cluster # 12585

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Oryza sativa
cluster # 12585 cluster # 12585 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12585#0 length = 1417 sequences # 10

consensus_12585#1 length = 477 sequences # 1

consensusID : consensus_12585#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1417
fasta sequence

                              [CTGTTCGTCTCTTCCTTAGCATACTGTGTGCATAAGTGAAGAGGGGAAGGGGGAGCCAGGCATCTTCGAGCCTAGGAGCTCAATCTGTTTTTGATTGTTGCAGATGGAATACCCAAGGACACTCACTTCCTGACCGCTCAAATATCCCATCCATTCCATGCTCTGATGTGAGCAACTCGGTTCCAAGAATCTTGGAAACATGGGGAAAATTCCCGGATCAGCAGTCGCCATGGCCACGCCGCCGGAGCCGTCGTCTTGGCTGAGCCTCAAGGTGTTCTTCCTGAGGGTGAGCAGGTGCGAGGTGAACGAGTCCATGCTGGATTCTGTGACCGTCACCCACGCCCCGCTCACCCCGGACACCGTGCTCGAGGTGAGCGGCGGCAGCGTCGCCAGCAACGGCCACGTGTCGCTCCGCCTGGACCGCGCCGGCGGCGTCGGCGCCGCCGCCACGGAGGGCGGCGACTCCTGCACCTTCGTCAGCACGGCGGACGTCAGGGTGTCCGGGAGCGCGCGGTTCGACGTCCAGTGCGGAGGCGAGCGGCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGATGAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGCGAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTTCACGAGGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCCCATCCCGGAGCACGGCGAGCCGGCGGAGGACTCCAAAGAAACGCTGCATCCGAAGCATGAAACCGAGGTGTCGGAGTACAGGTGCTACAAGCCGGAGCAGGACGCCGGCGACGCCGACTACGACGGCTTCTACGTGAAGCCTGCAGGCGAGGAAGACGACGACGGCGATTTCTCGTGGTTCACCGCCGGCGTCAGAGTCGGCGTCGGCATCAGCGTAGGCATCTGCCTCGGCATCGGCATCGGCGCCGGCCTCCTGGCCCGTTCGTACCACTCTACGTCGAGGAGCCTGAGAAGCCGGCTGATCTCGAGTCTGTTCTGAACATCAACATTGCATCAAGATCACTGTCCATCTCAAAATTCAGATATCCCTCTGTTGGAGATGGACTAGTCCAGTGTGTGTGTATATATCCTTGTTAGTATAGTTGTTACTACCGTCGTAGATAGATGAGATGTACTATCTTTGGCACTGTTGGTTCACTGGTTTATACTTATATGATCAGGCATTGTCAAATTGAGACCCTTTCATATCTACCCAGATCGATCAATCGATGTCATTGATCACTAGTGCATCTAGTCTAGAGCCCTATGTTGTTAGACTAATTTCATTTGAAGATTGCACAAGTCTATTCCGCAAAAA]

