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Oryza sativa
cluster # 12551 cluster # 12551       Sequences # 10       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12551#0 length = 2045 sequences # 1  
consensus_12551#1 length = 968 sequences # 5  
consensus_12551#2 length = 961 sequences # 1  
consensus_12551#3 length = 762 sequences # 1  
consensus_12551#4 length = 465 sequences # 1  
consensus_12551#5 length = 270 sequences # 1  

consensusID : consensus_12551#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2045
fasta sequence
                              [CCTTCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGCGGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCCGCAGGGGGTGACGGAGCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGTATAGGTAGAGATAGCTCCAGCTAAGCTAAGCCTCGCGACGCGCGTTCCCCCTCCCTTCTCTTCTCCTCCTCGGGGTGTCGAGGCGACCGCCTGCCGCGCAGTGTGCTCGGTGAGGCGGATCGGGGGGGGGGGGGGGGTCGCTTCCTCGCGTGGTGGTGGTGCGCGCGCGCATGTGGATCGGCGAGATGGGGACGGCGTCTCCCGTGTGCGGCGCTTGATGGGAGGTTCGATCCACCGGCGGCGTCGTCTTGCGTTGGATCTATCATCTATGTTTGTGTCGCTGTGATCTATCTCCGCGAGTTCCTCGGGAATTTAGGATTGCAGCTGACCTGATGGGATGGGAGGTCGCGCTAGCTAGTAGGTGAAACATTAGGATTTCACATTACGATTTTATTAGGATTTCATTTTTAGGATTTTAGGATTTCAGGGTTTTGGATTTCACATTACGATTTTATTAGGATTTTAGGATTTCAGGGTTTTGGAGTTATTAGGATTTCACATTAGGATTTTAGGATTTCAGGGTTTTGGAGTGGCGTTGAAGGGATCATGAGTGGCTCCGTCGCGCAGCGCTTGTCAGTGCTACCTACCTGTTTGCAGAGTTGCTTAGGTAATGGCCTTGGAGTGTGCATACCTGTTGTTTTGGTTGTTTAGCGACTCGGCTTGGCCGCTCCAGAGGTCTGGAAGCTGCTGTGCTGTATGACTGATTGATTTCATTGATTTCTTTGATTACTCATGGTTTGTTGATCATGCCCTTTGGTACGCTAGTTGTTGGTGCCTGCGTTTTTCTGTTGATTATGGATGATAGCCGGATTTCCTGTTAAAGACATGTTGTTCGGTAAAATTGCTGGTTCTGCGGTTACAGCTTGTGCATCATGCTTGATCTGGGAAAGGCTATTCCTTTCTTGGGATCTTGAACCCTCAACACAAGCATGTCAATCAATGTGATTGTCCCCCATGATTCGGATGCGAACAACTCTCACGTTGACCAGTAATCCCATTTAGTCTCGTTTCAAGAATTATGGGGTTACTAATATTTCAAATAATGCTAATTCCAGGTAGTTGTGCTAGTGCAGTTGGCAGGGGCAGCCGTCGTCCGCCCCGCCAGCTTGCGTTTGACTCCCAAGCGTGCTCACATCCGTTGTTAATTAATCGATACCAAGCTCCTTCTTAGTTATCCTATGTTTTCTACCTTCAAATAAGGAATGCAACGTGTCATTGTAGATGTAGAATTTTAGGGGATGTAGACCTAGACATCTGTTGGTCTAGGTCAGTTATTCTAATGATAAAGGTTTTTAAGGTGCACCACCTTGTATGGAGACCATTTGTTCGTTTTGATGTAACGGCTATCATGAATCTTAACTGTACCTTCAAGGATCTAAGAGACCATCTATAACCTTTTAAAGGATAATGATATCTTTAAACATTGTCAAATTTCATTACTGATAGATAAAAAGAAAATAAGATAGTATTTGAAAGGAAAGGGATTAAAATACAATTAATTCCATCCTTTATTGTCAAACGATTTGCCATTTTCCTTGCTAAAAGAAAAACTTCCTTCAGTAATTTTTGTTGGCACTGAGAAATGCAAATCTTGTTCTGGAATACAAACATTTAATAATCAGTAGTACACTAGGTTACACAAAAGAATTGACTTCTGAGACTTTCATCTTGTGAAATTGATAGTTAATTTAGCTTTTTATTTTTTGGGGTGTTTTCTATTCATCAACGACTTGAGAATTGCTAGATCCCAATCAACTTTCTTTTTTCATTCTTCTTATTTACTTGCACTTGAAACAGAAAATTACATTAGAAACAACATTA]

