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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12597#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2244 fasta sequence
[CTCAGAAATGGAAGACGGAAGGATGAGGCTGCAAAAGAGCTGGAGGTTTTTTTGAGTGACAACAACGACGCATTTGTATCCTGGTTATGGGACCACCTCTCCTCAAATTTGCACCTTTATGTGCAACCCAAAGCTATCTCTTCAAATAATGAAGTTAATAGTACTCGGAGTAATGCTAGAGGAATGCCTGCACAAAATATGACTAGCAGCACACAAGCTATTCGTGAACCTGTAGCTGGCACTCAGAAGACAACGGGAATTCATCAGAGAAGGGAGTGGGGAGGAATTGTTCGAGACCAATCAGAAACAGTTCCCCTTCGAAGTGTTGTAACTACTGTTTTGCATGCAGAGGAAAAGGATGTTAATAAATCGCATGCCAGAAGACGAACCCACTCACCTGACATGCATCACCAAAGAAAGAGAAGCAGAGAAGATGATGAACGGCAAATCAAGAGAACATCACACCAAGATATTGATGCACCACGCCGGCTTCTTCAGTTTGCTGTTCGGGATGCTGTTAGACCTGTACAGCCCATAACCCCTAGGTCAGAATCAGCATCCAAACGACTTCGTTCTGTGGTGTCTACCATGCCATCGGATTCACCACTTGATGTCAGACTGCAGAGAACAAATTCAGATGTAAGAGTACCTGGTGTCACCGCAGCAGCATTAAGAGCTGCAGCTGAGGCTGCTGAAGATGTTCTGAAGGAGAAATACTCTGGAAGTGTGTTTAGGAGATTGGGTAGAAAGGGCATGGTGAATGCTGCTGAGGAATCCTTTGGTTTCAGTGAACAATGTCGAGAAAGAGAATATGGTGATATAGATAATGTCCAAGCAGAAAATCAACTAGATGTTCATGGAAGAAATCATTATGCAGGTGATGCTTATATGTATGACCGGGAGGCAGCCAAAGGCACTGATTCTGCATCAGATATCGATCGGCATGATGATACTGGTGCAGCTAGGTATAATGATTTGGTATCTTGCCGAAGTACATTGCCTTCTAGTATAGGCAAAGAATCAGTAGTAGCGGGGTTCAATACTGTTGAAGGAACTACAACCATTAGAAGCAGAAGGTCTATAATGCAGGACCCACATGCTAGTTCAGGGCGAGGACCATCTGAAAGGATTAACATGGTTAACAATATTACACAAAAGCCTGCCAACCAGGCAACAAGAAGGAATGCTGTGAAGATAGAGCCTCAAGTGCCCACAGAGATGAAACATACTGACTCAAGAAAGTCAACTGCGACACTTGCACATGTTAACAATACTCCAATGACTGACAAGTCCAAAGATTCAATGTGTTCAAGCTCTATGGTGGAGGAACAGAAGCTTCCATCACTTGCTGTTGGATCATGCAGTACAGGTCAGCCAGAAGGTGGCACTGATTCTAGAACAGTTTTTCTTTCCAATGTACATTTTGCTGCTACAAAAGATGCTCTTTCCCGTCATTTCAATAAGTTTGGAGCTGTGCTTAAAACTCTTATTGTGACTGATATTGCTGGTCAGCCAACAGGCTCAGCGTACATTGAATTCTTGCACAAAGAGTCAGCAGAACAAGCCCTAACTCTTGACAACACATCTTTTATGTCGCGCATGCTCAAGGTTGTTAGAAAGAACTCTCTCGAAGTGTCTCAACAGTCTGGCTGGCCCCGTGGTTCTCGGGGATCAACA-TTCCCTTCAAGACTCAC-TAGAACTGCATACCCAAGGCCAGCATTTCCTGGTGCTATGCGTGGGCGTCTACCACTCAGAGGTGGTG-CTCGGAGCTTACAATGGAAGCGTGATAATGCTGATACTGTCGATGCGGCAAAACCTGGTCACAGCACACCTATACCTACCGGTAATCAGTTGATAAGCCCAGTTGTGCGGAGCTTCACCTACACACGTGCTGAGCAAAAACAGGACGTTGGTGCGACCAT-TTGACTGCTCCTGATGAAACTCGCAGAAAGACCTCAGAATTAGT-GTTATCTC-ATAGT---TCCTCCTCTCGTAAATACTATTTATTTAGTTG-CAGAGC-TTAGTAACA-GGCTGGTTTTTGGAACTGAATTTGAGCCATGTTCTGTGACCA-GTTTTGTGTGCTTTTTTCCGGCCATCGCTCATGCTGTGCTGGCTACGCGAAGTTTGTGGATTGAAAAATCAGGGAAAAAAGAAAGGAAAGTAAAGGTTGTAGAATATGATGGGAACACCGCAACATTTAATATTATCGGTAGGTTATTCCACCCGAGGCATTTTATTTATTGATTG]
