATCTCCAAGACGACATCTTTTTTTACAACAGAAGTGGTATATTTTAGCTTTCATTTCTATGAAGAATGAAAAAAGACAATATTTTATTTATTTTATTATACAAATCTAAAACGAATTTATTTCAGATCAGGAGAAGTAGTTGAGTGAAGGTACTCCTACCTCTTTTATGATTTGAGGGTTGGATCCATCGTCGTCGTAAGGTAGGGGCCTCATGTACACTTGCTTGATCACAAGGCGACAGGTCTTCTGTTGCAAAGGAAAGGACGACGTACCTAAGCATTGATGAATGATGATCGATGATGATGCTAGCTGCTTGTCCAGCTTCATGCACAGTTTTCACTACCTGGATTTTAGCACATGTTTCCTTTTGTCGGATACCAGCATGCATGTATGGACCAGCTGGGTGCTGCAAATTGGATGATGGATTGATGGTTATTGGTTCAGGTATTCAGGAGCAGGCTGGTGCCCAGTGGGCCAGTTTGATACTTGTAGGTGGACCAAAGGAGCTTTGAAGGAATTTTCAGCAGATGAATTCTGGGAACTTTTTTTTCGATTATGATATGCCTTTTGGGCTGCACAAATGGGAATAGAAGAAAATCTTGTAGAAATCACTTACTTACCTATGCTTTTGTAGTGATTTCAGACTTGGGTTTAAAGAGCTGTGTTAAGATTTATTTCCGGAAGTTCGTTGCGAGAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12535#0 -------------------------TCGACAACTAGCCCACCGCCACCGCCACCGCCGCC 35
consensus_12535#1 GTCTCCTCCTCTTCCTCATCCCCCCTCGACAACTAGCCCACCGCCACCGCCACCGCCGCC 60
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 GAGGGCGATCCGATATGCATTTGCTGCTCCCGTAGAAGGCGCGCGTCGCAGCAATGGAGG 95
consensus_12535#1 GAGGGCGATCCGATATGCATTTGCTGCTCCCGTAGAAGGCGCGCGTCGCAGCAATGGAGG 120
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CGGAGGACGACGAGCGAGCCGAGGCGGAGGCGGAGGCGCGGCGGGAGAAGGAGGCCGGCA 155
consensus_12535#1 CGGAGGACGACGAGCGAGCCGAGGCGGAGGCGGAGGCGCGGCGGGAGAAGGAGGCCGGCA 180
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 ACGCCGCCTACCGCAAGCTCTACCTCGAGACGGCCGTGCGCCACTACACCCGCGGCGCCC 215
consensus_12535#1 ACGCCGCCTACCGCAAGCTCTACCTCGAGACGGCCGTGCGCCACTACACCCGCGGCGCCC 240
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TCCTCGACCCCCGCGACATCTCCTTCCTCACCAACCGCGCCGCCGCCTACCTCCTCATGT 275
consensus_12535#1 TCCTCGACCCCCGCGACATCTCCTTCCTCACCAACCGCGCCGCCGCCTACCTCCTCATGT 300
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CCAAGTACAAGGAGTGCGTGAGGGATTGCGACGAGGCGGTGGAGAAGGGGCGGGAGCTAC 335
consensus_12535#1 CCAAGTACAAGGAGTGCGTGAGGGATTGCGACGAGGCGGTGGAGAAGGGGCGGGAGCTAC 360
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 GCGCCGACAACAAGCTGGTCGCGCGGGCGCTGGCGAGGAAGGCGTCGGCGCTGCTCAAGC 395
consensus_12535#1 GCGCCGACAACAAGCTGGTCGCGCGGGCGCTGGCGAGGAAGGCGTCGGCGCTGCTCAAGC 420
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TCGCCGCCTGCGCCGCGGACTACGACCCGGCGATCAGGGCGCTGCAGCAGTCGCTGGCCG 455
consensus_12535#1 TCGCCGCCTGCGCCGCGGACTACGACCCGGCGATCAGGGCGCTGCAGCAGTCGCTGGCCG 480
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 AGCACTACAGCGAGGAGACGCTCGCCAAGCTGGGCGAGGCGGAGGAAGCCAGGAAGGAGA 515
consensus_12535#1 AGCACTACAGCGAGGAGACGCTCGCCAAGCTGGGCGAGGCGGAGGAAGCCAGGAAGGAGA 540
consensus_12535#2 -----------------------------------TAGTTTTTTTTAATAAATATACAGT 25
** * * * **
consensus_12535#0 TTGAGGAGCGGGAGCGGCTTGATCAGGAAGCTGCCGATCACCACCGAGACAGAGGCAACG 575
consensus_12535#1 TTGAGGAGCGGGAGCGGCTTGATCAGGAAGCTGCCGATCACCACCGAGACAGAGGCAACG 600
consensus_12535#2 CTGAGAA-----AGTATCATACATGTGCAACTGT--GTCATCTCCAAGAC---GACATCT 75
**** * ** * * * * *** *** * ** **** * ** *
consensus_12535#0 ATTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAA 635
consensus_12535#1 ATTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAA 660
consensus_12535#2 TTTTTTACAA-CAGAAGTGGTATATTTTAGCT----TTCATTTCTATGAAGA-ATGAAAA 129
*** * *** ***** **** *** * ** * ***** *******
consensus_12535#0 AGAACCCAAAAGATCCCAGGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAG 695
