cluster # 12602

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Oryza sativa
cluster # 12602 cluster # 12602 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12602#0 length = 2020 sequences # 7

consensus_12602#1 length = 1819 sequences # 4

consensusID : consensus_12602#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2020
fasta sequence

                              [GAGGGCCCTATGGGGGACTCGAGCGGGTCGGGTTCGGGTTCCGGGTCTGTGTCGGTGGACGTCGAGCGGATTTCCTTCGGCGGCAAGGAGCATCAAGTGAGGACGAGATGCGGTTCATTATCCGTCGCGATATACGGAGACGAGGACAAGCCGGCGCTCATCACGTACCCGGACATCGCGTTGAACCACATGTCCTGCTTCCAAGGATTGCTGTTTTGCCCCGAGGTGGCGTCGCTGCTGCTCCACAATTTCTGCATATACCACATAAATCCTCAGGGGCACGAGGTCTGTAGCCTGTGTGATATTGTTCAGACATGTCCACTGCCACTGCGTGATGCTTGAGTTTCTGTTGGTTGGGTTGCTCACATGATCATTCTCATGACATTTGTTAAGATTTCAATGCAGCTAGGAGCGGCTCCAATTCCATCCGATGTGCCGGTGCCATCTGTAGAGGATCTCGCCGATCAGGTTGCGGATGTGCTCGATTTCTTCGGATTAGGATCTGTGATGTGCCTGGGTGTTACAGCTGGTGCCTATGTCCTCACTCTGTTTGCAACGAAATACCGGGAGAGGGTAATAGGCTTGATGTTGGTTTCCCCTCTATGCAGAGCCCCATCATGGAGTGAATGGTTGTATAATAAGGTATTATTAAATTTGATCTACTATTACGGGACTCGAGGCTTGGTCAAGGAATGCTTGCTTCAGCGGTACTT-CAGCAAGAAAGTGTGTGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATTTGCTTGATGAGAGGCAGGGTGAAAATATCTGGCGGTTTCTTCACTCGATAAATGAGAGGCATGACTTAACAGATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTCCATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGAGGTTCAGGGTTGTGGCTCCCTTGTAACCGAGGAGCAGCCACATGCTATGCTGATGCCGATGGAGTACTTCCTCATGGGATACGGGCTTTACAGACCGTACCAGATGAACAGCAGCCCTCGCAGTCCGCTAAGTCCATGTTGTATATCACCGGAGTTGCTATCTCCTGAGAGCATGGGAGTGAAGCTGAAGCCGATCAAGACTCGAATAGCCGTGGATTACTAACGCAGGCAAGATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGCTCAGAGAACTGAAGATAGTCCTGGGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTGTTCATGTGTTTGAGTATGTACCCTGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCTTATAATCAGGAAAGTTCTACATCAGTAAGACAGAAAAGAGGGAAATCTGTAGTGGGGGATGTGTTCAGGGTGGTTCTTTGTTCAATTTGTTTTTGTAGTCAGCAGTCAGCAGCACAAAAATGTACATCTCGGAATAGTTTTGGGACAGATAAATAAGAATCAATCACCCCAGGTTTCAGATTTTTAACCA-TGGTATTACCAACAAAGTTTATTATATCCTGTCTGCTGCTCTGTCTTGTTGGGAGAAGGCTTGCAATTTCATTGCATGAACCCCTGGTTTTGAATGAGCTCCCCTCATACATACTTTCCAGATCATTAGTGCATCATATATGTCCATCTGGATGATCATTGGCCAGCAATGCAATGTCCCAGTTTCCAGTTCCACTTATTCACTGAAGAATAAAGCAGTGAAGGTCTTCTGCATTTGATGTTCCTGACCGTTTTTCTTGGCAGATTCAGCTATAGTTGGACCAGTACTCAGCTACAAGCTTACAGAAGGCAGAGTCCTCATTCTCCATCAGCCTTGATGGCCTATCATACTCTATGAGTTTCCCGTATGAAAGAACCATGACCATGTCACTGTCAGTGACAGTGGGAACCCTGTGAGCTATGGTGATCACAGTGCACCCTGAGAACTCCTGCTTGATGACTCTCTGCAGGACG]

