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Oryza sativa
cluster # 12571 cluster # 12571       Sequences # 11       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12571#0 length = 3098 sequences # 7  
 consensus_12571#1 length = 988 sequences # 3  
consensus_12571#2 length = 728 sequences # 1  
consensusID : consensus_12571#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 3098
fasta sequence 
                              [GCACCGCTCCGCTGCTGCTGCTGCTGCTGCTCATCATCTCTCCGAAGCTTCTCATCTCCTCTCCACTCCTCCTCCTCCTCCTCCCCCTCGCCACCTCCCACGCGCTGCCACGCCGGCGACACGACCACTGCCTCCCCCCGCGCGGGCGCGCCAAGCGCCGGGATCCCGCTGCTGCGTTCCAGTTCGCGGCCGGGGCGTAGTAACCACAGCAGTGCAATACACCTTAAAATGGGGTCTACACGATCAAAGAATGAAGATGACAAGGCCATTGTCTTATGCCACGAAAGAAAACGATATGTTAGAGAAGCACTTGATGGAAGATGTGCATTCGCAGCTGCTCACTTCGCTTATATTCAATCACTGAGACACACAGGATTTGCTCTGAGAAAATTTTTGGAGCCTGAAGTGCCAACAGATTCTTCGCTGTACACATCGACATCTGCAACACCAGAACCTCCTACTATTCGGCAGAAATCGAGGAACTTATCTCCATCTATTTCACATCAGGCCAGTGACTCTTTCTCCCCAGTTCCATCCCCTTTATCTTCCGGACGGTTCCGTATCAATCATATGAAATCTGGGGGGAACCCTGTCATGACCATTGAGGAGAAGGTGCCTGTTCCTGTAACAGCAACTCTACAAACATCATCCCTTGTTCCTAAAGCTGTACATGACCTGGATGATAGTTCCACATTTGAAGCACCTCCAGGGACACCACCGTGGGACTACTTTGGCCTTTTTAACCCTGTTGAGAACCAATTTTCATTTCATGACGAGAAGGAGCCTGGTCATGACTTTGAAAACGC---TGATATCAGGCGTCTTCGGGAAAAGGAGGGAATTCCAGAGCTCGAAGAGGAAGGGGAGAAGACTCCTGTGCATCCTGACAATGTTAGGCGCTTCCGTGATGAGAAAACTTCAGATCTCAAAGATGCAGAAAAATCTCCTATCAATGGAAGGGAGGATGATTTTGCAGAGTCAGAAGATGATTTCGATAATCCATCATCTGAACCTTTAGTGAGGGTGTTCCAGAACCGCAATGATATGCCTGTTGAAAATACTGTGATGAATCAGACACCTGAACATGTGGCTTCAGAAAAGTTAGCTTCAGAGAATAGCGTTTCTTTTTCTCGAAAACAGGAGAATAGTGATTCTTTTTCTCGAAAACAGGAGAATAGTGATTCTTTTTCTCGAAAACAGGAGAATAGTGATTCATTTTCTCGAAAACAGGAGAATAGTGATTCTCAAATTGACAGGCCAAACAATGACAAGGAGGTGCTAGACATTAGCATGTTTGAAAGTGATGATGAAAGCCCTGTGGCAAGCCCTGTAAAAGAAGTGAGATCTTCCATTGCTGCTCTTCCTATGAATGGGAAATCAAAAGAACCTTTTCATGACGTTAGAAATGGTGCGAAGGATTTGCATTCATGCATGAAAGAGATTGAAATCTTGTTTATTAGGGCATCAGATTCTGGAAAAGAAGTACCAAGGATGCTTGAAGCAGATAAAGTCAATTTCCGGCCTTTACTGCCTGAAGAAAAAGCACATGGATCAAAAGCATCAGGCTTCTTTGCGACATTCTTTGCTTGCTGCGGTGGGGAGGAAATTCCTATTCCTCAGCCTCCTCCTGAGGCTGAAGTGAAGTACCTTACCTGGCACAGATCAGTTTCTTCACTCTCTTCATCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAATATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATATGCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGCTAGCGGTGCAATTTGTAGGCAATATGACGAAAAATGTAGGCAATTGAGACACCAGGAATCAAAAGCTGAAAGCCAAATGAGTATCGATAGAACCCGTGCTACTGTGAAGGATTTGCACTCCAGAATTATAGTGGCCATTCAGAGAATTGACATGATCTCTAAGAACATTGAGGATCTAAGGGACAAAGAGCTTCAACCACAGTTGGAGGAATTAATTGGGAGTTTAACTCGCATGTGGTCTACAATGCTTGAGTGTCACAAACATCAACGTGAGATTATTAAGTCCAGCAGTGGCAACACGAAGGTCTTAATTCGGTCGGAGTCACAATTTCAAGCAGCTCTACTCCTCCAGGTTGAGCTAAACACTTTATATTCAACCTTCCTGAAATGGATAGCATACCACAGATCGTACTTGCATAGCCTAAATTCATGGCTACTTAAGTGTGTGAAACCACTGAGGGGCAAGAAGAGCTCCAGGAGGAAGAAGGAAGCAGATACTCCCATAACTAAATTTGCTGTTGCACCCATGTTTAAAACCTGTGAAAGCTGGATAAAGTTATTGGATGATTTACCAACCAAGGACTTGGAAGATGCTATCAAAGGCCTCGTGGCAGATATAAACCACTCTGTGCCTCGCCAAGAAAAGCGGCGTGGTACTTCAAAGTTGACTTCCTCATTATCCCGTTCCAGTAGTACCAAGACGATTTCCTCATTTTTTCGGAATGGAGAGTTAAATGGTGAAATGTCAGAGATCCACAGAAATTCCCATACTACGGATTTACAGTCAAGTTTGGAGACATTCCTAGAGGGGTTTGCAGAGTTTTCAGATGTTTCACTGAAGAAGTATATGGAACTCGCGGTTGACATTAACAAAGCAAAGGAACAATATGAGAATGTGAAGTTAAAGAACATGGGAAAGTGAATAAGTTCGACAAAGTCAGACCAAAGGAACTAATTTCTGGAAGGAAGAATGGGCTACAATAACTCAAAGCCATTTAGAAGTGGATAAGTGGATCACCCATGTGTATATTA-GCCTGTTTAAACAATAGGTATAAATTACTGTTACTTTTCTTTTTGGGTTCAGTTTGCAAGATAGGTTTAGGTGGGAGAGGAATACTTGTAGATTTCTGGCCAATGCCATGCCGCAGAAGTGTAAATCTGAGGTTTA-GGTAAAATTAAA-CTGATGGTGGGGGATACAATATGTGTATTTATCCTGGGTATATCATTATATGAGTTTTCCCTTTTCTTCTCT----AAAAAAAGGGA]

