cluster # 12601

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12601 cluster # 12601 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12601#0 length = 2155 sequences # 8
consensus_12601#1 length = 867 sequences # 1

consensus_12601#2 length = 767 sequences # 1
consensus_12601#3 length = 585 sequences # 1

consensusID : consensus_12601#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2155
fasta sequence

                              [CCACTCCCCCCCAAAAAAATCCAAACCGAGAAATAATAATCACAATAAAACTAAAAAGAAATCCGGGCCTAACGGGCCGCGCGGCCCAACCCCCAACCCCAACGTAATAACGTATCATTCCGCGTCTCGAACTTTCCACCTCTCCCAAATAATTTTCTTCTTTCCCCTTTTTTTCTCCTCTCCCCTTCGACTCAGTCTCGCACCGAAGAAGAAGAAGAGAGGAAGAAGACGCGACGATTGACGAGTAATCGAGCTCGATTTGAGCACCCCCGCGCGCGGATCCGCCGATCTAGTTCAGTGGAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGAGTTATGTTTCCAGGGGGAGCTCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTACGAGGATGCCCTGGCATTGAGCTTGAGGAAGCTCAAGCCGGAGGCCGCCTCGGATGTCCTCACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCTAACCTGATAACCGATCTCGAGCTGCCTGTCTCGGACTGGGATGACAAATGGGTGGACATTTATCTCAACAGCAGCGTGAAGCTGCT-GGATATTT-GCATCGCGCTGAGCTC-GGAGCTCTCTCGTCTGGATCAAGGGCAATTGCTGTTGCAGTATGCCCTGCATGTGTTGGGCTCGGAGAGTGGCGTGCCGTCGCAGGAGCAACTCAAGAGAGCTGAGCCATCACTTAGGGAGTGGATGGAGCTGGTGGGCGTAAGATGTGCAAGGCTTGTTAGCTGCTCGGCGACCTTGCAGGAGCTTGCTGGGAACCTTTCTCTGATGAAGGTCAAGAACTCCGCGAAAGGGAAAGTGCTCATGAGAGCGTTATATGGAATCGAGTCTGTGACGGTGTTCGTATGCAGTATTTTTGTAGCTGTACTGTCTGGCAGCCCCAAGCCACTGGTGGAGTTGCATGTCCCTGAAAAATTTGGTTGGTCTCAGGCCTTCAATGACCTTCATACTGCAGTCAGTGAGGAACTCACAAGACAATTATCCGGTGGAAGTGTTGCAGCTGTAAAAGAGCTGGAAGAAGTTGAAGCATGTGCTAGAAGGCTGCATGTTTTGGCTAGCACTTCTCAGCTTGAAGAAGAAGCTGCCAACCTGGCAAATGCTGTTAGCCATACAGAGGAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACTGTGGTCTTAAACTTGCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTATTGCAGAAGGGGGAACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAGTGGCAATGGTTGAGAGAATCAGTTACAAAGAGCACCAAGATAGTAACGTAAAGCAGGCGAATGGCAGCAGCGATGAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCAAGGAGGAACTATTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGTTGGACTCCCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTTATGTAAGGTTTCTTGCCGTATAATGT-TTGTGTGGCTAAGT-GTGCGCCCAGCTTGGTAGCA-CAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCT-GCTAGTTGTGCTTGT-GCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCG-TTGT-AGCGCAGGTCATA-TGCGAGTGT-ATA-GAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCAATATA-CGAGTAGATTAATGTGTTCTGCAAAGAGCAGATCATTGTGTGCTATTGCTGAA-CTAGCCAATGATATGGCCAACTTGTATTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK102890             [CCACTCCCCCCCAAAAAAATCCAAACCGAGAAATAATAATCACAATAAAACTAAAAAGAAATCCGGGCCTAACGGGCCGCGCGGCCCAACCCCCAACCCCAACGTAATAACGTATCATTCCGCGTCTCGAACTTTCCACCTCTCCCAAATAATTTTCTTCTTTCCCCTTTTTTTCTCCTCTCCCCTTCGACTCAGTCTCGCACCGAAGAAGAAGAAGAGAGGAAGAAGACGCGACGATTGACGAGTAATCGAGCTCGATTTGAGCACCCCCGCGCGCGGATCCGCCGATCTAGTTCAGTGGAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGAGTTATGTTTCCAGGGGGAGCTCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTACGAGGATGCCCTGGCATTGAGCTTGAGGAAGCTCAAGCCGGAGGCCGCCTCGGATGTCCTCACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCTAACCTGATAACCGATCTCGAGCTGCCTGTCTCGGACTGGGATGACAAATGGGTGGACATTTATCTCAACAGCAGCGTGAAGCTGCT GGATATTT GCATCGCGCTGAGCTC GGAGCTCTCTCGTCTGGATCAAGGGCAATTGCTGTTGCAGTATGCCCTGCATGTGTTGGGCTCGGAGAGTGGCGTGCCGTCGCAGGAGCAACTCAAGAGAGCTGAGCCATCACTTAGGGAGTGGATGGAGCTGGTGGGCGTAAGATGTGCAAGGCTTGTTAGCTGCTCGGCGACCTTGCAGGAGCTTGCTGGGAACCTTTCTCTGATGAAGGTCAAGAACTCCGCGAAAGGGAAAGTGCTCATGAGAGCGTTATATGGAATCGAGTCTGTGACGGTGTTCGTATGCAGTATTTTTGTAGCTGTACTGTCTGGCAGCCCCAAGCCACTGGTGGAGTTGCATGTCCCTGAAAAATTTGGTTGGTCTCAGGCCTTCAATGACCTTCATACTGCAGTCAGTGAGGAACTCACAAGACAATTATCCGGTGGAAGTGTTGCAGCTGTAAAAGAGCTGGAAGAAGTTGAAGCATGTGCTAGAAGGCTGCATGTTTTGGCTAGCACTTCTCAGCTTGAAGAAGAAGCTGCCAACCTGGCAAATGCTGTTAGCCATACAGAGGAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACTGTGGTCTTAAACTTGCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTATTGCAGAAGGGGGAACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAGTGGCAATGGTTGAGAGAATCAGTTACAAAGAGCACCAAGATAGTAACGTAAAGCAGGCGAATGGCAGCAGCGATGAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCAAGGAGGAACTATTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGTTGGACTCCCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTTATGTAAGGTTTCTTGCCGTATAATGT TTGTGTGGCTAAGT GTGCGCCCAGCTTGGTAGCA CAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCT GCTAGTTGTGCTTGT GCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCG TTGT AGCGCAGGTCATA TGCGAGTGT ATA GAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCAATATA CGAGTAGATTAATGTGTTC                                                                                         ]
