cluster # 12624

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Oryza sativa
cluster # 12624 cluster # 12624 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12624#0 length = 1966 sequences # 7

consensus_12624#1 length = 1485 sequences # 3
consensus_12624#2 length = 515 sequences # 1

consensusID : consensus_12624#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1966
fasta sequence

                              [GGTTCTGAAGCACTTAAGTGGGCTATGGAGTGCACATCTCGTCACTTGGCATGTCGGTCACACCAGATATATCGTGCTTTACGCCCCAGTGTTAAAAGCGATAGCTGTGTATTGCTTATGAGGTGCATCCACAGATGCTTGGGTAACCCTGTTCCAGCTGTTCTGGGTTTTGCAATGGAGATATTGTTGACTCTTCAAGTCATGGTTGAGAACATGGAACCTGAGAAGGTGATACTTTACCCACAGCTCTTCTGGGGCTGTGTTGCACTGATGCATACCGATTATGTGCACATATATTGCCAGGTGCTTGAATTGTTCTGTAGGGTAATCGATCGCTTGACGTTCCGTGATCGGACAACTGAAAATGTGTTACTGTCCAGCATGCCACGTGATGAGTTTGACATCAATGGGTATACAAGCGACCTCCACAGGCTGGAATCGAGAACCACGTCAGAGAGATTGCTATCCGTGACAGAGACTGGGAAAGTTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGTGTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCTATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTTGGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAGAATCAGAAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTAGATGATTTAGCGGAAGTCTTCAGAGCATACTCCTTTGGAGAAATCATCTCCCTAGAAGATCTTTTTGCACGCGCTTCGCCGCCAATATGTTCCGAGTGGTTCCCTAAGCACTCATCTCTGGCATTTGGGCACCTGCTTAGGCTCCTTGAGAGAGGTCCTCTGGATTATCAGAGAGTGGTGCTTCTGATGCTTAAATCACTGTTGCAGCAAAGCCCAGTGGATCCATCTCAGATACCTCAAGTGTACAATGTTGTGTCACAGCTCGTGGAGAGCGCACTATGTGCAGAGGCATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAGGTGATGATATTGGATTTGGCGAGAATGGTCACGGGATGGGGGAGAAGGTTCACCAAAGCATGCTTCTTCCTCAATCATCATTCAAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCGGTTCAGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGGCCACCCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCT--CAGAGGTCGCAGGTTTGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGAGCGAGTGGCACAAGCTCTTTTCTTTTCTTTTTTTTCTTGGCTAGTGTGTATATTGGAATTGCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTGATTCATTATTATTGTTACCTGTTGTGTTCATTTATGCACGGAGACGATGTAATCTGTTTGATGTCGCTACCGTAGAGTCGAAACATCTCTCGAACAATCTAATTCACCATTCATCGTGAGAAGCTGTTATT]