[+] EMBL AK072126             [GCACCGCTCCGCTGCTGCTGCTGCTGCTGCTCATCATCTCTCCGAAGCTTCTCATCTCCTCTCCACTCCTCCTCCTCCTCCTCCCCCTCGCCACCTCCCACGCGCTGCCACGCCGGCGACACGACCACTGCCTCCCCCCGCGCGGGCGCGCCAAGCGCCGGGATCCCGCTGCTGCGTTCCAGTTCGCGGCCGGGGCGTAGTAACCACAGCAGTGCAATACACCTTAAAATGGGGTCTACACGATCAAAGAATGAAGATGACAAGGCCATTGTCTTATGCCACGAAAGAAAACGATATGTTAGAGAAGCACTTGATGGAAGATGTGCATTCGCAGCTGCTCACTTCGCTTATATTCAATCACTGAGACACACAGGATTTGCTCTGAGAAAATTTTTGGAGCCTGAAGTGCCAACAGATTCTTCGCTGTACACATCGACATCTGCAACACCAGAACCTCCTACTATTCGGCAGAAATCGAGGAACTTATCTCCATCTATTTCACATCAGGCCAGTGACTCTTTCTCCCCAGTTCCATCCCCTTTATCTTCCGGACGGTTCCGTATCAATCATATGAAATCTGGGGGGAACCCTGTCATGACCATTGAGGAGAAGGTGCCTGTTCCTGTAACAGCAACTCTACAAACATCATCCCTTGTTCCTAAAGCTGTACATGACCTGGATGATAGTTCCACATTTGAAGCACCTCCAGGGACACCACCGTGGGACTACTTTGGCCTTTTTAACCCTGTTGAGAACCAATTTTCATTTCATGACGAGAAGGAGCCTGGTCATGACTTTGAAAACGC   TGATATCAGGCGTCTTCGGGAAAAGGAGGGAATTCCAGAGCTCGAAGAGGAAGGGGAGAAGACTCCTGTGCATCCTGACAATGTTAGGCGCTTCCGTGATGAGAAAACTTCAGATCTCAAAGATGCAGAAAAATCTCCTATCAATGGAAGGGAGGATGATTTTGCAGAGTCAGAAGATGATTTCGATAATCCATCATCTGAACCTTTAGTGAGGGTGTTCCAGAACCGCAATGATATGCCTGTTGAAAATACTGTGATGAATCAGACACCTGAACATGTGGCTTCAGAAAAGTTAGCTTCAGAGAATAGCGTTTCTTTTTCTCGAAAACAGGAGAATAGTGATTCTTTTTCTCGAAAACAGGAGAATAGTGATTCTTTTTCTCGAAAACAGGAGAATAGTGATTCATTTTCTCGAAAACAGGAGAATAGTGATTCTCAAATTGACAGGCCAAACAATGACAAGGAGGTGCTAGACATTAGCATGTTTGAAAGTGATGATGAAAGCCCTGTGGCAAGCCCTGTAAAAGAAGTGAGATCTTCCATTGCTGCTCTTCCTATGAATGGGAAATCAAAAGAACCTTTTCATGACGTTAGAAATGGTGCGAAGGATTTGCATTCATGCATGAAAGAGATTGAAATCTTGTTTATTAGGGCATCAGATTCTGGAAAAGAAGTACCAAGGATGCTTGAAGCAGATAAAGTCAATTTCCGGCCTTTACTGCCTGAAGAAAAAGCACATGGATCAAAAGCATCAGGCTTCTTTGCGACATTCTTTGCTTGCTGCGGTGGGGAGGAAATTCCTATTCCTCAGCCTCCTCCTGAGGCTGAAGTGAAGTACCTTACCTGGCACAGATCAGTTTCTTCACTCTCTTCATCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAATATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATATGCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGCTAGCGGTGCAATTTGTAGGCAATATGACGAAAAATGTAGGCAATTGAGACACCAGGAATCAAAAGCTGAAAGCCAAATGAGTATCGATAGAACCCGTGCTACTGTGAAGGATTTGCACTCCAGAATTATAGTGGCCATTCAGAGAATTGACATGATCTCTAAGAACATTGAGGATCTAAGGGACAAAGAGCTTCAACCACAGTTGGAGGAATTAATTGGGAGTTTAACTCGCATGTGGTCTACAATGCTTGAGTGTCACAAACATCAACGTGAGATTATTAAGTCCAGCAGTGGCAACACGAAGGTCTTAATTCGGTCGGAGTCACAATTTCAAGCAGCTCTACTCCTCCAGGTTGAGCTAAACACTTTATATTCAACCTTCCTGAAATGGATAGCATACCACAGATCGTACTTGCATAGCCTAAATTCATGGCTACTTAAGTGTGTGAAACCACTGAGGGGCAAGAAGAGCTCCAGGAGGAAGAAGGAAGCAGATACTCCCATAACTAAATTTGCTGTTGCACCCATGTTTAAAACCTGTGAAAGCTGGATAAAGTTATTGGATGATTTACCAACCAAGGACTTGGAAGATGCTATCAAAGGCCTCGTGGCAGATATAAACCACTCTGTGCCTCGCCAAGAAAAGCGGCGTGGTACTTCAAAGTTGACTTCCTCATTATCCCGTTCCAGTAGTACCAAGACGATTTCCTCATTTTCTCGGAATGGAGAGTTAAATGGTGAAATGTCAGAGATCCACAGAAATTCCCATACTACGGATTTACAGTCAAGTTTGGAGACATTCCTAGAGGGGTTTGCAGAGTTTTCAGATGTTTCACTGAAGAAGTATATGGAACTCGCGGTTGACATTAACAAAGCAAAGGAACAATATGAGAATGTGAAGTTAAAGAACATGGGAAAGTGAATAAGTTCGACAAAGTCAGACCAAAGGAACTAATTTCTGGAAGGAAGAATGGGCTACAATAACTCAAAGCCATTTAGAAGTGGATAAGTGGATCACCCATGTGTATATTA GCCTGTTTAAACAATAGGTATAAATTACTGTTACTTTTCTTTTTGGGTTCAGTTTGCAAGATAGGTTTAGGTGGGAGAGGAATACTTGTAGATTTCTGGCCAATGCCATGCCGCAGAAGTGTAAATCTGAGGTTTA GGTAAAATTAAA CTGATGGTGGGGGATACAATATGTGTATTTATCCTGGGTATATCATTATATGAGTTTT                             ]
[+] EMBL CB640243             [                                                                             CTCCTCCCCCTCGCCACCTCCCACGCGCTGCCACGCCGGCGACACGACCACTGCCTCCCCCCGCGCGGGCGCGCCAAGCGCCGGGATCCCGCTGCTGCGTTCCAGTTCGCGGCCGGGGCGTAGTAACCACAGCAGTGCAATACACCTTAAAATGGGGTGTACACGATCAAAGAATGAAGATGACAAGGCCATTGTCTTATGCCACGAAAGAAAACGATATGTTAGAGAAGCACTTGATGGAAGATGTGCATTCGCAGCTGCTCACTTCGCTTATATTCAATCACTGAGACACACAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF303316             [                                                                                                                                                                                                                               TTAAAATGGGGTCTACACGATCAAAGAATGAAGATGACAAGGCCATTGTCTTATGCCACGAAAGAAAACGATATGTTAGAGAAGCACTTGATGGAAGATGTGCATTCGCAGCTGCTCACTTCGCTTATATTCAATCACTGAGACACACAGGATTTGCTCTGAGAAAATTTTTGGAGCCTGAAGTGCCAACAGATTCTTCGCTGTACACATCGACATCTGCAACACCAGAACCTCCTACTATTCGGCAGAAATCGAGGAACTTATCTCCATCTATTTCACATCAGGCCAGTGACTCTTTCTCCCCAGTTCCATCCCCTTTATCTTCCGGACGGTTCCGTATCAATCATATGAAATCTGGGGGGAACCCTGTCATGACCATTGAGGAGAAGGTGCCTGTTCCTGTAACAGCAACTCTACAAACATCATCCCTTGTTCCTAAAGCTGTACATGACCTGNATGATAGTTCCACATTTGAAGCACCTCCAGGGACACCACCGTGGGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB678558             [                                                                                                                                                                                                                                                                                                                                                                 TCAATCCCTGAGACACACAGGATTTGCTCTGAGAAAATTTTTGGAGCCTGAAGTGCCAACAGATTCTTCGCTGTACACATCGACATCTGCAACACCAGAACCTCCTACTATTCGGCAGAAATCGAGGAACTTATCTCCATCTATTTCACATCAGGCCAGTGACTCTTTCTCCCCAGTTCCATCCCCTTTATCTTCCGGACGGTTCCGTATCAATCATATGAAATCTGGGGGGAACCCTGTCATGACCATTGAGGAGAAGGTGCCTGTTCCTGTAACAGCAACTCTACAAACATCATCCCTTGTTCCTAAAGCTGTACATGACCTGGATGATAGTTCCACATTTGAAGCACCTCCAGGGACACCACCGTGGGACTACTTTGGCCTTTTTAACCCTGTTGAGAACCAATTTTCATTTCATGACGAGAAGGAGCCTGGTCATGACTTTGAAAACGCTGATGATATCAGGCGTCTTCGGGAAAAGGAGGGAATTCCAGAGCTCGAAGAGGAAGGGGAGAAGACTCCTGTGCATCCTGACAATGTTAGGCGCTTCCGTGATGAGAAAACTTCAGATCTCAAAGATGCAGAAAAATCTCCTATCAATGGAAGGGAGGATGATTTTGCAGAGTCAGAAGATGATTTCGATAATCCATCATCTGAACCTTTAGTGAGGGTGTTCCAGAACCGCAATGATATGCCTGTTGAAAATACTGTGATGAATCAGACACCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB678559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATACTCCCATAACTAAATTTGCTGTTGCACCCATGTTTAACACCTGTGAAAGCTGGATAAAGTTATTGGATGATTTACCAACCAAGGACTTGGAAGATGCTATCAAAGGCCTCGTGGCAGATATAAACCTCTCTGTGCCTCGCCAAGAAAAGCGGCGTGGTACTTCAAAGTTGACTTCTTCATTATCCCGTTCCAGTAGTACCAAGACGATTTCCTCATTTTTTTGGAATGGAGAGTTAAATTGTGAAATGTCAGAGATCCACAGAAATTCCCATATTTCGGATTTACAGTCAAGTTTGGAGACATTCTTAGAGGGGTTTGCAGAGTTTTCAGATGTTTCACTGAAGAAGTATATGGAACTGGCGGTTGACATTAACATAGCAAAGGAACAATATGAGAATGTGAAGTTAAAGAACATGGGAAAGTGAATAAGTTCGACAAAGTCAGACCAAAGGAAGTAATTTCTGGAAGGAAGAATGGGTTACAATAACTCAAAGCCATTTTGAAGTGGATAAGTGGATCACCCATGTGTATATTATGCCTGTTTAAACAATAGGTATAAATTACTGTTACTTTTCTTTTTGGGTTCAGTTTGCAAGATAGGTTTAGGTGGGAGAGGAATACTTGTAGATTTGTGGCCAATGCCATGCCGCAGAAGTGTAAATATGAGGTTTATGGTAAAATTAAATCTGATGGTGGGGGATACAATATGTGTATTTATCCTGGGTATATGATTATAAGAGTTTTCCCTTTTCTTCTCTTTTGAAAAAAAGGGA]
[-] EMBL CF312049             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGTAGTACCAAGACGATTTCCTCATTTTTTCGGAATGGAGAGTTAAATGGTGAAATGTCAGAGATCCACAGAAATTCCCATACTACGGATTTACAGTCAAGTTTGGAGACATTCCTAGAGGGGTTTGCAGAGTTTTCAGATGTTTCACTGAAGAAGTATATGGAACTCGCGGTTGACATTAACAAAGCAAAGGAACAATATGAGAATGTGAAGTTAAAGAACATGGGAAAGTGAATAAGTTCGACAAAGTCAGACCAAAGGAACTAATTTCTGGAAGGAAGAATGGGCTACAATAACTCAAAGCCATTTAGAAGTGGATAAGTGGATCACCCATGTGTATATTA GCCTGTTTAAACAATAGGTATAAATTACTGTTACTTTTCTTTTTGGGTTCAGTTTGCAAGATAGGTTTAGGTGGGAGAGGAATACTTGTAGATTTCTGGCCAATGCCATGCCGCAGAAGTGTAAATCTGAGGTTTA GGTAAAATTAAA CTGATGGTGGGGGATACAATATGTGTATTTATCCTGGGTATATCATTATATGAGTTTTCCCTTTTCTTCTCT    AAAAAAAa   ]
[+] EMBL CA999589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGCGGTTGACATTAACAAAGCAAAGGAACAATATGAGAATGTGAAGTTAAAGAACATGGGAAAGTGAATAAGTTCGACAAAGTCAGACCAAAGGAACTAATTTCTGGAAGGAAGAATGGGCTACAATAACTCAAAGCCATTTAGAAGTGGATAAGTGGATCACCCATGTGTATATTA GCCTGTTTAAACAATAGGTATAAATTACTGTTACTTTTCTTTTTGGGTTC                                                                                                                                                                                           ]