[+] EMBL AU055880             [                                                                                                                                                               CTTTCCCCTTTTTTTCTCCTCTCCCCTTCGACTCAGTCTCGCACCGAAGAAGAAGAAGAGAGGAAGAAGACGCGACGATTGACGAGTAATCGAGCTCGATTTGAGCACCCCCGCGCGCGGATCCGCCGATCTAGTTCAGTGGAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGAGTTATGTTTCCAGGGGGAGCTCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTACGAGGATGCCCTGGCATTGAGCTTGAGGAAGCTCAAGCCGGAGGNCGCCTCGGATGTCCTCACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCTAACCTGATAACCGATCTCGAGCTGCCTGTCTCGGACTGGGATGACAAATGGGTGGACATTTATCTCAACAGCAGCGTGAAGCTGCTGGGATATTTGGCATCGTGCTGAGCTCGGGAGCTCTCTCGTCTGGATCAAGGGCAATTGCTGTTGCAGTATGCCCTGCATGTGTTGGGCTCGGAGAGTGGCGTGCCGTCGCAGGAGCAACTCAAGAGAGCTGAGCCATCACTTAGGGAGTGGATGGAGCTGGTGGGCGTAAGATGTGCAAGGCTTGTTAGCTGCTCGGCGACCTTGCANGAGCTTGCTGGGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB645359             [                                                                                                                                                                TTTCCCCTTTGTTTCTCCTCTCCCCTTCGACTCAGTCTCGCACCGAAGAAGAAGAAGAGAGGAAGAAGACGCGACGATTGACGAGTAATCGAGCTCGATTTGAGCACCCCCGCGCGCGGATCCGCCGATCTAGTTCAGTGGAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGAGTTATGTTTCCAGGGGGAGCTCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTACGAGGATGCCCTGGCATTGAGCTTGAGGAAGCTCAAGCCGGAGGCCGCCTCGGATGTCCTCACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCTAACCTGATAACCGATCTCGAGCTGCCTGTCTCGGACTGGGATGACAAATGGGTGGACATTTATCTCAACAGCAGCGTGAAGCTGCT GGATATTT GCATCGCGCTGAGCTC GGAGCTCTCTCGTCTGGATCAAGGGCAATTGCTGTTGCAGTATGCCCTGCATGTGTTGGGCTCGGAGAGTGGCGTGCCGTCGCAGGAGCAACTCAAGAGAGCTGAGCCATCACTTAGGGAGTGGATGGAGCTGGTGGGCGTAAGATGTGCAAGGCTTGTTAGCTGCTCGGCGACCTTGCAGGAGCTTGCTGGGAACCTTTCTCTGATGAAGGTCAAGAACTCCGCGAAAGGGAAAGTGCTCATGAGAGCGTTATATGGAATCGAGTCTGTGACGGTGTTCGTATGCAGTATTTTTGTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU057003             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACTATTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGTTGGACTCCCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTTATGTAAGGTTTCTTGCCGTATAATGT TTGTGTGGCTAAGT GTGCGCCCAGCTTGGTAGCA CAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGGCTAGTTGTGCTTGT GCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCG TTGT AGCGCAGGTCATA TGCGAGTGT ATA GAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCAATATA CGAGTAGATTAATGTGTTCTGCAAA                                                                                   ]
[+] EMBL BQ906110             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGCTCCGGCATGGGTTGGACTCCCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCAGGATCTCGGATGCAGCAAGCAAGGTCGCCGAGGTCAGTTCTTGATATGCTATGTAAGGTTTCCTGACGTGTAATGT TTATGTGGCT AGT GTGTGCACAGCTCGGCAGCA CAGCTTTGTACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACGGAAAGTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAATCCTGTGCT GCTAGTTGTGCTTGT GCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCG TTGT AGCGCAGGTCATA TGCGAGTGT ATA GAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCAATATA CGAGTAGATTAATGTGTTCTGCAAAGACCAGATCATTGTGTGCTATTGCTGAACCCCCCCAATGATATGGCCAACTTGTATTAAAAAAA                   ]
[+] EMBL AU055881             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTTATGTAAGGTTTCTTGCCGTATAATGT TTGTGTGGCTAAGT GTGCGCCCAGCTTGGTAGCA CAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCTGGGGCCACATCTCAGAAGCNTTGTGCATAGTCCTGTGCT GCTAGTTGTGCTTGT GCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCG TTGT AGCGCAGGTCATA TGCGAGTGT ATA GAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCAATATA CGAGTAGATTAATGTGTTCTGCAAAGAGCAGATCATTGTGTGCTATTGCTGAA CTAGCAAATGATATGGCCAACTTGTNTTCAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BQ907386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGTGTTATGTGGCT AGTGGTGTGCACAGCTCGGCAGCANCAGCTTTGTACCTTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACGGAAAGTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAATCCTGTGCT GCTAGTTGTGCTTGTGGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCGCTTGT AGCGCAGGTCATATTGCGAGTGT ATA GAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCCATATACCGAGTAGATTAATGTGTTCTGCCAAGAGCAGATCCTTGTGTGCTATTGCTGAA CTAGCCAATGATATGGCCCACTTGTATTAAAAAAAAAA                ]
[+] EMBL BI807805             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAGTTAGTGCTCTACTCG TTGTGAGCGCAGGTCATA TGCGAGTGTGATATGAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCAATATA CGAGTAGATTAATGTGTTCTGCAAAGAGCAGATCATTGTGTGCTATTGCTGAA CTAG CAATGATATGGCCAACTTGTATTAAAAAAAAA                 ]