[+] EMBL CB633872 [CTCAGAAATGGAAGACGGAAGGATGAGGCTGCAAAAGAGCTGGAGGTTTTTTTGAGTGACAACAACGACGCATTTGTATCCTGGTTATGGGACCACCTCTCCTCAAATTTGCACCTTTATGTGCAACCCAAAGCTATCTCTTCAAATAATGAAGTTAATAGTACTCGGAGTAATGCTAGAGGAATGCCTGCACAAAATATGACTAGCAGCACACAAGCTATTCGTGAACCTGTAGCTGGCACTCAGAAGACAACGGGAATTCATCAGAGAAGGGAGTGGGGAGGAATTGTTCGAGACCAATCAGAAACAGTTCCCCTTCGAAGTGTTGTAACTACTGTTTTGCATGCAGAGGAAAAGGATGTTAATAAATCGCATGCCAGAAGACGAACCCACTCACCTGACATGCATCACCAAAGAAAGAGAAGCAGAGAAGATGATGAACGGCAAATCAAGAGAACATCACACCAAGATATTGATGCACCACGCCGGCTTCTTCAGTTTGCTGTTCGGGATGCTGTTAGACCTGTACAGCCCATAACCCCTAGGTCAGAATCAGCATCCAAACGACTTCGTTCTGTGGTGTCTACCATGCCATCGGATTCACCACTTGATGTCAGACTGCAGAGAACAAATTCAGATGTAAGAGTACCTGGTGTCACCGCAGCAGCATTAAGAGCTGCAGCTGAGGCTGCTGAAGATGTTCTGAAGGAGAAATACTCTGGAAGTGTGTTTAGGAGATTGGGTAGAAAGGGCATGGTGAATGCTGCTGAGGAATCCTTTGGTTTCAGTGAACAATGTCGAGAAAGAGA ]
[+] EMBL CB643004 [ CTTCCTCTTTTTGCTGTTCGGGATGCTGTTAGACCTGTACAGCCCATAACCCCTAGGTCAGAATCAGCATCCAAACGACTTCGTTCTGTGGTGTCTACCATGCCATCGGATTCACCACTTGATGTCAGACTGCAGAGAACAAATTCAGATGTAAGAGTACCTGGTGTCACCGCAGCAGCATTAAGAGCTGCAGCTGAGGCTGCTGAAGATGTTCTGAAGGAGAAATACTCTGGAAGTGTGTTTAGGAGATTGGGTAGAAAGGGCATGGTGAATGCTGCTGAGGAATCCTTTGGTTTCAGTGAACAAGGTCGAGAAAGAGAATATGGTGATATAGATAATGTCCAAGCAGAAAATCAACTAGATGTTCATGGAAGAAATCATTATGCAGGTGATGCTTATATGTATGACCGGGAGGCAGCCAAAGGCACTGATTCTGCATCAGATATCGATCGGCATGATGATACTGGTGCAGCTAGGTATAATGATTTGGTATCTTGCCGAAGTACATTGCCTTCTAGTATAGGCAAAGAATCAGTAGTAGCGGGGTTCAATACTGTTGAAGGAACTACAACCATTAGAAGCAGAAGGTCTATAATGCAGGACCCACATGCTAGTTCAGGGCGAGGACCATCTGAAAGGATTAACATGGTTAACAATATTACACAAAAGCCTGCCAACCAGGCAACAAGAAGGAATGCTGTGAAGATAGAGCCTCAAGTGCCCACAGAGATGAAACATACTGACTCAAG AAGTCAACTGCGACACTTGC ]
[+] EMBL OSR02781A [ CCACATGCTAGTTCAGGGCGAGGACCATCTGAAAGGATTAACATGGTTAACAATATTACACAAAAGCCTGCCAACCAGGCAACAAGAAGGAATGCTGTGAAGATAGAGCCTCAAGTGCCCACAGAGATGAAACATACTGACTCAAGAAAGTCAACTGCGACACTTGCACATGTTAACAATACTCCAATGACTGACAAGTCCAAAGATTCAATGTGTTCAAGCTCTATGGTGGAGGAACAGAAGCTTCCATCACTTGCTGTTGGATCATGCAGTACAGGTCAGCCAGAAGGTGGCACTGATTCTAGAACAGTTTTTCTTTCCAATGTACATTTTGCTGCTACAAAAGATGCTCTTTCCCGTCATTTCAATAAGTTTGGAGCTGTGCTTAAAACTCTTATTGTGACTGA ]
[+] EMBL CF324487 [ CTGTGAAGATAGAGCCTCAAGTGCCCACAGAGATGAAACATACTGACTCAAGAAAGTCAACTGCGACACTTGCACATGTTAACAATACTCCAATGACTGACAAGTCCAAAGATTCAATGTGTTCAAGCTCTATGGTGGAGGAACAGAAGCTTCCATCACTTGCTGTTGGATCATGCAGTACAGGTCAGCCAGAAGGTGGCACTGATTCTAGAACAGTTTTTCTTTCCAATGTACATTTTGCTGCTACAAAAGATGCTCTTTCCCGTCATTTCAATAAGTTTGGAGCTGTGCTTAAAACTCTTATTGTGACTGATATTGCTGGTCAGCCAACAGGCTCAGCGTACATTGAATTCTTGCACAAAGAGTCAGCAGAACAAGCCCTAACTCTTGACAACACATCTTTTATGTCGCGCATGCTCAAGGTTGTTAGAAAGAACTCTCTCGAAGTGTCTCAAC ]