>consensus_12571#0
GCACCGCTCCGCTGCTGCTGCTGCTGCTGCTCATCATCTCTCCGAAGCTTCTCATCTCCT
CTCCACTCCTCCTCCTCCTCCTCCCCCTCGCCACCTCCCACGCGCTGCCACGCCGGCGAC
ACGACCACTGCCTCCCCCCGCGCGGGCGCGCCAAGCGCCGGGATCCCGCTGCTGCGTTCC
AGTTCGCGGCCGGGGCGTAGTAACCACAGCAGTGCAATACACCTTAAAATGGGGTCTACA
CGATCAAAGAATGAAGATGACAAGGCCATTGTCTTATGCCACGAAAGAAAACGATATGTT
AGAGAAGCACTTGATGGAAGATGTGCATTCGCAGCTGCTCACTTCGCTTATATTCAATCA
CTGAGACACACAGGATTTGCTCTGAGAAAATTTTTGGAGCCTGAAGTGCCAACAGATTCT
TCGCTGTACACATCGACATCTGCAACACCAGAACCTCCTACTATTCGGCAGAAATCGAGG
AACTTATCTCCATCTATTTCACATCAGGCCAGTGACTCTTTCTCCCCAGTTCCATCCCCT
TTATCTTCCGGACGGTTCCGTATCAATCATATGAAATCTGGGGGGAACCCTGTCATGACC
ATTGAGGAGAAGGTGCCTGTTCCTGTAACAGCAACTCTACAAACATCATCCCTTGTTCCT
AAAGCTGTACATGACCTGGATGATAGTTCCACATTTGAAGCACCTCCAGGGACACCACCG
TGGGACTACTTTGGCCTTTTTAACCCTGTTGAGAACCAATTTTCATTTCATGACGAGAAG
GAGCCTGGTCATGACTTTGAAAACGCTGATATCAGGCGTCTTCGGGAAAAGGAGGGAATT
CCAGAGCTCGAAGAGGAAGGGGAGAAGACTCCTGTGCATCCTGACAATGTTAGGCGCTTC
CGTGATGAGAAAACTTCAGATCTCAAAGATGCAGAAAAATCTCCTATCAATGGAAGGGAG
GATGATTTTGCAGAGTCAGAAGATGATTTCGATAATCCATCATCTGAACCTTTAGTGAGG
GTGTTCCAGAACCGCAATGATATGCCTGTTGAAAATACTGTGATGAATCAGACACCTGAA
CATGTGGCTTCAGAAAAGTTAGCTTCAGAGAATAGCGTTTCTTTTTCTCGAAAACAGGAG
AATAGTGATTCTTTTTCTCGAAAACAGGAGAATAGTGATTCTTTTTCTCGAAAACAGGAG
AATAGTGATTCATTTTCTCGAAAACAGGAGAATAGTGATTCTCAAATTGACAGGCCAAAC
AATGACAAGGAGGTGCTAGACATTAGCATGTTTGAAAGTGATGATGAAAGCCCTGTGGCA
AGCCCTGTAAAAGAAGTGAGATCTTCCATTGCTGCTCTTCCTATGAATGGGAAATCAAAA
GAACCTTTTCATGACGTTAGAAATGGTGCGAAGGATTTGCATTCATGCATGAAAGAGATT
GAAATCTTGTTTATTAGGGCATCAGATTCTGGAAAAGAAGTACCAAGGATGCTTGAAGCA
GATAAAGTCAATTTCCGGCCTTTACTGCCTGAAGAAAAAGCACATGGATCAAAAGCATCA
GGCTTCTTTGCGACATTCTTTGCTTGCTGCGGTGGGGAGGAAATTCCTATTCCTCAGCCT
CCTCCTGAGGCTGAAGTGAAGTACCTTACCTGGCACAGATCAGTTTCTTCACTCTCTTCA
TCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAAT
ATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATAT
GCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGCTAGCGGTGCAATTTGTAGGCAATAT
GACGAAAAATGTAGGCAATTGAGACACCAGGAATCAAAAGCTGAAAGCCAAATGAGTATC
GATAGAACCCGTGCTACTGTGAAGGATTTGCACTCCAGAATTATAGTGGCCATTCAGAGA
ATTGACATGATCTCTAAGAACATTGAGGATCTAAGGGACAAAGAGCTTCAACCACAGTTG
GAGGAATTAATTGGGAGTTTAACTCGCATGTGGTCTACAATGCTTGAGTGTCACAAACAT
CAACGTGAGATTATTAAGTCCAGCAGTGGCAACACGAAGGTCTTAATTCGGTCGGAGTCA
CAATTTCAAGCAGCTCTACTCCTCCAGGTTGAGCTAAACACTTTATATTCAACCTTCCTG
AAATGGATAGCATACCACAGATCGTACTTGCATAGCCTAAATTCATGGCTACTTAAGTGT
GTGAAACCACTGAGGGGCAAGAAGAGCTCCAGGAGGAAGAAGGAAGCAGATACTCCCATA
ACTAAATTTGCTGTTGCACCCATGTTTAAAACCTGTGAAAGCTGGATAAAGTTATTGGAT
GATTTACCAACCAAGGACTTGGAAGATGCTATCAAAGGCCTCGTGGCAGATATAAACCAC
TCTGTGCCTCGCCAAGAAAAGCGGCGTGGTACTTCAAAGTTGACTTCCTCATTATCCCGT
TCCAGTAGTACCAAGACGATTTCCTCATTTTTTCGGAATGGAGAGTTAAATGGTGAAATG
TCAGAGATCCACAGAAATTCCCATACTACGGATTTACAGTCAAGTTTGGAGACATTCCTA
GAGGGGTTTGCAGAGTTTTCAGATGTTTCACTGAAGAAGTATATGGAACTCGCGGTTGAC
ATTAACAAAGCAAAGGAACAATATGAGAATGTGAAGTTAAAGAACATGGGAAAGTGAATA
AGTTCGACAAAGTCAGACCAAAGGAACTAATTTCTGGAAGGAAGAATGGGCTACAATAAC
TCAAAGCCATTTAGAAGTGGATAAGTGGATCACCCATGTGTATATTAGCCTGTTTAAACA
ATAGGTATAAATTACTGTTACTTTTCTTTTTGGGTTCAGTTTGCAAGATAGGTTTAGGTG
GGAGAGGAATACTTGTAGATTTCTGGCCAATGCCATGCCGCAGAAGTGTAAATCTGAGGT
TTAGGTAAAATTAAACTGATGGTGGGGGATACAATATGTGTATTTATCCTGGGTATATCA
TTATATGAGTTTTCCCTTTTCTTCTCTAAAAAAAGGGA