>consensus_12601#0
CCACTCCCCCCCAAAAAAATCCAAACCGAGAAATAATAATCACAATAAAACTAAAAAGAA
ATCCGGGCCTAACGGGCCGCGCGGCCCAACCCCCAACCCCAACGTAATAACGTATCATTC
CGCGTCTCGAACTTTCCACCTCTCCCAAATAATTTTCTTCTTTCCCCTTTTTTTCTCCTC
TCCCCTTCGACTCAGTCTCGCACCGAAGAAGAAGAAGAGAGGAAGAAGACGCGACGATTG
ACGAGTAATCGAGCTCGATTTGAGCACCCCCGCGCGCGGATCCGCCGATCTAGTTCAGTG
GAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGA
GTTATGTTTCCAGGGGGAGCTCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTAC
GAGGATGCCCTGGCATTGAGCTTGAGGAAGCTCAAGCCGGAGGCCGCCTCGGATGTCCTC
ACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCT
AACCTGATAACCGATCTCGAGCTGCCTGTCTCGGACTGGGATGACAAATGGGTGGACATT
TATCTCAACAGCAGCGTGAAGCTGCTGGATATTTGCATCGCGCTGAGCTCGGAGCTCTCT
CGTCTGGATCAAGGGCAATTGCTGTTGCAGTATGCCCTGCATGTGTTGGGCTCGGAGAGT
GGCGTGCCGTCGCAGGAGCAACTCAAGAGAGCTGAGCCATCACTTAGGGAGTGGATGGAG
CTGGTGGGCGTAAGATGTGCAAGGCTTGTTAGCTGCTCGGCGACCTTGCAGGAGCTTGCT
GGGAACCTTTCTCTGATGAAGGTCAAGAACTCCGCGAAAGGGAAAGTGCTCATGAGAGCG
TTATATGGAATCGAGTCTGTGACGGTGTTCGTATGCAGTATTTTTGTAGCTGTACTGTCT
GGCAGCCCCAAGCCACTGGTGGAGTTGCATGTCCCTGAAAAATTTGGTTGGTCTCAGGCC
TTCAATGACCTTCATACTGCAGTCAGTGAGGAACTCACAAGACAATTATCCGGTGGAAGT
GTTGCAGCTGTAAAAGAGCTGGAAGAAGTTGAAGCATGTGCTAGAAGGCTGCATGTTTTG
GCTAGCACTTCTCAGCTTGAAGAAGAAGCTGCCAACCTGGCAAATGCTGTTAGCCATACA
GAGGAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACTGTGGTCTTAAA
CTTGCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTATTGCAGAAGGG
GGAACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAGTGGCAATGGTT
GAGAGAATCAGTTACAAAGAGCACCAAGATAGTAACGTAAAGCAGGCGAATGGCAGCAGC
GATGAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCAAGGAGGAACTA
TTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGTTGGACTCC
CTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTC
TGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTT
ATGTAAGGTTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAGCTTGGTAGCA
CAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCT
GGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTGTGCTTGTGCCGTG
CAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTTGTCAAGTC
CTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCGTTGTAGCGCAG
GTCATATGCGAGTGTATAGAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTA
GCAATATACGAGTAGATTAATGTGTTCTGCAAAGAGCAGATCATTGTGTGCTATTGCTGA
ACTAGCCAATGATATGGCCAACTTGTATTAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12601#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 867
fasta sequence