[-] EMBL CB643005 [ CAATAAGTTTGGAGCTGTGCTTAAAACTCTTATTGTGACTGATATTGCTGGTCAGCCAACAGGCTCAGCGTACATTGAATTCTTGCACAAAGAGTCAGCAGAACAAGCCCTAACTCTTGACAACACATCTTTTATGTCGCGCATGCTCAAGGTTGTTAGAAAGAACTCTCTCGAAGTGTCTCAACAGTCTGGCTGGCCCCGTGGTTCTCGGGGATCAACA TTCCCTTCAAGACTCAC TAGAACTGCATACCCAAGGCCAGCATTTCCTGGTGCTATGCGTGGGCGTCTACCACTCAGAGGTGGTG CTCGGAGCTTACAATGGAAGCGTGATAATGCTGATACTGTCGATGCGGCAAAACCTGGTCACAGCACACCTATACCTACCGGTAATCAGTTGATAAGCCCAGTTGTGCGGAGCTTCACCTACACACGTGCTGAGCAAAAACAGGACGTTGGTGCGACCAT TTGACTGCTCCTGATGAAACTCGCAGAAAGACCTCAGAATTAGT GTTATCTC ATAGTTCCTCCTCCTCTCGTAAATACTATTTATTTAGTTG CAGAGC TTAGTAACA GGCTGGTTTTTGGAACTGAATTTGAGCCATGTTCTGTGACCA GTTTTGTGTGCTTTTTTCCGGCCATCGCTCATGCTGTGCTGGCTACGCGAAGTTTGTGGATTGAAAAATCAGGGAAAAAAGAAAGGAAAGTAAAGGTTGTAGAATATGATGGGAACACCGCAACATTTAATATTATCGGTAGGTTATTCCCTCCGAGGCATTTTATTTATTGATTG]
[-] EMBL CB633873 [ AAAACTCTTATTGTGACTGATATTGCTGGTCAGCCAACAGGCTCAGCGTACATTGAATTCTTGCACAAAGAGTCAGCAGAACAAGCCCTAACTCTTGACAACACATCTTTTATGTCGCGCATGCTCAAGGTTGTTAGAAAGAACTCTCTCGAAGTGTCTCAACAGTCTGGCTGGCCCCGTGGTTCTCGGGGATCAACA TTCCCTTCAAGACTCAC TAGAACTGCATACCCAAGGCCAGCATTTCCTGGTGCTATGCGTGGGCGTCTACCACTCAGAGGTGGTG CTCGGAGCTTACAATGGAAGCGTGATAATGCTGATACTGTCGATGCGGCAAAACCTGGTCACAGCACACCTATACCTACCGGTAATCAGTTGATAAGCCCAGTTGTGCGGAGCTTCACCTACACACGTGCTGAGCAAAAACAGGACGTTGGTGCGACCAT TTGACTGCTCCTGATGAAACTCGCAGAAAGACCTCAGAATTAGT GTTATCTC ATAGT TCCTCCTCTCGTAAATACTATTTATTTAGTTG CAGAGC TTAGTAACA GGCTGGTTTTTGGAACTGAATTTGAGCCATGTTCTGTGACCA GTTTTGTGTGCTTTTTTCCGGCCATCGCTCATGCTGTGCTGGTTTCGGGAAGTTTGTGGATTGAAAAATCAGGGAAAAAAGAAAGGAAAGTAAAGGTTGTAGAATATGATGGGAACAACGGAACATTTAATATTATCGGTA ]
[+] EMBL BQ906715 [ cgGGGGATCAACAGTTCCCNGCAAGACTCACGTAGAACTGCATACCCAAGGCCAGCATTTCCTGGTGCTATGCGTGGGCGTCTACCACTCAGAGGTGGTGTCTCGGAGCTTACAATGGAAGCGTGATAATGCTGATACTGTCGATGCGGCAAAACCTGGTCACAGCACACCTATACCTACCGGTAATCAGTTGATAAGCCCAGTTGTGCGGAGCTTCACCTACACACGTGCTGAGCAAAAACAGGACGTTGGTGCGACCAT TTGACTGCTCCTGATGAAACTCGCAGAAAGACCTCAGAATTAGT GTTATCTC ATAGT TCCTCCTCTCGTAAATACTATTTATTTAGTTG CAGAGC TTAGTAACACGGCTGGTTTTTGGAACTGAATTTGAGCCATGTTCTGTGACCACGTTTTGTGTGCTTTTTTCCGGCCATCGCTCATGCTGTGCTGGCTACGCGAAGTTTGTGGATTGAAAAATCAGGGAAAAAAGAAAGGAAAGTAAAGGTTGTAGAATATGATGGGAACACCGCAACATTTAATATTATCGGTAGGTTATT CACCCGGCGCATTTTATTTAaaaa ]