consensusID : consensus_12571#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 988
fasta sequence 
                              [GTTTCTTCACTCTCTTCATCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAATATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATATGCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGTACTTGTATTTTGGCTGGTCTTGTTACTAAAATATTTACTTTAGTTTATCTGTTCTAGCCAGTTTTTGAAATATTGTAAAGTAGAGAGGTAGCAATGAAGTGTTTTAGGATTGAAACTAGCCTTCTTTTTTTTTC-TTTTTTTTTTTGCAAAAAGGGAAATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAACATGTAATAAATAGGAACTAGCCTTTTTTTTTTTTTGCAAAAAGGGAAATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAATATGTAATAAATGGGACATACGAAAACCTGAATGTATTTGATAGAAGGATTGCGACTCACTATATACAACATGGCAATTGCACAAAGTGCTACTGTAATCATTCCACAGCAACCACTCAGGCTATTTAGGACAATTATGTAAGTAGTGTGAGCCAGTTACATTATTTTCTTATGTACCTACGTAATACAGCCATAAAAAAATTCACTACCGATGCCCACTTATATGTTCATTTTGCACTTTTTATTCCTATTCCCTTCACTTAATTCCTTTGTACTAATGTTCTTGAATAAATAAGCTATATCCATGTATGCTTGCCTTAATCTGTGAATTTCTATGTTGTAAACATAGTTAAATCATATAATGATGGCAAATTTGATGATTTGTTTGAAATGCTAACCTTTATATTGTCTTCAGGCTAGCGGTGCAATTTGTTGGCAATATGACGAANAATGTAGGCNATTGAGACACCAGGAATCAAAGCTGAGAGCCAAATGAGTATCGATAGAACCCGGTGTCTCGGCCT]