[+] EMBL AK100001             [CCTTCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGCGGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCCGCAGGGGGTGACGGAGCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGTATAGGTAGAGATAGCTCCAGCTAAGCTAAGCCTCGCGACGCGCGTTCCCCCTCCCTTCTCTTCTCCTCCTCGGGGTGTCGAGGCGACCGCCTGCCGCGCAGTGTGCTCGGTGAGGCGGATCGGGGGGGGGGGGGGGGTCGCTTCCTCGCGTGGTGGTGGTGCGCGCGCGCATGTGGATCGGCGAGATGGGGACGGCGTCTCCCGTGTGCGGCGCTTGATGGGAGGTTCGATCCACCGGCGGCGTCGTCTTGCGTTGGATCTATCATCTATGTTTGTGTCGCTGTGATCTATCTCCGCGAGTTCCTCGGGAATTTAGGATTGCAGCTGACCTGATGGGATGGGAGGTCGCGCTAGCTAGTAGGTGAAACATTAGGATTTCACATTACGATTTTATTAGGATTTCATTTTTAGGATTTTAGGATTTCAGGGTTTTGGATTTCACATTACGATTTTATTAGGATTTTAGGATTTCAGGGTTTTGGAGTTATTAGGATTTCACATTAGGATTTTAGGATTTCAGGGTTTTGGAGTGGCGTTGAAGGGATCATGAGTGGCTCCGTCGCGCAGCGCTTGTCAGTGCTACCTACCTGTTTGCAGAGTTGCTTAGGTAATGGCCTTGGAGTGTGCATACCTGTTGTTTTGGTTGTTTAGCGACTCGGCTTGGCCGCTCCAGAGGTCTGGAAGCTGCTGTGCTGTATGACTGATTGATTTCATTGATTTCTTTGATTACTCATGGTTTGTTGATCATGCCCTTTGGTACGCTAGTTGTTGGTGCCTGCGTTTTTCTGTTGATTATGGATGATAGCCGGATTTCCTGTTAAAGACATGTTGTTCGGTAAAATTGCTGGTTCTGCGGTTACAGCTTGTGCATCATGCTTGATCTGGGAAAGGCTATTCCTTTCTTGGGATCTTGAACCCTCAACACAAGCATGTCAATCAATGTGATTGTCCCCCATGATTCGGATGCGAACAACTCTCACGTTGACCAGTAATCCCATTTAGTCTCGTTTCAAGAATTATGGGGTTACTAATATTTCAAATAATGCTAATTCCAGGTAGTTGTGCTAGTGCAGTTGGCAGGGGCAGCCGTCGTCCGCCCCGCCAGCTTGCGTTTGACTCCCAAGCGTGCTCACATCCGTTGTTAATTAATCGATACCAAGCTCCTTCTTAGTTATCCTATGTTTTCTACCTTCAAATAAGGAATGCAACGTGTCATTGTAGATGTAGAATTTTAGGGGATGTAGACCTAGACATCTGTTGGTCTAGGTCAGTTATTCTAATGATAAAGGTTTTTAAGGTGCACCACCTTGTATGGAGACCATTTGTTCGTTTTGATGTAACGGCTATCATGAATCTTAACTGTACCTTCAAGGATCTAAGAGACCATCTATAACCTTTTAAAGGATAATGATATCTTTAAACATTGTCAAATTTCATTACTGATAGATAAAAAGAAAATAAGATAGTATTTGAAAGGAAAGGGATTAAAATACAATTAATTCCATCCTTTATTGTCAAACGATTTGCCATTTTCCTTGCTAAAAGAAAAACTTCCTTCAGTAATTTTTGTTGGCACTGAGAAATGCAAATCTTGTTCTGGAATACAAACATTTAATAATCAGTAGTACACTAGGTTACACAAAAGAATTGACTTCTGAGACTTTCATCTTGTGAAATTGATAGTTAATTTAGCTTTTTATTTTTTGGGGTGTTTTCTATTCATCAACGACTTGAGAATTGCTAGATCCCAATCAACTTTCTTTTTTCATTCTTCTTATTTACTTGCACTTGAAACAGAAAATTACATTAGAAACAACATTA]


>consensus_12551#0 CCTTCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGC GGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCCGCAGGGGGTGACGGA GCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGC CGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGTATAGGTAGAGATAGCT CCAGCTAAGCTAAGCCTCGCGACGCGCGTTCCCCCTCCCTTCTCTTCTCCTCCTCGGGGT GTCGAGGCGACCGCCTGCCGCGCAGTGTGCTCGGTGAGGCGGATCGGGGGGGGGGGGGGG GTCGCTTCCTCGCGTGGTGGTGGTGCGCGCGCGCATGTGGATCGGCGAGATGGGGACGGC GTCTCCCGTGTGCGGCGCTTGATGGGAGGTTCGATCCACCGGCGGCGTCGTCTTGCGTTG GATCTATCATCTATGTTTGTGTCGCTGTGATCTATCTCCGCGAGTTCCTCGGGAATTTAG GATTGCAGCTGACCTGATGGGATGGGAGGTCGCGCTAGCTAGTAGGTGAAACATTAGGAT TTCACATTACGATTTTATTAGGATTTCATTTTTAGGATTTTAGGATTTCAGGGTTTTGGA TTTCACATTACGATTTTATTAGGATTTTAGGATTTCAGGGTTTTGGAGTTATTAGGATTT CACATTAGGATTTTAGGATTTCAGGGTTTTGGAGTGGCGTTGAAGGGATCATGAGTGGCT CCGTCGCGCAGCGCTTGTCAGTGCTACCTACCTGTTTGCAGAGTTGCTTAGGTAATGGCC TTGGAGTGTGCATACCTGTTGTTTTGGTTGTTTAGCGACTCGGCTTGGCCGCTCCAGAGG TCTGGAAGCTGCTGTGCTGTATGACTGATTGATTTCATTGATTTCTTTGATTACTCATGG TTTGTTGATCATGCCCTTTGGTACGCTAGTTGTTGGTGCCTGCGTTTTTCTGTTGATTAT GGATGATAGCCGGATTTCCTGTTAAAGACATGTTGTTCGGTAAAATTGCTGGTTCTGCGG TTACAGCTTGTGCATCATGCTTGATCTGGGAAAGGCTATTCCTTTCTTGGGATCTTGAAC CCTCAACACAAGCATGTCAATCAATGTGATTGTCCCCCATGATTCGGATGCGAACAACTC TCACGTTGACCAGTAATCCCATTTAGTCTCGTTTCAAGAATTATGGGGTTACTAATATTT CAAATAATGCTAATTCCAGGTAGTTGTGCTAGTGCAGTTGGCAGGGGCAGCCGTCGTCCG CCCCGCCAGCTTGCGTTTGACTCCCAAGCGTGCTCACATCCGTTGTTAATTAATCGATAC CAAGCTCCTTCTTAGTTATCCTATGTTTTCTACCTTCAAATAAGGAATGCAACGTGTCAT TGTAGATGTAGAATTTTAGGGGATGTAGACCTAGACATCTGTTGGTCTAGGTCAGTTATT CTAATGATAAAGGTTTTTAAGGTGCACCACCTTGTATGGAGACCATTTGTTCGTTTTGAT GTAACGGCTATCATGAATCTTAACTGTACCTTCAAGGATCTAAGAGACCATCTATAACCT TTTAAAGGATAATGATATCTTTAAACATTGTCAAATTTCATTACTGATAGATAAAAAGAA AATAAGATAGTATTTGAAAGGAAAGGGATTAAAATACAATTAATTCCATCCTTTATTGTC AAACGATTTGCCATTTTCCTTGCTAAAAGAAAAACTTCCTTCAGTAATTTTTGTTGGCAC TGAGAAATGCAAATCTTGTTCTGGAATACAAACATTTAATAATCAGTAGTACACTAGGTT ACACAAAAGAATTGACTTCTGAGACTTTCATCTTGTGAAATTGATAGTTAATTTAGCTTT TTATTTTTTGGGGTGTTTTCTATTCATCAACGACTTGAGAATTGCTAGATCCCAATCAAC TTTCTTTTTTCATTCTTCTTATTTACTTGCACTTGAAACAGAAAATTACATTAGAAACAA CATTA