[+] EMBL CB648629             [GAGGGCCCTATGGGGGACTCGAGCGGGTCGGGTTCGGGTTCCGGGTCTGTGTCGGTGGACGTCGAGCGGATTTCCTTCGGCGGCAAGGAGCATCAAGTGAGGACGAGATGCGGTTCATTATCCGTCGCGATATACGGAGACGAGGACAAGCCGGCGCTCATCACGTACCCGGACATCGCGTTGAACCACATGTCCTGCTTCCAAGGATTGCTGTTTTGCCCCGAGGTGGCGTCGCTGCTGCTCCACAATTTCTGCATATACCACATAAATCCTCAGGGGCACGAGGTCTGTAGCCTGTGTGATATTGTTCAGACATGTCCACTGCCACTGCGTGATGCTTGAGTTTCTGTTGGTTGGGTTGCTCACATGATCATTCTCATGACATTTGTTAAGATTTCAATGCAGCTAGGAGCGGCTCCAATTCCATCCGATGTGCCGGTGCCATCTGTAGAGGATCTCGCCGATCAGGTTGCGGATGTGCTCGATTTCTTCGGATTAGGATCTGTGATGTGCCTGGGTGTTACAGCTGGTGCCTATGTCCTCACTCTGTTTGCAACGAAATACCGGGAGAGGGTAATAGGCTTGATGTTGGTTTCCCCTCTATGCAGAGCCCCATCATGGAGTGAATGGTTGTATAATAAGGTATTATTAAATTTGATCTACTATTACGGGACTCGAGGCTTGGTCAAGGAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF324602             [                                                                                                                                                                                                                                                                                                                                                                                                                                            CGATGTGCCGGTGCCATCTGTAGAGGATCTCGCCGATCAGGTTGCGGATGTGCTCGATTTCTTCGGATTAGGATCTGTGATGTGCCTGGGTGTTACAGCTGGTGCCTATGTCCTCACTCTGTTTGCAACGAAATACCGGGAGAGGGTAATAGGCTTGATGTTGGTTTCCCCTCTATGCAGAGCCCCATCATGGAGTGAATGGTTGTATAATAAGGTATTATTAAATTTGATCTACTATTACGGGACTCGAGGCTTGGTCAAGGAATGCTTGCTTCAGCGGTACTT CAGCAAGAAAGTGTGTGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATTTGCTTGATGAGAGGCAGGGTGAAAATATCTGGCGGTTTCTTCACTCGATAAATGAGAGGCATGACTTAACAGATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTCCATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU098292             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ctTTCAGCGGTACTTNCAGCAAGAAAGTGTTTGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATTTGCTTGATGAGAGGCAGGGTGAAAATATCTGGCGGTTTCTTCACTCGATAAATGAGAGGCATGACTTAACAGATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTCCATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGAGGTTCAGGGTTGTGGCTCCCTTGTAACCGAGGAGCAGCCACATGCTATGCTGATGCCGATGGAGTACTTCCTCATGGGATACGGGCTTTACAGACCGTACCAGATGAACAGCAGCCCTCGCAGTCCGCTAAGTCCATGTTGTATATCACCGGAGTTGCTATCTCCTGAGAGCATGGGAGTGAAGCTGAAGCCGATCAAGACTCGAATAGCCGTGGATTACTAACGCAGGCAAGATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGCTCAGAGAACTGAAGATAGTCCTGGGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTGTTCATGTGTTTGAGTATGTACCCTGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCTTATAATCAGGAAAGTTCTACATCA  AAAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB648630             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGGCATGACTTAACAGATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTCCATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGAGGTTCAGGGTTGTGGCTCCCTTGTAACCGAGGAGCAGCCACATGCTATGCTGATGCCGATGGAGTACTTCCTCATGGGATACGGGCTTTACAGACCGTACCAGATGAACAGCAGCCCTCGCAGTCCGCTAAGTCCATGTTGTATATCACCGGAGTTGCTATCTCCTGAGAGCATGGGAGTGAAGCTGAAGCCGATCAAGACTCGAATAGCCGTGGATTACTAACGCAGGCAAGATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGCTCAGAGAACTGAAGATAGTCCTGGGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTGTTCATGTGTTTGAGTATGTACCCTGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCTTATAATCAGGAAAGTTCTACATCAGTAAGACAGAAAAGAGGGAAATCTGTAGTGGGGGATGTGTTCAGGGTGGTTCTTTGTTCAATTTGTTTTTGTAGTCAGCAGTCAGCAGCACAAAAATGTACATCTCGGAATAGTTTTGGGACAGATAGGTAAGAATCAATCACCCCAGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AA750680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGACTCGAATAGCCGTGGATTACTAACGCAGGCAAGATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGCTCAGAGAACTGAAGATAGTCCTGGGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTGTTCATGTGTTTGAGTATGTACCCTGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCTTATAATCAGGAAAGTTCTACATCAGTAAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB676045             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCGTTTGTTGGATATATAGCCTTATAATCAGGAAAGTTCTACATCAGTAAGACAGAAAAGAGGGAAATCTGTAGTGGGGGATGTGTTCAGGGTGGTTCTTTGTTCAATTTGTTTTTGTAGTCAGCAGTCAGCAGCACAAAAATGTACATCTCGGAATAGTTTTGGGACAGATAAATAAGAATCAATCACCCCAGGTTTCAGATTTTTAACCA TGGTATTACCAACAAAGTTTATTATATCCTGTCTGCTGCTCTGTCTTGTTGGGAGAAGGCTTGCAATTTCATTGCATGAACCCCTGGTTTTGAATGAGCTCCCCTCATACATACTTTCCAGATCATTAGTGCATCATATATGTCCATCTGGATGATCATTGGCCAGCAATGCAATGTCCCAGTTTCCAGTTCCACTTATTCACTGAAGAATAAAGCAGTGAAGGTCTTCTGCATTTGATGTTCCTGACCGTTTTTCTTGGCAGATTCAGCTATAGTTGGACCAGTACTCAGCTACAAGCTTACAGAAGGCAGAGTCCTCATTCTCCATCAGCCTTGATGGCCTATCATACTCTATGAGTTTCCCGTATGAAAGAACCATGACCATGTCACTGTCAGTGACAGTGGGAACCCTGTGAGCTATGGTGATCACAGTGCACCCTGAGAACTCCTGCTT                   ]
[-] EMBL BQ907419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTTTGGTTCAA TTG TTTTGTAGTCAGCAGTCAGCAGCACAAAAATGTACATCTCGGAATAG TTTGGGACAGATAAATAAGAATCAATCACCCCAGGTTTCAGATTTTTAACCAGTGGTATTACCAACAAAGTTTATTATATCCTGTCTGCTGCTCTGTC TG TGGGAGAAGGCTTGCAATTTCATTGCATGAACCCCTGGTTTTGAATGAGCTCCCCTCATACATACTTTCCAGATCATTAGTGCATCATATATGTCCATCTGGATGATCATGGGCCAGCAATGCAATGTCCCAGTTTCCAGTTCCACTTATTCACTGAAGAATAAAGCAGTGAAGGTCTTCTGCATTTGATGTTCCTGACCGTTTTTCTTGGCAGATTCAGCTATAGTTGGACCAGTACTCAGCTACAAGCTTACAGAAGGCAGAGTCCTCATTCTCCATCAGCCTTGATGGCCTATCATACTCTATGAGTTTCCCGTATGAAAGAACCATGACCATGTCACTGTCAGTGACAGTGGGAACCCTGTGAGCTATGGTGATCACAGTGCACCCTGAGAACTCCTGCTTGATGACTCTCTGCAGGACG]