consensus_12535#1 AGAACCCAAAAGATCCCAGGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAG 720
consensus_12535#2 AAGAC----AATATTTTATTTATTTTATTATACAAATCTAAAACGA-ATTTATTTCAGAT 184
* ** ** ** * ***** * * * ** * * ** ** * **
consensus_12535#0 CATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGA 755
consensus_12535#1 CATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGA 780
consensus_12535#2 CAGGA---GAAGTAGTTGAGTGAAGGTACTCCTACCTCTTTTATGATTTGAGGGTTG-GA 240
** **** **** * * * * * *** * ** **
consensus_12535#0 AAGGCTATCTGCGTAAAGCTAAAGT-TCAGTTACTTATGGGCAATTATGAAATTGCTCTG 814
consensus_12535#1 AAGGCTATCTGCGTAAAGCTAAAGT-TCAGTTACTTATGGGCAATTATGAAATTGCTCTG 839
consensus_12535#2 TCCATCGTCGTCGTAAGGTAGGGGCCTCATGTACACTTGCTTGATCAC-AAGGCGACAGG 299
** ***** * * *** *** ** ** * ** * *
consensus_12535#0 GCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAA-----GTTCTTGATG 869
consensus_12535#1 GCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAA-----GTTCTTGATG 894
consensus_12535#2 TCTTCTGTTGCAAAGGAAAGGACGACGTACCTAAGCATTGATGAATGATGATCGATGATG 359
* ** ** * *** ** * *** ** ** *** * *****
consensus_12535#0 GCTTAAGGAGAT-GTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCA-GA 927
consensus_12535#1 GCTTAAGGAGAT-GTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCA-GA 952
consensus_12535#2 ATGCTAGCTGCTTGTCCAGC-TTCATGCACAGTTTTCACTACCTGGATTTTAGCACATGT 418
** * * ** **** * *** * ** * * * **** *** ** *
consensus_12535#0 GGACTTGAGAGAGATACTGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCA 987
consensus_12535#1 GGACTTGAGAGAGATACTGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCA 1012
consensus_12535#2 TTCCTTTTGTCGGATACCAGCATGCATGTAT--GGACCA-GCTGGGTGCTGCAAA-TTGG 474
*** * ***** * * ** ** * * * * * *** *** **
consensus_12535#0 AAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCG 1047
consensus_12535#1 AAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCG 1072
consensus_12535#2 ATGATGGATTGATG--GTTATTG-GTTCAGGTATTCAGGAGCAGGCTGGTGCCCA--GTG 529
* * * ** **** * * * *** * * * ** * * * * * ** * * *
consensus_12535#0 GATTGAATCTGAACGATTGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACA 1107
consensus_12535#1 GATTGAATCTGAACGATTGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACA 1132
consensus_12535#2 GGCC-AGTTTGA--TACTTGTAGGTGGACCAAAGGAGCT---TTGAAGGAATTTTCAGCA 583
* * * *** * * * * * * ** * ** *** * * ** **
consensus_12535#0 AAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTT-GAACAACTTAAAA 1166
consensus_12535#1 AAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTT-GAACAACTTAAAA 1191
consensus_12535#2 GATGAA----TTCTGGGAACTTTTTTTTCGATTATGATATGCCTTTTGGGCTGCACAAAT 639
* *** **** * *** * ** * * * *** * * * ***
consensus_12535#0 TACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTAC 1226
consensus_12535#1 TACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTAC 1251
consensus_12535#2 GGGAATAGAAGAAAATC-TTGTAGAAATC-----ACTTACTTACCT--ATGCTTTTGTAG 691
* * * * ** ** *** * * * * * * * *** * **
consensus_12535#0 TAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAAT 1286
consensus_12535#1 TAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAAT 1311
consensus_12535#2 TGATTTCAGACTTGGGTTT-AAAGAGCTGTGTTAA-GATTTATTTCCGGAAGT------T 743
* * * ** * * * ***** * * ** * ** * ** * * *