consensusID : consensus_12551#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 968
fasta sequence
                              [CCTTCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGCGGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCCGCAGGGGGTGACGGAGCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGCTGCAGCAGTACAAAATAGTGGAGATGAAACTTCTAGCACAACAGAGAGATCTTCAGGCAAAAATTCCTGATATAGAGAAGTGCTTGGATATTGTTGCAACTTTACAAGCTAAAAAAGCTTT-GGGTGAGGCACTCACAGCCGA-TTTTGAATTATC-TGA-GGGAATC-TACTCCCGTGCGAAAATCGAGGACACCGATTCTGTGTGCCTATGGTTGGGTGCAAATGTAATGCTGGAGTACTCCTGCGACGAGGCCAACGCCCTCTTGAAAAAGAATCTGGAAAACGCCAAGGCCAGTTTAGAAGTCCTTGTTGCTGATCTCCAGTTCTTGCGGGACCAACAAACGATCACTCAGGTTACAATTGCTCGGGTGTTCAACTGGGACGTGCACCAACGGAGAAGCAAGCAAGCTATCAAAGAAACCTGATCATCATACCCGCAGATTCTACCAGCCAAAATGAGATCGCGACATTTTTGTACTTCTTGCCACCTCTGGCAGTCTAGGCCATCGTAGCATGTGCCCTCTGTTGGCGCCTTGCCGTGTAACAGTGTATCAGGTTTTATGGTGTTGGATTGTTGGAACTCTGTTTGCCTTGCAAGTAGAAATTGGTGTTTGTTTTCACTTCGGTTCGCGTGATGGAACATATTTTGAGGAGTAAAAATCTTAGCGGTTTTCAGAGAGAAACCTTTGCAATGCGTGTCATGTTTTGGGTTTGCANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071387             [CCTTCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGCGGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCCGCAGGGGGTGACGGAGCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGCTGCAGCAGTACAAAATAGTGGAGATGAAACTTCTAGCACAACAGAGAGATCTTCAGGCAAAAATTCCTGATATAGAGAAGTGCTTGGATATTGTTGCAACTTTACAAGCTAAAAAAGCTTT GGGTGAGGCACTCACAGCCGA TTTTGAATTATC TGA GGGAATC TACTCCCGTGCGAAAATCGAGGACACCGATTCTGTGTGCCTATGGTTGGGTGCAAATGTAATGCTGGAGTACTCCTGCGACGAGGCCAACGCCCTCTTGAAAAAGAATCTGGAAAACGCCAAGGCCAGTTTAGAAGTCCTTGTTGCTGATCTCCAGTTCTTGCGGGACCAACAAACGATCACTCAGGTTACAATTGCTCGGGTGTTCAACTGGGACGTGCACCAACGGAGAAGCAAGCAAGCTATCAAAGAAACCTGATCATCATACCCGCAGATTCTACCAGCCAAAATGAGATCGCGACATTTTTGTACTTCTTGCCACCTCTGGCAGTCTAGGCCATCGTAGCATGTGCCCTCTGTTGGCGCCTTGCCGTGTAACAGTGTATCAGGTTTTATGGTGTTGGATTGTTGGAACTCTGTTTGCCTTGCAAGTAGAAATTGGTGTTTGTTTTCACTTCGGTTCGCGTGATGGAACATATTTTGAGGAGTAAAAATCTTAG                                                                                 ]
[+] EMBL AK059971             [ CTTCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGCGGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCCGCAGGGGGTGACGGAGCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGCTGCAGCAGTACAAAATAGTGGAGATGAAACTTCTAGCACAACAGAGAGATCTTCAGGCAAAAATTCCTGATATAGAGAAGTGCTTGGATATTGTTGCAACTTTACAAGCTAAAAAAGCTTT GGGTGAGGCACTCACAGCCGA TTTTGAATTATC TGA GGGAATC TACTCCCGTGCGAAAATCGAGGACACCGATTCTGTGTGCCTATGGTTGGGTGCAAATGTAATGCTGGAGTACTCCTGCGACGAGGCCAACGCCCTCTTGAAAAAGAATCTGGAAAACGCCAAGGCCAGTTTAGAAGTCCTTGTTGCTGATCTCCAGTTCTTGCGGGACCAACAAACGATCACTCAGGTTACAATTGCTCGGGTGTTCAACTGGGACGTGCACCAACGGAGAAGCAAGCAAGCTATCAAAGAAACCTGATCATCATACCCGCAGATTCTACCAGCCAAAATGAGATCGCGACATTTTTGTACTTCTTGCCACCTCTGGCAGTCTAGGCCATCGTAGCATGTGCCCTCTGTTGGCGCCTTGCCGTGTAACAGTGTATCAGGTTTTATGGTGTTGGATTGTTGGAACTCTGTTTGCCTTGCAAGTAGAAATTGGTGTTTGTTTTCACTTCGGTTCGCGTGATGGAACATATTTTGAGGAGTAAAAATCTTAG                                                                                 ]
[+] EMBL OSS15568A            [           CTCCTCCTCCTCCNNCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGCGGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCAAGGNGGGGTGACGGAGCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGACAACTCCGGCCTCGCCTTCCTCCAGGAAAGGCTGCAGCAGTACAAAATAGTGGAGATGAAACTTCTAGCACAACAGAGAGATCTTCAGGCAAAAATTCCTGATATAGAGAAGTGCTTGGATATTGTTGCAACTTTACAAGCTAAAAAAGCTTTGGGGTGAGGCACTCACAGCCGATTTTTNAATTATCTTGAGGGGAATCTTACTTCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU069266             [                                               aATTTNTNATGGCGGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCAAGTGGANGTGACGGAGCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGTCAACTCCGGCCTCGCNTTCCTCCAGGAAAGGCTGCAGCAGTACAAAATAGTGGAGATGAAACTTCTAGCACAACAGAGAGATCTTCAGGCAAAANTTCCTGATATAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF327627             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCGACATTTTTGTACTTCTTGCCACCTCTGGCAGTCTAGGCCATCGTAGCATGTGCCCTCTGTTGGCGCCTTGCCGTGTAACAGTGTATCAGGTTTTACGGTGTTGGATTGTTGGAACTCTGTTTGCCTTGCAAGTAGAAATTGGTGTTTGTTTTCACTTCGGTTCGCGTGATGGAACATATTTTGAGGAGTAAAAATCTTAGCGGTTTTCAGAGAGAAACCTTTGCAATGCGTGTCATGTTTTGGGTTTGCANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12551#1 CCTTCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGC GGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCCGCAGGGGGTGACGGA GCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGC CGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGCTGCAGCAGTACAAAAT AGTGGAGATGAAACTTCTAGCACAACAGAGAGATCTTCAGGCAAAAATTCCTGATATAGA GAAGTGCTTGGATATTGTTGCAACTTTACAAGCTAAAAAAGCTTTGGGTGAGGCACTCAC AGCCGATTTTGAATTATCTGAGGGAATCTACTCCCGTGCGAAAATCGAGGACACCGATTC TGTGTGCCTATGGTTGGGTGCAAATGTAATGCTGGAGTACTCCTGCGACGAGGCCAACGC CCTCTTGAAAAAGAATCTGGAAAACGCCAAGGCCAGTTTAGAAGTCCTTGTTGCTGATCT CCAGTTCTTGCGGGACCAACAAACGATCACTCAGGTTACAATTGCTCGGGTGTTCAACTG GGACGTGCACCAACGGAGAAGCAAGCAAGCTATCAAAGAAACCTGATCATCATACCCGCA GATTCTACCAGCCAAAATGAGATCGCGACATTTTTGTACTTCTTGCCACCTCTGGCAGTC TAGGCCATCGTAGCATGTGCCCTCTGTTGGCGCCTTGCCGTGTAACAGTGTATCAGGTTT TATGGTGTTGGATTGTTGGAACTCTGTTTGCCTTGCAAGTAGAAATTGGTGTTTGTTTTC ACTTCGGTTCGCGTGATGGAACATATTTTGAGGAGTAAAAATCTTAGCGGTTTTCAGAGA GAAACCTTTGCAATGCGTGTCATGTTTTGGGTTTGCANAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA



consensusID : consensus_12551#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 961
fasta sequence
                              [TCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGCGGCGGCGGCGGCCTCCTCGTCGGCGGAGGCGGCGACGCCGCAGGGGGTGACGGAGCGGCGGGGAATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGCTGCAGCAGTACAAAATAGTGGAGATGAAACTTCTTGCACAACAGAGAGATCTTCAGGCAAAAATTCCTGATATAGAGAAGTGCTTGGATATTGTTGCAACTTTACAAGCTAAAAAAGCTTTGGGTGAGGAGCTCACAGCCGATTTTGAATTATCTGAGGGAATCTACTCCCGTGCGAAAATCGAGGACACCGATTCTGTGTGCCTATGGTTGGGTGCAAATGTAATGCTGGAGTACTCCTGCGACGAGGCCAACGCCCTCTTGAAAAAGAATCTGGAAAACGCCCAGGCCAGTTTAGAAGTCCTTGTTGCTGATCTCCAGGTCTTTGCGGACCAACAAACGATCACTCAGGTTACAATTGCTTGGGTGTTCAACTGGGACGTGCACCAACCGGAGAACAAGCCAGCTTTCAAGAAAACTGGTCATTATACCCGCAGATTCTTACCAGCCAAATGGAAACGCGACTTTTTTGGCCTTTTGCCACCACTGGGCGGTTAAGCCATCGTATCATTTGCCCTCTGTTGGGCCCTTGCTTTAACAGTGTATAAGGTTTATGGGGTTTGATTGTTGGAACCCTGTTGGCCTTGCATGCCGGGAAAAATGGGGGTGGTTTAACTTCGGCCGCTTGATGGAACAATTTTTGGGGGGTAAAAATTTTTTAGAAAACAAATCCGTTTACAATTTATCTCTTATGAGAATGTGCCTCAATGTTGCTGCTTATTTATGTATGTCCACTATACTCTCCTGTGGGGGGGCGCGGCTCCCATT]

[+] EMBL BE040150             [TCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGCGGCGGCGGCGGCCTCCTCGTCGGCGGAGGCGGCGACGCCGCAGGGGGTGACGGAGCGGCGGGGAATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGCTGCAGCAGTACAAAATAGTGGAGATGAAACTTCTTGCACAACAGAGAGATCTTCAGGCAAAAATTCCTGATATAGAGAAGTGCTTGGATATTGTTGCAACTTTACAAGCTAAAAAAGCTTTGGGTGAGGAGCTCACAGCCGATTTTGAATTATCTGAGGGAATCTACTCCCGTGCGAAAATCGAGGACACCGATTCTGTGTGCCTATGGTTGGGTGCAAATGTAATGCTGGAGTACTCCTGCGACGAGGCCAACGCCCTCTTGAAAAAGAATCTGGAAAACGCCCAGGCCAGTTTAGAAGTCCTTGTTGCTGATCTCCAGGTCTTTGCGGACCAACAAACGATCACTCAGGTTACAATTGCTTGGGTGTTCAACTGGGACGTGCACCAACCGGAGAACAAGCCAGCTTTCAAGAAAACTGGTCATTATACCCGCAGATTCTTACCAGCCAAATGGAAACGCGACTTTTTTGGCCTTTTGCCACCACTGGGCGGTTAAGCCATCGTATCATTTGCCCTCTGTTGGGCCCTTGCTTTAACAGTGTATAAGGTTTATGGGGTTTGATTGTTGGAACCCTGTTGGCCTTGCATGCCGGGAAAAATGGGGGTGGTTTAACTTCGGCCGCTTGATGGAACAATTTTTGGGGGGTAAAAATTTTTTAGAAAACAAATCCGTTTACAATTTATCTCTTATGAGAATGTGCCTCAATGTTGCTGCTTATTTATGTATGTCCACTATACTCTCCTGTGGGGGGGCGCGGCTCCCATT]


>consensus_12551#2 TCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGCGGCGGCGGCGGCCTCCTCGTCGGC GGAGGCGGCGACGCCGCAGGGGGTGACGGAGCGGCGGGGAATCCCGGCGGCGTCCTTCGT CGAGGACGTCGAGACCTACCTCCGCCAGGCCGGGCTCGACGTCAACTCCGGCCTCGCCTT CCTCCAGGAAAGGCTGCAGCAGTACAAAATAGTGGAGATGAAACTTCTTGCACAACAGAG AGATCTTCAGGCAAAAATTCCTGATATAGAGAAGTGCTTGGATATTGTTGCAACTTTACA AGCTAAAAAAGCTTTGGGTGAGGAGCTCACAGCCGATTTTGAATTATCTGAGGGAATCTA CTCCCGTGCGAAAATCGAGGACACCGATTCTGTGTGCCTATGGTTGGGTGCAAATGTAAT GCTGGAGTACTCCTGCGACGAGGCCAACGCCCTCTTGAAAAAGAATCTGGAAAACGCCCA GGCCAGTTTAGAAGTCCTTGTTGCTGATCTCCAGGTCTTTGCGGACCAACAAACGATCAC TCAGGTTACAATTGCTTGGGTGTTCAACTGGGACGTGCACCAACCGGAGAACAAGCCAGC TTTCAAGAAAACTGGTCATTATACCCGCAGATTCTTACCAGCCAAATGGAAACGCGACTT TTTTGGCCTTTTGCCACCACTGGGCGGTTAAGCCATCGTATCATTTGCCCTCTGTTGGGC CCTTGCTTTAACAGTGTATAAGGTTTATGGGGTTTGATTGTTGGAACCCTGTTGGCCTTG CATGCCGGGAAAAATGGGGGTGGTTTAACTTCGGCCGCTTGATGGAACAATTTTTGGGGG GTAAAAATTTTTTAGAAAACAAATCCGTTTACAATTTATCTCTTATGAGAATGTGCCTCA ATGTTGCTGCTTATTTATGTATGTCCACTATACTCTCCTGTGGGGGGGCGCGGCTCCCAT T