[+] EMBL BI809752 [ GTTGGTGCGACCATGTTGACTGCTCCTGATGAAACTCGCAGAAAGACCTCAGAATTAGTGGTTATCTCGATAGT TCCTCCTCTCGTAAATACTATTTATTTAGTTGTCAGAGCGTTAGTAACC GGCTGGTTTTTGGAACTGAATTTGAGCCATGTTCTGTGACCA GTTTTGTGTGCTTTTTTCCGGCCATCGCTCATGCTGTGCTGGCTACGCGAAGTTTGTGGATTGAAAAATCAGGGAAAAAAGAAAGGAAAGTAAAGGTTGTAGAAaaaaaaaa ]
[+] EMBL AU031658 [ TGCNCCTGATGAAACNCGCAGAAAGNCCTCAGAATTAGT GTTATCTC ATAGTTCCTCCTCCTCTCGTAAATACTATTTATTTAGTTG CAGAGC TTAGTAACA GGCTGGTTTTTGGAACTGAATTTGANCCATGTTCTGTGACCA GTTTTGTGTGCTTTTTTCCGGCCATCGCTCATGCTGTGCT GNTACGCGAAGTTTGTGGATTGAAAAATCAGGGAAAAAAGAAAGGAAAGTAAAGGTTGTAGAATATGATGGGAACACCGCAACATTTAATATTATCGGTAGGTTATTCaaaaa ]
consensusID : consensus_12597#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1644 fasta sequence
[CTCTCGAAGTGTCTCAACAGTCTGGCTGGCCCCGTGGTTCTCGGGGATCAACATTCCCTTCAAGACTCACTAGAACTGCATACCCAAGGCCAGCATTTCCTGGTGCTATGCGTGGGCGTCTACCACTCAGAGGTGGTGCTCGGAGCTTACAATGGATCGCTCGCCAGAGTTGCCCACCCCCTCTCGTCTGCTCCTTGCCCTTGCCATTCGAGGGCGATCGGTGCTCCCTCCGCCTCCGGACCGCCGCCGCCGCCGCCGGAGCCCTCTCCGGGGCGTCCCTGAGATTGTGTGCGCCAATGGCGCCTCACCACATTAATGGCCTTGCTGACGTTCGTGCAGTTGCGGAAATGTCACCTACACTTCCTACCATGATTATTAGAGTACCTTGTGAGCAGTCAGCCAATATTCACAGGCTACTGGAATTTGTTGAGGATCGTCTGGATCACGGTGCTCACGACTTGATTAAGGCAGAGGACATTCCCCGACTTCGAGCTATCGCCCAGGGAAACCTTACAAGTGCTGATGCTCCCCAGTTTTGTTTGTCATTGCTCAACGAGTCCCAGATCTACCTGCGGGTTCAACTGTTCTCGTCGAAGTGGATGATTGGGTGCGGCCACCCATCGACTCACGGGTAGTATCGGCAGTGGCTAGTGCGTTTCATCTTCCCCAGGATGGGGTGCTGCCTTTTGATCTCAACTCAACGACAGTGGCCCCAGATGGTCCAGGTGCAGGTCGTATTCATGCTGAACTTCTGATGCCACCAGGCAGCTTGCCTTTACCGCCTCCTGTTGTTGTCACAGTGTCAGGGTGTGAACCACTGAATGATGCGCGGGAACTTTATCAGTACCTGGAGGAGTACGTGAATCAAGAGGGCTGGATAGTTGATGACACACAGCTTGCGGGGCTTGCAGAGCTGGCTGAAGCTAGGGACGAGTTGGTAGGAGCTCGCGATAAGCTCACTACACTTGCATCAGATATTGGAGATGATCTTTTATTGGGAGGAGCGGTCACTGATGATGTACCGTTGTTATCTGGGGACTTCAAAGCAGCTTTGGCCAGGGTATTGAAGCTTCCTGAAGGTATGGAGCTTCCCAAGGACTTTGAATCACCTCTTCTTGTCCCTGCCATTGCTGGGAGGGAGAGAATTCATGGTGAACTCATCAATCTCCGAGCTGACCTGGCTGCTTTGAAGCAGCATGTTGAGGAGCAGTGGCTCCCATGGGCTAATGATCGTCTATCATCCGCTGGAGTCATCGGAGACCAGATTCTACTAGACATGGAGTGACACGGGCTAATAATGTTCGTCTCACATCTCTGATACATTCTACAAGACATGGACTGAGTCAGATTCTACAAGACATGGAGTGACACGGGCTAATAATGCTCGTCTCACCTCTCTGATACATTCTACAAGACTT-GGACTGAGTCGTTCCGTATAGGCCACACAAGAAGTGAGAAAGACGATGTACATTTCCTGCTGATTTCTAAGGATCAAACCATAGCTGTTATAGGAGATCTCCCAGAACTGAAACCTCAATTGCTATTACATAGTTCTATACTTGCAGAATGATTACGATGGATGCCCTTCCAAAATTTATGTGGCAATAGAAGATGCTTTTTAGTGGTTAGACCGAAAATTAATAA]