                              [ATCCCCGGGCTGAGGAAGTCGGCACGAGGGGAAGAAGACGCGACGATTGACGAGGTATCGAGCTCGAGCTGAGCCTTCCCGCGCGCGGATTCGCCGATCGAGTTCAGTGGAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGAGTTATGTTTCCGGGGGGAGCCCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTATGAGGATGCCCTGGCATTGAGCTTAAGGAAGCTCAAGCCGGAGGCCGCCTCGGATGTCCTCACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCGAACCTGATAACCGATCTCGAGCTGCCTGTCTCGGATTGGGATGACCAATGGGTGGACATCTATCTCAACAGCAGCCTGAAGCTGCTGGATATTTGCATCGCGCTGAGCTCAGAGCTGTCTCGTTGGGATCCAGGGCAGTTGCTTCTGCAGTATGCCCTGCATGTGTGGGGCTCGGAAAGTGGTGTGCCGTCGCCAGAGCCACTCCAGAGAACTGAGCCATTCCTTAGGGAGTGGATGAGCTGGTGGGCGTTGATGTCCAGGGCTGTTACCTGCCCACGACTTGCAGGACCCGCCGGGACCCTCTCGATTAAGGTAAACCCCGTGAAGGAAAGTGCCTTAGACCTATTGANTCAGTGGTACGGTCCATCNATTTGGTCGGATCGTGCCCCAACANGGTAGTCATCTCAAACGCGCTGCCCCCAACGCCATTTCGTTAACAAGGAACCGAGTTTCCAACGAAATCCTCTGGCTTCCNTTAAACCCCNGCCAGAGGTTGAACCGCAAATAAGAACGCACCT]