consensusID : consensus_12551#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 762
fasta sequence
                              [AAGCTAAACCTCGCGACGCGCGTTCCCCTCCCTTCTCTTCTCCTCCTCCTCGGGGTGTCGAGGCGCCCGCCTGCCGGCGCGGTGTGCTCGGTGAGGCGGATCGGGGGGGTCGCTTCCTCGCGTGGTGGTGGCGCGCGCGCGCATGTGGATCGGCGAGATGGGGACGGCGTCTCCCGTGTGCGGCGCTTGATGGGAGGTTCGATCCACCGGCGGCGTCGTTTTGCGTTGGATCTATCATCTATGTTTGTGTCGCTGTGATCTATCTCCGCGAGTTCCTCGGGAATTTAGAATTGCAGCTGAACTGATGGGATGGGAGGTCGCGCTAGCTAGTAGGTGAAACATTAGGATTTCACATTACGATTTTATTGGGATTTCATTCTAGGATTTTAGGATTTCAGGGTTTTGGATTTCACATTACGATTTTATTAGGATTTCACATTAGGATTTTAGGATTTCAGGGTTTTGGAGTTATTAGGATTTCACATTAGGATTTTAGGGTTTCAGGGTTTTGGAGTGGCGTTGAAGGGATTACGAGTGGCTCCGTCGCGCAGCGCTTGGCAGTGCTACCTACCTGTTTGCAGAGTTGCTTAGGTAACGGCCTTGGAGTGTGCATAACTGTTGTTTTGGTTGTTTTAGCGCCTCGGTTGGTCGCTCCAGAGTTCTGGAAGCTGCTGTGCTGTGTGACTACTGATTTCTTTGATTACTCGTGGCTTGTTGATGTGCCCTTTGGTACGCAAGTTGTTGGTGCCAGCATTTTCCTGT]

[+] EMBL CB631698             [AAGCTAAACCTCGCGACGCGCGTTCCCCTCCCTTCTCTTCTCCTCCTCCTCGGGGTGTCGAGGCGCCCGCCTGCCGGCGCGGTGTGCTCGGTGAGGCGGATCGGGGGGGTCGCTTCCTCGCGTGGTGGTGGCGCGCGCGCGCATGTGGATCGGCGAGATGGGGACGGCGTCTCCCGTGTGCGGCGCTTGATGGGAGGTTCGATCCACCGGCGGCGTCGTTTTGCGTTGGATCTATCATCTATGTTTGTGTCGCTGTGATCTATCTCCGCGAGTTCCTCGGGAATTTAGAATTGCAGCTGAACTGATGGGATGGGAGGTCGCGCTAGCTAGTAGGTGAAACATTAGGATTTCACATTACGATTTTATTGGGATTTCATTCTAGGATTTTAGGATTTCAGGGTTTTGGATTTCACATTACGATTTTATTAGGATTTCACATTAGGATTTTAGGATTTCAGGGTTTTGGAGTTATTAGGATTTCACATTAGGATTTTAGGGTTTCAGGGTTTTGGAGTGGCGTTGAAGGGATTACGAGTGGCTCCGTCGCGCAGCGCTTGGCAGTGCTACCTACCTGTTTGCAGAGTTGCTTAGGTAACGGCCTTGGAGTGTGCATAACTGTTGTTTTGGTTGTTTTAGCGCCTCGGTTGGTCGCTCCAGAGTTCTGGAAGCTGCTGTGCTGTGTGACTACTGATTTCTTTGATTACTCGTGGCTTGTTGATGTGCCCTTTGGTACGCAAGTTGTTGGTGCCAGCATTTTCCTGT]


>consensus_12551#3 AAGCTAAACCTCGCGACGCGCGTTCCCCTCCCTTCTCTTCTCCTCCTCCTCGGGGTGTCG AGGCGCCCGCCTGCCGGCGCGGTGTGCTCGGTGAGGCGGATCGGGGGGGTCGCTTCCTCG CGTGGTGGTGGCGCGCGCGCGCATGTGGATCGGCGAGATGGGGACGGCGTCTCCCGTGTG CGGCGCTTGATGGGAGGTTCGATCCACCGGCGGCGTCGTTTTGCGTTGGATCTATCATCT ATGTTTGTGTCGCTGTGATCTATCTCCGCGAGTTCCTCGGGAATTTAGAATTGCAGCTGA ACTGATGGGATGGGAGGTCGCGCTAGCTAGTAGGTGAAACATTAGGATTTCACATTACGA TTTTATTGGGATTTCATTCTAGGATTTTAGGATTTCAGGGTTTTGGATTTCACATTACGA TTTTATTAGGATTTCACATTAGGATTTTAGGATTTCAGGGTTTTGGAGTTATTAGGATTT CACATTAGGATTTTAGGGTTTCAGGGTTTTGGAGTGGCGTTGAAGGGATTACGAGTGGCT CCGTCGCGCAGCGCTTGGCAGTGCTACCTACCTGTTTGCAGAGTTGCTTAGGTAACGGCC TTGGAGTGTGCATAACTGTTGTTTTGGTTGTTTTAGCGCCTCGGTTGGTCGCTCCAGAGT TCTGGAAGCTGCTGTGCTGTGTGACTACTGATTTCTTTGATTACTCGTGGCTTGTTGATG TGCCCTTTGGTACGCAAGTTGTTGGTGCCAGCATTTTCCTGT



