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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12590#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2825 fasta sequence
[CACGCCGCTGATACTGATAGCCTCCCACCGATCCAATTCCAACCCTAACCCTCCGCCTCCGCCTCGCCTCGCCGGCGCCGAAGCCCTCGCCCGCTCGTCGGCGACCCCTCGGCACCTCATCCTCCCCGACGCGCGCGCCTCCGCTCGCCGGGGCGAGAGGGATTCGTCGGCCACGGTCCGCAGCCGCAATGGAGCAAGATCAGGGCGTTGCTGCCGCGGCGGCGTCGGAGAATCCAAGCGCCGGCCAGGGCGCTCACGATTCCGGTAGCGCGGGGGCTGGCGCCGCAGCCTCTTCCATTGCGTCTTTCGATTCGGCCACTGCAAACCCTGACGCAAACGTTTACAGTCAGAATCCGAGCTCCGTCCCGCAAGCCGATGGCGCTCAGGGAGCGGATGCCTCCGTGTACCCCGCCGACCACGCGCCGCTAAACGGGACATCGGGCCAGGTGGTAGATTACCAGTCTGCGGGGGCTGCAGAGAACGGCGCCGCCACAAACGAGATGGGTGAGCCGGCTCCCGAGCAGTCCTATGCGGATGCTGTGCTTTCAGCAGAAGAAGCAAGGTTGTGGAATGCCGTTACAGCGAATTGCTTAGACTTCAATGCTTGGACTGCGCTTATTGATGAGACAGAGAAAACTGCTGAGAGCAATATCTTGAAACTAAGAAAAGTGTATGATGCATTCCTTGCGGAGTTCCCTCTCTGCTTTGGATACTGGAAGAAATATGCAGATCATGAAGCACGTCTTGATGGTGTCACAAAAGTTATAGAGGTTTATGAACGTGCAGTTCTTGCTGTTACTTATTCCGTGGACATTTGGTATAACTATTGTCAGTTTGCAATTTCTACATATGAAGACCCAGATATCATCAGAAGACTGTTCGAACGGGGTTTGGCATATGTTGGAACAGACTATCGTTCCAATATTTTGTGGGATGAGTACATTAAGTACGAAGAATCACTGCAGGCATGGAGTCATCTAGCCATCATATATACGAGAATATTGGAGCATCCTATAACACAGCTTGATCGGTATTTCCATTGCCTAAAGGAGTTGGCCGCAACACGAAGTTTATCAGAAATACTTACCTCAGAGGAAGCTGCCATGTATTCTGTTACTGCCGAGAACACTGCTCAGACGCTTGATGGAGAGACACAACCTGGTGATGTAGATATGTCTGCTCAACCCGAAATTTCAGGTTCAACAGAGGCAGATAACCTGGCAAAATACGTTTCTGTTAGAGAAGAAATGTATAACAAGGCTAAAGAGTATGAGTCTAAGATTATTGGTTTTGAGCTAGCAATTAGAAGACCATATTTTCATGTCAAGCCCCTTGACAATCCAGAGCTTGAAAATTGGCACAACTATCTTGATCTTATTGAGAAAGAAGAAGACATAAATAAGGTTATCAAGCTGTATGAAAGATGTGTTATTGCATGTGCTAGTTATTCAGAGTTTTGGATCCGTTATGTGCTATGCATGGAAGCTAGAGGAAGCATAGAACTAGCAAACAATGCTCTGGCTCGTGCCACTCATGTTTTTGTCAAGAAGCAGGCAGAGATCCATCTGTTCAGTGCAAGATTCAAGGAGCTTAGTGGAGATGTCTCTGGAGCACGTGTAGAATACCAGCATCTTTATTCTGATCTGTACCCTGGCCTTTTAGAAGCCATTGTTAAGCATTCTAATATGGAGCACCGATTGGGAGATAAAGAATCTGCTT-GCT-CAATTTATGAGAAGGCCATTGCCGCTGAAAAGGAAAAGGATCGGAGCCAGATTTTGCCTACTTTGCTGATTCAGTACTCACGATTCTTATCTTTGGCCATCGGTGACATCGAG-AAGGCAAAGGAGACGCTAACTGGTTTTCTCGAACAATGCGATTTGACAAAATCAATTATTGAGGCTATCATGCAACTAGAGTCGATCCTTCCATCTGAAAAGCGTATTGAATTTTTAGATTCACTGGTCGAGAAGTTTCTTACAGCTGAACCAACCGAAGGGGAAGTCACAAGTCTAGCTGACAAGGAAGACATATCTTCCATATTTTTAGAGTTTTTGGATCTATTTGGGGATGCACAAGCGATCAAGAAGGCTACCAATCGGCATCTTACTCATTTTTCGTGGAAGAGAAGCATGCTGTCATCAAAGAAGCGAAGAGCTGATGATGTTATCATGTCAGACAGAGATAAATTGGCTAGGATTGGGGATGGTACTCAGCCAGTTGTGGGAACTGATCCAAATGCTCATAATCCTCCAGTTTGGCCAGCGACATCTGAAGCATCGGGCCAACAATGGGGAGCTGCTTATGCACCACAGGCCACTTATCCTGCGTATGGAACTTACGACTACAGCCATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGTGCCTATCCTCCAACATACCCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGCAATGGCGGTGGCGGCACCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACCTGTTGCAGCTCAGCAACCATATTATGGAACAGGAACATACTACTGATCTGTAGACTGATTCAAGAGGGTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAATTAGCATATTTTACTGATGATACTGTAGGTCGAAGCCATGGCAGGACCCTTTGTATTAGTACTACTAGCGTTACCGGAAGACTAGTTAAGCACATGATTTGTATAGCACCTCGTGACATTTTCCTGCTAGCATAATGGTCCAT-TGTTTTCATCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK065966 [CACGCCGCTGATACTGATAGCCTCCCACCGATCCAATTCCAACCCTAACCCTCCGCCTCCGCCTCGCCTCGCCGGCGCCGAAGCCCTCGCCCGCTCGTCGGCGACCCCTCGGCACCTCATCCTCCCCGACGCGCGCGCCTCCGCTCGCCGGGGCGAGAGGGATTCGTCGGCCACGGTCCGCAGCCGCAATGGAGCAAGATCAGGGCGTTGCTGCCGCGGCGGCGTCGGAGAATCCAAGCGCCGGCCAGGGCGCTCACGATTCCGGTAGCGCGGGGGCTGGCGCCGCAGCCTCTTCCATTGCGTCTTTCGATTCGGCCACTGCAAACCCTGACGCAAACGTTTACAGTCAGAATCCGAGCTCCGTCCCGCAAGCCGATGGCGCTCAGGGAGCGGATGCCTCCGTGTACCCCGCCGACCACGCGCCGCTAAACGGGACATCGGGCCAGGTGGTAGATTACCAGTCTGCGGGGGCTGCAGAGAACGGCGCCGCCACAAACGAGATGGGTGAGCCGGCTCCCGAGCAGTCCTATGCGGATGCTGTGCTTTCAGCAGAAGAAGCAAGGTTGTGGAATGCCGTTACAGCGAATTGCTTAGACTTCAATGCTTGGACTGCGCTTATTGATGAGACAGAGAAAACTGCTGAGAGCAATATCTTGAAACTAAGAAAAGTGTATGATGCATTCCTTGCGGAGTTCCCTCTCTGCTTTGGATACTGGAAGAAATATGCAGATCATGAAGCACGTCTTGATGGTGTCACAAAAGTTATAGAGGTTTATGAACGTGCAGTTCTTGCTGTTACTTATTCCGTGGACATTTGGTATAACTATTGTCAGTTTGCAATTTCTACATATGAAGACCCAGATATCATCAGAAGACTGTTCGAACGGGGTTTGGCATATGTTGGAACAGACTATCGTTCCAATATTTTGTGGGATGAGTACATTAAGTACGAAGAATCACTGCAGGCATGGAGTCATCTAGCCATCATATATACGAGAATATTGGAGCATCCTATAACACAGCTTGATCGGTATTTCCATTGCCTAAAGGAGTTGGCCGCAACACGAAGTTTATCAGAAATACTTACCTCAGAGGAAGCTGCCATGTATTCTGTTACTGCCGAGAACACTGCTCAGACGCTTGATGGAGAGACACAACCTGGTGATGTAGATATGTCTGCTCAACCCGAAATTTCAGGTTCAACAGAGGCAGATAACCTGGCAAAATACGTTTCTGTTAGAGAAGAAATGTATAACAAGGCTAAAGAGTATGAGTCTAAGATTATTGGTTTTGAGCTAGCAATTAGAAGACCATATTTTCATGTCAAGCCCCTTGACAATCCAGAGCTTGAAAATTGGCACAACTATCTTGATCTTATTGAGAAAGAAGAAGACATAAATAAGGTTATCAAGCTGTATGAAAGATGTGTTATTGCATGTGCTAGTTATTCAGAGTTTTGGATCCGTTATGTGCTATGCATGGAAGCTAGAGGAAGCATAGAACTAGCAAACAATGCTCTGGCTCGTGCCACTCATGTTTTTGTCAAGAAGCAGGCAGAGATCCATCTGTTCAGTGCAAGATTCAAGGAGCTTAGTGGAGATGTCTCTGGAGCACGTGTAGAATACCAGCATCTTTATTCTGATCTGTACCCTGGCCTTTTAGAAGCCATTGTTAAGCATTCTAATATGGAGCACCGATTGGGAGATAAAGAATCTGCTT GCT CAATTTATGAGAAGGCCATTGCCGCTGAAAAGGAAAAGGATCGGAGCCAGATTTTGCCTACTTTGCTGATTCAGTACTCACGATTCTTATCTTTGGCCATCGGTGACATCGAG AAGGCAAAGGAGACGCTAACTGGTTTTCTCGAACAATGCGATTTGACAAAATCAATTATTGAGGCTATCATGCAACTAGAGTCGATCCTTCCATCTGAAAAGCGTATTGAATTTTTAGATTCACTGGTCGAGAAGTTTCTTACAGCTGAACCAACCGAAGGGGAAGTCACAAGTCTAGCTGACAAGGAAGACATATCTTCCATATTTTTAGAGTTTTTGGATCTATTTGGGGATGCACAAGCGATCAAGAAGGCTACCAATCGGCATCTTACTCATTTTTCGCGGAAGAGAAGCATGCTGTCATCAAAGAAGCGAAGAGCTGATGATGTTATCATGTCAGACAGAGATAAATTGGCTAGGATTGGGGATGGTACTCAGCCAGTTGTGGGAACTGATCCAAATGCTCATAATCCTCCAGTTTGGCCAGCGACATCTGAAGCATCGGGGCAACAATGGGGAGCTGCTTATGCACCACAGGCCACTTATCCTGCGTATGGAACTTACGACTACAGCCATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGCGCCTATCCTCCAACATACCCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGCAATGGCGGTGGCGGCACCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACCTGTTGCAGCTCAGCAACCATATTATGGAACAGGAACATACTACTGATCTGTAGACTGATTCAAGAGGGTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAATTAGCATATTTTACTGATGATACTGTAGGTCGAAGCCATGGCAGGACCCTTTGTATTAGTACTACTAGCGTTACCAGAAGACTAGTTAAGCACATGATTTGTATAGCACCTCGTGACATTTTCCTGCTAGCATAATGGTCCAT TGT ]