[+] EMBL CA753338             [ATCCCCGGGCTGAGGAAGTCGGCACGAGGGGAAGAAGACGCGACGATTGACGAGGTATCGAGCTCGAGCTGAGCCTTCCCGCGCGCGGATTCGCCGATCGAGTTCAGTGGAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGAGTTATGTTTCCGGGGGGAGCCCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTATGAGGATGCCCTGGCATTGAGCTTAAGGAAGCTCAAGCCGGAGGCCGCCTCGGATGTCCTCACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCGAACCTGATAACCGATCTCGAGCTGCCTGTCTCGGATTGGGATGACCAATGGGTGGACATCTATCTCAACAGCAGCCTGAAGCTGCTGGATATTTGCATCGCGCTGAGCTCAGAGCTGTCTCGTTGGGATCCAGGGCAGTTGCTTCTGCAGTATGCCCTGCATGTGTGGGGCTCGGAAAGTGGTGTGCCGTCGCCAGAGCCACTCCAGAGAACTGAGCCATTCCTTAGGGAGTGGATGAGCTGGTGGGCGTTGATGTCCAGGGCTGTTACCTGCCCACGACTTGCAGGACCCGCCGGGACCCTCTCGATTAAGGTAAACCCCGTGAAGGAAAGTGCCTTAGACCTATTGANTCAGTGGTACGGTCCATCNATTTGGTCGGATCGTGCCCCAACANGGTAGTCATCTCAAACGCGCTGCCCCCAACGCCATTTCGTTAACAAGGAACCGAGTTTCCAACGAAATCCTCTGGCTTCCNTTAAACCCCNGCCAGAGGTTGAACCGCAAATAAGAACGCACCT]




>consensus_12601#1
ATCCCCGGGCTGAGGAAGTCGGCACGAGGGGAAGAAGACGCGACGATTGACGAGGTATCG
AGCTCGAGCTGAGCCTTCCCGCGCGCGGATTCGCCGATCGAGTTCAGTGGAGATGAGTCG
CGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGAGTTATGTTTCC
GGGGGGAGCCCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTATGAGGATGCCCT
GGCATTGAGCTTAAGGAAGCTCAAGCCGGAGGCCGCCTCGGATGTCCTCACCTTGTCATG
GATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCGAACCTGATAAC
CGATCTCGAGCTGCCTGTCTCGGATTGGGATGACCAATGGGTGGACATCTATCTCAACAG
CAGCCTGAAGCTGCTGGATATTTGCATCGCGCTGAGCTCAGAGCTGTCTCGTTGGGATCC
AGGGCAGTTGCTTCTGCAGTATGCCCTGCATGTGTGGGGCTCGGAAAGTGGTGTGCCGTC
GCCAGAGCCACTCCAGAGAACTGAGCCATTCCTTAGGGAGTGGATGAGCTGGTGGGCGTT
GATGTCCAGGGCTGTTACCTGCCCACGACTTGCAGGACCCGCCGGGACCCTCTCGATTAA
GGTAAACCCCGTGAAGGAAAGTGCCTTAGACCTATTGANTCAGTGGTACGGTCCATCNAT
TTGGTCGGATCGTGCCCCAACANGGTAGTCATCTCAAACGCGCTGCCCCCAACGCCATTT
CGTTAACAAGGAACCGAGTTTCCAACGAAATCCTCTGGCTTCCNTTAAACCCCNGCCAGA
GGTTGAACCGCAAATAAGAACGCACCT

consensusID : consensus_12601#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 767
fasta sequence

                              [TTAGCCATACAGAGGAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACTGTGGTCTTAAACTTGCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTATTGCAGAAGGGGGAACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAGTGGCAATGGTTGAGAGAATCAGTTACAAAGAGCACCAAGATAGTAACGTAAAGCAGGCGAATGGCAGCAGCGATGAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCAAGGAGGAACTATTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGTTGGACTCCCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTTATGTAAGGTTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAGCTTGGTAGCACAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTGTGCTTGTGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTGGGCAAGTCCTATACAGTCATTTTGTTTACTTAAAAAAAAAGGGA]

