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Oryza sativa
cluster # 12588 cluster # 12588       Sequences # 11       consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12588#0 length = 3416 sequences # 1  
consensus_12588#1 length = 690 sequences # 2  
 consensus_12588#2 length = 619 sequences # 1  
consensus_12588#3 length = 589 sequences # 5  
consensus_12588#4 length = 442 sequences # 2  
consensusID : consensus_12588#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3416
fasta sequence 
                              [GGCCAACTGGGGACTTGTCTTCCGAATTTCTATCTTTTGCCAGATCACCACGGCATGCCTCTTCCTCCTCCACTTCAACTACCGTGCCATCCGAAGCTACTCCAGATGCCATTCGACCAAGAAGATCAGCCCGGAATCCATGGCGTGATGCTCTCTTCTGACCACTGCGGGCTGTACCCTCTGCCGGCGCTTCCGTTAAGCAACTCCGCCGCCGCCGCCGCCGCAACCGTCGCATTGGGGAAGCACAGTGCAGCCGCCGGTTCCATGCCCAATATTGGCGGCGCTGAGGAGGTGGCCACCACTGTAACCAAAGCTGGCAATGAGAGTACTACTTGCAATGGCTCCACTACATGGTGGAGGGGCTCGACGATGGCGGCGATGGGGGAGAAGGGGAAGATGAAGATCAGGAGGAAGATGAGGGAGCCGAGGTTCTGCTTCCAGACCAGAAGCGAAGTGGATGTGCTGGATGACGGGTACAAGTGGAGGAAGTACGGACAGAAGGTTGTCAAGAACAGTCTCCATCCCAGGTACATATGCTCAACTTAACCAAAACCCTACATATTTGATTTCTTATATCATTTATACATATGTGTAGATAATAGATTCCCCGTTTCTTATCAATTAACTAATTATAAACATAAACAGAAGAATGTCTCGATGCCTATTTAATTTGGTTAATTAGTAATACGCAAGTTTATATATACCAGATAAAATATCAATTTTATATGTACAGAACTGAGCCATGTTGATCTTGTTTTTTCTCCTAAAGGGCTTCTTCAGAACATGGAAAATTTGTAGGATTTTCACAGGAAACATTTCAATTTCTCCCAAATTCTCGTGAAATTCCTCCCAACCCAATATACCAAGGGTACTCTCTATGGCAGAAGAGAATTAATGCATGCCTGGTTAAACTAACTTGTCAACAAAGGTCTTGATATGAATAGATTAGAAGCTGATTTAAGACAAGGCAAAATATCTACAAATATAATTATATATATGCAGGCTAGATTATTACTTTTCCTTTTTATATCAATATAGTTAAAAGCGATTTTACAGTACTTAAGAGATGTTAGGAGGTGCCACCGTTTTTAATGTAAATTCTGGTACCTCTGTAATTAGTATTTAAGGTACTACCAAGTCTTTACAATAGAAAATATGGTATCTCTTAACAAGGGAAATGTAAAATTCCTCATTTAATTTGGTATGTGCTTATCTATTAGCTCTGTACTTATGATATATATGTTTATTTTGCTTCTACCTACAATCGAAATAAACGCAGCTACTCCTATAACATATTGCTGTCCAATTATATGATCCATATGTCAAAAGTGTTCGCCAGTATATGGAAAAGTTTCACACACTTGTCATCAGATGACCCTTGCAAATAATCTTAATTATGTACTAGTTAATTAAGGTCCAAGAATTAATGGGTATTTTAATTAAATGGGGGTTCACTTTGTTATAACAATGAAAATAATCTATTGAGCTGAATCTGACAGGCTCACCTTCTGCACAGTTTTATTAAAAAAATATTTTTAATGCAAATTGTTACATTTTGGTGAACAAGCTTAATTAGTTACTAGTTACATTTCGGTGACAAGTTTAACAAACTCATCATACATAACTAGCCGTATCAGTTCTTTAATTTATGATAGGTACTGTCATCCCTGATGCAGATAAAGGGACGGGTCATAAATAGATTAAGGATCGAGTTCTTACCACAAATATTCTGAATATGCATGTATGAGAAGGAGTCTTGGGGTAATTAATTAAGGTATAACGGATCCTAATATGGGCACCATGAAAGAGAGGACCCTAAATTTGCCAAACTAAGGACGATGCATGCCATTCTACACACTCATACAACACAAGTAGTGTAAGCCTTAGCTATTTCATGCGATAAAATAAACGGCAATTAGCAGCCAATTAACATAGGCACAAAAGGTACATTAATAAGAAAGATGCTTCAGTTCCCAATTCATACATCCGTTTGTGAGAAGCTGTGTTAGGAGTATACTGCACTGTATCTGGCATCTTATATATCTATGTATAATGTTCATATAATGATACTATTTCTTTATCTCATTAAACCATATCACCTCAATTGTCTTTGACACTTAGATGATTAATTTATGGTCCAAATTATTTTTATCATTTTCTTTCTCATACGAAGTTATATCACCTTAGTTTTGTCTTTAGATGATTAATCTATATTATTTCTCCTTTTTTTTATTTTGTCGTTGAGGCATATCACCTTAGTTTTACTTTTTAATGATCAATTTATATATGATTTAAATTATTAAAAATCACGCCATCTAAACTATTTTTAACTTTTTTCATGGTCGATCAAAGATGAAAATTATATAAAATTACGTCATCCGTCATCTAGCTATTTTTACATGTTATTTGTTCTATTATTATACAGAACTTCCGCTGCGATGCGCGGGCCCAATCTAACTCCCATCTCCTTGCAGAACTCGATCGATAAAAATTAATTAATGTTGTCAATTAGCTAATTACGTCGCATGCGGGAGTCATCGCACGGCCAAATATCTAAAAAAACATGTAATAGTCCTTTCATTTCAGTAAATAAACACATCTATATTTTTTTAATCTATATATTAGATTGAGAAATGGAAATTGGTTAGTCAGTACTCCCTCCGTCCCCTAGTATAAGGGATAGACTAGTACTCCATCCGTTTCATAATGTAAGTCATTCTAGCATTTTCTACATTTATATTGATGTTAATGAATCTAGACATATATATCTATCTAGATTCATTAACATCAATATGAATGTGGGAAATATTAGAATGACTTACATGGTGAAACGGAGGAAGTATATAGGAGGACACCATGAATATAACTCTCTGGTTTTGCGGAGCTTCTGATCTGTTGGAGATCAGAACTACAAACAGGCATTTTTGTGTGATTTGGATGTACACATGCCAAAACTGATCGACGATATATATATGAATGCGCATATGCATGCATGCAGGAGCTACTTCAGGTGCACGCACAGCAACTGCCGCGTGAAGAAGCGGGTGGAGCGGCTGTCGACGGACTGCCGCATGGTGATCACCACCTACGAGGGCCGCCACACGCACTCCCCCTGCGACGACAACTCCTCCGGCGAGCACACCAACTGCTTCAGCTCCTTCTGAAGATTTTAGCACTTTGCATTTTCGTCGTTGATCCATCCATCAATATATATACCGTCGTATACCTATATGTCCACCGTTTGATCGATTAACTGTGGCTAGCTCTAGCTCTCTTTCATTTTGATGGTTGAGATATATAGGCGACGTAATATCGAGCCATGCCTGCGCAATGTACCAGTACTGCTAGCTATACGTGAGATGTATTGCGTGCATGCACGTACAATTTACAAGCAGCAGTCAATAAATTAAGCTATG]