[+] EMBL CB662704 [ ACCCGAAATTTCAGGTTCAACAGAGGCAGATAACCTGGCAAAATACGTTTCTGTTAGAGAAGAAATGTATAACAAGGCTAAAGAGTATGAGTCTAAGATTATTGGTTTTGAGCTAGCAATTAGAAGACCATATTTTCATGTCAAGCCCCTTGACAATCCAGAGCTTGAAAATTGGCACAACTATCTTGATCTTATTGAGAAAGAAGAAGACATAAATAAGGTTATCAAGCTGTATGAAAGATGTGTTATTGCATGTGCTAGTTATTCAGAGTTTTGGATCCGTTATGTGCTATGCATGGAAGCTAGAGGAAGCATAGAACTAGCAAACAATGCTCTGGCTCGTGCCACTCATGTTTTTGTCAAGAAGCAGGCAGAGATCCATCTGTTCAGTGCAAGATTCAAGGAGCTTAGTGGAGATGTCTCTGGAGCACGTGTAGAATACCAGCATCTTTATTCTGATCTGTACCCTGGCCTTTTAGAAGCCATTGTTAAGCATTCTAATATGGAGCACCGATTGGGAGATAAAGAATCTGCTT GCT CAATTTATGAGAAGGCCATTGCCGCTGAAAAGGAAAAGGATCGGAGCCAGATTTTGCCTACTTTGCTGATTCAGTACTCACGATTCTTATCTTTGGCCATCGGTGACATCGAG AAGGCAAAGGAGACGCTAACTGGTTTTCTCGAACAATGCGATTTGACAAAATCAATTATTGAGGCTATCATGCAACTAGAGTCGATCCTTCCATCTGAGAAGCGTATTGAATTTTTAGATTCACTGGTCGAGAAGTT ]
[+] EMBL AU056499 [ ATCTTGATCTTATTGAGAAAGAAGAAGACATAAATAAGGTTATCAAGCTGTATGAAAGATGTGTTATTGCATGTGCTAGTTATTCAGAGTTTTGGATCCGTTATGTGCTATGCATGGAAGCTAGAGGAAGCATAGAACTAGCAAACAATGCTCTGGCTCGTGCCACTCATGTTTTTGTCAAGAAGCAGGCAGAGATCCATCTGTTCAGTGCAAGATTCAAGGAGCTTAGTGGAGATGTCTCTGGAGCACGTGTAGAATACCAGCATCTTTATTCTGATCTGTACCCTGGCCTTTTAGAAGCCATTGTTAAGCATTCTAATATGGAGCACCGATTGGGAGATAAAGAATCTGCTTGGCTNCAATTTATGAGAAGGCCATTGCCGCTGAAAAGGAAAAGGATCGGAGCCAGATTTTGCCTACTTTGCTGATTCAGTACTCACGATTCTTATCTTTGGCCATCGGTGACATCGAGAAAGGCAAAGGAGACGCTAACTGGNTTTCTCGAACAATGCGAATTGACAAAATCAATTATTG ]
[-] EMBL CB630019 [ TCACAAGTCTAGCTGACAAGGAAGACATATCTTCCATATTTTTAGAGTTTTTGGATCTATTTGGGGATGCACAAGCGATCAAGAAGGCTACCAATCGGCATCTTACTCATTTTTCGTGGAAGAGAAGCATGCTGTCATCAAAGAAGCGAAGAGCTGATGATGTTATCATGTCAGACAGAGATAAATTGGCTAGGATTGGGGATGGTACTCAGCCAGTTGTGGGAACTGATCCAAATGCTCATAATCCTCCAGTTTGGCCAGCGACATCTGAAGCATCGGGCCAACAATGGGGAGCTGCTTATGCACCACAGGCCACTTATCCTGCGTATGGAACTTACGACTACAGCCATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGTGCCTATCCTCCAACATACCCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGCAATGGCGGTGGCGGCACCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACCTGTTGCAGCTCAGCAACCATATTATGGAACAGGAACATACTACTGATCTGTAGACTGATTCAAGAGGGTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAATTAGCATATTTTACTGATGATACTGTAGGTCGAAGCCATGGCAGGACCCTTTGTATTAGTACTACTAGCGTTACCGGAAGACTAGTTAAGCACATGATTTGTATAGCACCTCGTGACATTTTCCTGCTAGCATAATGGTCCAT TGTTTT ]
