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Oryza sativa
cluster # 12559 cluster # 12559       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12559#0 length = 1147 sequences # 8  
consensus_12559#1 length = 717 sequences # 1  
consensus_12559#2 length = 291 sequences # 1  

consensusID : consensus_12559#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1147
fasta sequence
                              [CATTTGTTCGATCCAATTCCCATCCTTCTTCCTCTCTGATCCGGAGCGGCTGCAGCGTAGAGATGGGGAGGCGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCCGAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAAGGCCGCGCGGTCGGGAGATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATCGCCTCTCTCGCACCCCACTCCATTTGGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGTGCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATGGATGACACCGCTGCGATCCATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAAAGGCTTCACTGCGTTGCACTTTGCTTCGCAGAACTCCCACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAAGGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCGTGATTTCCTGAAAGAATGTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAAGAAGGATGATTCTGTGTCAACGATTGCTGAGAAGCCTGACGATGA-CAAGTCCTCGGGTGA-GGCTACAAAAGACGAAGATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGCTGCTGCACTGAGGTCACCGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAGTGCAAATGACATGGAGGAAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCACCCTCTACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGTATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTACCAGCTTGAGTAAAAAATGGTGTTTTTGTCTCAAAAAAAAAAAAAAAAANCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN]

[+] EMBL BP184534             [CATTTGTTCGATCCAATTCCCATCCTTCTTCCTCTCTGATCCGGAGCGGCTGCAGCGTAGAGATGGGGAGGCGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCCGAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAAGGCCGCGCGGTCGGGAGATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATCGCCTCTCTCGCACCCCACTCCATTTGGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGTGCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATGGATGACACCGCTGCGATCCATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAAAGGCTTCACTGCGTTGCACTTTGCTTCGCAGAACTCCCACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAAGGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCGTGATTTCCTGAAAGAATGTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAAGAAGGATGATTCTGTGTCAACGATTGCTGAGAAGCCTGACGATGA CAAGTCCTCGGGTGA GGCTACAAAAGACGAAGATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGCTGCTGCACTGAGGTCACCGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAGTGCAAATGACATGGAGGAAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCACCCTCTACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGTATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTACCAGCTTGAGTAAAAAA                                                                                                                   ]
[+] EMBL AB110173             [CATTTGTTCGATCCAATTCCCATCCTTCTTCCTCTCTGATCCGGAGCGGCTGCAGCGTAGAGATGGGGAGGCGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCCGAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAAGGCCGCGCGGTCGGGAGATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATCGCCTCTCTCGCACCCCACTCCATTTGGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGTGCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATGGATGACACCGCTGCGATCCATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAAAGGCTTCACTGCGTTGCACTTTGCTTCGCAGAACTCCCACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAAGGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCGTGATTTCCTGAAAGAATGTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAAGAAGGATGATTCTGTGTCAACGATTGCTGAGAAGCCTGACGATGA CAAGTCCTCGGGTGA GGCTACAAAAGACGAAGATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGCTGCTGCACTGAGGTCACCGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAGTGCAAATGACATGGAGGAAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCACCCTCTACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGTATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTAC                                                                                                                                   ]
[+] EMBL AK071604             [             CAATTCCCATCCTTCTTCCTCTCTGATCCGGAGCGGCTGCAGCGTAGAGATGGGGAGGCGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCCGAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAAGGCCGCGCGGTGGGGAGATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATCGCCTCTCTCGCACCCCACTCCATTTGGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGTGCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATGGATGACACCGCTGCGATCCATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAAAGGCTTCACTGCGTTGCACTTTGCTTCGCAGAACTCCCACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAAGGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCGTGATTTCCTGAAAGAATGTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAAGAAGGATGATTCTGTGTCAACGATTGCTGAGAAGCCTGACGATGA CAAGTCCTCGGGTGA GGCTACAAAAGACGAAGATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGCTGCTGCACTGAGGTCACCGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAGTGCAAATGACATGGAGGAAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCACCCTCTACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGTATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTACCAGC                                                                                                                               ]
[+] EMBL AU174209             [                                                   GCAGCGTAGAGATGGGGAGGCGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCCGAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAAGGCCGCGCGGTCGGGAGATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATCGCCTCTCTCGCACCCCACTCCATTTGGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGTGCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATGGATGACACCGCTGCGATCCATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAAAGGCTTCACTGCGTTGCACTTTGCTTCGCAGAACTCCCACCTGGAGCTTGTGAAGTATTTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB639705             [                                                                    AGGCGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCCGAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAATGCCGCGCGGTCGGGAGATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATCGCCTCTCTCGCACCCCACTCCATTTGGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGTGCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATGGATGACACCGCTGCGATCCATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU077481             [                                                                       CGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCCGAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAAGGCCGCGCGGTCGGGAGATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATCGCCTCTCTCGCACCCCACTCCATTTNGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGTGCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATNGATGACACCGCTGCGATCCATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCTCTGTGAAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA753521             [                                                                                GGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCCGAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAAGGCCGCGCGGTCGGGAGATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATCGCCTCTCTCGCACCCCACTCCATTTGGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGTGCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATGGATGACACCGCTGCGATCCATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAAAGGCTTCACTGCGTTGCACTTTGCTTCGCAGAACTCCCACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAAGGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTNCGTGATNTCCTGAAAGAATGTGAGCAGTCATGGAAGAAGGGAGGTGAGCCTCCATCGGAAGAGAAGGATGGATCTGTGTCAACGATGGCTGAGAGGCCTACCGATGACCANGTCCTC GGTGANGGCTAC CAAGACaang                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL AU182124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGTATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTACCAGCTTGAGTACTCGATGGTGTTTTTGTCTCAAAAAAAAAAAAAAAAANCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN]