[+] EMBL AK072906             [GGCCAACTGGGGACTTGTCTTCCGAATTTCTATCTTTTGCCAGATCACCACGGCATGCCTCTTCCTCCTCCACTTCAACTACCGTGCCATCCGAAGCTACTCCAGATGCCATTCGACCAAGAAGATCAGCCCGGAATCCATGGCGTGATGCTCTCTTCTGACCACTGCGGGCTGTACCCTCTGCCGGCGCTTCCGTTAAGCAACTCCGCCGCCGCCGCCGCCGCAACCGTCGCATTGGGGAAGCACAGTGCAGCCGCCGGTTCCATGCCCAATATTGGCGGCGCTGAGGAGGTGGCCACCACTGTAACCAAAGCTGGCAATGAGAGTACTACTTGCAATGGCTCCACTACATGGTGGAGGGGCTCGACGATGGCGGCGATGGGGGAGAAGGGGAAGATGAAGATCAGGAGGAAGATGAGGGAGCCGAGGTTCTGCTTCCAGACCAGAAGCGAAGTGGATGTGCTGGATGACGGGTACAAGTGGAGGAAGTACGGACAGAAGGTTGTCAAGAACAGTCTCCATCCCAGGTACATATGCTCAACTTAACCAAAACCCTACATATTTGATTTCTTATATCATTTATACATATGTGTAGATAATAGATTCCCCGTTTCTTATCAATTAACTAATTATAAACATAAACAGAAGAATGTCTCGATGCCTATTTAATTTGGTTAATTAGTAATACGCAAGTTTATATATACCAGATAAAATATCAATTTTATATGTACAGAACTGAGCCATGTTGATCTTGTTTTTTCTCCTAAAGGGCTTCTTCAGAACATGGAAAATTTGTAGGATTTTCACAGGAAACATTTCAATTTCTCCCAAATTCTCGTGAAATTCCTCCCAACCCAATATACCAAGGGTACTCTCTATGGCAGAAGAGAATTAATGCATGCCTGGTTAAACTAACTTGTCAACAAAGGTCTTGATATGAATAGATTAGAAGCTGATTTAAGACAAGGCAAAATATCTACAAATATAATTATATATATGCAGGCTAGATTATTACTTTTCCTTTTTATATCAATATAGTTAAAAGCGATTTTACAGTACTTAAGAGATGTTAGGAGGTGCCACCGTTTTTAATGTAAATTCTGGTACCTCTGTAATTAGTATTTAAGGTACTACCAAGTCTTTACAATAGAAAATATGGTATCTCTTAACAAGGGAAATGTAAAATTCCTCATTTAATTTGGTATGTGCTTATCTATTAGCTCTGTACTTATGATATATATGTTTATTTTGCTTCTACCTACAATCGAAATAAACGCAGCTACTCCTATAACATATTGCTGTCCAATTATATGATCCATATGTCAAAAGTGTTCGCCAGTATATGGAAAAGTTTCACACACTTGTCATCAGATGACCCTTGCAAATAATCTTAATTATGTACTAGTTAATTAAGGTCCAAGAATTAATGGGTATTTTAATTAAATGGGGGTTCACTTTGTTATAACAATGAAAATAATCTATTGAGCTGAATCTGACAGGCTCACCTTCTGCACAGTTTTATTAAAAAAATATTTTTAATGCAAATTGTTACATTTTGGTGAACAAGCTTAATTAGTTACTAGTTACATTTCGGTGACAAGTTTAACAAACTCATCATACATAACTAGCCGTATCAGTTCTTTAATTTATGATAGGTACTGTCATCCCTGATGCAGATAAAGGGACGGGTCATAAATAGATTAAGGATCGAGTTCTTACCACAAATATTCTGAATATGCATGTATGAGAAGGAGTCTTGGGGTAATTAATTAAGGTATAACGGATCCTAATATGGGCACCATGAAAGAGAGGACCCTAAATTTGCCAAACTAAGGACGATGCATGCCATTCTACACACTCATACAACACAAGTAGTGTAAGCCTTAGCTATTTCATGCGATAAAATAAACGGCAATTAGCAGCCAATTAACATAGGCACAAAAGGTACATTAATAAGAAAGATGCTTCAGTTCCCAATTCATACATCCGTTTGTGAGAAGCTGTGTTAGGAGTATACTGCACTGTATCTGGCATCTTATATATCTATGTATAATGTTCATATAATGATACTATTTCTTTATCTCATTAAACCATATCACCTCAATTGTCTTTGACACTTAGATGATTAATTTATGGTCCAAATTATTTTTATCATTTTCTTTCTCATACGAAGTTATATCACCTTAGTTTTGTCTTTAGATGATTAATCTATATTATTTCTCCTTTTTTTTATTTTGTCGTTGAGGCATATCACCTTAGTTTTACTTTTTAATGATCAATTTATATATGATTTAAATTATTAAAAATCACGCCATCTAAACTATTTTTAACTTTTTTCATGGTCGATCAAAGATGAAAATTATATAAAATTACGTCATCCGTCATCTAGCTATTTTTACATGTTATTTGTTCTATTATTATACAGAACTTCCGCTGCGATGCGCGGGCCCAATCTAACTCCCATCTCCTTGCAGAACTCGATCGATAAAAATTAATTAATGTTGTCAATTAGCTAATTACGTCGCATGCGGGAGTCATCGCACGGCCAAATATCTAAAAAAACATGTAATAGTCCTTTCATTTCAGTAAATAAACACATCTATATTTTTTTAATCTATATATTAGATTGAGAAATGGAAATTGGTTAGTCAGTACTCCCTCCGTCCCCTAGTATAAGGGATAGACTAGTACTCCATCCGTTTCATAATGTAAGTCATTCTAGCATTTTCTACATTTATATTGATGTTAATGAATCTAGACATATATATCTATCTAGATTCATTAACATCAATATGAATGTGGGAAATATTAGAATGACTTACATGGTGAAACGGAGGAAGTATATAGGAGGACACCATGAATATAACTCTCTGGTTTTGCGGAGCTTCTGATCTGTTGGAGATCAGAACTACAAACAGGCATTTTTGTGTGATTTGGATGTACACATGCCAAAACTGATCGACGATATATATATGAATGCGCATATGCATGCATGCAGGAGCTACTTCAGGTGCACGCACAGCAACTGCCGCGTGAAGAAGCGGGTGGAGCGGCTGTCGACGGACTGCCGCATGGTGATCACCACCTACGAGGGCCGCCACACGCACTCCCCCTGCGACGACAACTCCTCCGGCGAGCACACCAACTGCTTCAGCTCCTTCTGAAGATTTTAGCACTTTGCATTTTCGTCGTTGATCCATCCATCAATATATATACCGTCGTATACCTATATGTCCACCGTTTGATCGATTAACTGTGGCTAGCTCTAGCTCTCTTTCATTTTGATGGTTGAGATATATAGGCGACGTAATATCGAGCCATGCCTGCGCAATGTACCAGTACTGCTAGCTATACGTGAGATGTATTGCGTGCATGCACGTACAATTTACAAGCAGCAGTCAATAAATTAAGCTATG]