[+] EMBL AK059414             [CTGTTCGTCTCTTCCTTAGCATACTGTGTGCATAAGTGAAGAGGGGAAGGGGGAGCCAGGCATCTTCGAGCCTAGGAGCTCAATCTGTTTTTGATTGTTGCAGATGGAATACCCAAGGACACTCACTTCCTGACCGCTCAAATATCCCATCCATTCCATGCTCTGATGTGAGCAACTCGGTTCCAAGAATCTTGGAAACATGGGGAAAATTCCCGGATCAGCAGTCGCCATGGCCACGCCGCCGGAGCCGTCGTCTTGGCTGAGCCTCAAGGTGTTCTTCCTGAGGGTGAGCAGGTGCGAGGTGAACGAGTCCATGCTGGATTCTGTGACCGTCACCCACGCCCCGCTCACCCCGGACACCGTGCTCGAGGTGAGCGGCGGCAGCGTCGCCAGCAACGGCCACGTGTCGCTCCGCCTGGACCGCGCCGGCGGCGTCGGCGCCGCCGCCACGGAGGGCGGCGACTCCTGCACCTTCGTCAGCACGGCGGACGTCAGGGTGTCCGGGAGCGCGCGGTTCGACGTCCAGTGCAGAGGCGAGCGGCTCGTCGTCGGGATCCTGGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGATGAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGCGAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTTCACGAGGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCCCATCCCGGAGCACGGCGAGCCGGCGGAGGACTCCAAAGAAACGCTGCCTCCGAAGCATGAAACCGAGGTGTCGGAGTACAGGTGCTACAAGCCGGAGCAGGACGCCGGCGACGCCGACTACGACGGCTTCTACGTGAAGCCTGCAGGCGAGGAAGACGACGACGGCGATTTCTCGTGGTTCACCGCCGGCGTCAGAGTCGGCGTCGGCATCAGCGTAGGCATCTGCCTCGGCATCGGCATCGGCGCCGGCCTCCTGGCCCGTTCGTACCACTCTACGTCGAGGAGCCTGAGAAGCCGGCTGATCTCGAGTCTGTTCTGAACATCAACATTGCATCAAGATCACTGTCCATCTCAAAATTCAGATATCCCTCTGTTGGAGATGGACTAGTCCAGTGTGTGTGTATATATCCTTGTTAGTATAGTTGTTACTACCGTCGTAGATAGATGAGATGTGCTATCTTTGGCACTGTTGGTTCACTGGTTTATACTTATATGATCAGGCATTGTCAAATTGAG                                                                                                                         ]
[+] EMBL CB620751             [                                              AAGGCGTAGAAAGGCATCTTCGAGCCTAGGAGCTCAATCTGTTTTTGATTGTTGCAGATGGAATACCCAAGGACACTCACTTCCTGACCGCTCAAATATCCCATCCATTCCATGCTCTGATGTGAGCAACTCGGTTCCAAGAATCTTGGAAACATGGGGAAAATTCCCGGATCAGCAGTCGCCATGGCCACGCCGCCGGAGCCGTCGTCTTGGCTGAGCCTCAAGGTGTTCTTCCTGAGGGTGAGCAGGTGCGAGGTGAACGAGTCCATGCTGGATTCTGTGACCGTCACCCACGCCCCGCTCACCCCGGACACCGTGCTCGAGGTGAGCGGCGGCAGCGTCGCCAGCAACGGCCACGTGTCGCTCCGCCTGGACCGCGCCGGCGGCGTCGGCGCCGCCGCCACGGAGGGCGGCGACTCCTGCACCTTCGTCAGCACGGCGGACGTCAGGGTGTCCGGGAGCGCGCGGTTCGACGTCCAGTGCGGAGGCGAGCGGCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGATGAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGCGAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTTCACGAAGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCCCATCCCGGAGCACGGCGAGCCGGCGGAGGACTCC AAGAAACGCTGCATCCGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB618225             [                                                                   GAGCCTAGGAGCTCAATCTGTTTTTGATTGTTGCAGATGGAATACCCAAGGACACTCACTTCCTGACCGCTCAAATATCCCATCCATTCCATGCTCTGATGTGAGCAACTCGGTTCCAAGAATCTTGGAAACATGGGGAAAATTCCCGGATCAGCAGTCGCCATGGCCACGCCGCCGGAGCCGTCGTCTTGGCTGAGCCTCAAGGTGTTCTTCCTGAGGGTGAGCAGGTGCGAGGTGAACGAGTCCATGCTGGATTCTGTGACCGTCACCCACGCCCCGCTCACCCCGGACACCGTGCTCGAGGTGAGCGGCGGCAGCGTCGCCAGCAACGGCCACGTGTCGCTCCGCCTGGACCGCGCCGGCGGCGTCGGCGCCGCCGCCACGGAGGGCGGCGACTCCTGCACCTTCGTCAGCACGGCGGACGTCAGGGTGTCCGGGAGCGCGCGGTTCGACGTCCAGTGCGGAGGCGAGCGGCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGATGAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGCGAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTTCACGAGGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCCCATCCCGGAGCACGGCGAGCCGGCGGAGGACTCCAAAGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB624019             [                                                                   GAGCCCCTTAGCTCAATCTGTTTTTGATTGTTGCAGATGGAATACCCAAGGACACTCACTTCATGACCGCTCAAATATCCCATCCATTCCATGCTCTGATGTGAGCAACTCGGTTCCAAGAATCTTGGAAACATGGGGAAAATTCCCGGATCAGCAATCGCCATGGCCACACCGCCGGAGCCGTCGTCTTGGCTGAGCCTCAAGGAGTTCTTCCTGAAGGTGAGCAGGTGCGAGGCGAACCAATCCATGCTGGATTCTGTGACCGTCACCCACGCCCCGCTCACCCCGGACACCGTGCTCGAGGAGAGCGGCGGCAACGTCGCCAGCAACGGCCACGTGTCGCTCCGCCTGGACCGCGCCGGCGGCGTCGGCGCCGCCGCCACGGAGGGCGGCGACTCCTGCACCTTCGTCAGCACGGCGGACGTCAGGGTGTCCGGGAGCGCGCGGTTCCACGTCCAGTGCGGACGCGAGCGGCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGAGATGAAGTGCCAGGTCGCGGCGCAGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU173940             [                                                                                                                CCAAGGACACTCACTTCCTGACCGCTCAAATATCCCATCCATTCCATGCTCTGATGTGAGCAACTCGGTTCCAAGAATCTTGGAAACATGGGGAAAATTCCCGGATCAGCAGTCGCCATGGCCACGCCGCCGGAGCCGTCGTCTTGGCTGAGCCTCAAGGTGTTCTTCCTGAGGGTGAGCAGGTGCGAGGTGAACGAGTCCATGCTGGATTCTGTGACCGTCACCCACGCCCCGCTCACCCCGGACACCGTGCTCGAGGTGAGCGGCGGCAGCGTCGCCAGCAACGGCCACGTGTCGCTCCGCCTGGACCGCGCCGGCGGCGTCGGCGCCGCCGCCACGGAGGGCGGCGACTCCTGCACCTTCGTCAGCACGGNGGACGTCAGGGTGTCCGGGAGCGCGCGGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB621619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACGTCAGGGTGTCCGGGAGCGCGCGGTTCGACGTCCAGTGCGGAGGCGAGCGGCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGATGAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGCGAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTTCACGAGGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCCCATCCCGGAGCACGGCGAGCCGGCGGAGGACTCCAAAGAAACGCTGCATCCGAAGCATGAAACCGAGGTGTCGGAGTACAGGTGCTACAAGCCGGAGCAGGACGCCGGCGACGCCGACTACGACGGCTTCTACGTGAAGCCTGCAGGCGAGGAAGACGACGACGGCGATTTCTCGTGGTTCACCGCCGGCGTCAGAGTCGGCGTCGGCATCAGCGTAGGCATCTGCCTCGGCATCGGCATCGGCGCCGGCCTCCTGGCCCGTTCGTACCACTCTACGTCGAGGAGCCTGAGAAGCCGGCTGATCTCGAGTCTGTTCTGAACATCAACATTGCATCAAGATCACTGTCCATCTCAAAATTCAGATATCCCTCTGTTGGAGATGGACTAGTCCAGTGTGTGTGTATATATCCTTGTTAGTATAGTTGTTACTACCGTCGTAGATAGATGAGATGTACTATCTTTGGCACTGTTGGTTCACTGGTTTATACTTATATGATCAGGCATTGTCAAATTGAGACCCTTTCAaaaaaaaag                                                                                                       ]