>consensus_12602#0
GAGGGCCCTATGGGGGACTCGAGCGGGTCGGGTTCGGGTTCCGGGTCTGTGTCGGTGGAC
GTCGAGCGGATTTCCTTCGGCGGCAAGGAGCATCAAGTGAGGACGAGATGCGGTTCATTA
TCCGTCGCGATATACGGAGACGAGGACAAGCCGGCGCTCATCACGTACCCGGACATCGCG
TTGAACCACATGTCCTGCTTCCAAGGATTGCTGTTTTGCCCCGAGGTGGCGTCGCTGCTG
CTCCACAATTTCTGCATATACCACATAAATCCTCAGGGGCACGAGGTCTGTAGCCTGTGT
GATATTGTTCAGACATGTCCACTGCCACTGCGTGATGCTTGAGTTTCTGTTGGTTGGGTT
GCTCACATGATCATTCTCATGACATTTGTTAAGATTTCAATGCAGCTAGGAGCGGCTCCA
ATTCCATCCGATGTGCCGGTGCCATCTGTAGAGGATCTCGCCGATCAGGTTGCGGATGTG
CTCGATTTCTTCGGATTAGGATCTGTGATGTGCCTGGGTGTTACAGCTGGTGCCTATGTC
CTCACTCTGTTTGCAACGAAATACCGGGAGAGGGTAATAGGCTTGATGTTGGTTTCCCCT
CTATGCAGAGCCCCATCATGGAGTGAATGGTTGTATAATAAGGTATTATTAAATTTGATC
TACTATTACGGGACTCGAGGCTTGGTCAAGGAATGCTTGCTTCAGCGGTACTTCAGCAAG
AAAGTGTGTGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATTTG
CTTGATGAGAGGCAGGGTGAAAATATCTGGCGGTTTCTTCACTCGATAAATGAGAGGCAT
GACTTAACAGATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAAC
TCGCAATTCCATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCT
CTAGTTGAGGTTCAGGGTTGTGGCTCCCTTGTAACCGAGGAGCAGCCACATGCTATGCTG
ATGCCGATGGAGTACTTCCTCATGGGATACGGGCTTTACAGACCGTACCAGATGAACAGC
AGCCCTCGCAGTCCGCTAAGTCCATGTTGTATATCACCGGAGTTGCTATCTCCTGAGAGC
ATGGGAGTGAAGCTGAAGCCGATCAAGACTCGAATAGCCGTGGATTACTAACGCAGGCAA
GATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGCTCAGAGAACTGAAGATAGTCCTG
GGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTGTTCATGTGTTTGAGTATGTACCC
TGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCTTATAATCAGGAAAGTTCTACATC
AGTAAGACAGAAAAGAGGGAAATCTGTAGTGGGGGATGTGTTCAGGGTGGTTCTTTGTTC
AATTTGTTTTTGTAGTCAGCAGTCAGCAGCACAAAAATGTACATCTCGGAATAGTTTTGG
GACAGATAAATAAGAATCAATCACCCCAGGTTTCAGATTTTTAACCATGGTATTACCAAC
AAAGTTTATTATATCCTGTCTGCTGCTCTGTCTTGTTGGGAGAAGGCTTGCAATTTCATT
GCATGAACCCCTGGTTTTGAATGAGCTCCCCTCATACATACTTTCCAGATCATTAGTGCA
TCATATATGTCCATCTGGATGATCATTGGCCAGCAATGCAATGTCCCAGTTTCCAGTTCC
ACTTATTCACTGAAGAATAAAGCAGTGAAGGTCTTCTGCATTTGATGTTCCTGACCGTTT
TTCTTGGCAGATTCAGCTATAGTTGGACCAGTACTCAGCTACAAGCTTACAGAAGGCAGA
GTCCTCATTCTCCATCAGCCTTGATGGCCTATCATACTCTATGAGTTTCCCGTATGAAAG
AACCATGACCATGTCACTGTCAGTGACAGTGGGAACCCTGTGAGCTATGGTGATCACAGT
GCACCCTGAGAACTCCTGCTTGATGACTCTCTGCAGGACG