[+] EMBL AK109738 [CTCTCGAAGTGTCTCAACAGTCTGGCTGGCCCCGTGGTTCTCGGGGATCAACATTCCCTTCAAGACTCACTAGAACTGCATACCCAAGGCCAGCATTTCCTGGTGCTATGCGTGGGCGTCTACCACTCAGAGGTGGTGCTCGGAGCTTACAATGGATCGCTCGCCAGAGTTGCCCACCCCCTCTCGTCTGCTCCTTGCCCTTGCCATTCGAGGGCGATCGGTGCTCCCTCCGCCTCCGGACCGCCGCCGCCGCCGCCGGAGCCCTCTCCGGGGCGTCCCTGAGATTGTGTGCGCCAATGGCGCCTCACCACATTAATGGCCTTGCTGACGTTCGTGCAGTTGCGGAAATGTCACCTACACTTCCTACCATGATTATTAGAGTACCTTGTGAGCAGTCAGCCAATATTCACAGGCTACTGGAATTTGTTGAGGATCGTCTGGATCACGGTGCTCACGACTTGATTAAGGCAGAGGACATTCCCCGACTTCGAGCTATCGCCCAGGGAAACCTTACAAGTGCTGATGCTCCCCAGTTTTGTTTGTCATTGCTCAACGAGTCCCAGATCTACCTGCGGGTTCAACTGTTCTCGTCGAAGTGGATGATTGGGTGCGGCCACCCATCGACTCACGGGTAGTATCGGCAGTGGCTAGTGCGTTTCATCTTCCCCAGGATGGGGTGCTGCCTTTTGATCTCAACTCAACGACAGTGGCCCCAGATGGTCCAGGTGCAGGTCGTATTCATGCTGAACTTCTGATGCCACCAGGCAGCTTGCCTTTACCGCCTCCTGTTGTTGTCACAGTGTCAGGGTGTGAACCACTGAATGATGCGCGGGAACTTTATCAGTACCTGGAGGAGTACGTGAATCAAGAGGGCTGGATAGTTGATGACACACAGCTTGCGGGGCTTGCAGAGCTGGCTGAAGCTAGGGACGAGTTGGTAGGAGCTCGCGATAAGCTCACTACACTTGCATCAGATATTGGAGATGATCTTTTATTGGGAGGAGCGGTCACTGATGATGTACCGTTGTTATCTGGGGACTTCAAAGCAGCTTTGGCCAGGGTATTGAAGCTTCCTGAAGGTATGGAGCTTCCCAAGGACTTTGAATCACCTCTTCTTGTCCCTGCCATTGCTGGGAGGGAGAGAATTCATGGTGAACTCATCAATCTCCGAGCTGACCTGGCTGCTTTGAAGCAGCATGTTGAGGAGCAGTGGCTCCCATGGGCTAATGATCGTCTATCATCCGCTGGAGTCATCGGAGACCAGATTCTACTAGACATGGAGTGACACGGGCTAATAATGTTCGTCTCACATCTCTGATACATTCTACAAGACATGGACTGAGTCAGATTCTACAAGACATGGAGTGACACGGGCTAATAATGCTCGTCTCACCTCTCTGATACATTCTACAAGACTT GGACTGAGTCGTTCCGTATAGGCCACACAAGAAGTGAGAAAGACGATGTACATTTCCTGCTGATTTCTAAGGATCAAACCATAGCTGTTATAGGAGATCTCCCAGAACTGAAACCTCAATTGCTATTACATAGTTCTATACTTGCAGAATGATTACGATGGATGCCCTTCCAAAATTTATGTGGCAATAGAAGATGCTTTTTAGTGGTTAGACCGAAAATTAATAA]
[-] EMBL CA761283 [ TAGGGACGAGGTGGTAAGAGCTCGCGATAGGCTCCCTACACTTGCATGAGATATGGCAGATGATC TTTATTGGGGGGAGCGGTCACTGATGATGTACCGTTGTTATCTGGGGACTTCAAAGCAGCTTTGGCCAGGGTATTGAAGCTTCCTGAAGGTATGGAGCTTCCCAAGGACTGTGAATCACCTCTTCTTGCCCCTGCCATTGCTGGGAGGGAGAGAATTCATAGTGAACTCATCAGTCTCCGAGCTGACCTGGCTGCTTTGAAGCAGCATGTTGAGGAGCAGTGGCTCCCATGGGCTAATGATCGTCTATCATCCGCGGGAGTCATCGGAGACCAGATTTTACTAGACATGGAGTGACACGGGCTAATAATGTTCGTCTCACATCTNTGATACATTCTACAAGACATGGACTGAGTCAGATTCTACAAGACATGGAGTGACACGGGCTAATAATGCTCGTCTCACCTCTTTGATACATTCTACAAGACTTAGGACTGAGTCGTTCCGTATAGGCCACCCAAGAAGTGAGAAAGACGATGTACATTTCCTGCTGATTTCTAAGGATCAAACCATAGCTGTTATAGGAGATCTCCCAGAACTGAAACCTCAATTGCTATTACATAGTTCAATACTTGCAGAATGATTACGATGGATGCCCTTCCAAAAaaaaaaaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12597#0 CTCAGAAATGGAAGACGGAAGGATGAGGCTGCAAAAGAGCTGGAGGTTTTTTTGAGTGAC 60
consensus_12597#1 ------------------------------------------------------------