>consensus_12588#0
GGCCAACTGGGGACTTGTCTTCCGAATTTCTATCTTTTGCCAGATCACCACGGCATGCCT
CTTCCTCCTCCACTTCAACTACCGTGCCATCCGAAGCTACTCCAGATGCCATTCGACCAA
GAAGATCAGCCCGGAATCCATGGCGTGATGCTCTCTTCTGACCACTGCGGGCTGTACCCT
CTGCCGGCGCTTCCGTTAAGCAACTCCGCCGCCGCCGCCGCCGCAACCGTCGCATTGGGG
AAGCACAGTGCAGCCGCCGGTTCCATGCCCAATATTGGCGGCGCTGAGGAGGTGGCCACC
ACTGTAACCAAAGCTGGCAATGAGAGTACTACTTGCAATGGCTCCACTACATGGTGGAGG
GGCTCGACGATGGCGGCGATGGGGGAGAAGGGGAAGATGAAGATCAGGAGGAAGATGAGG
GAGCCGAGGTTCTGCTTCCAGACCAGAAGCGAAGTGGATGTGCTGGATGACGGGTACAAG
TGGAGGAAGTACGGACAGAAGGTTGTCAAGAACAGTCTCCATCCCAGGTACATATGCTCA
ACTTAACCAAAACCCTACATATTTGATTTCTTATATCATTTATACATATGTGTAGATAAT
AGATTCCCCGTTTCTTATCAATTAACTAATTATAAACATAAACAGAAGAATGTCTCGATG
CCTATTTAATTTGGTTAATTAGTAATACGCAAGTTTATATATACCAGATAAAATATCAAT
TTTATATGTACAGAACTGAGCCATGTTGATCTTGTTTTTTCTCCTAAAGGGCTTCTTCAG
AACATGGAAAATTTGTAGGATTTTCACAGGAAACATTTCAATTTCTCCCAAATTCTCGTG
AAATTCCTCCCAACCCAATATACCAAGGGTACTCTCTATGGCAGAAGAGAATTAATGCAT
GCCTGGTTAAACTAACTTGTCAACAAAGGTCTTGATATGAATAGATTAGAAGCTGATTTA
AGACAAGGCAAAATATCTACAAATATAATTATATATATGCAGGCTAGATTATTACTTTTC
CTTTTTATATCAATATAGTTAAAAGCGATTTTACAGTACTTAAGAGATGTTAGGAGGTGC
CACCGTTTTTAATGTAAATTCTGGTACCTCTGTAATTAGTATTTAAGGTACTACCAAGTC
TTTACAATAGAAAATATGGTATCTCTTAACAAGGGAAATGTAAAATTCCTCATTTAATTT
GGTATGTGCTTATCTATTAGCTCTGTACTTATGATATATATGTTTATTTTGCTTCTACCT
ACAATCGAAATAAACGCAGCTACTCCTATAACATATTGCTGTCCAATTATATGATCCATA
TGTCAAAAGTGTTCGCCAGTATATGGAAAAGTTTCACACACTTGTCATCAGATGACCCTT
GCAAATAATCTTAATTATGTACTAGTTAATTAAGGTCCAAGAATTAATGGGTATTTTAAT
TAAATGGGGGTTCACTTTGTTATAACAATGAAAATAATCTATTGAGCTGAATCTGACAGG
CTCACCTTCTGCACAGTTTTATTAAAAAAATATTTTTAATGCAAATTGTTACATTTTGGT
GAACAAGCTTAATTAGTTACTAGTTACATTTCGGTGACAAGTTTAACAAACTCATCATAC
ATAACTAGCCGTATCAGTTCTTTAATTTATGATAGGTACTGTCATCCCTGATGCAGATAA
AGGGACGGGTCATAAATAGATTAAGGATCGAGTTCTTACCACAAATATTCTGAATATGCA
TGTATGAGAAGGAGTCTTGGGGTAATTAATTAAGGTATAACGGATCCTAATATGGGCACC
ATGAAAGAGAGGACCCTAAATTTGCCAAACTAAGGACGATGCATGCCATTCTACACACTC
ATACAACACAAGTAGTGTAAGCCTTAGCTATTTCATGCGATAAAATAAACGGCAATTAGC
AGCCAATTAACATAGGCACAAAAGGTACATTAATAAGAAAGATGCTTCAGTTCCCAATTC
ATACATCCGTTTGTGAGAAGCTGTGTTAGGAGTATACTGCACTGTATCTGGCATCTTATA
TATCTATGTATAATGTTCATATAATGATACTATTTCTTTATCTCATTAAACCATATCACC
TCAATTGTCTTTGACACTTAGATGATTAATTTATGGTCCAAATTATTTTTATCATTTTCT
TTCTCATACGAAGTTATATCACCTTAGTTTTGTCTTTAGATGATTAATCTATATTATTTC
TCCTTTTTTTTATTTTGTCGTTGAGGCATATCACCTTAGTTTTACTTTTTAATGATCAAT
TTATATATGATTTAAATTATTAAAAATCACGCCATCTAAACTATTTTTAACTTTTTTCAT
GGTCGATCAAAGATGAAAATTATATAAAATTACGTCATCCGTCATCTAGCTATTTTTACA
TGTTATTTGTTCTATTATTATACAGAACTTCCGCTGCGATGCGCGGGCCCAATCTAACTC
CCATCTCCTTGCAGAACTCGATCGATAAAAATTAATTAATGTTGTCAATTAGCTAATTAC
GTCGCATGCGGGAGTCATCGCACGGCCAAATATCTAAAAAAACATGTAATAGTCCTTTCA
TTTCAGTAAATAAACACATCTATATTTTTTTAATCTATATATTAGATTGAGAAATGGAAA
TTGGTTAGTCAGTACTCCCTCCGTCCCCTAGTATAAGGGATAGACTAGTACTCCATCCGT
TTCATAATGTAAGTCATTCTAGCATTTTCTACATTTATATTGATGTTAATGAATCTAGAC
ATATATATCTATCTAGATTCATTAACATCAATATGAATGTGGGAAATATTAGAATGACTT
ACATGGTGAAACGGAGGAAGTATATAGGAGGACACCATGAATATAACTCTCTGGTTTTGC
GGAGCTTCTGATCTGTTGGAGATCAGAACTACAAACAGGCATTTTTGTGTGATTTGGATG
TACACATGCCAAAACTGATCGACGATATATATATGAATGCGCATATGCATGCATGCAGGA
GCTACTTCAGGTGCACGCACAGCAACTGCCGCGTGAAGAAGCGGGTGGAGCGGCTGTCGA
CGGACTGCCGCATGGTGATCACCACCTACGAGGGCCGCCACACGCACTCCCCCTGCGACG
ACAACTCCTCCGGCGAGCACACCAACTGCTTCAGCTCCTTCTGAAGATTTTAGCACTTTG
CATTTTCGTCGTTGATCCATCCATCAATATATATACCGTCGTATACCTATATGTCCACCG
TTTGATCGATTAACTGTGGCTAGCTCTAGCTCTCTTTCATTTTGATGGTTGAGATATATA
GGCGACGTAATATCGAGCCATGCCTGCGCAATGTACCAGTACTGCTAGCTATACGTGAGA
TGTATTGCGTGCATGCACGTACAATTTACAAGCAGCAGTCAATAAATTAAGCTATG