[-] EMBL CB633819 [ GAAGACATATCTTCCATATTTTTAGAGTTTTTGGATCTATTTGGGGATGCACAAGCGATCAAGAAGGCTACCAATCGGCATCTTACTCATTTTTCGTGGAAGAGAAGCATGCTGTCATCAAAGAAGCGAAGAGCTGATGATGTTATCATGTCAGACAGAGATAAATTGGCTAGGATTGGGGATGGTACTCAGCCAGTTGTGGGAACTGATCCAAATGCTCATAATCCTCCAGTTTGGCCAGCGACATCTGAAGCATCGGGCCAACAATGGGGAGCTGCTTATGCACCACAGGCCACTTATCCTGCGTATGGAACTTACGACTACAGCCATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGTGCCTATCCTCCAACATACCCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGCAATGGCGGTGGCGGCACCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACCTGTTGCAGCTCAGCAACCATATTATGGAACAGGAACATACTACTGATCTGTAGACTGATTCAAGAGGGTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAATTAGCATATTTTACTGATGATAGGGTAGGTCGAAGCCATGGCAGGACCCTTTGTATTAGTACTACTAGCGTTACCGGAAGACTAGTTAAGCACATGATTTGTATAGCACCTCGTGAC ]
[-] EMBL CB634947 [ GAAGACATATCTTCCATATTTTTAGAGTTTTTGGATCTATTTGGGGATGCACAAGCGATCAAGAAGGCTACCAATCGGCATCTTACTCATTTTTCGTGGAAGAGAAGCATGCTGTCATCAAAGAAGCGAAGAGCTGATGATGTTATCATGTCAGACAGAGATAAATTGGCTAGGATTGGGGATGGTACTCAGCCAGTTGTGGGAACTGATCCAAATGCTCATAATCCTCCAGTTTGGCCAGCGACATCTGAAGCATCGGGCCAACAATGGGGAGCTGCTTATGCACCACAGGCCACTTATCCTGCGTATGGAACTTACGACTACAGCCATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGTGCCTATCCTCCAACATACCCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGCAATGGCGGTGGCGGCACCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACCTGTTGCAGCTCAGCAACCATATTATGGAACAGGAACATACTACTGATCTGTAGACTGATTCAAGAGGGTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAATTAGCATATTTTACTGATGATACTGTAGGTCGAAGCCATGGCAGGACCCTTTGTATTAGTACTACTAGCGTTACCGGAAGACTAGTTAAGCACATGATTTGTATAGCACCTCGTGACATTTTCCTGCTAGCATAATGGTCCAT TGTT ]
[+] EMBL CA305856 [ GTTGTGGGAACTGATCCAAATGCTCATAATCCTCCAGTTTGGCCAGCGACATCTGAAGCATCGGGCCAACAATGGGGAGCTGCTTATGCACCACAGGCCACTTATCCTGCGTATGGAACTTACGACTACAGCCATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGTGCCTATCCTCCAACATACCCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGCAATGGCGGTGGCGGCACCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACCTGTTGCAGCTCAGCAACCATATTATGGAACAGGAACATACTACTGATCTGTAGACTGATTCAAGAGGGTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAATTAGCATATTTTACTGATGATACTGTAGGTCGAAGCCATGGCAGG ]
[+] EMBL BM420049 [ TATCCTGCGTATGGAACTT CGA TACAGCCATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGTGCCTATCCTCCAACATACCCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGCAATGGCGGTGGCGGCACCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACCTGTTGCAGCTCAGCAACCATATTATGGAACAGGAACATACTACTGATCTGTAGACTGATTCAAGAGGGTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAATTAGCATATTTTACTGATGATACTGTAGGTCGAAGCCNTGGCAGGACCCTTTGTATTAGTACTACTAGCGTTACCGGAAGACTA TTAAGCACATGATTGGTATACCACCTCGGGACATTTTCCGGCTAGCANAATGGTCCATGGGTTTTCATCTCTAAAAAAAAAA ]
[+] EMBL AU056500 [ TACTACTGNTCTGTAGACTGATTCAAGAGGGTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAATTAGCATATTTTACTGATGATACTGTAGGTCGAAGCCATGGCAGGNCCCTTTGTATTAGTACTACTAGCGTTACCAGAAGACTAGTTAAGCACATGATTTGTATAGCACCTCGTGACATTTTCCTGCTAGCATAATGGTCCAT TGTTTTCATCTNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_12590#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1372 fasta sequence