>consensus_12559#0 CATTTGTTCGATCCAATTCCCATCCTTCTTCCTCTCTGATCCGGAGCGGCTGCAGCGTAG AGATGGGGAGGCGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCC GAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAAGGCCGCGCGGTCGGGAG ATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATC GCCTCTCTCGCACCCCACTCCATTTGGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGT GCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATGGATGACACCGCTGCGATCC ATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCT CTGTGAAAGCAAAGAACAGGAAAGGCTTCACTGCGTTGCACTTTGCTTCGCAGAACTCCC ACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAAG GGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCGTGATTTCCTGAAAGAAT GTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAAGAAGGATGATTCTGTGT CAACGATTGCTGAGAAGCCTGACGATGACAAGTCCTCGGGTGAGGCTACAAAAGACGAAG ATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGCTGCTGCACTGAGGTCAC CGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAGTGCAAATGACATGGAGG AAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCACCCTC TACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGTA TGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTACCAGC TTGAGTAAAAAATGGTGTTTTTGTCTCAAAAAAAAAAAAAAAAANCAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAN



consensusID : consensus_12559#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 717
fasta sequence
                              [CTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAAAGGCTTTNACTGCGTTGCACTTTTNTTCGCAGAACTCCCACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAAGGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCGTGATTTCCTGAAAGAATGTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAAGAAGGATGATTCTGTGTCAACGATTGCTGAGAAGCCTGACGATGACAAGTCCTCGGGTGAGGCTACAAAAGACGAAGATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGCTGCTGCACTGAGGTCACCGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAGTGCAAATGACATGGAGGAAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCACCCTCTACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGTATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTACCAGCTTGAGTACTCGATGGTGTTTTTGTCTCCTTTTCTCAAAAGAAAAAAAAACTCCGAAGGTGGCAGGCAAACGGAGGGAAGACCATTCACCTCGAAAAAAAA]

[+] EMBL AU077480             [CTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAAAGGCTTTNACTGCGTTGCACTTTTNTTCGCAGAACTCCCACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAAGGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCGTGATTTCCTGAAAGAATGTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAAGAAGGATGATTCTGTGTCAACGATTGCTGAGAAGCCTGACGATGACAAGTCCTCGGGTGAGGCTACAAAAGACGAAGATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGCTGCTGCACTGAGGTCACCGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAGTGCAAATGACATGGAGGAAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCACCCTCTACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGTATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTACCAGCTTGAGTACTCGATGGTGTTTTTGTCTCCTTTTCTCAAAAGAAAAAAAAACTCCGAAGGTGGCAGGCAAACGGAGGGAAGACCATTCACCTCGAAAAAAAA]