consensus_12597#0 AACAACGACGCATTTGTATCCTGGTTATGGGACCACCTCTCCTCAAATTTGCACCTTTAT 120
consensus_12597#1 ------------------------------------------------------------
consensus_12597#0 GTGCAACCCAAAGCTATCTCTTCAAATAATGAAGTTAATAGTACTCGGAGTAATGCTAGA 180
consensus_12597#1 ------------------------------------------------------------
consensus_12597#0 GGAATGCCTGCACAAAATATGACTAGCAGCACACAAGCTATTCGTGAACCTGTAGCTGGC 240
consensus_12597#1 ------------------------------------------------------------
consensus_12597#0 ACTCAGAAGACAACGGGAATTCATCAGAGAAGGGAGTGGGGAGGAATTGTTCGAGACCAA 300
consensus_12597#1 -----------------------------------------------CTCTCGAAGTGTC 13
****
consensus_12597#0 TCAGAAACAGTTCCCCTTCGAAGTGTTGTAACTACTGTTTTGCATGCAGAGGAAAAGGAT 360
consensus_12597#1 TCA---ACAGT-CTGGCTGGCCCCGTGGTTCTCGGGGATCAACATTCCCTTCAAGACT-C 68
*** ***** * * * ** ** * * *** * ** *
consensus_12597#0 GTTAATAAATCGCATGCCAGAAGACGAACCCACTCACCTGACATGCATCACCAAAGAAAG 420
consensus_12597#1 ACTAG--AACTGCATACCC-AAGGCCAGCATTTCCTGGTGCTATGCGTGGGC---GTCTA 122
** ** **** ** *** * * * * ** **** * * *
consensus_12597#0 AGAAGCAGAGAAGATGATGAACGGCAAATCAAGAGAACATCACACCAAGATATTGATGCA 480
consensus_12597#1 CCACTCAGAGGTGGTGCTCGGAGCTTA--CAATGGATCGCTCGCCAGAGTTGCCCACCCC 180
* ***** * ** * * * *** ** * * ** * * *
consensus_12597#0 C-CACGCCGGCTTCTTCAGTTTGCTGTTCGGGATGCTGTTAGACCTGTACAGCCCATAAC 539
consensus_12597#1 CTCTCGTCTGCTCCTTGCCCTTGCCATTCGAGG-GCGATCGGTGCT------CCCTCCGC 233
* * ** * *** *** **** **** * ** * * ** *** *
consensus_12597#0 CCCTAGGTCAGAATCAGCATCCAAACGACTTCGTTCTGTGGTGTCTACCATGCCATCGGA 599
consensus_12597#1 CTCCGGACCGCCGCC-GCCGCCGCCGGAGCCCTCTCCGGGGCGTC---CCTGAGATTGTG 289
* * * * * ** ** ** * ** * ** *** * ** ** *
consensus_12597#0 TTCACCACTTGATGTCAGACTGCAGAGAACAAATTCAGATGTAAGAGTACCTGGTGTCAC 659
consensus_12597#1 TGCGCCAAT-GGCGCCTCACCACA-----TTAATGGCCTTGCTGACGTTCGTGCAGTTGC 343
* * *** * * * * ** ** *** ** ** * ** ** *
consensus_12597#0 CGCAGCAGCATTAAGAGCTGCAGCTGAGGCTGCTGAAGATGTTCTGAAGGAGAAATACTC 719
consensus_12597#1 GGAAATGTCACCTACACTTCCTACCATGATTATTAGAGTACCTTGTGAGCAGTCAGCCAA 403
* * ** * * * * * * * * ** * ** ** * *
consensus_12597#0 TGGAAGTGTGTTTAGGAGATTGGGTAGAAAGGGCATGGTGAATGCTGCTGAGGAATCCTT 779
consensus_12597#1 TATTCACAGGCTACTGGAATTTGTTGAGGATCGTCTGGATCACGGTGCTCACGACTTGAT 463
* * * * *** * * * * *** * * **** * ** * *
consensus_12597#0 TGGTTTCAGTGAACAATGTCGAGAAAGAGAATATGGTGATATAGATAATGTCCAAGCAGA 839