consensusID : consensus_12588#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 690
fasta sequence 
                              [TTTTTAACACATAGAAATATATAAAAACATTATTGCGTCACACTGCAGCTTCCATTGGTCGTAGGATAGGTTGTAGTACACGCAGATCGATCGGGATATTGCATATAAGCATATTTGCATGGCTCTCAAACATGCAAATAAATATTTTATTTCAACTGTATCTTAAGTTGTACTCCCTCCGTTTTCATAATGTAAGTCATTCTAGCATTTTTTACATTTATATTGATGTTAATGAATCTAGACATATATATCTATATAGATTCATTAACATCAATATGAATGTGGGAAATACTAAAATGATTAAAATGATTTACATTGTGAAACGGAGGAAGTAGAAG-AAACTCTGTAGGTACGAT-AACTAAAAAATACTGAATTCCTTCTGTTTCTTTTTATATGATGTTGGTTGATTAGAAGTAAAGTAATAACCAACGCCTTACAGCTTATAATCATGGCACAGTAGTACGCGATGGGCATGGATATTGGCCTGGATTGCAGGTCGGATACGGAGTCGGAAGCTG-CCACTTTGAAGCAACACCCTCGCGGCGGAGGCCATCGCCGGCGCCTTCAGCAGCGCCGCCGCCAAGACGAATAGCATCATGACGAGCACCGCCGNCAGGCCGCCGGCCGCCCGGTGGTCCCTGANCGCCAACGGCATCGGCGATCCTNCGATGACTGGANTTTGTCACGGAT]

[-] EMBL AU075662             [TTTTTAACACATAGAAATATATAAAAACATTATTGCGTCACACTGCAGCTTCCATTGGTCGTAGGATAGGTTGTAGTACACGCAGATCGATCGGGATATTGCATATAAGCATATTTGCATGGCTCTCAAACATGCAAATAAATATTTTATTTCAACTGTATCTTAAGTTGTACTCCCTCCGTTTTCATAATGTAAGTCATTCTAGCATTTTTTACATTTATATTGATGTTAATGAATCTAGACATATATATCTATATAGATTCATTAACATCAATATGAATGTGGGAAATACTAAAATGATTAAAATGATTTACATTGTGAAACGGAGGAAGTAGAAG AAACTCTGTAGGTACGAT AACTAAAAAATACTGAATTCCTTCTGTTTCTTTTTATATGATGTTGGTTGATTAGAAGTAAAGTAATAACCAACGCCTTACAGCTTATAATCATGGCACAGTAGTACGCGATGGGCATGGATATTGGCCTGGATTGCAGGTCGGATACGGAGTCGGAAGCTG CCACTTTGAAGCAACACCCTCGCGGCGGAGGCCATCGCCGGCGCCTTCAGCAGCGCCGCCGCCAAGACGAATAGCATCATGACGAGCACCGCCGNCAGGCCGCCGGCCGCCCGGTGGTCCCTGANCGCCAACGGCATCGGCGATCCTNCGATGACTGGANTTTGTCACGGAT]
[-] EMBL C73484               [                                                                                                                                                                                                                                                                       ATTAACATCAATATGAATGT GGAAATACTAAAATGATTNAAATGATTTACATTGTGAANCGGAGGAAGTAGAAGAAAACTCTGTAGGTACGATAAACTAAAAAATACTGAATTCCTTCTGTTTCTTTTTATATGATGTTGGTTGATTAGAAGTAAAGTAATAACCAACGCCTTACAGCTTATAATCATGGCACAGTAGTACGCGATGGGCATGGATATTGGCCTGGATTGCAGGTCGGATACGGAGTCGGAAGCTGTCCACTTTGAAGCAACACCCTCGCGGCGGAGGCCATCGCCGGCGCCTCCAGCAGCGCCGCCGCCAAGACGAATAGCATCATGACGAGCACCGCCGCCA GCCGCCGGCCG CCGGTGGT CCTGAGCGCCACCGCCATCGTCGATCCTCCGATGACT GATTTTGTCAC    ]




>consensus_12588#1
TTTTTAACACATAGAAATATATAAAAACATTATTGCGTCACACTGCAGCTTCCATTGGTC
GTAGGATAGGTTGTAGTACACGCAGATCGATCGGGATATTGCATATAAGCATATTTGCAT
GGCTCTCAAACATGCAAATAAATATTTTATTTCAACTGTATCTTAAGTTGTACTCCCTCC
GTTTTCATAATGTAAGTCATTCTAGCATTTTTTACATTTATATTGATGTTAATGAATCTA
GACATATATATCTATATAGATTCATTAACATCAATATGAATGTGGGAAATACTAAAATGA
TTAAAATGATTTACATTGTGAAACGGAGGAAGTAGAAGAAACTCTGTAGGTACGATAACT
AAAAAATACTGAATTCCTTCTGTTTCTTTTTATATGATGTTGGTTGATTAGAAGTAAAGT
AATAACCAACGCCTTACAGCTTATAATCATGGCACAGTAGTACGCGATGGGCATGGATAT
TGGCCTGGATTGCAGGTCGGATACGGAGTCGGAAGCTGCCACTTTGAAGCAACACCCTCG
CGGCGGAGGCCATCGCCGGCGCCTTCAGCAGCGCCGCCGCCAAGACGAATAGCATCATGA
CGAGCACCGCCGNCAGGCCGCCGGCCGCCCGGTGGTCCCTGANCGCCAACGGCATCGGCG
ATCCTNCGATGACTGGANTTTGTCACGGAT

consensusID : consensus_12588#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 619
fasta sequence 
                              [TTTTTTTTTTTTTCGAAGTACACGCAAATCGATCGGGATATTGCATATTTGCATGGCTCTCAACCATGCAAATAAATATTTTATTTCAACTGTGTCTTATGTTGTAAAAAAAACTCTGTACGTACGATAACTAACAATAATACTGAATTCCTTCTGTTTCTTTTTATATGATGTTGGTTGATTAGAAGTAAAGTAGTAATAACCAACGCCTTACAGCTTATAATCATGGCACAGTAGTACGCGATGGGCATGGATATTGGCCTGGATTGCAGGTCGGATACGGAGTCGGAAGCTGGCCACTTTGAAGCAACACCCTCGCGGCGGAGGCCATCACCGGCGCCTCCAGCAGCGCCGCCGCCAAGACGAACAGCATCAGAACGAGCAGCGCCGCCAGCTGCCACCGGCCACCGGTGCTCCTGAGCACCGCCGCCATCGCCGATCCTCCAATGATCCTTGCTATCTAAGCTACTACTTAACTGATTTTGCCACGGATGTTTGGGTTAATCTCTGAATTTTCTGCAGGTTTAATTTAACTATGGCCGTTTATATAGGACAAGCTGAGCTACGTACCAGGAGAGATGTAGCAAAAACACCGGCATTCCCCCTTGTCTCGTCCTCT]