[CCTCGCCTCGCCGGCGCCGAAGCCCTCGCCCGCTCGTCGGCGACCCCTCGGCACCTCATCCTCCCCGACGCGCGCGCCTCCGCTCGCCGGGGCGAGAGGGATTCGTCGGTCACGGTCCGCAGCCGCAATGGAGCAAGATCAGGGCGTTGCTGCCGCGGCGGCGTCGGAGAATCCAAGCGCCGGCCAGGGCGCTCACGATTCCGTCAGAATCCGAGCTCCGTCCCGCAAGCCGATGGCGCTCAGGGAGCGGATGCCTCCGTGTACCCCGCCGACCACGCGCCGCTAAACGGGACAGCGGGCCAGGTGGTAGATTACCAGTCTGCGGGAGCTGCAGAGAACGGCGCCGCCACAAACGAGATGGGTGAGCCGGTTCCCGAGCAGTCCTATGCGGATGCTGTGCTTTCAGCAGAAGAGGCAAGGTTGTGGAATGCCGTTACAGCGAATTGCTTAGACTTCAATGCTTGGACTGCGCTTATTGATGAGACAGAGAAAACTGCTGAGAGCAATATCTTGAAACTAAGAAAAGTGTATGATGCATTCCTTGCGGAGTTCCCTCTCTGCTTTGGATACTGGAAGAAATATGCAGATCATGAAGCACGTCTTGATGGTGTCACAAAAGTTATAGAGGTTTATGAACGTGCAGTTCTTGCTGTTACTTATTCCGTGGACATTTGGTATAACTATTGTCAGTTTGCAATTTCTACATATGAAGACCCAGATATCATCAGAAGACTGTTCGAACGGGGTTTGGCATATGTTGGAACAGACTATCGTTCCAATATTTTGTGGGATGAGTACATTAAGTACGAAGAATCACTGCAGGCATGGAGTCATCTAGCCATCATATATACGAGAATATTGGAGCATCCTATAACACAGCTTGATCGGTATTTCCATTGCCTAAAGGAGTTGGCCGCAACACGAAGTTTATCAGAAATACTTACCTCAGAGGAAGCTGCCATGTATTCTGTTACTGCCGAGAACACTGCTCAGACGCTTGATGGAGTGACACAACCTGGTGATGTAGATATGTCTGCTCAACCCGAAATTTCAGGTTCAACAGAGGCAGATAACCTGGCAAAATACGTTTCTGTTAGAGAAGAAATGTATAACAAGGCTAAAGAGTATGAGTCTAAGATTATTGGTTTTGAGCTAGCAATTAGAAGACCATATTTTCATGTCAAGCCCCTTGACAATCCAGAGCTTGAAAATTGGCACAACTATCTTGATCTTATTGAGAAAGAAGAAGACATAAATAAGGTATGCTTTTGCAATGGAAATAGTCCTTTACTTTTTCATTCAGTAGACTTCATGCAGTACCTGGAGTCTTGTAACTTACAATTTTAGTCTTATTGGCTCCATTATATGCTTT]
[+] EMBL CB634946 [CCTCGCCTCGCCGGCGCCGAAGCCCTCGCCCGCTCGTCGGCGACCCCTCGGCACCTCATCCTCCCCGACGCGCGCGCCTCCGCTCGCCGGGGCGAGAGGGATTCGTCGGTCACGGTCCGCAGCCGCAATGGAGCAAGATCAGGGCGTTGCTGCCGCGGCGGCGTCGGAGAATCCAAGCGCCGGCCAGGGCGCTCACGATTCCGTCAGAATCCGAGCTCCGTCCCGCAAGCCGATGGCGCTCAGGGAGCGGATGCCTCCGTGTACCCCGCCGACCACGCGCCGCTAAACGGGACAGCGGGCCAGGTGGTAGATTACCAGTCTGCGGGAGCTGCAGAGAACGGCGCCGCCACAAACGAGATGGGTGAGCCGGTTCCCGAGCAGTCCTATGCGGATGCTGTGCTTTCAGCAGAAGAGGCAAGGTTGTGGAATGCCGTTACAGCGAATTGCTTAGACTTCAATGCTTGGACTGCGCTTATTGATGAGACAGAGAAAACTGCTGAGAGCAATATCTTGAAACTAAGAAAAGTGTATGATGCATTCCTTGCGGAGTTCCCTCTCTGCTTTGGATACTGGAAGAAATATGCAGATCATGAAGCACGTCTTGATGGTGTCACAAAAGTTATAGAGGTTTATGAACGTGCAGTTCTTGCTGTTACTTATTCCGTGGACATTTGGTATAACTATTGTCAGTTTGCAATTTCTACATATGAAGACCCAGATATCATCAGAAGACTGTTCGAACGGGGTTTGGCATATGTTGGAACAGACTATCGTTCCAATATTTTGTGGGATGAGTACATTAAGTACGAAGAATCACTGCAGGCATGGAGTCATCTAGCCATCATATATACGAGAATA ]
[+] EMBL CB630018 [ TGATGGTGTCACAAAAGTTATAGAGGTTTATGAACGTGCAGTTCTTGCTGTTACTTATTCCGTGGACATTTGGTATAACTATTGTCAGTTTGCAATTTCTACATATGAAGACCCAGATATCATCAGAAGACTGTTCGAACGGGGTTTGGCATATGTTGGAACAGACTATCGTTCCAATATTTTGTGGGATGAGTACATTAAGTACGAAGAATCACTGCAGGCATGGAGTCATCTAGCCATCATATATACGAGAATATTGGAGCATCCTATAACACAGCTTGATCGGTATTTCCATTGCCTAAAGGAGTTGGCCGCAACACGAAGTTTATCAGAAATACTTACCTCAGAGGAAGCTGCCATGTATTCTGTTACTGCCGAGAACACTGCTCAGACGCTTGATGGAGTGACACAACCTGGTGATGTAGATATGTCTGCTCAACCCGAAATTTCAGGTTCAACAGAGGCAGATAACCTGGCAAAATACGTTTCTGTTAGAGAAGAAATGTATAACAAGGCTAAAGAGTATGAGTCTAAGATTATTGGTTTTGAGCTAGCAATTAGAAGACCATATTTTCATGTCAAGCCCCTTGACAATCCAGAGCTTGAAAATTGGCACAACTATCTTGATCTTATTGAGAAAGAAGAAGACATAAATAAGGTATGCTTTTGCAATGGAAATAGTCCTTTACTTTTTCATTCAGTAGACTTCATGCAGTACCTGGAGTCTTGTAACTTACAATTTTAGTCTTATTGGCTCCATTATATGCTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12590#0 CACGCCGCTGATACTGATAGCCTCCCACCGATCCAATTCCAACCCTAACCCTCCGCCTCC 60