consensus_12597#1 TAAGG-CAGAGGACATTCCCCGACTTCGAGCTATCGCC-CAGGGAAACCTTACAAGTGCT 521
* *** * *** * * *** * * ** * * ****
consensus_12597#0 AA-ATCAACTAGATGTTCATGGAAGAAATCATTATGCAGGTGATGCTTATATGTATGACC 898
consensus_12597#1 GATGCTCCCCAGTTTTGTTTGTCATTGCTCAACGAGTCCCAGATCTACCTGCGGGTTCAA 581
* * ** * * ** * *** * *** * * *
consensus_12597#0 GGGAGGCAGCCAAAGGCACTGATTCTGCATCAGATATCGATCGGCATGATGATACTGGTG 958
consensus_12597#1 CTGTTCTCGTCGAAGTGGATGATTGGGTG-CGGCCACCCATCGACTCACGGGTAGTATCG 640
* * * *** ***** * * * * * **** * * ** * *
consensus_12597#0 CAGCTAGGTATAATGATTTGGTATCTTGCCGA-AGTACATTGCCTTCTAGTATAGGCAAA 1017
consensus_12597#1 GCAGTGGCTAGTGCGTTTCATCTTCCCCAGGATGGGGTGCTGCCTTTTGATCTCAACTCA 700
* * ** * ** ** ** * ****** * * * * *
consensus_12597#0 GAATCAGTAGTAGCGGGGTTCAATACTGTTGAAGGAACTACAACCATTAGAAGCAGAAGG 1077
consensus_12597#1 ACGACAGTGGCCCCAGA---TGGTCCAGGTGCAGGTCGTATTCATGCTGAACTTCTGATG 757
**** * * * * * * ** *** ** * * * *
consensus_12597#0 TCTATAATGCAGGACCCACATGCTAGTTCAGGGCGAGGACCATCTGAAAGGATTAACATG 1137
consensus_12597#1 CC-ACCAGGCAGCTTGCCTTTACCGCCTCCTGTTGTTGTCACAGTGTCAGGGTGTGAACC 816
* * * **** * * * ** * * * * ** *** * *
consensus_12597#0 GTTAACAATATTACACAAAAGCCTGCCAACCAGGCAACAAGAAGGAATGCTGTGAAGATA 1197
consensus_12597#1 ACTG--AATGATGCGCGGGAACTTT---ATCAGT--ACCTGGAGGAGTAC-GTGAATCAA 868
* *** * * * * * * * *** ** * **** * * ***** *
consensus_12597#0 GAGCCTCAAGTGCCCACAGAGATGAAACATACTGACTCAAGAAAGTCAACTGCGACACTT 1257
consensus_12597#1 GAGGGCTGGATAGTTGATGACACACAGCTTGCGGGGCTTGCAGAGCTGGCTGAAGC-TAG 927
*** * ** * * * * * * * ** *** *
consensus_12597#0 GCACATGTTAACAATACTCCAATGACTGACAAGTCCAAAGATTCAATGTGTTCAAGCTCT 1317
consensus_12597#1 GGACGAGTTGGTAGGAGCTCGCGATAAGCTCACTACACTTGCATCAGATATTGGAG---- 983
* ** *** * * * * * * ** * * ** **
consensus_12597#0 ATGGTGGAGGAACAGAAGCTTCCATCACTTGCTGTTGGATCATGCAGTACAGGTCAGCCA 1377
consensus_12597#1 ATGATCTTTTATTGGGAGGAGCGGTCACT-GATGATGTACCGT-TGTTATCTGGGGACTT 1041
*** * * * ** * ***** * ** ** * * * ** * *
consensus_12597#0 GAAGGTGGCACTGATTCTAGAACAGTTTTTCTTTCCAATGTACATTTTGCTGCTACAAAA 1437
consensus_12597#1 CAAAGCAGCTTTGG--CCAGGGTATTGAAGCTTCCTGAAG-GTATGGAGCTTC--CCAAG 1096
** * ** ** * ** * * *** * * * ** *** * * **
consensus_12597#0 GATGCTCTTTCCCGTCATTTCAATAAGTTTGGAGCTGTGCTTAAAACTCTTATTGTGACT 1497
consensus_12597#1 GACTTTGAATCACCTCTTCTTGTCCCTGCCATTGCTGGGAGGGAGAGAATTCATGG---T 1153
** * ** * ** * * **** * * * ** ** *
consensus_12597#0 GATATTGCTGGTCAGCCAACAGGCTCAGCGTACATTGAATTCTTGCACAAAGAGTCAGCA 1557