[+] EMBL CA761300             [TTTTTTTTTTTTTCGAAGTACACGCAAATCGATCGGGATATTGCATATTTGCATGGCTCTCAACCATGCAAATAAATATTTTATTTCAACTGTGTCTTATGTTGTAAAAAAAACTCTGTACGTACGATAACTAACAATAATACTGAATTCCTTCTGTTTCTTTTTATATGATGTTGGTTGATTAGAAGTAAAGTAGTAATAACCAACGCCTTACAGCTTATAATCATGGCACAGTAGTACGCGATGGGCATGGATATTGGCCTGGATTGCAGGTCGGATACGGAGTCGGAAGCTGGCCACTTTGAAGCAACACCCTCGCGGCGGAGGCCATCACCGGCGCCTCCAGCAGCGCCGCCGCCAAGACGAACAGCATCAGAACGAGCAGCGCCGCCAGCTGCCACCGGCCACCGGTGCTCCTGAGCACCGCCGCCATCGCCGATCCTCCAATGATCCTTGCTATCTAAGCTACTACTTAACTGATTTTGCCACGGATGTTTGGGTTAATCTCTGAATTTTCTGCAGGTTTAATTTAACTATGGCCGTTTATATAGGACAAGCTGAGCTACGTACCAGGAGAGATGTAGCAAAAACACCGGCATTCCCCCTTGTCTCGTCCTCT]




>consensus_12588#2
TTTTTTTTTTTTTCGAAGTACACGCAAATCGATCGGGATATTGCATATTTGCATGGCTCT
CAACCATGCAAATAAATATTTTATTTCAACTGTGTCTTATGTTGTAAAAAAAACTCTGTA
CGTACGATAACTAACAATAATACTGAATTCCTTCTGTTTCTTTTTATATGATGTTGGTTG
ATTAGAAGTAAAGTAGTAATAACCAACGCCTTACAGCTTATAATCATGGCACAGTAGTAC
GCGATGGGCATGGATATTGGCCTGGATTGCAGGTCGGATACGGAGTCGGAAGCTGGCCAC
TTTGAAGCAACACCCTCGCGGCGGAGGCCATCACCGGCGCCTCCAGCAGCGCCGCCGCCA
AGACGAACAGCATCAGAACGAGCAGCGCCGCCAGCTGCCACCGGCCACCGGTGCTCCTGA
GCACCGCCGCCATCGCCGATCCTCCAATGATCCTTGCTATCTAAGCTACTACTTAACTGA
TTTTGCCACGGATGTTTGGGTTAATCTCTGAATTTTCTGCAGGTTTAATTTAACTATGGC
CGTTTATATAGGACAAGCTGAGCTACGTACCAGGAGAGATGTAGCAAAAACACCGGCATT
CCCCCTTGTCTCGTCCTCT

consensusID : consensus_12588#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 589
fasta sequence 
                              [TTTTTTTTTTTTTTTTAAAAAATTTCCTTTTGTATATAGTATGATATATGGAAGCGCAATTAATACATGCATGGAAATATATAAAAACATTATTGCCTCACACTGCAGCTTCCACTGGTCGTAGGCCAGGCTGTAGTACACGCAGACCGAGGTATTACATATTTGCATGGCTCTCAAACATCACA-TGCAAA-TAAATA-TTTTA-TTTGAAATATATCTTAAGTTGTAGAGAAGAAACTTC-TGTAGGAACG-ATAACTATTTCATT-ATATGCTGTTGGTTTATTAAAAGTAAACTAATAACCAACGGC-ATACAGCTTATAATCATGGCAC-AGTAGTAGGCGGTGGGCATGAATATTGGTCTGGATTGCATGTCGGATACGGAGTCGGAAGC-AGTCCACTTTGAAGCAACACCCTCGCGGCGGAGGCCATCACCGGCGCCTCCAGCAGCGCCGCCGCCAAGACGAACAGCATCAGGACGAGCACCGCCGCCA---GCCGCCGGCCACCGGTGGCCCTGAGCGCCGCCGCCATCGCCGATCCTCCGATGATCCTTACTAACTAATTAAGCTACTTAACTGATTTGTCACAGATGTTTG]

[+] EMBL CA763447             [TTTTTTTTTTTTTTTTAAAAAATTTCCTTTTGTATATAGTATGATATATGGAAGCGCAATTAATACATGCATGGAAATATATAAAAACATTATTGCCTCACACTGCAGCTTCCACTGGTCGTAGGCCAGGCTGTAGTACACGCAGACCGAGGTATTACATATTTGCATGGCTCTCAAACATCACA TGCAAA TAAATA TTTTA TTTGAAATATATCTTAAGTTGTAGAGAAGAAACT                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA763446             [TTTTTTTTTTTTTTTTAAAAAATTTCCTTTTGTATATAGTATGATATATGGAAGCGCAATTAATACATGCATGGAAATATATAAAAACATTATTGCCTCACACTGCAGCTTCCACTGGTCGTAGGCCAGGCTGTAGTACACGCAGACCGAGGTATTACATATTTGCATGGCTCTCAAACATCACA TGCAAA TAAATA TTTTA TTTGAAATATATCTTAAGTTGTAGAGAAGAAACT                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AK063190             [                                               ATGGAAGAGCAATTAATACAT  A  GAAATATA AAAAACATTATTGCCT  CATTGCAGCTTCCACTGGTCGTAGGTCAGGCTGTAGTACACGCAGATCGAGGTATTACATATTTGCATCGCTCTCAAACATCACA TGCAAA TAAATA TTTTA TTTGAAATATATCTTAAGTTGTAGAGAAGAAAC TC TGTAGGAACG ATAACTATTTCATT ATATGCTGTTGGTTGATTAAAAGTAAACTAATAACCAACGGC GTACAGCTTATAATCATGGCAC AGTAGTAGGCGGTGGGCATGAATATTGGCCTGGATTGCAGGTCGGATACGGAGTCGGAAGC AGTCCACTTTGAAGCAACACCCTCGCGGCGGAGGCCATCACCGGCGCCTCCTGCAGCGCCGCCGCCATGACGAATAGCATCAGGACGAGCAGCGCCGCCAGCCGCCGCCGGCCACCGGTGGCCCTGAGCGCCGCCGCCATCGCCGATCCTCCGATGATCCTTACTAACTAATTAAGCTACTTAACTGATTTGTCACAGATGTTTG]
[-] EMBL AU076165             [                                                                                                                                                         ATTACANATTTTCATGGCCCCTAAACATCACATTGNAAATTAAATATTTTTATTTTGAAATATATCTTAAGTTGTAGAGAAGAAACTTCTTGTAGGAACGAATAACTATTTCATTAATATNTTGTTGGTTTATTAAAAGTAAACTAATAACCAACGGCAATACAGCTTATAATCATGGCACAAGTAGTAGNCGGTGGGCATGAATATTGGTCTGGATTGCATGTCGGATACGGAGTCGGAAGCAAGTCCACTTTGAAGCAACACCCTCGCGGCGGAGGCCATCACCGGCGCCTCCAGCAGCGCCGCCGCCAAGACGAACAGCATCAGGACGAGCACCGCCGCCA   GCCGCCGGCCACCGGTGGCCCTGAGCGCCGCCGCCATCGCCGATCCTCCGATGATCCT                                            ]
[-] EMBL AU197358             [                                                                                                                                                          TTACATATTTGCATGGCTCTCAAACATCACA TGCAAA TAAATA TTTTA TTTGAAATATATCTTAAGTTGTAGAGAAGAAACTTC TGTAGGAACG ATAACTATTTCATT ATATGCTGTTGGTTTATTAAAAGTAAACTAATAACCAACGGC ATACAGCTTATAATCATGGCAC AGTAGTAGGCGGTGGGCATGAATATTGGTCTGGATTGCATGTCGGATACGGAGTCGGAAGC AGTCCACTTTGAAGCAACACCTTCGCGGCGGAGGCNATCACCGGCGCCTCCAGCAGCGCCGCCGCCAAGACGAACAGCATCAGGACGAGCACCGCCGCCA   GCCGCCGGCCACCGGTGGCCCTGAGCGCCGCCGCCATCGCCGATCCTCCGATGATCCT                                            ]