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GCCTCGCCTCGCCGGCGCCGAAGCCCTCGCCCGCTCGTCGGCGACCCCTCGGCACCTCAT 120
consensus_12590#1 -CCTCGCCTCGCCGGCGCCGAAGCCCTCGCCCGCTCGTCGGCGACCCCTCGGCACCTCAT 59
***********************************************************
consensus_12590#0 CCTCCCCGACGCGCGCGCCTCCGCTCGCCGGGGCGAGAGGGATTCGTCGGCCACGGTCCG 180
consensus_12590#1 CCTCCCCGACGCGCGCGCCTCCGCTCGCCGGGGCGAGAGGGATTCGTCGGTCACGGTCCG 119
************************************************** *********
consensus_12590#0 CAGCCGCAATGGAGCAAGATCAGGGCGTTGCTGCCGCGGCGGCGTCGGAGAATCCAAGCG 240
consensus_12590#1 CAGCCGCAATGGAGCAAGATCAGGGCGTTGCTGCCGCGGCGGCGTCGGAGAATCCAAGCG 179
************************************************************
consensus_12590#0 CCGGCCAGGGCGCTCACGATTCCGGTAGCGCGGGGGCTGGCGCCGCAGCCTCTTCCATTG 300
consensus_12590#1 CCGGCCAGGGCGCTCACGATTCCG------------------------------------ 203
************************
consensus_12590#0 CGTCTTTCGATTCGGCCACTGCAAACCCTGACGCAAACGTTTACAGTCAGAATCCGAGCT 360
consensus_12590#1 ----------------------------------------------TCAGAATCCGAGCT 217
**************
consensus_12590#0 CCGTCCCGCAAGCCGATGGCGCTCAGGGAGCGGATGCCTCCGTGTACCCCGCCGACCACG 420
consensus_12590#1 CCGTCCCGCAAGCCGATGGCGCTCAGGGAGCGGATGCCTCCGTGTACCCCGCCGACCACG 277
************************************************************
consensus_12590#0 CGCCGCTAAACGGGACATCGGGCCAGGTGGTAGATTACCAGTCTGCGGGGGCTGCAGAGA 480
consensus_12590#1 CGCCGCTAAACGGGACAGCGGGCCAGGTGGTAGATTACCAGTCTGCGGGAGCTGCAGAGA 337
***************** ******************************* **********
consensus_12590#0 ACGGCGCCGCCACAAACGAGATGGGTGAGCCGGCTCCCGAGCAGTCCTATGCGGATGCTG 540
consensus_12590#1 ACGGCGCCGCCACAAACGAGATGGGTGAGCCGGTTCCCGAGCAGTCCTATGCGGATGCTG 397
********************************* **************************
consensus_12590#0 TGCTTTCAGCAGAAGAAGCAAGGTTGTGGAATGCCGTTACAGCGAATTGCTTAGACTTCA 600
consensus_12590#1 TGCTTTCAGCAGAAGAGGCAAGGTTGTGGAATGCCGTTACAGCGAATTGCTTAGACTTCA 457
**************** *******************************************
consensus_12590#0 ATGCTTGGACTGCGCTTATTGATGAGACAGAGAAAACTGCTGAGAGCAATATCTTGAAAC 660
consensus_12590#1 ATGCTTGGACTGCGCTTATTGATGAGACAGAGAAAACTGCTGAGAGCAATATCTTGAAAC 517
************************************************************
consensus_12590#0 TAAGAAAAGTGTATGATGCATTCCTTGCGGAGTTCCCTCTCTGCTTTGGATACTGGAAGA 720
consensus_12590#1 TAAGAAAAGTGTATGATGCATTCCTTGCGGAGTTCCCTCTCTGCTTTGGATACTGGAAGA 577
************************************************************
consensus_12590#0 AATATGCAGATCATGAAGCACGTCTTGATGGTGTCACAAAAGTTATAGAGGTTTATGAAC 780
consensus_12590#1 AATATGCAGATCATGAAGCACGTCTTGATGGTGTCACAAAAGTTATAGAGGTTTATGAAC 637