consensusID : consensus_12551#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 465
fasta sequence
                              [TCGAGGACACCGATTCTGTGTGCCCTATGGNTTGGGTGCAAATGTAATGCTGGAGTACTCCTGCGACGAGGCCCAACGCCCTCTTGAAAAAGGAATCTGGAAAACGCCAAGGCCAGTTTAGAAGTCCTTGTTGCTGATCTCCAGTTCTTGCGGGACCAACAAACGATCACTCAGGTTACAATTGCTCGGGTGTTCAACTGGGACGTGCACCAACGGAGAAGCAAGCAAGCTATCAAAGAAACCTGATCATCATACCCGCAGATTCTACCAGCCAAAATGAGATCGCGACATTTTTGTACTTCTTGCCACCTCTGGCAGTCTAGGCCATCGTAGCATGTGCCCTCTGTTGGCGCCTTGCCGTGTAACAGTGTATCAGGTTTTATGGTGTTGGATTGTTGGAACTCTGTTTGCCTTGCAAGTAGAAATTGGTGTTTGTTTTCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU096786             [TCGAGGACACCGATTCTGTGTGCCCTATGGNTTGGGTGCAAATGTAATGCTGGAGTACTCCTGCGACGAGGCCCAACGCCCTCTTGAAAAAGGAATCTGGAAAACGCCAAGGCCAGTTTAGAAGTCCTTGTTGCTGATCTCCAGTTCTTGCGGGACCAACAAACGATCACTCAGGTTACAATTGCTCGGGTGTTCAACTGGGACGTGCACCAACGGAGAAGCAAGCAAGCTATCAAAGAAACCTGATCATCATACCCGCAGATTCTACCAGCCAAAATGAGATCGCGACATTTTTGTACTTCTTGCCACCTCTGGCAGTCTAGGCCATCGTAGCATGTGCCCTCTGTTGGCGCCTTGCCGTGTAACAGTGTATCAGGTTTTATGGTGTTGGATTGTTGGAACTCTGTTTGCCTTGCAAGTAGAAATTGGTGTTTGTTTTCAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12551#4 TCGAGGACACCGATTCTGTGTGCCCTATGGNTTGGGTGCAAATGTAATGCTGGAGTACTC CTGCGACGAGGCCCAACGCCCTCTTGAAAAAGGAATCTGGAAAACGCCAAGGCCAGTTTA GAAGTCCTTGTTGCTGATCTCCAGTTCTTGCGGGACCAACAAACGATCACTCAGGTTACA ATTGCTCGGGTGTTCAACTGGGACGTGCACCAACGGAGAAGCAAGCAAGCTATCAAAGAA ACCTGATCATCATACCCGCAGATTCTACCAGCCAAAATGAGATCGCGACATTTTTGTACT TCTTGCCACCTCTGGCAGTCTAGGCCATCGTAGCATGTGCCCTCTGTTGGCGCCTTGCCG TGTAACAGTGTATCAGGTTTTATGGTGTTGGATTGTTGGAACTCTGTTTGCCTTGCAAGT AGAAATTGGTGTTTGTTTTCAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12551#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 270
fasta sequence
                              [GATCATCATACCCGCTACCAGCCAAAATGAGATCGCGACATTTTTGTACTTCTTGCCACCACTGGCAGTTTAGCCCATCGTAGCATGTGCCCTCTGTTGGCCCCTTGCCTTGTAACAGTGTATCAGGTTTTATGGTGTTTGGATTGTTGGAACTCTGTTTGCCTTTGCATGCGGTAGAAAATTGGTGTTTGTTTTCACTTCGGTTCGCGTGATGGAACATATTTTGAGGAGTAAAAATATATCATCATCATTCTTAGCGGTTTAAAAAAA]

[+] EMBL BI802951             [GATCATCATACCCGCTACCAGCCAAAATGAGATCGCGACATTTTTGTACTTCTTGCCACCACTGGCAGTTTAGCCCATCGTAGCATGTGCCCTCTGTTGGCCCCTTGCCTTGTAACAGTGTATCAGGTTTTATGGTGTTTGGATTGTTGGAACTCTGTTTGCCTTTGCATGCGGTAGAAAATTGGTGTTTGTTTTCACTTCGGTTCGCGTGATGGAACATATTTTGAGGAGTAAAAATATATCATCATCATTCTTAGCGGTTTAAAAAAA]


>consensus_12551#5 GATCATCATACCCGCTACCAGCCAAAATGAGATCGCGACATTTTTGTACTTCTTGCCACC ACTGGCAGTTTAGCCCATCGTAGCATGTGCCCTCTGTTGGCCCCTTGCCTTGTAACAGTG TATCAGGTTTTATGGTGTTTGGATTGTTGGAACTCTGTTTGCCTTTGCATGCGGTAGAAA ATTGGTGTTTGTTTTCACTTCGGTTCGCGTGATGGAACATATTTTGAGGAGTAAAAATAT ATCATCATCATTCTTAGCGGTTTAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12551#1      CCTTCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGC 60
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------TCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGC 36
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      CCTTCTCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCCTCGAGATTTCTCATGGC 60
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      GGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCCGCAGGGGGTGACGGA 120
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      GGCGGCGGCGGCCTCC------TCGTCGGCGGAGGCGGCGACGCCGCAGGGGGTGACGGA 90
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      GGCGGCGGCGGCCTCCTCCTCCTCCTCGTCGGCGGCGGCGACGCCGCAGGGGGTGACGGA 120
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      GCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGC 180
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      GCGGCGGGGAATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGC 150
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      GCGGCGGGGCATCCCGGCGGCGTCCTTCGTCGAGGACGTCGAGACCTACCTCCGCCAGGC 180
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      CGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGCTGCAGCAGTACAAAAT 240
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      CGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGCTGCAGCAGTACAAAAT 210
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      CGGGCTCGACGTCAACTCCGGCCTCGCCTTCCTCCAGGAAAGGTATAGGTAGAGATAGCT 240
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      --AGTGGAGATGAAACTTCTAGCACAACAGAGAGATCT---TCAGGCAAAAATTCCTGAT 295
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      --AGTGGAGATGAAACTTCTTGCACAACAGAGAGATCT---TCAGGCAAAAATTCCTGAT 265
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      CCAGCTAAGCTAAGCCTCGCGACGCGCGTTCCCCCTCC--CTTCTCTTCTCCTCCTCGGG 298
consensus_12551#3      ------AAGCTAAACCTCGCGACGCGCGTTCCCCTCCCTTCTCTTCTCCTCCTCCTCGGG 54
                                                                                   

