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Oryza sativa
cluster # 12541 cluster # 12541       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12541#0 length = 886 sequences # 8  
consensus_12541#1 length = 773 sequences # 1  
consensus_12541#2 length = 715 sequences # 1  

consensusID : consensus_12541#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 886
fasta sequence
                              [TTCTTGAGAAAAGCTCCAACCTTTCCTCTTCTTCCTCTTCCCCTCCCTCTCGCTGCCTGCCGCCTCTGCTTGCTCAGATCTTCTCCTCTCCTTCCCGGATTCCACCCTCAGTTGTTGTCTCACAGTCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGCTCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACGGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATCTGAACTGCGATCGGAACCTCATTTTGTTGGATGTTGTACCGTAGTGACGATCATACACCATGCAAGTGAACTTCTATCGCAGACCTCATGTAAGCATATATTTCATACAGTGCCGAAATGAAAGATCTGGCTGATAGTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU183335             [TTCTTGAGAAAAGCTCCAACCTTTCCTCTTCTTCCTCTTCCCCTCCCTCTCGCTGCCTGCCGCCTCTGCTTGCTCAGATCTTCTCCTCTCCTTCCCGGATTCCACCCTCAGTTGTTGTCTCACAGTCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGCTCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK073787             [                         CTCTTCTTCCTCTTCCCCTCCCTCTCGCTGCCTGCCGCCTCTGCTTGCTCAGATCTTCTCCTCTCCTTCCCGGATTCCACCCTCAGTTGTTGTCTCACAGTCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGCTCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACGGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATCTGAACTGCGATCGGAACCTCATTTTGTTGGATGTTGTACCGTAGTGACGATCATACACCATGCAAGTGAACTTCTATCGCAGACCTCATGTAAGCATATATTTCATACAGTGCCGAAATGAAAGATCTGGCTGATAGT                               ]
[+] EMBL AU082394             [                                                                           AGATCTTCTCCTCTCCTTCCCGGATTCCACCCTCAGTTGTTGTCTCACAGTCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGCTCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCC                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C73276               [                                                                           AGATCTTCTCCTCTCCTTCCCGGATTCCACCCTCAGTTGTTGTCTCACAGTCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGG GGCGGCGGCGGAGGCCGGAAGAGCTCGTNGCCGGCCGGGAAGCCGNGGTAGGCGGCACGGGCGGGGAGCCTGCTCGCNGGACTCCCCTCGCGGGGCAACTTCNTCGCCGACAGCATCGCGTCCAGCATGGNAGGCCTCCCGGTTTATGTNTGCCTGCACGACACCGCTCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTTTCCAGTTTAGCAAACAGAAAAATGAGGCAAAAGATTTAGGNTCAAGGACTCCAGGGGAAAGCAGNAAGGGGAAAAGG NTTTTTCCAa                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU082450             [                                                                                                       ACCCTCAGTTGTTGTCTCACAGTCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCNCCGACAGCATCGCGTCCAGCATNGGAGGCCTCCCGGTTTATGTCTGCCTNCACGACACCGCTCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTNAGCAAACAG AAAATNAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAGCAA                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU082396             [                                                                                                                                                                                                                                                                                          GCGGGGCAATTTGGTCGCCGACAGCATCGCGTCCAGCATGGAAGGCCTCCCGGTTTATGTCTGCCTGCANGACACCGNTCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATNTAAAAGAGCTAACACTGGCAGCACGGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTNTGAAAGAGAGAGGGCTNTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATNTGAACTGCGATCGGANCCTCATTTTGTTGGATGTTGTNCCGTAGTGACGATCATACNCCATGCAAGTGAACTTCTATCGCAGACCTCATGTAAGCATATATTTCATACAGTGCCGAAATGAAAGATCTGGCTGATAGTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU082451             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGACGNTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGNGAGGGCTCTCNCCNAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATCTGAACTNCGATCGGAACCTCATTTTGTTGGATGTTGTACCGTAGTGACGATCATACACCATGCAAGTGAACTTCTATCGCAGACCTCATGTAAGCATATATTTCATACAGTGCCGAAATGAAAGATCTGGCTGATAGTTTCCAAAAAA                     ]
[+] EMBL AU082395             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tnTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATNTGAACTGCGATCGGAACCTCATTTTGTTGGATGTTGTACCGTAGTGACGATCATACNCCATGCAAGTGAACTTCTATCGCAGNCCTCATGTAAGCATATATTTCATACAGTGCCGAAATGAAAGATCTGGCTGATAGTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12541#0 TTCTTGAGAAAAGCTCCAACCTTTCCTCTTCTTCCTCTTCCCCTCCCTCTCGCTGCCTGC CGCCTCTGCTTGCTCAGATCTTCTCCTCTCCTTCCCGGATTCCACCCTCAGTTGTTGTCT CACAGTCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGAT GGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGC GGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGC CGACAGCATCGCGTCCAGCATGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGC TCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCA GTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAG CAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAA CACTGGCAGCACGGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAGCA GACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTC ACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATCTGA ACTGCGATCGGAACCTCATTTTGTTGGATGTTGTACCGTAGTGACGATCATACACCATGC AAGTGAACTTCTATCGCAGACCTCATGTAAGCATATATTTCATACAGTGCCGAAATGAAA GATCTGGCTGATAGTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12541#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 773
fasta sequence
                              [AACCCTCTTCTAAATCTTCCTCTTCCCCTCCCTCTCGCTGCCTGCCGCCTCTGCTTGCTCAGATCTTCTCCTCTCCTTCCCCGATAACACCCTCAGTTGTTGTCTCACAATCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGTGCGTTCGTTCCCCCCCACCCCTAAAATGGACCAGCCTTTTTCTTGGCATGTTAGAAGGGTTCTTGTGAAAAGCCCTCTGATTTTTATGATTTTTTATTATTATTTTTTGCGCAGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGCTCCTCCAGGTTTGTTTGTGATTTTCTAGGATAATCAAGCTTTACTTTTATTATTGTGATGATGCTAATTTGTTGTTTTACGAATGAGGGCTGATTGTAGTGCTAGTGGTGTGTACTGTGGAGAGACAGATTTGAAGTAGAAGGATGATCCTTTCTACTAGGGTTTTATGTAGAATTTTCCTTGTAAGAACGCAGTCATCTTGCCTAGGTTTTGTTCTTTCGATTGGCAATGCTGTTGGCATCATGCTTAATTTGCGGTTACTGAATTTGTTTTGCTGATGTTAAGAGTTGGAATTTCTATGGGTTTACTCAG]