[-] EMBL CB618226             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTCGACGTCCAGTGCGGAGGCGAGCGGCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGATGAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGCGAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTTCACGAGGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCCCATCCCGGAGCACGGCGAGCCGGCGGAGGACTCCAAAGAAACGCTGCATCCGAAGCATGAAACCGAGGTGTCGGAGTACAGGTGCTACAAGCCGGAGCAGGACGCCGGCGACGCCGACTACGACGGCTTCTACGTGAAGCCTGCAGGCGAGGAAGACGACGACGGCGATTTCTCGTGGTTCACCGCCGGCGTCAGAGTCGGCGTCGGCATCAGCGTAGGCATCTGCCTCGGCATCGGCATCGGCGCCGGCCTCCTGGCCCGTTCGTACCACTCTACGTCGAGGAGCCTGAGAAGCCGGCTGATCTCGAGTCTGTTCTGAACATCAACATTGCATCAAGATCACTGTCCATCTCAAAATTCAGATATCCCTCTGTTGGAGATGGACTAGTCCAGTGTGTGTGTATATATCCTTGTTAGTATAGTTGTTACTACCGTCGTAGATAGATGAGATGTACTATCTTTGGCACTGTTGGTTCACTGGTTTATACTTATATGATCAGGCATTGTCAAATTGAGACCCTTTCATATCTACCCAGATCGATCAATCGATGTCATTGATCA                                                                            ]
[-] EMBL CB624020             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGGAGGCGAGCGGCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGATGAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGCGAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTTCACGAGGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCCCATCCCGGAGCACGGCGAGCCGGCGGAGGACTCCAAAGAAACGCTGCATCCGAAGCATGAAACCGAGGTGTCGGAGTACAGGTGCTACAAGCCGGAGCAGGACGCCGGCGACGCCGACTACGACGGCTTCTACGTGAAGCCTGCAGGCGAGGAAGACGACGACGGCGATTTCTCGTGGTTCACCGCCGGCGTCAGAGTCGGCGTCGGCATCAGCGTAGGCATCTGCCTCGGCATCGGCATCGGCGCCGGCCTCCTGGCCCGTTCGTACCACTCTACGTCGAGGAGCCTGAGAAGCCGGCTGATCTCGAGTCTGTTCTGAACATCAACATTGCATCAAGATCACTGTCCATCTCAAAATTCAGATATCCCTCTGTTGGAGATGGACTAGTCCAGTGTGTGTGTATATATCCTTGTTAGTATAGTTGTTACTACCGTCGTAGATAGATGAGATGTACTATCTTTGGCACTGTTGGTTCACTGGTTTATACTTATATGATCAGGCATTGTCAAATTGAGACCCTTTCATATCTACCCAGATCGATCAATCGATATCGTTGATCA                                                                            ]
[-] EMBL CB620752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAGGCGAGCGGCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGATGAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGCGAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTTCACGAGGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCCCATCCCGGAGCACGGCGAGCCGGCGGAGGACTCCAAAGAAACGCTGCATCCGAAGCATGAAACCGAGGTGTCGGAGTACAGGTGCTACAAGCCGGAGCAGGACGCCGGCGACGCCGACTACGACGGCTTCTACGTGAAGCCTGCAGGCGAGGAAGACGACGACGGCGATTTCTCGTGGTTCACCGCCGGCGTCAGAGTCGGCGTCGGCATCAGCGTAGGCATCTGCCTCGGCATCGGCATCGGCGCCGGCCTCCTGGCCCGTTCGTACCACTCTACGTCGAGGAGCCTGAGAAGCCGGCTGATCTCGAGTCTGTTCTGAACATCAACATTGCATCAAGATCACTGTCCATCTCAAAATTCAGATATCCCTCTGTTGGAGATGGACTAGTCCAGTGTGTGTGTATATATCCTTGTTAGTATAGTTGTTACTACCGTCGTAGATAGATGAGATGTACTATCTTTGGCACTGTTGGATGACTGGTTTATACTTATATG                                                                                                                                              ]
[+] EMBL AU057028             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGTGTGTATATATCCTTGTTAGTATAGTTGTTACTACCGTCGTAGATAGATGAGATGTGCTATCTTTGGCACTGTTGGTTCACTGGTTTATACTTATATGATCAGGCATTGTCAAATTGAGACCCTTTCATATCTACCCAGATCGATCAATCGATGTCATTGATCACTAGTGCATCTAGTCTAGAGCCCTATGTTGTTAGACTAATTTCATTTGAAGATTGCACAAGTCTATTCCGCAAAAA]