[+] EMBL CF303608             [GTTTCTTCACTCTCTTCATCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAATATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATATGCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGTACTTGTATTTTGGCTGGTCTTGTTACTAAAATATTTACTTTAGTTTATCTGTTCTAGCCAGTTTTTGAAATATTGTAAAGTAGAGAGGTAGCAATGAAGTGTTTTAGGATTGAAACTAGCCTTCTTTTTTTTTC TTTTTTTTTTTGCAAAAAGGGAAATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAACATGTAATAAATAGGAACTAGCCTTTTTTTTTTTTTGCAAAAAGGGAAATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAATATGTAATAAATGGGACATACGAAAACCTGAATGTATTTGATAGAAGGATTGCGACTCACTATATACAACATGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA761324             [                                                                                                                                                                                                                                                                                                                TTCTTTTTTTTTTTTGCAAAAAGGGAAATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAACATGTAATAAATAGGAACTAGCC  TTTTTTTTTTTGCAAAAAGGGAAATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAATATGTAATAAATGGGACATATGAAAACCTGAATGTATTTGATAGAAGGATTGCGACTCACTATATACAACATGGCAATTGCACAAAGTGCTACTGTAATCATTCCACAGCAACCACTCAGGCTATTTAGGACAATTATGTAAGTAGTGTGAGCCAGTTACATTATTTTCTTATGTACCTACGTAATACAGCCATAAAAAAATTCACTACCGATGCCCACTTATATGTTCATTTTGCACTTTTTATTCCTATTCCCTTCACTTAATTCCTTTGTACTAATGTTCTTGAATAAATAAGCTATATCCATGTATGCTTGCCTTAATCTGTGAATTTCTATGTTGTAAACATAGTTAAATCATATAATGATGGCAAATTTGATGATTTGTTTGAAATGCTAACCTTTATATTGTCTTCAGGCTAGCGGTGCAATTTGTTGGCAATATGACGAANAATGTAGGCNATTGAGACACCAGGAATCAAAGCTGAGAGCCAAATGAGTATCGATAGAACCCGGTGTCTCGGCCT]
[+] EMBL CF312048             [                                                                                                                                                                                                                                                                                                                 TC TTTTTTTTTTTGCAAAAAGGGAAATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAACATGTAATAAATAGGAACTAGCCTTTTTTTTTTTTTGCAAAAAGGGAAATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAATATGTAATAAATGGGACATACGAAAACCTGAATGTATTTGATAGAAGGATTGCGACTCACTATATACAACATGGCAATTGCACAAAGTGCTACTGTAATCATTCCACAGCAACCACTCAGGCTATTTAGGACAATTATGTAAGTAGTGTGAGCCAGTTACATTATTTTCTTATGTACCTGCGTAATACAGCCATAAAAAAATTCACTACCGATGCCCACTTATATGTTCATTTTGCACTTTTTATTCCTATTCCCTTCACTTAATTCCTTTGTACTAATGTTCTTGAATAAATAAGCTATATCCGTGTATGTTTGCCTTAATCTGTGAATTTCTATGTTGTAAACATAGTTAAATCATATAATGATGGCAAATTTGATGATTTGTTTGAAATGCT                                                                                                                                 ]