[+] EMBL CB650237             [AACCCTCTTCTAAATCTTCCTCTTCCCCTCCCTCTCGCTGCCTGCCGCCTCTGCTTGCTCAGATCTTCTCCTCTCCTTCCCCGATAACACCCTCAGTTGTTGTCTCACAATCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGTGCGTTCGTTCCCCCCCACCCCTAAAATGGACCAGCCTTTTTCTTGGCATGTTAGAAGGGTTCTTGTGAAAAGCCCTCTGATTTTTATGATTTTTTATTATTATTTTTTGCGCAGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGCTCCTCCAGGTTTGTTTGTGATTTTCTAGGATAATCAAGCTTTACTTTTATTATTGTGATGATGCTAATTTGTTGTTTTACGAATGAGGGCTGATTGTAGTGCTAGTGGTGTGTACTGTGGAGAGACAGATTTGAAGTAGAAGGATGATCCTTTCTACTAGGGTTTTATGTAGAATTTTCCTTGTAAGAACGCAGTCATCTTGCCTAGGTTTTGTTCTTTCGATTGGCAATGCTGTTGGCATCATGCTTAATTTGCGGTTACTGAATTTGTTTTGCTGATGTTAAGAGTTGGAATTTCTATGGGTTTACTCAG]


>consensus_12541#1 AACCCTCTTCTAAATCTTCCTCTTCCCCTCCCTCTCGCTGCCTGCCGCCTCTGCTTGCTC AGATCTTCTCCTCTCCTTCCCCGATAACACCCTCAGTTGTTGTCTCACAATCTCCGAATC GCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGGCGG CGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGC GGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTC CAGCATGGTGCGTTCGTTCCCCCCCACCCCTAAAATGGACCAGCCTTTTTCTTGGCATGT TAGAAGGGTTCTTGTGAAAAGCCCTCTGATTTTTATGATTTTTTATTATTATTTTTTGCG CAGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGCTCCTCCAGGTTTGTTTGTG ATTTTCTAGGATAATCAAGCTTTACTTTTATTATTGTGATGATGCTAATTTGTTGTTTTA CGAATGAGGGCTGATTGTAGTGCTAGTGGTGTGTACTGTGGAGAGACAGATTTGAAGTAG AAGGATGATCCTTTCTACTAGGGTTTTATGTAGAATTTTCCTTGTAAGAACGCAGTCATC TTGCCTAGGTTTTGTTCTTTCGATTGGCAATGCTGTTGGCATCATGCTTAATTTGCGGTT ACTGAATTTGTTTTGCTGATGTTAAGAGTTGGAATTTCTATGGGTTTACTCAG