>consensus_12585#0
CTGTTCGTCTCTTCCTTAGCATACTGTGTGCATAAGTGAAGAGGGGAAGGGGGAGCCAGG
CATCTTCGAGCCTAGGAGCTCAATCTGTTTTTGATTGTTGCAGATGGAATACCCAAGGAC
ACTCACTTCCTGACCGCTCAAATATCCCATCCATTCCATGCTCTGATGTGAGCAACTCGG
TTCCAAGAATCTTGGAAACATGGGGAAAATTCCCGGATCAGCAGTCGCCATGGCCACGCC
GCCGGAGCCGTCGTCTTGGCTGAGCCTCAAGGTGTTCTTCCTGAGGGTGAGCAGGTGCGA
GGTGAACGAGTCCATGCTGGATTCTGTGACCGTCACCCACGCCCCGCTCACCCCGGACAC
CGTGCTCGAGGTGAGCGGCGGCAGCGTCGCCAGCAACGGCCACGTGTCGCTCCGCCTGGA
CCGCGCCGGCGGCGTCGGCGCCGCCGCCACGGAGGGCGGCGACTCCTGCACCTTCGTCAG
CACGGCGGACGTCAGGGTGTCCGGGAGCGCGCGGTTCGACGTCCAGTGCGGAGGCGAGCG
GCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGAT
GAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGC
GAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTT
CACGAGGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCC
CATCCCGGAGCACGGCGAGCCGGCGGAGGACTCCAAAGAAACGCTGCATCCGAAGCATGA
AACCGAGGTGTCGGAGTACAGGTGCTACAAGCCGGAGCAGGACGCCGGCGACGCCGACTA
CGACGGCTTCTACGTGAAGCCTGCAGGCGAGGAAGACGACGACGGCGATTTCTCGTGGTT
CACCGCCGGCGTCAGAGTCGGCGTCGGCATCAGCGTAGGCATCTGCCTCGGCATCGGCAT
CGGCGCCGGCCTCCTGGCCCGTTCGTACCACTCTACGTCGAGGAGCCTGAGAAGCCGGCT
GATCTCGAGTCTGTTCTGAACATCAACATTGCATCAAGATCACTGTCCATCTCAAAATTC
AGATATCCCTCTGTTGGAGATGGACTAGTCCAGTGTGTGTGTATATATCCTTGTTAGTAT
AGTTGTTACTACCGTCGTAGATAGATGAGATGTACTATCTTTGGCACTGTTGGTTCACTG
GTTTATACTTATATGATCAGGCATTGTCAAATTGAGACCCTTTCATATCTACCCAGATCG
ATCAATCGATGTCATTGATCACTAGTGCATCTAGTCTAGAGCCCTATGTTGTTAGACTAA
TTTCATTTGAAGATTGCACAAGTCTATTCCGCAAAAA