consensusID : consensus_12602#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1819
fasta sequence

                              [GAAGAGAAGAGGGAGGAGGGAGGGAGGGAGNCAATGGGGGACTCGAGCGGGTCGGGTTCGGGTTCCGGGTCTGTGTCGGTGGACGTCGAGCGGATTTCCTTCGGCGGCAAGGAGCATCAAGTGAGGACGAGATGCGGTTCATTATCCGTCGCGATATACGGAGACGAGGACAAGCCGGCGCTCATCACGTACCCGGACATCGCGTTGAACCACATGTCCTGCTTCCAAGGATTTGCTGTTTTGCCCCGAGGTGGCGTCGCTGCTGCTCCACAATTTTCTGCATATACCACATAAATCCTC-AGGGGCAC-GAGCTAGGAGCGGCTCCAATTCCATCCGATGTGCCGGTGCCATCTGTAGAGGATCTCGCCGATCAGGTTGCGGATGTGCTCGATTTCTTCGGATTAGGATCTGTGATGTGCCTGGGTGTTACAGCTGGTGCCTATGTCCTCACTCTGTTTGCAACGAAATACCGGGAGAGGGTAATAGGCTTGATGTTGGTTTCCCCTCTATGCANAGCCCCATCATGGAGTGAATGGTTGTATAATAAGGTATTATTAAATTTGATCTACTATTACGGGACTCGAGGCTTGGTCAAGGAATGCTTGCTTCAGC-GGTACTTCAAGAAGGTGACTTCAGAAGTCACTATTCTCAGCTTGTCTTCTTCCAATTTTATACATTATGGCTTTATTCACTGTCTTACTGATGCATTTTCTGCAGAAAGTGTGTGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATGTTAGTTCCTTATTGCCAAACCATGAAATTCCTTTATATCTTGTTGTTTCAAATCATAAACTGAAGGCGTTATTTATTTTTATTGTGCAGTTGCTTGATGAGAGGCAGGGTGAAAATATCTGGCGGTTTCTTCACTCGATAAATGAGTACGCGTTACCTCCTTTAATTTTGTTTCCTAGTCAATGGGAATACTTCATATCTTGGAGCTCATATAAACTACACTCCATCAGGAGGCATGACTTAACAGATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTCCATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGAGGTAACATATGGATCCAACCTGTGCCGTTAACAATCAAGACAAACTTGAAGAAAAAAAATTGTACTCAGGGTTGCTTCATGGGGTAATTGCAGGTTCAGGGTTGTGGCTCCCTTGTAACCGAGGAGCAGCCACATGCTATGCTGATGCCGATGGAGTACTTCCTCATGGGATACGGGCTTTACAGACCGTACCAGATGAACAGCAGCCCTCGCAGTCCGGTAAGTCCATGTTGTATATCACCGGAGTTGCTATCTCCTGAGAGCATGGGAGTGAAGCTGAAGCCGATCAAGACTCGAATAGCCGTGGATTACTAACGCAGGCAAGATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGCTCAGAGAACTGAAGATAGTCCTGGGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTGTTCATGTGTTTGAGTATGTACCCTGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCTTATAATCAGGAAAGTTTTACATCAGTAAGACAGAAAAGAGGGAAATCTGTAGTGGGGGATGTGTTCAGGGTGGTTCTTTGTTCAATTTGTTTTTGTAGTCAGCAGTCAGCAGCACAAAAATGTACATCTCGGAATAGTTTTGGGACAGATAAATAAGGGTCAATCACCCCAGGTTTCAGATTTTTAAAAAACAAAAAAG]