>consensus_12588#3
TTTTTTTTTTTTTTTTAAAAAATTTCCTTTTGTATATAGTATGATATATGGAAGCGCAAT
TAATACATGCATGGAAATATATAAAAACATTATTGCCTCACACTGCAGCTTCCACTGGTC
GTAGGCCAGGCTGTAGTACACGCAGACCGAGGTATTACATATTTGCATGGCTCTCAAACA
TCACATGCAAATAAATATTTTATTTGAAATATATCTTAAGTTGTAGAGAAGAAACTTCTG
TAGGAACGATAACTATTTCATTATATGCTGTTGGTTTATTAAAAGTAAACTAATAACCAA
CGGCATACAGCTTATAATCATGGCACAGTAGTAGGCGGTGGGCATGAATATTGGTCTGGA
TTGCATGTCGGATACGGAGTCGGAAGCAGTCCACTTTGAAGCAACACCCTCGCGGCGGAG
GCCATCACCGGCGCCTCCAGCAGCGCCGCCGCCAAGACGAACAGCATCAGGACGAGCACC
GCCGCCAGCCGCCGGCCACCGGTGGCCCTGAGCGCCGCCGCCATCGCCGATCCTCCGATG
ATCCTTACTAACTAATTAAGCTACTTAACTGATTTGTCACAGATGTTTG

consensusID : consensus_12588#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 442
fasta sequence 
                              [AGGATCATCGGAGGATCGGCGATGGCGGCGGCGCTCAGGGCCACCGGTGGCCGGCGGCTGGCGGCGGTGCTCGTCCTGATGCTGTTCGTCTTGGCGGCGGCGCTGCTGGAGGCGCCGGTGATGGCCTCCGCCGCGAGGGTGTTGCTTCAAAGTGGACTGCTTCCGACTCCGTATCCGACATGCAATCCAGACCAATATTCATGCCCACCGCCTACTACTGTGCCATGATTATAAGCTGTATGCCGTTGGTTATTAGTTTACTTTTAATAAACCAACAGCATATAATGAAATAGTTATCGTTCCTACAGAAGTTTCTTCTCTACAACTTAAGNTATATTTCAAATAAAATATTTATTTTGCATGTGATGTTTGAGAGCCATGCAAATATGTAATACCCCG-TCTTCGNGTACTACCGCCTNGCCTAGTGGCTACGNCCAGTGGA]

[+] EMBL AU070038             [AGGATCATCGGAGGATCGGCGATGGCGGCGGCGCTCAGGGCCACCGGTGGCCGGCGGCTGGCGGCGGTGCTCGTCCTGATGCTGTTCGTCTTGGCGGCGGCGCTGCTGGAGGCGCCGGTGATGGCCTCCGCCGCGAGGGTGTTGCTTCAAAGTGGACTGCTTCCGACTCCGTATCCGACATGCAATCCAGACCAATATTCATGCCCACCGCCTACTACTGTGCCATGATTATAAGCTGTATGCCGTTGGTTATTAGTTTACTTTTAATAAACCAACAGCATATAATGAAATAGTTATCGTTCCTACAGAAGTTTCTTCTCTACAACTTAAGNTATATTTCAAATAAAATATTTATTTTGCATGTGATGTTTGAGAGCCATGCAAATATGTAATACCCCG TCTTCGNGTACTACCGCCTNGCCTAGTGGCTACGNCCAGTG  ]
[+] EMBL AU070040             [AGGATCATCGGAGGATCGGCGATGGCGGCGGCGCTCAGGGCCACCGGTGGCCGGCGGCTGGCGGCGGTGCTCGTCCTGATGCTGTTCGTCTTGGCGGCGGCGCTGCTGGAGGCGCCGGTGATGGCCTCCGCCGCGAGGGTGTTGCTTCAAAGTGGACTGCTTCCGACTCCGTATCCGACATGCAATCCAGACCAATATTCATGCCCACCGNCTACTACTGTGCCATGATTATAAGCTGTATGCCGTTGGTTATTAGTTTACTTTTAATAAACCAACAGCATATAATGAAATAGTTATCGTTCCTACAGAAGTTTCTTCTCTACAACTTAAGATATATTTCAAATAAAATATTTA TTTGCATGTGATGTTTGAGNGCCATGCAAATATGTAATACCCCGATCTTCGNGTACTACCG CT GGCTAGTGGCTACGGCCAGTGGA]