[-] EMBL CB645360             [TTAGCCATACAGAGGAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACTGTGGTCTTAAACTTGCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTATTGCAGAAGGGGGAACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAGTGGCAATGGTTGAGAGAATCAGTTACAAAGAGCACCAAGATAGTAACGTAAAGCAGGCGAATGGCAGCAGCGATGAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCAAGGAGGAACTATTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGTTGGACTCCCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTTATGTAAGGTTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAGCTTGGTAGCACAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTGTGCTTGTGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTGGGCAAGTCCTATACAGTCATTTTGTTTACTTAAAAAAAAAGGGA]




>consensus_12601#2
TTAGCCATACAGAGGAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACT
GTGGTCTTAAACTTGCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTA
TTGCAGAAGGGGGAACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAG
TGGCAATGGTTGAGAGAATCAGTTACAAAGAGCACCAAGATAGTAACGTAAAGCAGGCGA
ATGGCAGCAGCGATGAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCA
AGGAGGAACTATTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATG
GGTTGGACTCCCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTG
ATGCATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCT
CTTGATATTTTATGTAAGGTTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCA
GCTTGGTAGCACAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACA
GAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTGTG
CTTGTGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGC
CTGGGCAAGTCCTATACAGTCATTTTGTTTACTTAAAAAAAAAGGGA

consensusID : consensus_12601#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 585
fasta sequence

                              [GCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTTATGTAAGGTTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAGCTTGGTAGCACAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTGTGCTTGTGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGACTCTGTGACTGTAAACTCAGCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCGTTGTAGCGCAGGTCATATGCGAGTGTATAGAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCAATATACGAGTAGATTAATGTGTTCTGCAAAGAGCAGATCATTGTGTGCTATTGCTGAACTAGCAAATGATATGGCCAACTTGTATTCATCGTGTGATTCTGATTGCTTGGCT]

[+] EMBL AK063863             [GCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTTATGTAAGGTTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAGCTTGGTAGCACAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTGTGCTTGTGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGACTCTGTGACTGTAAACTCAGCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCGTTGTAGCGCAGGTCATATGCGAGTGTATAGAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCAATATACGAGTAGATTAATGTGTTCTGCAAAGAGCAGATCATTGTGTGCTATTGCTGAACTAGCAAATGATATGGCCAACTTGTATTCATCGTGTGATTCTGATTGCTTGGCT]




>consensus_12601#3
GCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGCAACCTCA
GGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGATATTTTATGTAAGGTT
TCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAGCTTGGTAGCACAGCTTTGAA
CATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAAACTAAGCTGGGGCCACAT
CTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTGTGCTTGTGCCGTGCAAATCTTCT
AAGTCCATCGGCATCAGACTCTGTGACTGTAAACTCAGCCTTGTCAAGTCCTATACAGTC
ATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCGTTGTAGCGCAGGTCATATGCG
AGTGTATAGAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGAGTGTGTTAGCAATATACG
AGTAGATTAATGTGTTCTGCAAAGAGCAGATCATTGTGTGCTATTGCTGAACTAGCAAAT
GATATGGCCAACTTGTATTCATCGTGTGATTCTGATTGCTTGGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      CCACTCCCCCCCAAAAAAATCCAAACCGAGAAATAATAATCACAATAAAACTAAAAAGAA 60
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      ATCCGGGCCTAACGGGCCGCGCGGCCCAACCCCCAACCCCAACGTAATAACGTATCATTC 120
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      CGCGTCTCGAACTTTCCACCTCTCCCAAATAATTTTCTTCTTTCCCCTTTTTTTCTCCTC 180
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      TCCCCTTCGACTCAGTCTCGCACCGAAGAAGAAGAAGAGAGGAAGAAGACGCGACGATTG 240
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      ACGAGTAATCGAGCTCGATTTGAGCACCCCCGCGCGCGGATCCGCCGATCTAGTTCAGTG 300
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGA 360
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GTTATGTTTCCAGGGGGAGCTCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTAC 420
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GAGGATGCCCTGGCATTGAGCTTGAGGAAGCTCAAGCCGGAGGCCGCCTCGGATGTCCTC 480
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      ACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCT 540
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      AACCTGATAACCGATCTCGAGCTGCCTGTCTCGGACTGGGATGACAAATGGGTGGACATT 600
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      TATCTCAACAGCAGCGTGAAGCTGCTGGATATTTGCATCGCGCTGAGCTCGGAGCTCTCT 660
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      CGTCTGGATCAAGGGCAATTGCTGTTGCAGTATGCCCTGCATGTGTTGGGCTCGGAGAGT 720
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GGCGTGCCGTCGCAGGAGCAACTCAAGAGAGCTGAGCCATCACTTAGGGAGTGGATGGAG 780
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      CTGGTGGGCGTAAGATGTGCAAGGCTTGTTAGCTGCTCGGCGACCTTGCAGGAGCTTGCT 840
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GGGAACCTTTCTCTGATGAAGGTCAAGAACTCCGCGAAAGGGAAAGTGCTCATGAGAGCG 900
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      TTATATGGAATCGAGTCTGTGACGGTGTTCGTATGCAGTATTTTTGTAGCTGTACTGTCT 960
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GGCAGCCCCAAGCCACTGGTGGAGTTGCATGTCCCTGAAAAATTTGGTTGGTCTCAGGCC 1020
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      TTCAATGACCTTCATACTGCAGTCAGTGAGGAACTCACAAGACAATTATCCGGTGGAAGT 1080
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GTTGCAGCTGTAAAAGAGCTGGAAGAAGTTGAAGCATGTGCTAGAAGGCTGCATGTTTTG 1140
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      -------------------------------------------------TTAGCCATACA 11
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GCTAGCACTTCTCAGCTTGAAGAAGAAGCTGCCAACCTGGCAAATGCTGTTAGCCATACA 1200
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      GAGGAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACTGTGGTCTTAAA 71
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GAGGAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACTGTGGTCTTAAA 1260
consensus_12601#1      ------------------------------------------------------------
                                                                                   