consensus_12551#1      ATAGAGAAGTGCTTGGATATTGTTGCAACTTTACAAGCTAAAAAAGCTTTGGGTGAGGCA 355
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ATAGAGAAGTGCTTGGATATTGTTGCAACTTTACAAGCTAAAAAAGCTTTGGGTGAGGAG 325
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      GTGTCGAGGCGACCGCCTGCCG-CGCAGTGTGCTCGGTGAGGCGGATCGGGGGGGGGGGG 357
consensus_12551#3      GTGTCGAGGCGCCCGCCTGCCGGCGCGGTGTGCTCGGTGAGGCGGATCGGGGGGG----- 109
                                                                                   

consensus_12551#1      C---TCACAGCCGATTTTGAATTATCTGAGGGAATCTACTCCCGTGCGAAAATCGAGGAC 412
consensus_12551#4      ----------------------------------------------------TCGAGGAC 8
consensus_12551#2      C---TCACAGCCGATTTTGAATTATCTGAGGGAATCTACTCCCGTGCGAAAATCGAGGAC 382
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      GGGGTCGCTTCCTCGCGTGGTGGTGGTGCGCGCGCGCATGTGGATCGGCGAGATGGGGAC 417
consensus_12551#3      ----TCGCTTCCTCGCGTGGTGGTGGCGCGCGCGCGCATGTGGATCGGCGAGATGGGGAC 165
                                                                                   

consensus_12551#1      ACCGATTC---TGTGTGCC-TATGGTT-GGGTGCAAATGTAATGCTGGAGTACTCCTGCG 467
consensus_12551#4      ACCGATTC---TGTGTGCCCTATGGNTTGGGTGCAAATGTAATGCTGGAGTACTCCTGCG 65
consensus_12551#2      ACCGATTC---TGTGTGCC-TATGGTT-GGGTGCAAATGTAATGCTGGAGTACTCCTGCG 437
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      GGCGTCTCCCGTGTGCGGCGCTTGATGGGAGGTTCGATCCACCGGCGGCGTCGTCTTGCG 477
consensus_12551#3      GGCGTCTCCCGTGTGCGGCGCTTGATGGGAGGTTCGATCCACCGGCGGCGTCGTTTTGCG 225
                                                                                   

consensus_12551#1      ACGAGGCC-AACGCCCTCTTGAAAAAG-AATCTGGAAAACGCCAAGGCCAGTTTAGAAGT 525
consensus_12551#4      ACGAGGCCCAACGCCCTCTTGAAAAAGGAATCTGGAAAACGCCAAGGCCAGTTTAGAAGT 125
consensus_12551#2      ACGAGGCC-AACGCCCTCTTGAAAAAG-AATCTGGAAAACGCCCAGGCCAGTTTAGAAGT 495
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      TTGGATCTATCATCTATGTTTGTGTCGCTGTGATCTATCTCCGCGAGTTCCTCGGGAATT 537
consensus_12551#3      TTGGATCTATCATCTATGTTTGTGTCGCTGTGATCTATCTCCGCGAGTTCCTCGGGAATT 285
                                                                                   

consensus_12551#1      CC---TTGTTGCTGATCTCCAGTTCTTGCGGGACCAACAAACGATCACTCAGGTTACAAT 582
consensus_12551#4      CC---TTGTTGCTGATCTCCAGTTCTTGCGGGACCAACAAACGATCACTCAGGTTACAAT 182
consensus_12551#2      CC---TTGTTGCTGATCTCCAGGTCTTTGCGGACCAACAAACGATCACTCAGGTTACAAT 552
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      TAGGATTGCAGCTGACCTGATGGGATGGGAGGTCGCGCTAGCTAGTAGGTGAAACATTAG 597
consensus_12551#3      TAGAATTGCAGCTGAACTGATGGGATGGGAGGTCGCGCTAGCTAGTAGGTGAAACATTAG 345
                                                                                   

consensus_12551#1      TGCTCGGGTGTTCAACTGGGACGTGCACCAACGGAGAAGCAAGCAAGCTATCAAAGAAAC 642
consensus_12551#4      TGCTCGGGTGTTCAACTGGGACGTGCACCAACGGAGAAGCAAGCAAGCTATCAAAGAAAC 242
consensus_12551#2      TGCTTGGGTGTTCAACTGGGACGTGCACCAACCGGAGAACAAGCCAGCTTTCAA-GAAAA 611
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      GATTTCACATTACGATTTTATTAGGATTTCATTTTTAGGATTTTAGGATTTCA--GGGTT 655
consensus_12551#3      GATTTCACATTACGATTTTATTGGGATTTCATTCT-AGGATTTTAGGATTTCA--GGGTT 402
                                                                                   

consensus_12551#1      CTGATCATCATACCCGCAGATTCT-ACCAGCCAAAA---------TGAGATCGCGACATT 692
consensus_12551#4      CTGATCATCATACCCGCAGATTCT-ACCAGCCAAAA---------TGAGATCGCGACATT 292
consensus_12551#2      CTGGTCATTATACCCGCAGATTCTTACCAGCCAAA----------TGGAAACGCGACTTT 661
consensus_12551#5      --GATCATCATACCCGCT-------ACCAGCCAAAA---------TGAGATCGCGACATT 42
consensus_12551#0      TTGGATTTCACATTACGATTTTATTAGGATTT-------------TAGGATTTCAGGGTT 702
consensus_12551#3      TTGGATTTCACATTACGATTTTATTAGGATTTCACATTAGGATTTTAGGATTTCAGGGTT 462
                         *    * * *             *  *                *   *   *    **

consensus_12551#1      TTTGTACTTCTTG---CCACCTCTGGCAGTCTAGGCCATCGTAGCATGTGCCCTCTGTTG 749
consensus_12551#4      TTTGTACTTCTTG---CCACCTCTGGCAGTCTAGGCCATCGTAGCATGTGCCCTCTGTTG 349
consensus_12551#2      TTTG-GCCTTTTG---CCACCACTGGGCGGTTAAGCCATCGTATCATTTGCCCTCTGTTG 717
consensus_12551#5      TTTGTACTTCTTG---CCACCACTGGCAGTTTAGCCCATCGTAGCATGTGCCCTCTGTTG 99
consensus_12551#0      TTGGAGTTATTAGGATTTCACATTAGGATTTTAGGATTTCAGGGTTTTGGAGTGGCGTTG 762
consensus_12551#3      TTGGAGTTATTAGGATTTCACATTAGGATTTTAGGGTTTCAGGGTTTTGGAGTGGCGTTG 522
                       ** *      * *       *  * *     **     **      *  *      ****