[+] EMBL CB676029             [GGTTCTGAAGCACTTAAGTGGGCTATGGAGTGCACATCTCGTCACTTGGCATGTCGGTCACACCAGATATATCGTGCTTTACGCCCCAGTGTTAAAAGCGATAGCTGTGTATTGCTTATGAGGTGCATCCACAGATGCTTGGGTAACCCTGTTCCAGCTGTTCTGGGTTTTGCAATGGAGATATTGTTGACTCTTCAAGTCATGGTTGAGAACATGGAACCTGAGAAGGTGATACTTTACCCACAGCTCTTCTGGGGCTGTGTTGCACTGATGCATACCGATTATGTGCACATATATTGCCAGGTGCTTGAATTGTTCTGTAGGGTAATCGATCGCTTGACGTTCCGTGATCGGACAACTGAAAATGTGTTACTGTCCAGCATGCCACGTGATGAGTTTGACATCAATGGGTATACAAGCGACCTCCACAGGCTGGAATCGAGAACCACGTCAGAGAGATTGCTATCCGTGACAGAGACTGGGAAAGTTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGTGTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCTATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTTGGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAGAATCAGAAAGCTTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK060482             [                                                                                                                                                                                                                                                                                                                 GCTTGAATTGTTCTGTAGGGTAATCGATCGCTTGACGTTCCGTGATCGGACAACTGAAAATGTGTTACTGTCCAGCATGCCACGTGATGAGTTTGACATCAATGGGTATACAAGCGACCTCCACAGGCTGGAATCGAGAACCACGTCAGAGAGATTGCTATCCGTGACAGAGACTGGGAAAGTTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGTGTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCTATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTTGGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAGAATCAGAAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTAGATGATTTAGCGGAAGTCTTCAGAGCATACTCCTTTGGAGAAATCATCTCCCTAGAAGATCTTTTTGCACGCGCTTCGCCGCCAATATGTTCCGAGTGGTTCCCTAAGCACTCATCTCTGGCATTTGGGCACCTGCTTAGGCTCCTTGAGAGAGGTCCTCTGGATTATCAGAGAGTGGTGCTTCTGATGCTTAAATCACTGTTGCAGCAAAGCCCAGTGGATCCATCTCAGATACCTCAAGTGTACAATGTTGTGTCACAGCTCGTGGAGAGCGCACTATGTGCAGAGGCATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAGGTGATGATATTGGATTTGGCGAGAATGGTCACGGGATGGGGGAGAAGGTTCACCAAAGCATGCTTCTTCCTCAATCATCATTCAAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCGGTTCAGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGGCCACCCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCTCACAGAGGTCGCAGGTTTGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGAGCGAGTGGCACAAGCTCTTTTCTTTTC TTTTTTTCTTGGCTAGTGTGTATATTGGAATTGCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTGATTCATTATTATTGTTACCTGTTGTGTTCATTTATGCACGGAGACGATGTAATCTGTTTGATGTCGCTACCGTAGAGTCGAAACATCTCTCGAACAATCTAATTCACC                       ]
[-] EMBL CB633752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAGGTGATGATATTGGATTTGGCGAGAATGGTCACGGGATGGGGGAGAAGGTTCACCAAAGCATGCTTCTTCCTCAATCATCATTCAAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCGGTTCAGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGGCCACCCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCT  CAGAGGTCGCAGGTTTGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGAGCGAGTGGCACAAGCTCTTTTCTTTTCTTTTTTTTCTTGGCTAGTGTGTATATTGGAATTGCTTGGTGACATCCCGAAGGGGAGAGGACTCCAGTGTAGTGTTT                                                                                                                                    ]
[-] EMBL CB676030             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCAAGGTGATGATATTGGATTTGGCGAGAATGGTCACGGGATGGGGGAGAAGGTTCACCAAAGCATGCTTCTTCCTCAATCATCATTCAAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCGGTTCAGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGGCCACCCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCTCACAGAGGTCGCAGGTTTGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGAGCGAGTGGCACAAGCTCTTTTCTTTTC TTTTTTTCTTGGCTAGTGTGTATATTGGAATTGCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGGGGGATTCATTATTATTGTTACC                                                                                                                ]
[-] EMBL CB628403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCGAGAATGGTCACGGGATGGGGGAGAAGGTTCACCAAAGCATGCTTCTTCCTCAATCATCATTCAAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCGGTTCAGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGGCCACCCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCACCCT  CAGAGGTCGCAGGTTTGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGAGCGAGTGGCACAAGCTCTTTTCTTTTCTTTTTTTTGTGGGCTAGTGTGTATATTGGAATTGCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTGATTCGTTATTATTGTTCCCTGTTGTGTT                                                                                                       ]
[+] EMBL CA767400             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGCAGCGCTGCAGATACTGGAGTGGCCACCCGAGACGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCT  CAGAGGTCGCAGGTTTGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGAGCGAGTGGCACAAGCTCTTTTCTTTTCTTTTTTTTCTTGGCTAGTGTGTATATTGGAATTGCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTGATTCATTATTATTGTTACCTGTTGTGTTCATT                                                                                                   ]
[+] EMBL CA766871             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCAGTGTAGTGTTTGATTCATTATTATTGTTACCTGTTGTGTTCATTTATGCACGGAGACGATGTAATCTGTTTGATGTCGCTACCGTAGAGTCGAAACATCTCTCGAACAATCTAATTCACCATTCATCGTGAGAAGCTGTTATT]