consensus_12601#2      CTTGCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTATTGCAGAAGGG 131
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      CTTGCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTATTGCAGAAGGG 1320
consensus_12601#1      ---------------------ATCCCCGGGCTGAGGAAGTCGGCACGAGGGGAAGAAGAC 39
                                                                                   

consensus_12601#2      GGAACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAGTGGCAATGGTT 191
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GGAACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAGTGGCAATGGTT 1380
consensus_12601#1      GCGACGATTGACGAGGTATCGAGCTCGAGCTGAGCCTTCCCGCGCGCGGATTCGCCGATC 99
                                                                                   

consensus_12601#2      GAGAGAATCAGTTACAAAGAGCAC-CAAGATAGTAACGTAAAGCAGGCGAATGGCAGCAG 250
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      GAGAGAATCAGTTACAAAGAGCAC-CAAGATAGTAACGTAAAGCAGGCGAATGGCAGCAG 1439
consensus_12601#1      GAGTTCAGTGGAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAA 159
                                                                                   

consensus_12601#2      CGATGAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCAAGGAGGAACT 310
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      CGATGAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCAAGGAGGAACT 1499
consensus_12601#1      TCCCTTTCGAGTTATGTTTCCGGGGGGAGCCCACCTATCTCGGAAGCTCCAAGAGTTGCT 219
                                                                                   

consensus_12601#2      ATTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGTTGGACTC 370
consensus_12601#3      ------------------------------------------------------------
consensus_12601#0      ATTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGTTGGACTC 1559
consensus_12601#1      CGCTTCGTATGAGGATGCCCTGGCATTGAGCTTAAGGAAGCTCAAGCCGGAGGCCGCCTC 279
                                                                                   

consensus_12601#2      CCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATT-GC 429
consensus_12601#3      -----------GCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATT-GC 48
consensus_12601#0      CCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATT-GC 1618
consensus_12601#1      ---------GGATGTCCTCACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGA 330
                                    **   *  *** *    ***   **** * *    *      *  * 

consensus_12601#2      TCTGCAACCTCAGGATCTCAGATGCAGCAAGCAA-----GGTCGCCGAGGTCAGCTCTTG 484
consensus_12601#3      TCTGCAACCTCAGGATCTCAGATGCAGCAAGCAA-----GGTCGCCGAGGTCAGCTCTTG 103
consensus_12601#0      TCTGCAACCTCAGGATCTCAGATGCAGCAAGCAA-----GGTCGCCGAGGTCAGCTCTTG 1673
consensus_12601#1      GCTGCA-CACCAACATAGCGAACCTGATAACCGATCTCGAGCTGCCTGTCTCGGATTGGG 389
                        ***** *  **  **  *  *      ** * *      *  ***    ** * *   *