consensus_12535#0 TGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAGAAAAGAGGAC 1346
consensus_12535#1 TGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAGAAAAGAGGAC 1371
consensus_12535#2 CGTTGCGAGAGT------------------------------------------------ 755
* * ** **
consensus_12535#0 AGATGCTTTCAGTTTTGGTTACAGCGATGCACTGTGAATTTTCATCATCTGAAGTGGAAT 1406
consensus_12535#1 AGATGCTTTCAGTTTTGGTTACAGCGATGCACTGTGAATTTTCATCATCTGAAGTGGAAT 1431
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CTGCAACAGAAAATTTTAGTAATTCATTGAAGATTGGAGAAGGTGGGTTTGGCTGCGTAT 1466
consensus_12535#1 CTGCAACAGAAAATTTTAGTAATTCATTGAAGATTGGAGAAGGTGGGTTTGGCTGCGTAT 1491
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 ACAAAGGTATCCTCCGGAACATGACAGTTGCAATAAAGGTGCTGAGACCTGATAGTTTAC 1526
consensus_12535#1 ACAAAGGTATCCTCCGGAACATGACAGTTGCAATAAAGGTGCTGAGACCTGATAGTTTAC 1551
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 AGGGACAATCACAGTTCGAACAAGAGGTTTCTATCCTCAGTAGAGTGAGACACCCTCACC 1586
consensus_12535#1 AGGGACAATCACAGTTCGAACAAGAGGTTTCTATCCTCAGTAGAGTGAGACACCCTCACC 1611
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TTGTGACTCTCTTAGGAGCTTGCTCAGAGTCTTCAACACTCGTATACGAGTTCCTGCCAA 1646
consensus_12535#1 TTGTGACTCTCTTAGGAGCTTGCTCAGAGTCTTCAACACTCGTATACGAGTTCCTGCCAA 1671
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 ATGGAAGCCTAGAAGATTTTCTTATGTGTTCAGATGAGAGGCAAACTCTGACGTGGCAGG 1706
consensus_12535#1 ATGGAAGCCTAGAAGATTTTCTTATGTGTTCAGATAAGAGGCAAACTCTGACGTGGCAGG 1731
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CTCGGATTCGAATTATTGCTGAGATATGTTCAGCACTAATCTTTCTGCATAAGAATAAAC 1766
consensus_12535#1 CTCGGATTCGAATTATTGCTGAGATATGTTCAGCACTAATCTTTCTGCATAAGAATAAAC 1791
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CTCACCCAGTTGTTCATGGAGATCTCAAGCCTGCTAACATTCTCCTTGGTGTTAACTTAG 1826
consensus_12535#1 CTCACCCAGTTGTTCATGGAGATCTCAAGCCTGCTAACATTCTCCTTGGTGTTAACTTAG 1851
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TCAGTAAGCTTAGTGACTTTGGTATTTCTCGCCTCCTAATCCAGTCCAGCACCAATAACA 1886
consensus_12535#1 TCAGTAAGCTTAGTGACTTTGGTATTTCTCGCCTCCTAATCCAGTCCAGCACCAATAACA 1911
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CCACCCTGTACCGCACCATGCATCCTGTGGGCACCCCTCTGTACATGGACCCAGAATTTC 1946
consensus_12535#1 CCACCCTGTACCGCACCATGCATCCTGTGGGCACCCCTCTGTACATGGACCCAGAATTTC 1971
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TTTCCACTGGAGAGTTGACACCTCAGTCTGATGTTTATTCATTTGGTATTGTAGTCTTGC 2006
consensus_12535#1 TTTCCACTGGAGAGTTGACACCTCAGTCTGATGTTTATTCATTTGGTATTGTAGTCTTGC 2031
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 GTCTTTTAACAGGAAAGCCTCCTGTTGGTATAAAGAATATCGTGGAGGATGCAATGGAGA 2066
consensus_12535#1 GTCTTTTAACAGGAAAGCCTCCTGTTGGTATAAAGAATATCGTGGAGGATGCAATGGAGA 2091
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 AAGGTGACTTGAACTCAGTAATTGATACCTCAGTGGGAGAGTGGCCTCATCTGCACATCG 2126
consensus_12535#1 AAGGTGACTTGAACTCAGTAATTGATACCTCAGTGGGAGAGTGGCCTCATCTGCACATCG 2151
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 AGCAGCTGGCATACCTTGCTCTCAGATGCACTGAGTTAAGCAGGAGGTGCCGCCCTGATC 2186
consensus_12535#1 AGCAGCTGGCATACCTTGCTCTCAGATGCACTGAGTTAAGCAGGAGGTGCCGCCCTGATC 2211
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TTTCAGGTGAGGTGTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTT 2246
consensus_12535#1 TTTCAGGTGAGGTGTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTT 2271