consensusID : consensus_12585#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 477
fasta sequence

                              [AGCCTTAACACTGCATCCTAATAAGTTCTTGAGTTGTTTGCGAGTTTGATTTGCTTTTGTTAAAGAATTTCTAGTTATGATTCTTATCATTGGGGAAAAAAATTCTTCCATTTATGTCCTGTATGCAGAATTCATCGTAGTTCTTGAGAAGTATCCGGTATCTGTATGTATTTCATATTCAGAATTTAGCAAGGTGTTCGTCCAAGAATCTATCTTCTGCTCCTATGTTTTGTATGAATAGGTCATAGGTTTTCATTTTCATCCGTCATGTCCTATGTAGAATTCATAATACATGAGCAGTATCAGTGTCAATGACTTGCACAGTTGTGCTCGGCTGAAAAATTTGTCATATGGTGCAGTTCATCACAGATGCCTAAAATCCTTCCATTTTAACACCTTTTCTTTAGTTTTTGATTGTTGCAGATGGAATACCCAAGGACACTCACTTCCTGACCCGCTCAATATCCCATCCATTCC]

[+] EMBL CB621618             [AGCCTTAACACTGCATCCTAATAAGTTCTTGAGTTGTTTGCGAGTTTGATTTGCTTTTGTTAAAGAATTTCTAGTTATGATTCTTATCATTGGGGAAAAAAATTCTTCCATTTATGTCCTGTATGCAGAATTCATCGTAGTTCTTGAGAAGTATCCGGTATCTGTATGTATTTCATATTCAGAATTTAGCAAGGTGTTCGTCCAAGAATCTATCTTCTGCTCCTATGTTTTGTATGAATAGGTCATAGGTTTTCATTTTCATCCGTCATGTCCTATGTAGAATTCATAATACATGAGCAGTATCAGTGTCAATGACTTGCACAGTTGTGCTCGGCTGAAAAATTTGTCATATGGTGCAGTTCATCACAGATGCCTAAAATCCTTCCATTTTAACACCTTTTCTTTAGTTTTTGATTGTTGCAGATGGAATACCCAAGGACACTCACTTCCTGACCCGCTCAATATCCCATCCATTCC]




>consensus_12585#1
AGCCTTAACACTGCATCCTAATAAGTTCTTGAGTTGTTTGCGAGTTTGATTTGCTTTTGT
TAAAGAATTTCTAGTTATGATTCTTATCATTGGGGAAAAAAATTCTTCCATTTATGTCCT
GTATGCAGAATTCATCGTAGTTCTTGAGAAGTATCCGGTATCTGTATGTATTTCATATTC
AGAATTTAGCAAGGTGTTCGTCCAAGAATCTATCTTCTGCTCCTATGTTTTGTATGAATA
GGTCATAGGTTTTCATTTTCATCCGTCATGTCCTATGTAGAATTCATAATACATGAGCAG
TATCAGTGTCAATGACTTGCACAGTTGTGCTCGGCTGAAAAATTTGTCATATGGTGCAGT
TCATCACAGATGCCTAAAATCCTTCCATTTTAACACCTTTTCTTTAGTTTTTGATTGTTG
CAGATGGAATACCCAAGGACACTCACTTCCTGACCCGCTCAATATCCCATCCATTCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12585#0      CTGTTCGTCTCTTCCTTAGCATACTGTGTGCATAAGTGAAGAGGGGAAGGGGGAGCCAGG 60
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      CATCTTCGAGCCTAGGAGCTCAATCTGTTTTTGATTGTTGCAGATGGAATACCCAAGGAC 120
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      ACTCACTTCCTGACCGCTCAAATATCCCATCCATTCCATGCTCTGATGTGAGCAACTCGG 180
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      TTCCAAGAATCTTGGAAACATGGGGAAAATTCCCGGATCAGCAGTCGCCATGGCCACGCC 240
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      GCCGGAGCCGTCGTCTTGGCTGAGCCTCAAGGTGTTCTTCCTGAGGGTGAGCAGGTGCGA 300
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      GGTGAACGAGTCCATGCTGGATTCTGTGACCGTCACCCACGCCCCGCTCACCCCGGACAC 360
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      CGTGCTCGAGGTGAGCGGCGGCAGCGTCGCCAGCAACGGCCACGTGTCGCTCCGCCTGGA 420
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      CCGCGCCGGCGGCGTCGGCGCCGCCGCCACGGAGGGCGGCGACTCCTGCACCTTCGTCAG 480
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      CACGGCGGACGTCAGGGTGTCCGGGAGCGCGCGGTTCGACGTCCAGTGCGGAGGCGAGCG 540
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      GCTCGTCGTCGGGATCCTCGACACGCGCGACGCCGGCGCTGGCGGCGGCGGCTGGGTGAT 600
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      GAAGTGCCAGGTCGCGGCGCAGCGCGGGTCGGGCCTCGTGAGGCGCGGTAGCAAGGAGGC 660
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      GAAGCCGCCGGTGGTGGAGGTGTACGTCGCCGGCCTGGCCCGCGGCGCGCCGGTCGTCTT 720
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      CACGAGGGCGATGCAGCTGCGGTTCAGGAGGCGGCGCCACGTCAAGGCCTTCATGGAGCC 780
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      CATCCCGGAGCACGGCGAGCCGGCGGAGGACTCCAAAGAAACGCTGCATCCGAAGCATGA 840
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      AACCGAGGTGTCGGAGTACAGGTGCTACAAGCCGGAGCAGGACGCCGGCGACGCCGACTA 900
consensus_12585#1      ------------------------------------------------------------
                                                                                   