[+] EMBL OS0249A              [GAAGAGAAGAGGGAGGAGGGAGGGAGGGAGNCAATGGGGGACTCGAGCGGGTCGGGTTCGGGTTCCGGGTCTGTGTCGGTGGACGTCGAGCGGATTTCCTTCGGCGGCAAGGAGCATCAAGTGAGGACGAGATGCGGTTCATTATCCGTCGCGATATACGGAGACGAGGACAAGCCGGCGCTCATCACGTACCCGGACATCGCGTTGAACCACATGTCCTGCTTCCAAGGATTTGCTGTTTTGCCCCGAGGTGGCGTCGCTGCTGCTCCACAATTTTCTGCATATACCACATAAATCCTCAAGGGGCACGGAGCTAGGAGCGGCTCCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C26753               [                                                                                                                                                                                                                                                                                      TGCATATACCACATAAATCCTC AGGGGCAC GAGCTAGGAGCGGCTCCAATTCCATCCGATGTGCCGGTGCCATCTGTAGAGGATCTCGCCGATCAGGTTGCGGATGTGCTCGATTTCTTCGGATTAGGATCTGTGATGTGCCTGGGTGTTACAGCTGGTGCCTATGTCCTCACTCTGTTTGCAACGAAATACCGGGAGAGGGTAATAGGCTTGATGTTGGTTTCCCCTCTATGCANAGCCCCATCATGGAGTGAATGGTTGTATAATAAGGTATTATTAAATTTGATCTACTATTACGGGACTCGAGGCTTGGTCAAGGAATGCTTGCTTCAGCGGGTACTTCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB685590             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AATTCCTTCTACTATTACGGGACTCGAGGCTTGGTCAAGGAATGCTTGCTTCAGC GGTACTTCAGCAAGGTGACTTCAGAAGTCACTATTCTCAGCTTGTCTTCTTCCAATTTTATACATTATGGCTTTATTCACTGTCTTACTGATGCATTTTCTGCAGAAAGTGTGTGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATGTTAGTTCCTTATTGCCAAACCATGAAATTCCTTTATATCTTGTTGTTTCAAATCATAAACTGAAGGCGTTATTTATTTTTATTGTGCAGTTGCTTGATGAGAGGCAGGGTGAAAATATCTGGCGGTTTCTTCACTCGATAAATGAGTACGCGTTACCTCCTTTAATTTTGTTTCCTAGTCAATGGGAATACTTCATATCTTGGAGCTCATATAAACTACACTCCATCAGGAGGCATGACTTAACAGATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTCCATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGAGGTAACATATGGATCCAACCTGTGCCGTTAACAATCAAGACAAACTTGAAGAAAAAAAATTGTACTCAGGGTTGCTTCATGGGGTAATTGCAGGTTCAGGGTTGTGGCTCCCTTGTAACCGAGGAGCAGCCACATGCTATGCTGATGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB685591             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTGCTCTAGTTGAGGTAACATATGGATCCAACCTGTGCCGTTAACAATCAAGACAAACTTGAAGAAAAAAAATTGTACTCAGGGTTGCTTCATGGGGTAATTGCAGGTTCAGGGTTGTGGCTCCCTTGTAACCGAGGAGCAGCCACATGCTATGCTGATGCCGATGGAGTACTTCCTCATGGGATACGGGCTTTACAGACCGTACCAGATGAACAGCAGCCCTCGCAGTCCGGTAAGTCCATGTTGTATATCACCGGAGTTGCTATCTCCTGAGAGCATGGGAGTGAAGCTGAAGCCGATCAAGACTCGAATAGCCGTGGATTACTAACGCAGGCAAGATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGCTCAGAGAACTGAAGATAGTCCTGGGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTGTTCATGTGTTTGAGTATGTACCCTGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCTTATAATCAGGAAAGTTTTACATCAGTAAGACAGAAAAGAGGGAAATCTGTAGTGGGGGATGTGTTCAGGGTGGTTCTTTGTTCAATTTGTTTTTGTAGTCAGCAGTCAGCAGCACAAAAATGTACATCTCGGAATAGTTTTGGGACAGATAAATAAGGGTCAATCACCCCAGGTTTCAGATTTTTAAAAAACAAAAAAG]