consensus_12601#2      ATATTTTATGTAAGG---TTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAG 541
consensus_12601#3      ATATTTTATGTAAGG---TTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAG 160
consensus_12601#0      ATATTTTATGTAAGG---TTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAG 1730
consensus_12601#1      ATGACCAATGGGTGGACATCTATCTCAACAGCAGCCTGAAGCTGCTGGATATTTGCATCG 449
                       **     ***   **   * * *  *   *  *   *   *  ***   * *  **   *

consensus_12601#2      CTTGGTAGCACAGCTTTGAA-CATTGTGCTTCTGACCTGTGGCCCCTGC--TCAGCCCCA 598
consensus_12601#3      CTTGGTAGCACAGCTTTGAA-CATTGTGCTTCTGACCTGTGGCCCCTGC--TCAGCCCCA 217
consensus_12601#0      CTTGGTAGCACAGCTTTGAA-CATTGTGCTTCTGACCTGTGGCCCCTGC--TCAGCCCCA 1787
consensus_12601#1      CGCTG-AGCTCAGAGCTGTCTCGTTGGGATCCAGGGCAGTTGCTTCTGCAGTATGCCCTG 508
                       *   * *** ***   **   * *** * * * *  * ** **  ****  *  ****  

consensus_12601#2      CAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTG 658
consensus_12601#3      CAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTG 277
consensus_12601#0      CAGAAACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTG 1847
consensus_12601#1      CATGTGTGGGGCTCGG---AAAGTGGTGTGCCGTCGC-CAGAGCCAC-TCCAGAGAACTG 563
                       **        *** **   * *     *   * * *  ** ** *   * * *  *  **

consensus_12601#2      TGCTTGTGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACT-- 716
consensus_12601#3      TGCTTGTGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGACTCTGTGACTGTAAACT-- 335
consensus_12601#0      TGCTTGTGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACT-- 1905
consensus_12601#1      AGCC-ATTCCTTAGGGAGTGGATGAGCTGGTGGGCGTTGATGTCCAGGGCTGTTACCTGC 622
                        **   * ** *    *     * **    * *** *     **   * **** * **  

consensus_12601#2      -CA-GCCTGGGCAAGTCCTATACAGTCATTTTGTTTACTTAAAA----AAAAAGGGA--- 767
consensus_12601#3      -CA-GCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTG----GTAAGAGTTAGT 389
consensus_12601#0      -CA-GCCTTGTCAAGTCCTATACAGTCATTTTGTTTACTTTTTG----GTAAGAGTTAGT 1959
consensus_12601#1      CCACGACTTGCAGGACCCGCCGGGACCCTCTCGATTAAGGTAAACCCCGTGAAGGAAAGT 682
                        ** * ** *      **        * * * * ***              *  *     

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      GCTCTACTCGTTGTAGCGCAGGTCATATGCGAGTGTATAGAGGCGTGAGTGTAGTAACTG 449
consensus_12601#0      GCTCTACTCGTTGTAGCGCAGGTCATATGCGAGTGTATAGAGGCGTGAGTGTAGTAACTG 2019
consensus_12601#1      GCCTTAGACCTATTGANTCAG------TGGTACGGTCCATCNATTTGGTCGGATCGTGCC 736
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      TATGTAAGCTGGAGTGTGTTAGCAATATACGAGTAGATTAATGTGTTCTGCAAAGAGCAG 509
consensus_12601#0      TATGTAAGCTGGAGTGTGTTAGCAATATACGAGTAGATTAATGTGTTCTGCAAAGAGCAG 2079
consensus_12601#1      CCAACANGGTAGTCATCTCAAACGCGCTGCCCCCAACGCCATTTCGTTAACAAGGAACCG 796
                                                                                   

consensus_12601#2      ------------------------------------------------------------
consensus_12601#3      ATCATTGTGTGCTATTGCTGAACTAGCAAATGATATGGCCAACTTGTATTCATCGTGTGA 569
consensus_12601#0      ATCATTGTGTGCTATTGCTGAACTAGCCAATGATATGGCCAACTTGTATTAAAAAAAAAA 2139
consensus_12601#1      AGTTTCCAACGAAATCCTCTGGCTTCCNTTAAAC---CCCNGCCAGAGGTTGAACCGCAA 853
                                                                                   

consensus_12601#2      ----------------
consensus_12601#3      TTCTGATTGCTTGGCT 585
consensus_12601#0      AAAAAAAAAAAAAAAA 2155
consensus_12601#1      ATAAGAACGCACCT-- 867