consensus_12585#0      CGACGGCTTCTACGTGAAGCCTGCAGGCGAGGAAGACGACGACGGCGATTTCTCGTGGTT 960
consensus_12585#1      ----------AGCCTTAACACTGCATCCTAATAAGTTCTTGA--GTTGTTTG-CGAGTTT 47
                                   * * **  *****  * *  ***     **  *   ***  ** * **

consensus_12585#0      CACC-GCCGGCGTCAGAGTCGGCGTCGGCATCAGCGTAGGCATCTGCCTCGGCATCGGCA 1019
consensus_12585#1      GATTTGCTTTTGTTAAAGAATTTCTAGTTATGATTCTTATCAT-----TGGGGAAAAAAA 102
                        *   **    ** * **      * *  ** *   *   ***     * ** *     *

consensus_12585#0      TCGGCGCCGGCCTCCTGGCCCGTTCGTACCACTCTACGTCGAGGAGCCTGAGAAGCCGGC 1079
consensus_12585#1      TTCTTCCA---TTTATGTCCTGTATGCAGAATTC---ATCGTAGTTCTTGAGAAGT-ATC 155
                       *     *     *  ** ** **  * *  * **    ***  *  * *******    *

consensus_12585#0      TGATCTCGAGTCTGTTCTGAACATCAACATTGCATCAAGATCACTGTCCATCTCAAAATT 1139
consensus_12585#1      CGGTATCT-GTATGTATTTCATATTCAGAATTTAGCAAGGT----GTTCGTCCAAGAATC 210
                        * * **  ** ***  *  * **  * * *  * **** *    ** * **  * *** 

consensus_12585#0      CAGAT---ATCCCTCTGTTGGAGATGGACTAGTCCAGTGTGTGTGTATATATCCTTGTTA 1196
consensus_12585#1      TATCTTCTGCTCCTATGTTTTGTATGAATAGGTCATAGGTTTTCATTTTCATCCGTCATG 270
                        *  *      *** ****    *** *   ***    ** *   * *  **** *  * 

consensus_12585#0      GTATAGTTGTTACTACCGTCGTAGATAGATGAGAT--GTACTA-TCTTTGGCACTGTTGG 1253
consensus_12585#1      TCCTA--TGTAGAATTCATAATACATGAGCAGTATCAGTGTCAATGACTTGCACAGTTG- 327
                          **  ***      * *  ** **       **  **   * *   * **** **** 

consensus_12585#0      TTCACTGGTTTATACTTATATGATCAGGCATTGTCAAATTGAGACCCTTTCATATCTACC 1313
consensus_12585#1      -TGCTCGGCTGAAAAATTTGTCATATGGTGCAGTTCATCACAGATGCCTAAA-ATCCTTC 385
                        *    ** * * *  * * * **  **    **  *    ***  * *  * ***   *

consensus_12585#0      CAGATCGAT-CAATCGATGTCATTGATCACTAGTGCATCTAGTCTAGAGCCCTATGTTGT 1372
consensus_12585#1      CATTTTAACACCTTTTCTTTAGTTTTTGATTGTTGCAGATGGAATA---CCCAAGGACAC 442
                       **  *  *  *  *   * *  **  * * *  ****  * *  **   *** * *    

consensus_12585#0      TAGACTAATTTCATTTGAAGATTGCACAAGTCTATTCCGCAAAAA 1417
consensus_12585#1      TCACTT--CCTGACCCGCTCAATATCCCA-TCCATTCC------- 477
                       *    *    * *   *   * *   * * ** *****