>consensus_12602#1
GAAGAGAAGAGGGAGGAGGGAGGGAGGGAGNCAATGGGGGACTCGAGCGGGTCGGGTTCG
GGTTCCGGGTCTGTGTCGGTGGACGTCGAGCGGATTTCCTTCGGCGGCAAGGAGCATCAA
GTGAGGACGAGATGCGGTTCATTATCCGTCGCGATATACGGAGACGAGGACAAGCCGGCG
CTCATCACGTACCCGGACATCGCGTTGAACCACATGTCCTGCTTCCAAGGATTTGCTGTT
TTGCCCCGAGGTGGCGTCGCTGCTGCTCCACAATTTTCTGCATATACCACATAAATCCTC
AGGGGCACGAGCTAGGAGCGGCTCCAATTCCATCCGATGTGCCGGTGCCATCTGTAGAGG
ATCTCGCCGATCAGGTTGCGGATGTGCTCGATTTCTTCGGATTAGGATCTGTGATGTGCC
TGGGTGTTACAGCTGGTGCCTATGTCCTCACTCTGTTTGCAACGAAATACCGGGAGAGGG
TAATAGGCTTGATGTTGGTTTCCCCTCTATGCANAGCCCCATCATGGAGTGAATGGTTGT
ATAATAAGGTATTATTAAATTTGATCTACTATTACGGGACTCGAGGCTTGGTCAAGGAAT
GCTTGCTTCAGCGGTACTTCAAGAAGGTGACTTCAGAAGTCACTATTCTCAGCTTGTCTT
CTTCCAATTTTATACATTATGGCTTTATTCACTGTCTTACTGATGCATTTTCTGCAGAAA
GTGTGTGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATGTTAGT
TCCTTATTGCCAAACCATGAAATTCCTTTATATCTTGTTGTTTCAAATCATAAACTGAAG
GCGTTATTTATTTTTATTGTGCAGTTGCTTGATGAGAGGCAGGGTGAAAATATCTGGCGG
TTTCTTCACTCGATAAATGAGTACGCGTTACCTCCTTTAATTTTGTTTCCTAGTCAATGG
GAATACTTCATATCTTGGAGCTCATATAAACTACACTCCATCAGGAGGCATGACTTAACA
GATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTC
CATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGAG
GTAACATATGGATCCAACCTGTGCCGTTAACAATCAAGACAAACTTGAAGAAAAAAAATT
GTACTCAGGGTTGCTTCATGGGGTAATTGCAGGTTCAGGGTTGTGGCTCCCTTGTAACCG
AGGAGCAGCCACATGCTATGCTGATGCCGATGGAGTACTTCCTCATGGGATACGGGCTTT
ACAGACCGTACCAGATGAACAGCAGCCCTCGCAGTCCGGTAAGTCCATGTTGTATATCAC
CGGAGTTGCTATCTCCTGAGAGCATGGGAGTGAAGCTGAAGCCGATCAAGACTCGAATAG
CCGTGGATTACTAACGCAGGCAAGATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGC
TCAGAGAACTGAAGATAGTCCTGGGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTG
TTCATGTGTTTGAGTATGTACCCTGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCT
TATAATCAGGAAAGTTTTACATCAGTAAGACAGAAAAGAGGGAAATCTGTAGTGGGGGAT
GTGTTCAGGGTGGTTCTTTGTTCAATTTGTTTTTGTAGTCAGCAGTCAGCAGCACAAAAA
TGTACATCTCGGAATAGTTTTGGGACAGATAAATAAGGGTCAATCACCCCAGGTTTCAGA
TTTTTAAAAAACAAAAAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12602#0      ------------------------GAGGGCCCTATGGGGGACTCGAGCGGGTCGGGTTCG 36
consensus_12602#1      GAAGAGAAGAGGGAGGAGGGAGGGAGGGAGNCAATGGGGGACTCGAGCGGGTCGGGTTCG 60
                                                 **   * ***************************

consensus_12602#0      GGTTCCGGGTCTGTGTCGGTGGACGTCGAGCGGATTTCCTTCGGCGGCAAGGAGCATCAA 96
consensus_12602#1      GGTTCCGGGTCTGTGTCGGTGGACGTCGAGCGGATTTCCTTCGGCGGCAAGGAGCATCAA 120
                       ************************************************************

consensus_12602#0      GTGAGGACGAGATGCGGTTCATTATCCGTCGCGATATACGGAGACGAGGACAAGCCGGCG 156
consensus_12602#1      GTGAGGACGAGATGCGGTTCATTATCCGTCGCGATATACGGAGACGAGGACAAGCCGGCG 180
                       ************************************************************

consensus_12602#0      CTCATCACGTACCCGGACATCGCGTTGAACCACATGTCCTGCTTCCAAGGATT-GCTGTT 215
consensus_12602#1      CTCATCACGTACCCGGACATCGCGTTGAACCACATGTCCTGCTTCCAAGGATTTGCTGTT 240
                       ***************************************************** ******

consensus_12602#0      TTGCCCCGAGGTGGCGTCGCTGCTGCTCCACAATTT-CTGCATATACCACATAAATCCTC 274
consensus_12602#1      TTGCCCCGAGGTGGCGTCGCTGCTGCTCCACAATTTTCTGCATATACCACATAAATCCTC 300
                       ************************************ ***********************