>consensus_12571#1
GTTTCTTCACTCTCTTCATCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCT
GATGGTCTCACTGGAAATATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCA
ACACTAGATAGATTATATGCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGTACTTGTA
TTTTGGCTGGTCTTGTTACTAAAATATTTACTTTAGTTTATCTGTTCTAGCCAGTTTTTG
AAATATTGTAAAGTAGAGAGGTAGCAATGAAGTGTTTTAGGATTGAAACTAGCCTTCTTT
TTTTTTCTTTTTTTTTTTGCAAAAAGGGAAATAAGATCGATTTTGAACTAATTAAAACAG
AACCTACCTAGAACATGTAATAAATAGGAACTAGCCTTTTTTTTTTTTTGCAAAAAGGGA
AATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAATATGTAATAAATGGGA
CATACGAAAACCTGAATGTATTTGATAGAAGGATTGCGACTCACTATATACAACATGGCA
ATTGCACAAAGTGCTACTGTAATCATTCCACAGCAACCACTCAGGCTATTTAGGACAATT
ATGTAAGTAGTGTGAGCCAGTTACATTATTTTCTTATGTACCTACGTAATACAGCCATAA
AAAAATTCACTACCGATGCCCACTTATATGTTCATTTTGCACTTTTTATTCCTATTCCCT
TCACTTAATTCCTTTGTACTAATGTTCTTGAATAAATAAGCTATATCCATGTATGCTTGC
CTTAATCTGTGAATTTCTATGTTGTAAACATAGTTAAATCATATAATGATGGCAAATTTG
ATGATTTGTTTGAAATGCTAACCTTTATATTGTCTTCAGGCTAGCGGTGCAATTTGTTGG
CAATATGACGAANAATGTAGGCNATTGAGACACCAGGAATCAAAGCTGAGAGCCAAATGA
GTATCGATAGAACCCGGTGTCTCGGCCT

consensusID : consensus_12571#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 728
fasta sequence 
                              [ACATGGATCAAAAGCATCAGGCTTCTTTGCGACATTCTTTGCTTGCTGCGGTGGGGAGGAAATTCCTATTCCTCAGCCTCCTCCTGAGGCTGAAGTGAAGTACCTTACCTGGCACAGATCAGTTTCTTCACTCTCTTCATCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAATATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATATGCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGCTAGCGGTGCAATTTGTAGGCAATATGACGAAAAATGTAGGCAATTGAGACACCAGGAATCAAAAGCTGAAAGCCAAATGAGTATCGATAGAACCCGTGCTACTGTGAAGGATTTGCACTCCAGAATTATAGTGGCCATTCAGAGAATTGACATGATCTCTAAGAACATTGAGGATCTAGGGGNACAAGAGCTTCACCACAGTGGGAAGAATTANTNGGAGTTACTCGCATGTTGTCTACAATGCCTGAGTGTCACAACATCACGTGAGAATATTAGTCAGCATGGCACAGAAGGTCTATTCNGGTNGAGTACATTTCAGCAGCTTATCTCTCAGGTGAACCTACACTTATTAACCGGCCCGAGAGGTAATTCCTCCATATCTTTCGTCCTTCCTATGGTGGCACTATGTGTCACCTAGCATAGNCTGAATAATG]

[+] EMBL CA753901             [ACATGGATCAAAAGCATCAGGCTTCTTTGCGACATTCTTTGCTTGCTGCGGTGGGGAGGAAATTCCTATTCCTCAGCCTCCTCCTGAGGCTGAAGTGAAGTACCTTACCTGGCACAGATCAGTTTCTTCACTCTCTTCATCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAATATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATATGCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGCTAGCGGTGCAATTTGTAGGCAATATGACGAAAAATGTAGGCAATTGAGACACCAGGAATCAAAAGCTGAAAGCCAAATGAGTATCGATAGAACCCGTGCTACTGTGAAGGATTTGCACTCCAGAATTATAGTGGCCATTCAGAGAATTGACATGATCTCTAAGAACATTGAGGATCTAGGGGNACAAGAGCTTCACCACAGTGGGAAGAATTANTNGGAGTTACTCGCATGTTGTCTACAATGCCTGAGTGTCACAACATCACGTGAGAATATTAGTCAGCATGGCACAGAAGGTCTATTCNGGTNGAGTACATTTCAGCAGCTTATCTCTCAGGTGAACCTACACTTATTAACCGGCCCGAGAGGTAATTCCTCCATATCTTTCGTCCTTCCTATGGTGGCACTATGTGTCACCTAGCATAGNCTGAATAATG]