************************************************************
consensus_12590#0 GTGCAGTTCTTGCTGTTACTTATTCCGTGGACATTTGGTATAACTATTGTCAGTTTGCAA 840
consensus_12590#1 GTGCAGTTCTTGCTGTTACTTATTCCGTGGACATTTGGTATAACTATTGTCAGTTTGCAA 697
************************************************************
consensus_12590#0 TTTCTACATATGAAGACCCAGATATCATCAGAAGACTGTTCGAACGGGGTTTGGCATATG 900
consensus_12590#1 TTTCTACATATGAAGACCCAGATATCATCAGAAGACTGTTCGAACGGGGTTTGGCATATG 757
************************************************************
consensus_12590#0 TTGGAACAGACTATCGTTCCAATATTTTGTGGGATGAGTACATTAAGTACGAAGAATCAC 960
consensus_12590#1 TTGGAACAGACTATCGTTCCAATATTTTGTGGGATGAGTACATTAAGTACGAAGAATCAC 817
************************************************************
consensus_12590#0 TGCAGGCATGGAGTCATCTAGCCATCATATATACGAGAATATTGGAGCATCCTATAACAC 1020
consensus_12590#1 TGCAGGCATGGAGTCATCTAGCCATCATATATACGAGAATATTGGAGCATCCTATAACAC 877
************************************************************
consensus_12590#0 AGCTTGATCGGTATTTCCATTGCCTAAAGGAGTTGGCCGCAACACGAAGTTTATCAGAAA 1080
consensus_12590#1 AGCTTGATCGGTATTTCCATTGCCTAAAGGAGTTGGCCGCAACACGAAGTTTATCAGAAA 937
************************************************************
consensus_12590#0 TACTTACCTCAGAGGAAGCTGCCATGTATTCTGTTACTGCCGAGAACACTGCTCAGACGC 1140
consensus_12590#1 TACTTACCTCAGAGGAAGCTGCCATGTATTCTGTTACTGCCGAGAACACTGCTCAGACGC 997
************************************************************
consensus_12590#0 TTGATGGAGAGACACAACCTGGTGATGTAGATATGTCTGCTCAACCCGAAATTTCAGGTT 1200
consensus_12590#1 TTGATGGAGTGACACAACCTGGTGATGTAGATATGTCTGCTCAACCCGAAATTTCAGGTT 1057
********* **************************************************
consensus_12590#0 CAACAGAGGCAGATAACCTGGCAAAATACGTTTCTGTTAGAGAAGAAATGTATAACAAGG 1260
consensus_12590#1 CAACAGAGGCAGATAACCTGGCAAAATACGTTTCTGTTAGAGAAGAAATGTATAACAAGG 1117
************************************************************
consensus_12590#0 CTAAAGAGTATGAGTCTAAGATTATTGGTTTTGAGCTAGCAATTAGAAGACCATATTTTC 1320
consensus_12590#1 CTAAAGAGTATGAGTCTAAGATTATTGGTTTTGAGCTAGCAATTAGAAGACCATATTTTC 1177
************************************************************
consensus_12590#0 ATGTCAAGCCCCTTGACAATCCAGAGCTTGAAAATTGGCACAACTATCTTGATCTTATTG 1380
consensus_12590#1 ATGTCAAGCCCCTTGACAATCCAGAGCTTGAAAATTGGCACAACTATCTTGATCTTATTG 1237
************************************************************
consensus_12590#0 AGAAAGAAGAAGACATAAATAAGGTTATCAAGCTGTATGAAAGATGTGTTATTGCATGTG 1440
consensus_12590#1 AGAAAGAAGAAGACATAAATAAGGT-ATGCTTTTGCAATGGAAATAGTCCTTTACTTTT- 1295
************************* ** ** * * ** ** * * *
consensus_12590#0 CTAGTTATTCAGAGTTTTGGATCCGTTATGTGCTATGCATGGAAGCTAGAGGAAGCATAG 1500
consensus_12590#1 ----TCATTCAG-----TAGAC----TTCATGCAGTACCTGGAGTCT----------TGT 1332
* ****** * ** * *** * * **** ** *
consensus_12590#0 AACTAGCAAACAATGCTCTGGCTCGTGCCACT-CATGTTTTTGTCAAGAAGCAGGCAGAG 1559