consensus_12602#0      AGGGGCACGAGGTCTGTAGCCTGTGTGATATTGTTCAGACATGTCCACTGCCACTGCGTG 334
consensus_12602#1      AGGGGCACGAG------------------------------------------------- 311
                       ***********                                                 

consensus_12602#0      ATGCTTGAGTTTCTGTTGGTTGGGTTGCTCACATGATCATTCTCATGACATTTGTTAAGA 394
consensus_12602#1      ------------------------------------------------------------
                                                                                   

consensus_12602#0      TTTCAATGCAGCTAGGAGCGGCTCCAATTCCATCCGATGTGCCGGTGCCATCTGTAGAGG 454
consensus_12602#1      -----------CTAGGAGCGGCTCCAATTCCATCCGATGTGCCGGTGCCATCTGTAGAGG 360
                                  *************************************************

consensus_12602#0      ATCTCGCCGATCAGGTTGCGGATGTGCTCGATTTCTTCGGATTAGGATCTGTGATGTGCC 514
consensus_12602#1      ATCTCGCCGATCAGGTTGCGGATGTGCTCGATTTCTTCGGATTAGGATCTGTGATGTGCC 420
                       ************************************************************

consensus_12602#0      TGGGTGTTACAGCTGGTGCCTATGTCCTCACTCTGTTTGCAACGAAATACCGGGAGAGGG 574
consensus_12602#1      TGGGTGTTACAGCTGGTGCCTATGTCCTCACTCTGTTTGCAACGAAATACCGGGAGAGGG 480
                       ************************************************************

consensus_12602#0      TAATAGGCTTGATGTTGGTTTCCCCTCTATGCAGAGCCCCATCATGGAGTGAATGGTTGT 634
consensus_12602#1      TAATAGGCTTGATGTTGGTTTCCCCTCTATGCANAGCCCCATCATGGAGTGAATGGTTGT 540
                       ********************************* **************************

consensus_12602#0      ATAATAAGGTATTATTAAATTTGATCTACTATTACGGGACTCGAGGCTTGGTCAAGGAAT 694
consensus_12602#1      ATAATAAGGTATTATTAAATTTGATCTACTATTACGGGACTCGAGGCTTGGTCAAGGAAT 600
                       ************************************************************

consensus_12602#0      GCTTGCTTCAGCGGTACTTCAGCAAG---------------------------------- 720
consensus_12602#1      GCTTGCTTCAGCGGTACTTCAAGAAGGTGACTTCAGAAGTCACTATTCTCAGCTTGTCTT 660
                       *********************  ***                                  

consensus_12602#0      ---------------------------------------------------------AAA 723
consensus_12602#1      CTTCCAATTTTATACATTATGGCTTTATTCACTGTCTTACTGATGCATTTTCTGCAGAAA 720
                                                                                ***

consensus_12602#0      GTGTGTGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAAT------ 777
consensus_12602#1      GTGTGTGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATGTTAGT 780
                       ******************************************************      

consensus_12602#0      ------------------------------------------------------------
consensus_12602#1      TCCTTATTGCCAAACCATGAAATTCCTTTATATCTTGTTGTTTCAAATCATAAACTGAAG 840
                                                                                   

consensus_12602#0      ------------------------TTGCTTGATGAGAGGCAGGGTGAAAATATCTGGCGG 813
consensus_12602#1      GCGTTATTTATTTTTATTGTGCAGTTGCTTGATGAGAGGCAGGGTGAAAATATCTGGCGG 900
                                               ************************************

consensus_12602#0      TTTCTTCACTCGATAAATGAG--------------------------------------- 834
consensus_12602#1      TTTCTTCACTCGATAAATGAGTACGCGTTACCTCCTTTAATTTTGTTTCCTAGTCAATGG 960
                       *********************                                       

consensus_12602#0      ---------------------------------------------AGGCATGACTTAACA 849
consensus_12602#1      GAATACTTCATATCTTGGAGCTCATATAAACTACACTCCATCAGGAGGCATGACTTAACA 1020
                                                                    ***************

consensus_12602#0      GATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTC 909
consensus_12602#1      GATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTC 1080
                       ************************************************************

consensus_12602#0      CATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGAG 969
consensus_12602#1      CATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGAG 1140
                       ************************************************************

consensus_12602#0      GT---------------------------------------------------------- 971
consensus_12602#1      GTAACATATGGATCCAACCTGTGCCGTTAACAATCAAGACAAACTTGAAGAAAAAAAATT 1200
                       **                                                          

consensus_12602#0      ----------------------------------TCAGGGTTGTGGCTCCCTTGTAACCG 997
consensus_12602#1      GTACTCAGGGTTGCTTCATGGGGTAATTGCAGGTTCAGGGTTGTGGCTCCCTTGTAACCG 1260
                                                         **************************