>consensus_12571#2
ACATGGATCAAAAGCATCAGGCTTCTTTGCGACATTCTTTGCTTGCTGCGGTGGGGAGGA
AATTCCTATTCCTCAGCCTCCTCCTGAGGCTGAAGTGAAGTACCTTACCTGGCACAGATC
AGTTTCTTCACTCTCTTCATCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGC
TGATGGTCTCACTGGAAATATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTC
AACACTAGATAGATTATATGCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGCTAGCGG
TGCAATTTGTAGGCAATATGACGAAAAATGTAGGCAATTGAGACACCAGGAATCAAAAGC
TGAAAGCCAAATGAGTATCGATAGAACCCGTGCTACTGTGAAGGATTTGCACTCCAGAAT
TATAGTGGCCATTCAGAGAATTGACATGATCTCTAAGAACATTGAGGATCTAGGGGNACA
AGAGCTTCACCACAGTGGGAAGAATTANTNGGAGTTACTCGCATGTTGTCTACAATGCCT
GAGTGTCACAACATCACGTGAGAATATTAGTCAGCATGGCACAGAAGGTCTATTCNGGTN
GAGTACATTTCAGCAGCTTATCTCTCAGGTGAACCTACACTTATTAACCGGCCCGAGAGG
TAATTCCTCCATATCTTTCGTCCTTCCTATGGTGGCACTATGTGTCACCTAGCATAGNCT
GAATAATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12571#0      GCACCGCTCCGCTGCTGCTGCTGCTGCTGCTCATCATCTCTCCGAAGCTTCTCATCTCCT 60
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      CTCCACTCCTCCTCCTCCTCCTCCCCCTCGCCACCTCCCACGCGCTGCCACGCCGGCGAC 120
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      ACGACCACTGCCTCCCCCCGCGCGGGCGCGCCAAGCGCCGGGATCCCGCTGCTGCGTTCC 180
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      AGTTCGCGGCCGGGGCGTAGTAACCACAGCAGTGCAATACACCTTAAAATGGGGTCTACA 240
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      CGATCAAAGAATGAAGATGACAAGGCCATTGTCTTATGCCACGAAAGAAAACGATATGTT 300
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      AGAGAAGCACTTGATGGAAGATGTGCATTCGCAGCTGCTCACTTCGCTTATATTCAATCA 360
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      CTGAGACACACAGGATTTGCTCTGAGAAAATTTTTGGAGCCTGAAGTGCCAACAGATTCT 420
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      TCGCTGTACACATCGACATCTGCAACACCAGAACCTCCTACTATTCGGCAGAAATCGAGG 480
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      AACTTATCTCCATCTATTTCACATCAGGCCAGTGACTCTTTCTCCCCAGTTCCATCCCCT 540
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      TTATCTTCCGGACGGTTCCGTATCAATCATATGAAATCTGGGGGGAACCCTGTCATGACC 600
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      ATTGAGGAGAAGGTGCCTGTTCCTGTAACAGCAACTCTACAAACATCATCCCTTGTTCCT 660
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      AAAGCTGTACATGACCTGGATGATAGTTCCACATTTGAAGCACCTCCAGGGACACCACCG 720
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      TGGGACTACTTTGGCCTTTTTAACCCTGTTGAGAACCAATTTTCATTTCATGACGAGAAG 780
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GAGCCTGGTCATGACTTTGAAAACGCTGATATCAGGCGTCTTCGGGAAAAGGAGGGAATT 840
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      CCAGAGCTCGAAGAGGAAGGGGAGAAGACTCCTGTGCATCCTGACAATGTTAGGCGCTTC 900
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      CGTGATGAGAAAACTTCAGATCTCAAAGATGCAGAAAAATCTCCTATCAATGGAAGGGAG 960
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GATGATTTTGCAGAGTCAGAAGATGATTTCGATAATCCATCATCTGAACCTTTAGTGAGG 1020
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GTGTTCCAGAACCGCAATGATATGCCTGTTGAAAATACTGTGATGAATCAGACACCTGAA 1080
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      CATGTGGCTTCAGAAAAGTTAGCTTCAGAGAATAGCGTTTCTTTTTCTCGAAAACAGGAG 1140
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      AATAGTGATTCTTTTTCTCGAAAACAGGAGAATAGTGATTCTTTTTCTCGAAAACAGGAG 1200
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      AATAGTGATTCATTTTCTCGAAAACAGGAGAATAGTGATTCTCAAATTGACAGGCCAAAC 1260
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      AATGACAAGGAGGTGCTAGACATTAGCATGTTTGAAAGTGATGATGAAAGCCCTGTGGCA 1320
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      AGCCCTGTAAAAGAAGTGAGATCTTCCATTGCTGCTCTTCCTATGAATGGGAAATCAAAA 1380
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GAACCTTTTCATGACGTTAGAAATGGTGCGAAGGATTTGCATTCATGCATGAAAGAGATT 1440
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GAAATCTTGTTTATTAGGGCATCAGATTCTGGAAAAGAAGTACCAAGGATGCTTGAAGCA 1500
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GATAAAGTCAATTTCCGGCCTTTACTGCCTGAAGAAAAAGCACATGGATCAAAAGCATCA 1560
consensus_12571#2      -----------------------------------------ACATGGATCAAAAGCATCA 19
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GGCTTCTTTGCGACATTCTTTGCTTGCTGCGGTGGGGAGGAAATTCCTATTCCTCAGCCT 1620
consensus_12571#2      GGCTTCTTTGCGACATTCTTTGCTTGCTGCGGTGGGGAGGAAATTCCTATTCCTCAGCCT 79
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      CCTCCTGAGGCTGAAGTGAAGTACCTTACCTGGCACAGATCAGTTTCTTCACTCTCTTCA 1680
consensus_12571#2      CCTCCTGAGGCTGAAGTGAAGTACCTTACCTGGCACAGATCAGTTTCTTCACTCTCTTCA 139
consensus_12571#1      ------------------------------------------GTTTCTTCACTCTCTTCA 18
                                                                 ******************

consensus_12571#0      TCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAAT 1740
consensus_12571#2      TCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAAT 199
consensus_12571#1      TCATCTAGAATTCCTCTTGGGGTGACTTCAAAAGATGATGCTGATGGTCTCACTGGAAAT 78
                       ************************************************************

consensus_12571#0      ATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATAT 1800
consensus_12571#2      ATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATAT 259
consensus_12571#1      ATCTTTAGTGGTGTATACATGAATTCTGGCAGTCACGCTTCAACACTAGATAGATTATAT 138
                       ************************************************************

consensus_12571#0      GCATGGGAGAGAAAGCTTTATGATGAAGTTAAGG--CTAGCGGTGCAATTTGTA--GGCA 1856
consensus_12571#2      GCATGGGAGAGAAAGCTTTATGATGAAGTTAAGG--CTAGCGGTGCAATTTGTA--GGCA 315
consensus_12571#1      GCATGGGAGAGAAAGCTTTATGATGAAGTTAAGGTACTTGTATTTTGGCTGGTCTTGTTA 198
                       **********************************  ** *   *     * **   *  *

consensus_12571#0      ATATGACGAAAAATGTAGGCAATTGAGAC--ACCAGGAATCAAAA-GCTGAAAGCCAAAT 1913
consensus_12571#2      ATATGACGAAAAATGTAGGCAATTGAGAC--ACCAGGAATCAAAA-GCTGAAAGCCAAAT 372
consensus_12571#1      CTAAAATATTTACTTTAGTTTATCTGTTCTAGCCAGTTTTTGAAATATTGTAAAGTAGAG 258
                        **  *     * * ***   **     *   ****   *  ***   ** **   * * 

consensus_12571#0      GAGTATCGATAGAACCCGTGCTACTGTGAAGGATTTGCACTCCAGAATTATAGTGGCCAT 1973
consensus_12571#2      GAGTATCGATAGAACCCGTGCTACTGTGAAGGATTTGCACTCCAGAATTATAGTGGCCAT 432
consensus_12571#1      AGGTAGCAATGAAG--TGTTTTAGGATTGAA-ACTAGCCTTCTTTTTTTTTCTTTTTTTT 315
                         *** * **  *    **  **   *  *  * * **  **     ** *  *     *