consensus_12590#1 AACTTACAATTT-TAGTCTTATTGGCTCCATTATATGCTTT------------------- 1372
**** *** * *** * * *** * *** ***
consensus_12590#0 ATCCATCTGTTCAGTGCAAGATTCAAGGAGCTTAGTGGAGATGTCTCTGGAGCACGTGTA 1619
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GAATACCAGCATCTTTATTCTGATCTGTACCCTGGCCTTTTAGAAGCCATTGTTAAGCAT 1679
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 TCTAATATGGAGCACCGATTGGGAGATAAAGAATCTGCTTGCTCAATTTATGAGAAGGCC 1739
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 ATTGCCGCTGAAAAGGAAAAGGATCGGAGCCAGATTTTGCCTACTTTGCTGATTCAGTAC 1799
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 TCACGATTCTTATCTTTGGCCATCGGTGACATCGAGAAGGCAAAGGAGACGCTAACTGGT 1859
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 TTTCTCGAACAATGCGATTTGACAAAATCAATTATTGAGGCTATCATGCAACTAGAGTCG 1919
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 ATCCTTCCATCTGAAAAGCGTATTGAATTTTTAGATTCACTGGTCGAGAAGTTTCTTACA 1979
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GCTGAACCAACCGAAGGGGAAGTCACAAGTCTAGCTGACAAGGAAGACATATCTTCCATA 2039
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 TTTTTAGAGTTTTTGGATCTATTTGGGGATGCACAAGCGATCAAGAAGGCTACCAATCGG 2099
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 CATCTTACTCATTTTTCGTGGAAGAGAAGCATGCTGTCATCAAAGAAGCGAAGAGCTGAT 2159
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GATGTTATCATGTCAGACAGAGATAAATTGGCTAGGATTGGGGATGGTACTCAGCCAGTT 2219
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GTGGGAACTGATCCAAATGCTCATAATCCTCCAGTTTGGCCAGCGACATCTGAAGCATCG 2279
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GGCCAACAATGGGGAGCTGCTTATGCACCACAGGCCACTTATCCTGCGTATGGAACTTAC 2339
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GACTACAGCCATCAAATGCCTCAATCTGCTCCTCAAGCAGCTGCTTACGGTGCCTATCCT 2399
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 CCAACATACCCCGCTCAGGCCTACACACAACAAACCTATGCACAACCTTCAGCAATGGCG 2459
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GTGGCGGCACCAGCACCCGCAGTGGCACCGGCGGCAGCTTACCCTCAGCAACCTGTTGCA 2519
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GCTCAGCAACCATATTATGGAACAGGAACATACTACTGATCTGTAGACTGATTCAAGAGG 2579
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GTGCTACGAAAGTCTGTTTATTTGTTCTCGCGCTTGTATCGCTGCAGCCTAAATTAGCAT 2639
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 ATTTTACTGATGATACTGTAGGTCGAAGCCATGGCAGGACCCTTTGTATTAGTACTACTA 2699
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 GCGTTACCGGAAGACTAGTTAAGCACATGATTTGTATAGCACCTCGTGACATTTTCCTGC 2759
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 TAGCATAATGGTCCATTGTTTTCATCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2819
consensus_12590#1 ------------------------------------------------------------
consensus_12590#0 AAAAAA 2825
consensus_12590#1 ------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||