>consensus_12559#1 CTGGCATCTGGTGCCTCTGTGAAAGCAAAGAACAGGAAAGGCTTTNACTGCGTTGCACTT TTNTTCGCAGAACTCCCACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACAT CGCCGCAAAGACAAAAGGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCG TGATTTCCTGAAAGAATGTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAA GAAGGATGATTCTGTGTCAACGATTGCTGAGAAGCCTGACGATGACAAGTCCTCGGGTGA GGCTACAAAAGACGAAGATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGC TGCTGCACTGAGGTCACCGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAG TGCAAATGACATGGAGGAAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGC AATTTGATGGCACCCTCTACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGG ATGTGGACAGAACTGTATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAG TATAACTGATTACCAGCTTGAGTACTCGATGGTGTTTTTGTCTCCTTTTCTCAAAAGAAA AAAAAACTCCGAAGGTGGCAGGCAAACGGAGGGAAGACCATTCACCTCGAAAAAAAA



consensusID : consensus_12559#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 291
fasta sequence
                              [TGCTGCTGCNCTGAGGTCCCCGGAACTGAAAAAAGCCAAAGTTTCNCTTGGGCATNTAATAAGTGCAAATGACATGGAGGAANAGGAANAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCCCCCTNTACGTTTTGTTATATATCCTTTGTTNTCGTATGGCAAGCTGGGATGTGGACANAACTGTATGAGCGTGATACTAACTGTGTTTNTTNCTGAACTANCAGTAAGTATAACTGATTACCAGCTTGNGTAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU174210             [TGCTGCTGCNCTGAGGTCCCCGGAACTGAAAAAAGCCAAAGTTTCNCTTGGGCATNTAATAAGTGCAAATGACATGGAGGAANAGGAANAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCCCCCTNTACGTTTTGTTATATATCCTTTGTTNTCGTATGGCAAGCTGGGATGTGGACANAACTGTATGAGCGTGATACTAACTGTGTTTNTTNCTGAACTANCAGTAAGTATAACTGATTACCAGCTTGNGTAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12559#2 TGCTGCTGCNCTGAGGTCCCCGGAACTGAAAAAAGCCAAAGTTTCNCTTGGGCATNTAAT AAGTGCAAATGACATGGAGGAANAGGAANAAGCTGACTAGACTAATGTAGGACGCGAGAA TGCAATTTGATGGCCCCCTNTACGTTTTGTTATATATCCTTTGTTNTCGTATGGCAAGCT GGGATGTGGACANAACTGTATGAGCGTGATACTAACTGTGTTTNTTNCTGAACTANCAGT AAGTATAACTGATTACCAGCTTGNGTAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12559#0      CATTTGTTCGATCCAATTCCCATCCTTCTTCCTCTCTGATCCGGAGCGGCTGCAGCGTAG 60
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      ------------------------------------------------------------
                                                                                   

consensus_12559#0      AGATGGGGAGGCGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGCCGTGGAGGCC 120
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      ------------------------------------------------------------
                                                                                   

consensus_12559#0      GAGGCCGCGGAGGAGGCGAGGAGGATGACTTGCATCTGCACAAGGCCGCGCGGTCGGGAG 180
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      ------------------------------------------------------------
                                                                                   

consensus_12559#0      ATTTGGCGGCGGCGGAGTCTCTGTGCGAGGCCAACCCTCTCGCCCTCAATTCCAGAGATC 240
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      ------------------------------------------------------------
                                                                                   

consensus_12559#0      GCCTCTCTCGCACCCCACTCCATTTGGCAGCATGGGCTGGACATGTTGAGCTTGTGAAGT 300
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      ------------------------------------------------------------
                                                                                   

consensus_12559#0      GCCTTTGCAAGCACAAAGCTGATGTTGGAGCTGCAGCTATGGATGACACCGCTGCGATCC 360
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      ------------------------------------------------------------
                                                                                   

consensus_12559#0      ATTTTGCCTCTCAGAAAGGCCATGTAGAGGTTGTCCGTGAGCTGCTGGCATCTGGTGCCT 420
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      --------------------------------------------CTGGCATCTGGTGCCT 16
                                                                                   