>consensus_12588#4
AGGATCATCGGAGGATCGGCGATGGCGGCGGCGCTCAGGGCCACCGGTGGCCGGCGGCTG
GCGGCGGTGCTCGTCCTGATGCTGTTCGTCTTGGCGGCGGCGCTGCTGGAGGCGCCGGTG
ATGGCCTCCGCCGCGAGGGTGTTGCTTCAAAGTGGACTGCTTCCGACTCCGTATCCGACA
TGCAATCCAGACCAATATTCATGCCCACCGCCTACTACTGTGCCATGATTATAAGCTGTA
TGCCGTTGGTTATTAGTTTACTTTTAATAAACCAACAGCATATAATGAAATAGTTATCGT
TCCTACAGAAGTTTCTTCTCTACAACTTAAGNTATATTTCAAATAAAATATTTATTTTGC
ATGTGATGTTTGAGAGCCATGCAAATATGTAATACCCCGTCTTCGNGTACTACCGCCTNG
CCTAGTGGCTACGNCCAGTGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GGCCAACTGGGGACTTGTCTTCCGAATTTCTATCTTTTGCCAGATCACCACGGCATGCCT 60
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      CTTCCTCCTCCACTTCAACTACCGTGCCATCCGAAGCTACTCCAGATGCCATTCGACCAA 120
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GAAGATCAGCCCGGAATCCATGGCGTGATGCTCTCTTCTGACCACTGCGGGCTGTACCCT 180
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      CTGCCGGCGCTTCCGTTAAGCAACTCCGCCGCCGCCGCCGCCGCAACCGTCGCATTGGGG 240
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      AAGCACAGTGCAGCCGCCGGTTCCATGCCCAATATTGGCGGCGCTGAGGAGGTGGCCACC 300
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      ACTGTAACCAAAGCTGGCAATGAGAGTACTACTTGCAATGGCTCCACTACATGGTGGAGG 360
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GGCTCGACGATGGCGGCGATGGGGGAGAAGGGGAAGATGAAGATCAGGAGGAAGATGAGG 420
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GAGCCGAGGTTCTGCTTCCAGACCAGAAGCGAAGTGGATGTGCTGGATGACGGGTACAAG 480
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TGGAGGAAGTACGGACAGAAGGTTGTCAAGAACAGTCTCCATCCCAGGTACATATGCTCA 540
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      ACTTAACCAAAACCCTACATATTTGATTTCTTATATCATTTATACATATGTGTAGATAAT 600
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      AGATTCCCCGTTTCTTATCAATTAACTAATTATAAACATAAACAGAAGAATGTCTCGATG 660
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      CCTATTTAATTTGGTTAATTAGTAATACGCAAGTTTATATATACCAGATAAAATATCAAT 720
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TTTATATGTACAGAACTGAGCCATGTTGATCTTGTTTTTTCTCCTAAAGGGCTTCTTCAG 780
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      AACATGGAAAATTTGTAGGATTTTCACAGGAAACATTTCAATTTCTCCCAAATTCTCGTG 840
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      AAATTCCTCCCAACCCAATATACCAAGGGTACTCTCTATGGCAGAAGAGAATTAATGCAT 900
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GCCTGGTTAAACTAACTTGTCAACAAAGGTCTTGATATGAATAGATTAGAAGCTGATTTA 960
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      AGACAAGGCAAAATATCTACAAATATAATTATATATATGCAGGCTAGATTATTACTTTTC 1020
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      CTTTTTATATCAATATAGTTAAAAGCGATTTTACAGTACTTAAGAGATGTTAGGAGGTGC 1080
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      CACCGTTTTTAATGTAAATTCTGGTACCTCTGTAATTAGTATTTAAGGTACTACCAAGTC 1140
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TTTACAATAGAAAATATGGTATCTCTTAACAAGGGAAATGTAAAATTCCTCATTTAATTT 1200
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GGTATGTGCTTATCTATTAGCTCTGTACTTATGATATATATGTTTATTTTGCTTCTACCT 1260
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      ACAATCGAAATAAACGCAGCTACTCCTATAACATATTGCTGTCCAATTATATGATCCATA 1320
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TGTCAAAAGTGTTCGCCAGTATATGGAAAAGTTTCACACACTTGTCATCAGATGACCCTT 1380
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GCAAATAATCTTAATTATGTACTAGTTAATTAAGGTCCAAGAATTAATGGGTATTTTAAT 1440
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TAAATGGGGGTTCACTTTGTTATAACAATGAAAATAATCTATTGAGCTGAATCTGACAGG 1500
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      CTCACCTTCTGCACAGTTTTATTAAAAAAATATTTTTAATGCAAATTGTTACATTTTGGT 1560
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GAACAAGCTTAATTAGTTACTAGTTACATTTCGGTGACAAGTTTAACAAACTCATCATAC 1620
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      ATAACTAGCCGTATCAGTTCTTTAATTTATGATAGGTACTGTCATCCCTGATGCAGATAA 1680
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      AGGGACGGGTCATAAATAGATTAAGGATCGAGTTCTTACCACAAATATTCTGAATATGCA 1740
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TGTATGAGAAGGAGTCTTGGGGTAATTAATTAAGGTATAACGGATCCTAATATGGGCACC 1800
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      ATGAAAGAGAGGACCCTAAATTTGCCAAACTAAGGACGATGCATGCCATTCTACACACTC 1860
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      ATACAACACAAGTAGTGTAAGCCTTAGCTATTTCATGCGATAAAATAAACGGCAATTAGC 1920
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      AGCCAATTAACATAGGCACAAAAGGTACATTAATAAGAAAGATGCTTCAGTTCCCAATTC 1980
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      ATACATCCGTTTGTGAGAAGCTGTGTTAGGAGTATACTGCACTGTATCTGGCATCTTATA 2040
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TATCTATGTATAATGTTCATATAATGATACTATTTCTTTATCTCATTAAACCATATCACC 2100
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TCAATTGTCTTTGACACTTAGATGATTAATTTATGGTCCAAATTATTTTTATCATTTTCT 2160
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TTCTCATACGAAGTTATATCACCTTAGTTTTGTCTTTAGATGATTAATCTATATTATTTC 2220
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TCCTTTTTTTTATTTTGTCGTTGAGGCATATCACCTTAGTTTTACTTTTTAATGATCAAT 2280
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TTATATATGATTTAAATTATTAAAAATCACGCCATCTAAACTATTTTTAACTTTTTTCAT 2340
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GGTCGATCAAAGATGAAAATTATATAAAATTACGTCATCCGTCATCTAGCTATTTTTACA 2400
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TGTTATTTGTTCTATTATTATACAGAACTTCCGCTGCGATGCGCGGGCCCAATCTAACTC 2460
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ---------------------------------------------TTTTTAACACATAGA 15
consensus_12588#0      CCATCTCCTTGCAGAACTCGATCGATAAAAATTAATTAATGTTGTCAATTAGCTAATTAC 2520
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      AATATATAAAAACATTATTGCGTCACACTGCAGCTTCCATTGGTCGTAGGATAGGTTGTA 75
consensus_12588#0      GTCGCATGCGGGAGTCATCGCACGGCCAAATATCTAAAAAAACATGTAATAGTCCTTTCA 2580
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      -------------------TTTTTTTTTTTTTTTTAAAAAATTTCCTTTTGTATATAGTA 41
consensus_12588#1      GTACAC---GCAGATCGATCGGGATATTGCATATAAGCATATTTGCATGGCTCTCAAACA 132
consensus_12588#0      TTTCAGTAAATAAACACATCTATATTTTTTTAATCTATATATTAGATTGAGAAATGGAAA 2640
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ------------------------------------------------------------
consensus_12588#3      T--GATATATGGAAGCGCAATTAATACATGCATGGAAATATA--------TAAAAACATT 91
consensus_12588#1      T--GCAAATAAATATTTTATTTCAACTGTATCTTAAGTTGTAC-------TCCCTCCGTT 183
consensus_12588#0      TTGGTTAGTCAGTACTCCCTCCGTCCCCTAGTATAAGGGATAGACTAGTACTCCATCCGT 2700
consensus_12588#4      ------------------------------------------------------AGGATC 6
                                                                                   

consensus_12588#2      ---------------------------TTTTTTTTTTTTTCGAAGTACACGCAAATCGAT 33
consensus_12588#3      ATTGCCTCACACTGCAGCTTCCACTGGTCGTAGGCCAGGCTGTAGTACACGCAGACCGA- 150
consensus_12588#1      TTCATAATGTAAGTCATTCTAGCATTTTTTACATTTATATTGATGTTAATGAATCTAGAC 243
consensus_12588#0      TTCATAATGTAAGTCATTCTAGCATTTTCTACATTTATATTGATGTTAATGAATCTAGAC 2760
consensus_12588#4      ATCGGAGGATCGGCGATGGCGGCGGCGCTCAGGGCCAC-CGGTGGCCGGCGGCTGGCGGC 65
                                                                *  *     *      *  