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATAT 2306
consensus_12535#1 CATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATAT 2331
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CTCAGGATATCATGGATGATCCTCACATTGCAGCAGATGGATTCACCTATGAAGCTGAGG 2366
consensus_12535#1 CTCAGGATATCATGGATGATCCTCACATTGCAGCAGATGGATTCACCTATGAAGCTGAGG 2391
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CAATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTG 2426
consensus_12535#1 CAATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTG 2451
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 AACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGC 2486
consensus_12535#1 AACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGC 2511
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 AGCACAGCATGTCGCTGTAGCCAACTGCCCTCCATGTGTGAGGCAAGTGAGCAAGTGGTA 2546
consensus_12535#1 AGCACAGCATGTCGCTGTAGCCAACTGCCCTCCATGTGTGAAGCAAGTGAGCAAGTGGTA 2571
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CCAATTGGCAACTGTATAGTATTTGGGTAAATTCGGACATCCCCCCTTCTGATGCAATTT 2606
consensus_12535#1 CCAATTGGCAACTGTATAGTATTTGGGTAAATTCGGACATCCCCCCTTCTGATGCAATTT 2631
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CGGTATGCCTTCTTTATTCAGATCAGGAGAAGTAGTTGAGTGAAGGTACTCCTACCTCTT 2666
consensus_12535#1 CGGTATGCCTTCTTTATTCAGGT------ATGTATTTC-GTAGTAGCA------------ 2672
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TTATGATTTGAGGGTTGGATCCATCGTCGTCGTAAGGTAGGGGCCTCATGTACACTTGCT 2726
consensus_12535#1 -TGTAATGTAAAGGCAG-------------TGTTGGGTAAAACC----TGTTAACTTG-- 2712
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TGATCACAAGGCGACAGGTCTTCTGTTGCAAAGGAAAGGACGACGTACCTAAGCAT-TGA 2785
consensus_12535#1 -GATAGCAAGGACAAAAGCTCTATGTCG-----GTATGCCTATCACTCCTAAGGGCATCC 2766
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TGAATGATGATCGATGATGATGCTAGCTGCTTGTCCAGCTTCATGCACAGTTTTCACTAC 2845
consensus_12535#1 CATGCGTTCTTCTGCCTTTGAACTTAAT-CTTATCCAAGTTTGATTAT-GTTCATACCAG 2824
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CTGGATTTTAGCACATGTTTCCTTTTGTCGGATACCAGCATGCATGTATGGACCAGCTGG 2905
consensus_12535#1 CTTGCCAGTGCCATGAGTTTGATTGTGT---GTATCGGCCAGTTTATCTAAAATGTCAAA 2881
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 GTGCTGCAAATTGGATGATGGATTGATGGTTATTGGTTCAGGTATTCAGGAGCAGGCTGG 2965
consensus_12535#1 GAGTTAATGAGGAAAC-ATAGCTGAAAGCCTGAAACTATTTCTGTTCTCAAATGGA-TGA 2939
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 TGCCCAGTGGGCCAGTTTGATACTTGTAGGTGGACCAAAGGAGCTTTGAAGGAATTTTCA 3025
consensus_12535#1 TGTCC----------TACAATGCATGTCGTGAAACCTTTGAAATCTTATATCACTAATAT 2989
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 GCAGATGAATTCTGGGAACTTTTTTTCGATTATGATATGCCTTTTGGGCTGCACAAATGG 3085
consensus_12535#1 ATATACAGAAATGGCAGGGTTTAA---AAATGTGATA----------------------- 3023
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 GAATAGAAGAAAATCTTGTAGAAATCACTTTCTTTCCTATGCTTTTGTAGTGATTTCAGA 3145
consensus_12535#1 ------------------------------------------------------------
consensus_12535#2 ------------------------------------------------------------
consensus_12535#0 CTTGGGTTTAAAGGCTGTGTTAAGATTTATTCCAGAAGTTCATTG 3190
consensus_12535#1 ---------------------------------------------
consensus_12535#2 ---------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||