consensus_12551#1      ---GCGCCTTGCCGTGTAACAGTGTATCAGGTTTTATGGTGTT-GGATTGTTGGAACTCT 805
consensus_12551#4      ---GCGCCTTGCCGTGTAACAGTGTATCAGGTTTTATGGTGTT-GGATTGTTGGAACTCT 405
consensus_12551#2      ---GGCCCTTGC--TTTAACAGTGTATAAGGTTT-ATGGGGTT-TGATTGTTGGAACCCT 770
consensus_12551#5      ---GCCCCTTGCCTTGTAACAGTGTATCAGGTTTTATGGTGTTTGGATTGTTGGAACTCT 156
consensus_12551#0      AAGGGATCATGAGTGGCTCCGTCGCGCAGCGCTTGTCAGTGCT--ACCTACCTGTTTGCA 820
consensus_12551#3      AAGGGATTACGAGTGGCTCCGTCGCGCAGCGCTTGGCAGTGCT--ACCTACCTGTTTGCA 580
                          *      *        *   *      * **    * * *     *    *    * 

consensus_12551#1      GTTTGCCTT-GCAAGTAG----AAATTGGTGTTTGTT-TTCACTTCGGTTCGCGTGATGG 859
consensus_12551#4      GTTTGCCTT-GCAAGTAG----AAATTGGTGTTTGTT-TTCAAAAAAAAAAAAAAAAAAA 459
consensus_12551#2      GTTGGCCTT-GCATGCCG----GGAAAAATGGGGGTGGTTTAACTTCGGCCGCTTGATGG 825
consensus_12551#5      GTTTGCCTTTGCATGCGGTAGAAAATTGGTGTTTGTT-TTCACTTCGGTTCGCGTGATGG 215
consensus_12551#0      GAGTTGCTTAGGTAATGGCCTTGGAGTG-TGCATACCTGTTGTTTTGGTTGTTT-AGCGA 878
consensus_12551#3      GAGTTGCTTAGGTAACGGCCTTGGAGTG-TGCATAACTGTTGTTTTGGTTGTTTTAGCGC 639
                       *     *** *      *      *    **        *                    

consensus_12551#1      AACATATTTTGAGGAGTAAAAATCTTAGCGGTTTTCAGAGAGAAACCTTTGCAATGCGTG 919
consensus_12551#4      AAAAAA------------------------------------------------------ 465
consensus_12551#2      AACAATTTTTGGGGGGTAAAAATTTTTTAGAAAACAAATCCGTTTACAATTTATCTCTTA 885
consensus_12551#5      AACATATTTTGAGGAGTAAAAATATATCATCATCATTCTTAGCGGTTTAAAAAAA----- 270
consensus_12551#0      CTCGGCTTGGCCGCTCCAGAGGTCTGGAAGCTGCTGTGCTGTATGACTGATTGATTTCAT 938
consensus_12551#3      CTCGG-TTGGTCGCTCCAGAGTTCTGGAAGCTGCTGTGCTGTGTGACT----------AC 688
                                                                                   

consensus_12551#1      TCATGTTTTGGGTTTGCANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------- 968
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      TGAGAATGTGCCTCAATGTTGCTGCTTATTTATGTATGTCCACTATACTCTCCTGTGGGG 945
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      TGATTTCTTTGATTACTCATGGTTTGTTGATCATGCCCTTTGGTACGCTAGTTGTTGGTG 998
consensus_12551#3      TGATTTCTTTGATTACTCGTGGCTTGTTGAT-GTGCCCTTTGGTACGCAAGTTGTTGGTG 747
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      GGGCGCGGCTCCCATT-------------------------------------------- 961
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      CCTGCGTTTTTCTGTTGATTATGGATGATAGCCGGATTTCCTGTTAAAGACATGTTGTTC 1058
consensus_12551#3      CCAGCATTTTCCTGT--------------------------------------------- 762
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      GGTAAAATTGCTGGTTCTGCGGTTACAGCTTGTGCATCATGCTTGATCTGGGAAAGGCTA 1118
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      TTCCTTTCTTGGGATCTTGAACCCTCAACACAAGCATGTCAATCAATGTGATTGTCCCCC 1178
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      ATGATTCGGATGCGAACAACTCTCACGTTGACCAGTAATCCCATTTAGTCTCGTTTCAAG 1238
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      AATTATGGGGTTACTAATATTTCAAATAATGCTAATTCCAGGTAGTTGTGCTAGTGCAGT 1298
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      TGGCAGGGGCAGCCGTCGTCCGCCCCGCCAGCTTGCGTTTGACTCCCAAGCGTGCTCACA 1358
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      TCCGTTGTTAATTAATCGATACCAAGCTCCTTCTTAGTTATCCTATGTTTTCTACCTTCA 1418
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      AATAAGGAATGCAACGTGTCATTGTAGATGTAGAATTTTAGGGGATGTAGACCTAGACAT 1478
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      CTGTTGGTCTAGGTCAGTTATTCTAATGATAAAGGTTTTTAAGGTGCACCACCTTGTATG 1538
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      GAGACCATTTGTTCGTTTTGATGTAACGGCTATCATGAATCTTAACTGTACCTTCAAGGA 1598
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      TCTAAGAGACCATCTATAACCTTTTAAAGGATAATGATATCTTTAAACATTGTCAAATTT 1658
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      CATTACTGATAGATAAAAAGAAAATAAGATAGTATTTGAAAGGAAAGGGATTAAAATACA 1718
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      ATTAATTCCATCCTTTATTGTCAAACGATTTGCCATTTTCCTTGCTAAAAGAAAAACTTC 1778
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      CTTCAGTAATTTTTGTTGGCACTGAGAAATGCAAATCTTGTTCTGGAATACAAACATTTA 1838
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      ATAATCAGTAGTACACTAGGTTACACAAAAGAATTGACTTCTGAGACTTTCATCTTGTGA 1898
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      AATTGATAGTTAATTTAGCTTTTTATTTTTTGGGGTGTTTTCTATTCATCAACGACTTGA 1958
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ------------------------------------------------------------
consensus_12551#4      ------------------------------------------------------------
consensus_12551#2      ------------------------------------------------------------
consensus_12551#5      ------------------------------------------------------------
consensus_12551#0      GAATTGCTAGATCCCAATCAACTTTCTTTTTTCATTCTTCTTATTTACTTGCACTTGAAA 2018
consensus_12551#3      ------------------------------------------------------------
                                                                                   

consensus_12551#1      ---------------------------
consensus_12551#4      ---------------------------
consensus_12551#2      ---------------------------
consensus_12551#5      ---------------------------
consensus_12551#0      CAGAAAATTACATTAGAAACAACATTA 2045
consensus_12551#3      ---------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)