consensusID : consensus_12541#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 715
fasta sequence
                              [TGTCTCTTGGGAGTCTTATCTCTTGAATATCATTTTTGGACGTATATGATTTACATTTTATAGTGGCAGTTGTTAGTATATGATCTATTGTCAGACCATGATCTTTTACATATTTTCATTACTTATGTTCTTATGATAAAGCTGATTATTGATGACACAAACAGATCATTTTAAGGCTGTTTTGTTCTGTTCATTGACTGATCACCGTTTTTGTCATTTTAGAGGGACAAGTTATAGACACAGACCCCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAATCAGAAAAATGAGGCAAAAGATGTAGGATCAAGGCCTCCAGGAGAAAGCAGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACGGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATCTGATCTGCGATCGGAACCTCATTTTGTTGGATGTTGTCCCGTAGTGACGATCATACACCATGCAAGTGAACTTCTATCGCAGACCTCATGTAAGCATATATTTCATACAGGTGCCGAAATGAAAGATCTGGCTGATAGTTTCCA]

[-] EMBL CB650238             [TGTCTCTTGGGAGTCTTATCTCTTGAATATCATTTTTGGACGTATATGATTTACATTTTATAGTGGCAGTTGTTAGTATATGATCTATTGTCAGACCATGATCTTTTACATATTTTCATTACTTATGTTCTTATGATAAAGCTGATTATTGATGACACAAACAGATCATTTTAAGGCTGTTTTGTTCTGTTCATTGACTGATCACCGTTTTTGTCATTTTAGAGGGACAAGTTATAGACACAGACCCCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAATCAGAAAAATGAGGCAAAAGATGTAGGATCAAGGCCTCCAGGAGAAAGCAGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACGGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATCTGATCTGCGATCGGAACCTCATTTTGTTGGATGTTGTCCCGTAGTGACGATCATACACCATGCAAGTGAACTTCTATCGCAGACCTCATGTAAGCATATATTTCATACAGGTGCCGAAATGAAAGATCTGGCTGATAGTTTCCA]


>consensus_12541#2 TGTCTCTTGGGAGTCTTATCTCTTGAATATCATTTTTGGACGTATATGATTTACATTTTA TAGTGGCAGTTGTTAGTATATGATCTATTGTCAGACCATGATCTTTTACATATTTTCATT ACTTATGTTCTTATGATAAAGCTGATTATTGATGACACAAACAGATCATTTTAAGGCTGT TTTGTTCTGTTCATTGACTGATCACCGTTTTTGTCATTTTAGAGGGACAAGTTATAGACA CAGACCCCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAATCAGAAAAATGAGGCAA AAGATGTAGGATCAAGGCCTCCAGGAGAAAGCAGCAAGGGGAAAAGGTCTGCTTCCAGAC TTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACGGCAGGGTCATCTG CCCATGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGA AGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGGATGAACTGA TCGCCCGCTTAATTGAGTCCTCGGAGTGATCTGATCTGCGATCGGAACCTCATTTTGTTG GATGTTGTCCCGTAGTGACGATCATACACCATGCAAGTGAACTTCTATCGCAGACCTCAT GTAAGCATATATTTCATACAGGTGCCGAAATGAAAGATCTGGCTGATAGTTTCCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12541#0      TTCTTGAGAAAAGCTCCAACCTTTCCTCTTCTTCCTCTTCCCCTCCCTCTCGCTGCCTGC 60
consensus_12541#2      ------------------------------------------------------------
consensus_12541#1      ---------------AACCCTCTTCTAAATCTTCCTCTTCCCCTCCCTCTCGCTGCCTGC 45
                                                                                   

consensus_12541#0      CGCCTCTGCTTGCTCAGATCTTCTCCTCTCCTTCCCGGATTCCACCCTCAGTTGTTGTCT 120
consensus_12541#2      ------------------------------------------------------------
consensus_12541#1      CGCCTCTGCTTGCTCAGATCTTCTCCTCTCCTTCCCCGATAACACCCTCAGTTGTTGTCT 105
                                                                                   

consensus_12541#0      CACAGTCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGAT 180
consensus_12541#2      ---------TGTCTC-TTGGGAGTCTTATCTCTTGAATATCATTTTTGGACGTATATGAT 50
consensus_12541#1      CACAATCTCCGAATCGCTGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGAT 165
                                 *  **  **** *    * *  ***    ***     ** *      ***