consensus_12602#0      AGGAGCAGCCACATGCTATGCTGATGCCGATGGAGTACTTCCTCATGGGATACGGGCTTT 1057
consensus_12602#1      AGGAGCAGCCACATGCTATGCTGATGCCGATGGAGTACTTCCTCATGGGATACGGGCTTT 1320
                       ************************************************************

consensus_12602#0      ACAGACCGTACCAGATGAACAGCAGCCCTCGCAGTCCGCTAAGTCCATGTTGTATATCAC 1117
consensus_12602#1      ACAGACCGTACCAGATGAACAGCAGCCCTCGCAGTCCGGTAAGTCCATGTTGTATATCAC 1380
                       ************************************** *********************

consensus_12602#0      CGGAGTTGCTATCTCCTGAGAGCATGGGAGTGAAGCTGAAGCCGATCAAGACTCGAATAG 1177
consensus_12602#1      CGGAGTTGCTATCTCCTGAGAGCATGGGAGTGAAGCTGAAGCCGATCAAGACTCGAATAG 1440
                       ************************************************************

consensus_12602#0      CCGTGGATTACTAACGCAGGCAAGATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGC 1237
consensus_12602#1      CCGTGGATTACTAACGCAGGCAAGATTTCAGCAATCAGAATGAACTGCTTTGCTTACAGC 1500
                       ************************************************************

consensus_12602#0      TCAGAGAACTGAAGATAGTCCTGGGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTG 1297
consensus_12602#1      TCAGAGAACTGAAGATAGTCCTGGGCTGGTTGAAATGTTACCGTAGAGACGCAAAGTTTG 1560
                       ************************************************************

consensus_12602#0      TTCATGTGTTTGAGTATGTACCCTGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCT 1357
consensus_12602#1      TTCATGTGTTTGAGTATGTACCCTGGCAAAAAAAGCCTCCTTTTGTTGTATATATAGCCT 1620
                       ************************************************************

consensus_12602#0      TATAATCAGGAAAGTTCTACATCAGTAAGACAGAAAAGAGGGAAATCTGTAGTGGGGGAT 1417
consensus_12602#1      TATAATCAGGAAAGTTTTACATCAGTAAGACAGAAAAGAGGGAAATCTGTAGTGGGGGAT 1680
                       **************** *******************************************

consensus_12602#0      GTGTTCAGGGTGGTTCTTTGTTCAATTTGTTTTTGTAGTCAGCAGTCAGCAGCACAAAAA 1477
consensus_12602#1      GTGTTCAGGGTGGTTCTTTGTTCAATTTGTTTTTGTAGTCAGCAGTCAGCAGCACAAAAA 1740
                       ************************************************************

consensus_12602#0      TGTACATCTCGGAATAGTTTTGGGACAGATAAATAAGAATCAATCACCCCAGGTTTCAGA 1537
consensus_12602#1      TGTACATCTCGGAATAGTTTTGGGACAGATAAATAAGGGTCAATCACCCCAGGTTTCAGA 1800
                       *************************************  *********************

consensus_12602#0      TTTTTAACCATGGTATTACCAACAAAGTTTATTATATCCTGTCTGCTGCTCTGTCTTGTT 1597
consensus_12602#1      TTTTTAAAA--------AACAAAAAAG--------------------------------- 1819
                       *******          * *** ****                                 

consensus_12602#0      GGGAGAAGGCTTGCAATTTCATTGCATGAACCCCTGGTTTTGAATGAGCTCCCCTCATAC 1657
consensus_12602#1      ------------------------------------------------------------
                                                                                   

consensus_12602#0      ATACTTTCCAGATCATTAGTGCATCATATATGTCCATCTGGATGATCATTGGCCAGCAAT 1717
consensus_12602#1      ------------------------------------------------------------
                                                                                   

consensus_12602#0      GCAATGTCCCAGTTTCCAGTTCCACTTATTCACTGAAGAATAAAGCAGTGAAGGTCTTCT 1777
consensus_12602#1      ------------------------------------------------------------
                                                                                   

consensus_12602#0      GCATTTGATGTTCCTGACCGTTTTTCTTGGCAGATTCAGCTATAGTTGGACCAGTACTCA 1837
consensus_12602#1      ------------------------------------------------------------
                                                                                   

consensus_12602#0      GCTACAAGCTTACAGAAGGCAGAGTCCTCATTCTCCATCAGCCTTGATGGCCTATCATAC 1897
consensus_12602#1      ------------------------------------------------------------
                                                                                   

consensus_12602#0      TCTATGAGTTTCCCGTATGAAAGAACCATGACCATGTCACTGTCAGTGACAGTGGGAACC 1957
consensus_12602#1      ------------------------------------------------------------
                                                                                   

consensus_12602#0      CTGTGAGCTATGGTGATCACAGTGCACCCTGAGAACTCCTGCTTGATGACTCTCTGCAGG 2017
consensus_12602#1      ------------------------------------------------------------
                                                                                   

consensus_12602#0      ACG 2020
consensus_12602#1      ---