consensus_12597#1 GAACTCATCAATCTCCGAGCTGACCTGGC-TGCTTTGAAGCAGCATGTTGAGGAGCAGTG 1212
** * ** * * * * * ** * * ***** ** ***
consensus_12597#0 GAACAAGCCCTAACTCTTGACAACACATCTTTTATGTCGCGCATGCTCAAGGTTGTTAGA 1617
consensus_12597#1 GC-----TCCCATGGGCTAATGAT-CGTCTATCAT-CCGCTGGAGTC----ATCGGAGAC 1261
* ** * * * * * *** * ** *** * * *
consensus_12597#0 AAGAACTCTCTCGAAGTGTCTCAACAGTCTGGCTGGCCCCGTGGTTCTCGGGGATC-AAC 1676
consensus_12597#1 CAGATTCTACTAGACATGGAGTGACA--CGGGCTAATAATGTTCGTCTCACATCTCTGAT 1319
*** ** ** ** *** * **** ** **** ** *
consensus_12597#0 ATTCCCTTCAAGACTC--ACTAGAACTGCATACCCAAGGCCAGCATTTCCTGGTGCTATG 1734
consensus_12597#1 ACATTCTACAAGACATGGACTGAGTCAGATTCTACAAGACATGGAGTGACACGGGCTAAT 1379
* ** ****** *** * * * **** * * * * * * ****
consensus_12597#0 CGTGGGCGTCT-ACCACTCAGAGGTGGTGCTCGGAGCTTACAATGGAA-GCGTGATAATG 1792
consensus_12597#1 AATGCTCGTCTCACCTCTCTGATACATTCTACAAGACTTGGACTGAGTCGTTCCGTATAG 1439
** ***** *** *** ** * * *** * ** * ** *
consensus_12597#0 CTGATACTGTCGATGCGGCAAAACCTGGTCACAGCACACCTATACCTACCGGTAATCAGT 1852
consensus_12597#1 GCCACACAAGAAGTGAGAAAGACGATGTACATTTCCTGCTGATTTCTA---AGGATCAAA 1496
* ** ** * * * ** ** * * ** *** ****
consensus_12597#0 TGATAAGCCCAGTTGTGCGGAGCTTCACCTACACACGTGCTGAGCAAAAACAGGACGTTG 1912
consensus_12597#1 CCATAG---CTGTTATAGGAGATCTCCC-----------------AGAACTGAAACCTCA 1536
*** * *** * * ** * * ** ** *
consensus_12597#0 GTGCGACCATTTGACTGCTCCTGATGAAACTCGCAGAAAGACCTCAGAATTAGTGTTATC 1972
consensus_12597#1 ATT--GCTATTACATAGTTCT-----ATACTTGCAGAATGA--TTACGATGGATGCCCTT 1587
* * *** * * ** * *** ****** ** * * ** ** *
consensus_12597#0 TCATAGTTCCTCCTCTCGTAAATACTATTTATTTAGTTGCAGAGCTTAGTAACAGGCTGG 2032
consensus_12597#1 CCAAAATTTATGTGGCAATAGAAGATGCTT-TTTAGTGGTTAGACCGAAAATTAATAA-- 1644
** * ** * ** * * ** ****** * * * * *
consensus_12597#0 TTTTTGGAACTGAATTTGAGCCATGTTCTGTGACCAGTTTTGTGTGCTTTTTTCCGGCCA 2092
consensus_12597#1 ------------------------------------------------------------
consensus_12597#0 TCGCTCATGCTGTGCTGGCTACGCGAAGTTTGTGGATTGAAAAATCAGGGAAAAAAGAAA 2152
consensus_12597#1 ------------------------------------------------------------
consensus_12597#0 GGAAAGTAAAGGTTGTAGAATATGATGGGAACACCGCAACATTTAATATTATCGGTAGGT 2212
consensus_12597#1 ------------------------------------------------------------
consensus_12597#0 TATTCCACCCGAGGCATTTTATTTATTGATTG 2244
consensus_12597#1 --------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||