consensus_12588#2      CGGGATAT-TGCATATTTGC-ATGGCTCTCAAC-----CATGCAAAT-----AAATATTT 81
consensus_12588#3      ---GGTAT-TACATATTTGC-ATGGCTCTCAAACATCACATGCAAAT-----AAATATTT 200
consensus_12588#1      ATATATATCTATATAGATTC-ATTAACATCAATATGAATGTGGGAAATACTAAAATGATT 302
consensus_12588#0      ATATATATCTATCTAGATTC-ATTAACATCAATATGAATGTGGGAAATATTAGAATGACT 2819
consensus_12588#4      ---GGTGCTCGTCCTGATGCTGTTCGTCTTGGCGGCGGCGCTGCTGG-----AGGCGCCG 117
                            *           * *  *     *                               

consensus_12588#2      TATTTCAACTGTGTCTTATGTTGTA---A----AAAAAACTCTGTACGTA---CGATAAC 131
consensus_12588#3      TATTTGAAATATATCTTAAGTTGTAGAGA----AGAAACTTCTGTAGGAA---CGATAAC 253
consensus_12588#1      AAAATGATTTACATTGTGAAACGGAGGAAGTAGAAGAAACTCTGTAGGTA---CGATAAC 359
consensus_12588#0      TACATGG--TGAAACGGAGGAAGTATATAG--GAGGACACCATGAATATAACTCTCTGGT 2875
consensus_12588#4      GTGATGGCCTCCGCCGCGAGGGTGTTGCTTC--AAAGTGGACTGCTTCCGACTCCGTATC 175
                           *    *                       *        **         *  *   

consensus_12588#2      TAA-CAATAATACTGAATTCCTTCTGTTTCTTTTTATATGATGTTGGTTGATTAGAAGTA 190
consensus_12588#3      TA--------------------------TTTCATTATATGCTGTTGGTTTATTAAAAGTA 287
consensus_12588#1      TA---AAAAATACTGAATTCCTTCTGTTTCTTTTTATATGATGTTGGTTGATTAGAAGTA 416
consensus_12588#0      TTTGCGGAGCTTCTGATCTGTTGGAGATCAGAACTACAAACAGGCATTTTTGTGTGATTT 2935
consensus_12588#4      CGACATGCAATCCAGA----CCAATATTCATGCCCACCGCCTACTACTGTGCCATGATTA 231
                                                          *           *        * * 

consensus_12588#2      AAGTAGTAATA-ACCAA---CGCCTTACAGCTTATA-ATCATGGCACAGTAGTACGCG-A 244
consensus_12588#3      AACTA---ATA-ACCAA---CGGCATACAGCTTATA-ATCATGGCACAGTAGTAGGCG-G 338
consensus_12588#1      AAGTA---ATA-ACCAA---CGCCTTACAGCTTATA-ATCATGGCACAGTAGTACGCG-A 467
consensus_12588#0      GGATGTACACATGCCAAAACTGATCGACGATATATATATGAATGCGCATATGCATGCATG 2995
consensus_12588#4      TAAGCT--GTATGCCGT---TGGTTATTAGTTTACTTTTAATAAACCAACAGCATATA-- 284
                                 *  **      *          **    * *     **   * *      

consensus_12588#2      TGGGCATGGATATTGG--CCTGGATTGCAG--GTCGGATACGGAGTCGGAAGCTGGCCAC 300
consensus_12588#3      TGGGCATGAATATTGG--TCTGGATTGCAT--GTCGGATACGGAGTCGGAAGCAGTCCAC 394
consensus_12588#1      TGGGCATGGATATTGG--CCTGGATTGCAG--GTCGGATACGGAGTCGGAAGCTG-CCAC 522
consensus_12588#0      CAGGAGCTACTTCAGGTGCACGCACAGCAACTGCCGCGTGAAGAAGCGGGTGGAG-CGGC 3054
consensus_12588#4      ATGAAATAGTTATCGT---TCCTACAGAAGTTTCTTCTCTACAACTTAAGNTATATTTCA 341
                         *       *   *        *  * *              *                

consensus_12588#2      TTTGAAGCAACACCCTCGCG-GCGGAGGCCATC-ACCGGCGCCTCCAGCAGCGCCGCCGC 358
consensus_12588#3      TTTGAAGCAACACCCTCGCG-GCGGAGGCCATC-ACCGGCGCCTCCAGCAGCGCCGCCGC 452
consensus_12588#1      TTTGAAGCAACACCCTCGCG-GCGGAGGCCATC-GCCGGCGCCTTCAGCAGCGCCGCCGC 580
consensus_12588#0      TGTCGACGGACTGCCGCATG-GTGATCACCACCTACGAGGGCCGCCACACGCACTCCCCC 3113
consensus_12588#4      AATAAAATATTTATTTTGCATGTGATGTTTGAGAGCCATGCAAATATGTAATACCCCGTC 401
                         *  *               * *           *                 *  *  *

consensus_12588#2      CAAGACGAACAGCATCAGAACGAGCAGCGCCGCCAGCTGCCACCGGCCACC-GGTGC-TC 416
consensus_12588#3      CAAGACGAACAGCATCAGGACGAGCACCGCCGCCAGCCGCC---GGCCACC-GGTGG-CC 507
consensus_12588#1      CAAGACGAATAGCATCATGACGAGCACCGCCGNCAG--GCCGCCGGCCGCCCGGTGGTCC 638
consensus_12588#0      TGCGACGACAACTCCTCCGGCGAGCA----CACCAACTGCTTCAGCTCCTTCTGAAGATT 3169
consensus_12588#4      TTCGNGTACTACCGCCTNGCCTAGTGGCTACGNCCAGTGGA------------------- 442
                          *   *  *         * **      *  *    *                     

consensus_12588#2      CTGAGCACCGCCGCCATCGCCGATCCTCCAATGATCCTTGCTATCTAAGCTA-CTACTTA 475
consensus_12588#3      CTGAGCGCCGCCGCCATCGCCGATCCTCCGATGATCCTTACTAACTAATTAAGCTACTTA 567
consensus_12588#1      CTGANCGCCAACGGCATCGGCGATCCTNCGATGACTGGANTTTGTCACGGAT-------- 690
consensus_12588#0      TTAGCACTTTGCATTTTCGTCGTTGATCCATCCATCAATATATATACCGTCGTATACCTA 3229
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ACTGATTTTGCCACGGATGTTTGGGTTAATCTCTGAATTTTCTGCAGGTTTAATTTAACT 535
consensus_12588#3      ACTGATTT-GTCACAGATGTTTG------------------------------------- 589
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      TATGTCCACCGTTTGATCGATTAACT--GTGGCTAGCTCTAGCTCTCTTTCATTTTGATG 3287
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ATGGCCGTTTATATAGGACAAGCTGAGCTACGTACCAGGAGAGATGTAGCAAAAACACCG 595
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GTTGAGATATATAGGCGACGTAATATCGAGCCATGCCTGCGCAATGTACCAGTACTGCTA 3347
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      GCATTCCCCCTTGTCTCGTCCTCT------------------------------------ 619
consensus_12588#3      ------------------------------------------------------------
consensus_12588#1      ------------------------------------------------------------
consensus_12588#0      GCTATACGTGAGATGTATTGCGTGCATGCACGTACAATTTACAAGCAGCAGTCAATAAAT 3407
consensus_12588#4      ------------------------------------------------------------
                                                                                   

consensus_12588#2      ---------
consensus_12588#3      ---------
consensus_12588#1      ---------
consensus_12588#0      TAAGCTATG 3416
consensus_12588#4      ---------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)