consensus_12541#0      GGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGC 240
consensus_12541#2      TTACATT--TTATAGTGGCAGTTGTTAGTATATGATCT-ATTGTCAGACCATGATCTTTT 107
consensus_12541#1      GGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGC 225
                          *     *    * *** *  *       * ** **  * * * * *    * *    

consensus_12541#0      GGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGC 300
consensus_12541#2      ACA-----TATTTTCATTACTTATGTTCTTATGATAAA----GCTGATTATTGATGACAC 158
consensus_12541#1      GGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGC 285
                         *      *    *        ** **    **        ** *   *     * * *

consensus_12541#0      CGACAGCATCGCGTCCAGCATGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGC 360
consensus_12541#2      AAACAG-ATCATTTTAAGGCTGTTTTG--TTCTGTTCATTGACTGATCAC-CGTTTTTGT 214
consensus_12541#1      CGACAGCATCGCGTCCAGCATGGTGCGT-TCGTTCCCCCCCACCCCTAAAATGGACCAGC 344
                         **** ***   *  **  **    *  *            *         *     * 

consensus_12541#0      TCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATC---AGATCTCT 417
consensus_12541#2      CATTTTAGAGGGACAAGTTATAGACACAGACCCCACAAACATTTTAATC---AGATCTCT 271
consensus_12541#1      CTTTTTCTTGG--CATGTTAGAAGGGTTCTTGTGAAAAGCCCTCTGATTTTTATGATTTT 402
                          *     **  ** **** *            * ** *  * * **    *    * *

consensus_12541#0      CCAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAG 477
consensus_12541#2      CCAGTTGAGCAATCAGAAAAATGAGGCAAAAGATGTAGGATCAAGGCCTCCAGGAGAAAG 331
consensus_12541#1      TTATTATTATTTTTTGCGCAGGGAGGC-----CTCCCGGTTTATGTCTGCCTGCACGACA 457
                         * *          *   *  *****      *   ** * * *    ** * *  *  

consensus_12541#0      CAGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGC 537
consensus_12541#2      CAGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGC 391
consensus_12541#1      CCGCTCCTCCA---GGTTTGTTTGTGATTTTCTAGG-----ATAATCAAGCTTTA----C 505
                       * **      *   *** ** **      ** ***      * **** * **  *    *

consensus_12541#0      TAACACTGGCAGCACGGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGA 597
consensus_12541#2      TAACACTGGCAGCACGGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGA 451
consensus_12541#1      TTTTATTATTGTGATGAT--GCTAATTTGTTGTTTTACGAATGAGGGCTGATTGT----- 558
                       *   * *      * *    * * ** **    *     * ** *  *** ** *     

consensus_12541#0      GCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCT 657
consensus_12541#2      GCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCT 511
consensus_12541#1      ---AGTGCTAGTGGTGTGTACTGTGGAGAGACAGA-----TTTGAAGTAGAAGGATGATC 610
                             ***       * *** *******    *       **     ***  ** *   

consensus_12541#0      CTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATC 717
consensus_12541#2      CTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATC 571
consensus_12541#1      CTTTCTACTAGGGTTTTATGTAGAATT----------TTCCTTGTAAGAACGCAGTCATC 660
                       **  * *  ***     * *  *** *          **  ***      ** *** ***

consensus_12541#0      TGAACTGCGATCGGAACCTCATTTTGTTGGATGTTGTACCGTAGTGACGATCATACACCA 777
consensus_12541#2      TGATCTGCGATCGGAACCTCATTTTGTTGGATGTTGTCCCGTAGTGACGATCATACACCA 631
consensus_12541#1      TTGCCTAGGTTTTG---TTCTTTCGATTGGCAATGCTGTTGGCATCATGCTTA-ATTTGC 716
                       *   **  * *  *    ** **   ****   *  *   *   * * * * * *     

consensus_12541#0      TGCAAGTGAACTTCTATCGCAGACCTCATGTAAGCATATATTTCATACAG-TGCCGAAAT 836
consensus_12541#2      TGCAAGTGAACTTCTATCGCAGACCTCATGTAAGCATATATTTCATACAGGTGCCGAAAT 691
consensus_12541#1      GGTTACTGAATTTGTTTTGCTGATGTTAAG-AGTTGGAATTTCTATGGGTTTACTCAG-- 773
                        *  * **** ** * * ** **  * * * *     *  **  **     * *  *   

consensus_12541#0      GAAAGATCTGGCTGATAGTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA 886
consensus_12541#2      GAAAGATCTGGCTGATAGTTTCCA-------------------------- 715
consensus_12541#1      --------------------------------------------------
                                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)