consensus_12559#0      CTGTGAAAGCAAAGAACAGGAAAGGCTT-CACTGCGTTGCACTTTGCTTCGCAGAACTCC 479
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      CTGTGAAAGCAAAGAACAGGAAAGGCTTTNACTGCGTTGCACTTTTNTTCGCAGAACTCC 76
                                                                                   

consensus_12559#0      CACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAA 539
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      CACCTGGAGCTTGTGAAGTATTTAGTCAAGAAAGGTGCAGACATCGCCGCAAAGACAAAA 136
                                                                                   

consensus_12559#0      GGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCGTGATTTCCTGAAAGAA 599
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      GGGGGTCAGACGGCTCTACATGTTGCAGAGAAGGATGATGTTCGTGATTTCCTGAAAGAA 196
                                                                                   

consensus_12559#0      TGTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAAGAAGGATGATTCTGTG 659
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      TGTGAGCAGTCATTGAAGAAGGGAGGTGAGCTTCCATCGGAGAAGAAGGATGATTCTGTG 256
                                                                                   

consensus_12559#0      TCAACGATTGCTGAGAAGCCTGACGATGACAAGTCCTCGGGTGAGGCTACAAAAGACGAA 719
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      TCAACGATTGCTGAGAAGCCTGACGATGACAAGTCCTCGGGTGAGGCTACAAAAGACGAA 316
                                                                                   

consensus_12559#0      GATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGCTGCTGCACTGAGGTCA 779
consensus_12559#2      -----------------------------------------TGCTGCTGCNCTGAGGTCC 19
consensus_12559#1      GATGAAGCGGGGTTTGGCGAGAAGAGGAAAAGCGATGGCATTGCTGCTGCACTGAGGTCA 376
                                                                ********* ******** 

consensus_12559#0      CCGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAGTGCAAATGACATGGAG 839
consensus_12559#2      CCGGAACTGAAAAAAGCCAAAGTTTCNCTTGGGCATNTAATAAGTGCAAATGACATGGAG 79
consensus_12559#1      CCGGAACTGAAAAAAGCCAAAGTTTCACTTGGGCATCTAATAAGTGCAAATGACATGGAG 436
                       ************************** ********* ***********************

consensus_12559#0      GAAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCACCCT 899
consensus_12559#2      GAANAGGAANAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCCCCCT 139
consensus_12559#1      GAAGAGGAAGAAGCTGACTAGACTAATGTAGGACGCGAGAATGCAATTTGATGGCACCCT 496
                       *** ***** ********************************************* ****

consensus_12559#0      CTACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGT 959
consensus_12559#2      NTACGTTTTGTTATATATCCTTTGTTNTCGTATGGCAAGCTGGGATGTGGACANAACTGT 199
consensus_12559#1      CTACGTTTTGTTATATATCCTTTGTTCTCGTATGGCAAGCTGGGATGTGGACAGAACTGT 556
                        ************************* ************************** ******

consensus_12559#0      ATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTACCAG 1019
consensus_12559#2      ATGAGCGTGATACTAACTGTGTTTNTTNCTGAACTANCAGTAAGTATAACTGATTACCAG 259
consensus_12559#1      ATGAGCGTGATACTAACTGTGTTTCTTACTGAACTAGCAGTAAGTATAACTGATTACCAG 616
                       ************************ ** ******** ***********************

consensus_12559#0      CTTGAGTAAAAAATGGTGTTTTTGTCTC-----AAAAAAAAAAAAAAAAANCAAAAAAAA 1074
consensus_12559#2      CTTGNGTAAAAAAA-------------------AAAAAAAAAAAAAAAAAA--------- 291
consensus_12559#1      CTTGAGTACTCGATGGTGTTTTTGTCTCCTTTTCTCAAAAGAAAAAAAAACTCCGAAGGT 676
                       **** ***    *                       **** *********          

consensus_12559#0      AAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1134
consensus_12559#2      ------------------------------------------------------------
consensus_12559#1      GGCAGGCAAACGGAGGGAAGACCATTCACCTCGAAAAAAAA------------------- 717
                                                                                   

consensus_12559#0      AAAAAAAAAAAAN 1147
consensus_12559#2      -------------
consensus_12559#1      -------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)