consensus_12571#0      TCAGAGAATTGACATGATCTCTAAGAACATTGAGGATCTAAGGGACAAAGAGCTTCAACC 2033
consensus_12571#2      TCAGAGAATTGACATGATCTCTAAGAACATTGAGGATCTAGGGGNACAAGAGCTTCA-CC 491
consensus_12571#1      TTTGCAAAAAGGGAAA-----TAAGATCGATTTTGAACTAATTAAAACAGAACCT-ACCT 369
                       *  *  **  *  *       ***** *  *   ** ***        *** * * * * 

consensus_12571#0      ACAGTTGGAGGAATTAATTGGGAGTTTAACTCGCATGTGGTCTACAATGCTTGAGTGTCA 2093
consensus_12571#2      ACAGTGGGAAGAATTANTNGG-AGTT--ACTCGCATGTTGTCTACAATGCCTGAGTGTCA 548
consensus_12571#1      AGAACATG--TAATAAATAGG------AACTAGCCTTTTTTTTTTTTTGCAAAAAGGGAA 421
                       * *    *   *** * * **       *** ** * *  * *    ***   *  *  *

consensus_12571#0      CAAACATCAACGTGAGATTATTAAGTCCAGCAGTGGCAACACGAAGGTCTTAATTCGGTC 2153
consensus_12571#2      CAA-CATCA-CGTGAGAATATTAG--TCAGCA-TGGCA-CA-GAAGGTCT--ATTCNGGT 599
consensus_12571#1      ATAAGATCGATTTTGAACTAATTAAAACAGAACCTACCTAGAATATGTAATAAATGGGAC 481
                         *  ***    *   * ** *     *** *    *       * **    * *  *  

consensus_12571#0      GGAGTCACAATTTCAAGCAGCTCTAC----TCCTCCAGGTTGAGCTAAACA-CTTTATAT 2208
consensus_12571#2      NGAGT-ACA--TTTCAGCAGCTTA------TCTCTCAGGTGAACCTA--CA-CTT----A 643
consensus_12571#1      ATACGAAAACCTGAATGTATTTGATAGAAGGATTGCGACTCACTATATACAACATGGCAA 541
                         *   * *  *    * *  *             *   *     **  ** * *     

consensus_12571#0      TCAACCTTCCTGAAATGGATAGCATACCACAGATCGTACTTGCATAGCCTAAATTCATGG 2268
consensus_12571#2      TTAACCGGCCCGAGA--GGTAAT-TCCTCCATATCTTTCGTCCTT--CCTA---TGGTGG 695
consensus_12571#1      TTGCACAAAGTGCTACTGTAATCATTCCACAGCAACCACTCAGGCTATTTA---GGACAA 598
                       *    *     *  *  *  *   * *  **       *          **         

consensus_12571#0      CTACTTAAGT-GTGTGAAACCACTGAGGGGCAAGAAGAGCTCCAGGAGGAAGAAGGAAGC 2327
consensus_12571#2      C-ACT---AT-GTGTCACCTAGCATAGNCTGAATAATG---------------------- 728
consensus_12571#1      TTATGTAAGTAGTGTGAGCCAGTTACATTATTTTCTTATGTACCTACGTAATACAGCCAT 658
                         *      * **** *                                           

consensus_12571#0      AGATACTCCCATAACTAAATTTGCTGTTGCACCCATGTTTAAAACCTGTGAAAGCTGGAT 2387
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      AAAAAAATTCACTACCGA-TGCCCACTTATATGTTCATTTTGCACTTTTTATTCCTAT-T 716
                                                                                   

consensus_12571#0      AAAGTTATTGGATGATTTACCAACCAAGGACTTGGAAGATGCTATCAAAGGCCTCGTGGC 2447
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      CCCTTCACTTAATTCCTTTGTACTAATGTTCTTGAATAAATAAGCTATATCCATGTATGC 776
                                                                                   

consensus_12571#0      AGATATAAACCACTCTGTGCCTCGCCAAGAAAAGCGGCGTGGTACTTCAAAGTTGACTTC 2507
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      TTGCCTTAATCTGTGAATTTCTATGTTGTAAACATAGTTAAATCATATAATGATGGCAAA 836
                                                                                   

consensus_12571#0      CTCATTATCCCGTTCCAGTAGTACCAAGACGATTTCCTCATTTTTTCGGAATGGAGAGTT 2567
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      TTTGATGATTTGTTT--GAAATGCTAACCTTTATATTGTCTTCAGGCTAGCGGTGCAATT 894
                                                                                   

consensus_12571#0      AAATGGTGAAATGTCAGAGATCCACAGAAATTCCCATACTACGGATTTACAGTCAAGTTT 2627
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      TGTTGGCAATATGACGAANAATGTAGGCNATTGAGACACCAGGAATCAAAGCTGAGAGCC 954
                                                                                   

consensus_12571#0      GGAGACATTCCTAGAGGGGTTTGCAGAGTTTTCAGATGTTTCACTGAAGAAGTATATGGA 2687
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      AAATGAGTATCGATAGAACCCGGTGTCTCGGCCT-------------------------- 988
                                                                                   

consensus_12571#0      ACTCGCGGTTGACATTAACAAAGCAAAGGAACAATATGAGAATGTGAAGTTAAAGAACAT 2747
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GGGAAAGTGAATAAGTTCGACAAAGTCAGACCAAAGGAACTAATTTCTGGAAGGAAGAAT 2807
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GGGCTACAATAACTCAAAGCCATTTAGAAGTGGATAAGTGGATCACCCATGTGTATATTA 2867
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GCCTGTTTAAACAATAGGTATAAATTACTGTTACTTTTCTTTTTGGGTTCAGTTTGCAAG 2927
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      ATAGGTTTAGGTGGGAGAGGAATACTTGTAGATTTCTGGCCAATGCCATGCCGCAGAAGT 2987
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      GTAAATCTGAGGTTTAGGTAAAATTAAACTGATGGTGGGGGATACAATATGTGTATTTAT 3047
consensus_12571#2      ------------------------------------------------------------
consensus_12571#1      ------------------------------------------------------------
                                                                                   

consensus_12571#0      CCTGGGTATATCATTATATGAGTTTTCCCTTTTCTTCTCTAAAAAAAGGGA 3098
consensus_12571#2      ---------------------------------------------------
consensus_12571#1      ---------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)