>consensus_12624#0
GGTTCTGAAGCACTTAAGTGGGCTATGGAGTGCACATCTCGTCACTTGGCATGTCGGTCA
CACCAGATATATCGTGCTTTACGCCCCAGTGTTAAAAGCGATAGCTGTGTATTGCTTATG
AGGTGCATCCACAGATGCTTGGGTAACCCTGTTCCAGCTGTTCTGGGTTTTGCAATGGAG
ATATTGTTGACTCTTCAAGTCATGGTTGAGAACATGGAACCTGAGAAGGTGATACTTTAC
CCACAGCTCTTCTGGGGCTGTGTTGCACTGATGCATACCGATTATGTGCACATATATTGC
CAGGTGCTTGAATTGTTCTGTAGGGTAATCGATCGCTTGACGTTCCGTGATCGGACAACT
GAAAATGTGTTACTGTCCAGCATGCCACGTGATGAGTTTGACATCAATGGGTATACAAGC
GACCTCCACAGGCTGGAATCGAGAACCACGTCAGAGAGATTGCTATCCGTGACAGAGACT
GGGAAAGTTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGT
GTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCT
ATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTT
GGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAG
AATCAGAAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTA
GATGATTTAGCGGAAGTCTTCAGAGCATACTCCTTTGGAGAAATCATCTCCCTAGAAGAT
CTTTTTGCACGCGCTTCGCCGCCAATATGTTCCGAGTGGTTCCCTAAGCACTCATCTCTG
GCATTTGGGCACCTGCTTAGGCTCCTTGAGAGAGGTCCTCTGGATTATCAGAGAGTGGTG
CTTCTGATGCTTAAATCACTGTTGCAGCAAAGCCCAGTGGATCCATCTCAGATACCTCAA
GTGTACAATGTTGTGTCACAGCTCGTGGAGAGCGCACTATGTGCAGAGGCATTGAATGTG
TTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAGGTGATGATATTGGA
TTTGGCGAGAATGGTCACGGGATGGGGGAGAAGGTTCACCAAAGCATGCTTCTTCCTCAA
TCATCATTCAAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCGGTTCAGGGTTTGGG
ACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGGCCACCCGAGATGTG
GCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGCTCTTGGGCGT
AAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAAAATGCAGTTG
AGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATGAATGCAGCCA
ATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGACAAGATAGAAG
AAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTGACTGTTGTAA
TATCGGAATGTGTTTATTTATCCTGCAACCTCAGAGGTCGCAGGTTTGAAGTATGGTTGT
AGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGAGCGAGTGGCA
CAAGCTCTTTTCTTTTCTTTTTTTTCTTGGCTAGTGTGTATATTGGAATTGCTTGGTGAC
ATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTGATTCATTATTATTGTTACCTGTTGT
GTTCATTTATGCACGGAGACGATGTAATCTGTTTGATGTCGCTACCGTAGAGTCGAAACA
TCTCTCGAACAATCTAATTCACCATTCATCGTGAGAAGCTGTTATT

consensusID : consensus_12624#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1485
fasta sequence

                              [GTATCTTTGAGACCTCCACAGGCTGGAATCGAG-AACCACGTCAGAGAGATTGCTATCCGTGACAGAGACTGGGAAAGCTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGTGTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCTATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTTGGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAAAATCAGAAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTAGATGATTTAGCGGAAGTCTTCAGAGCATACTCCTTTGGAGAAATCATCTCCCTAGAAGATCTTTTTGCACGCGCTTCGCCGCCAATATGTTCCGAGTGGTTCCCTAAGCACTCATCTCTGGCATTTGGGCACCTGCTTAGGCTCCTTGAGAGAGGTCCTCTGGATTATCAGAGAGTGGTGCTTCTGATGCTTAAATCACTGTTGCAGCAAACCCCAGTGGATCCATCTCAGATACCTCAAGTGTACAATGTTGTGTCACAGCTCGTGGAGAGCGCACTATGTGCAGAGGCATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAGGTGATGATATTGGATTTGGCGAGAATGGTCACGGGAT-GGGGGAGAAGGTTCACCAAAGCATGCTTCTTCCTCAATCATCATTCGAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCGGTTCAGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGGCCACCCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCTCAGAGGTCGCAGGTTTGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGAGCGAGTGGCACAAGCTCTTTTCTTTTCTTTTTTTGGTTGGCTAGTGTGTATATTGGAATTGCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTAAATGATTATTATTGTTACCTGTTGTGTTCAAAAAAAACTTAAAGGAAAAAAAACTCGAGG]

[+] EMBL CB633751             [GTATCTTTGAGACCTCCACAGGCTGGAATCGAG AACCACGTCAGAGAGATTGCTATCCGTGACAGAGACTGGGAAAGCTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGTGTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCTATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTTGGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAAAATCAGAAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTAGATGATTTAGCGGAAGTCTTCAGAGCATACTCCTTTGGAGAAATCATCTCCCTAGAAGATCTTTTTGCACGCGCTTCGCCGCCAATATGTTCCGAGTGGTTCCCTAAGCACTCATCTCTGGCATTTGGGCACCTGCTTAGGCTCCTTGAGAGAGGTCCTCTGGATTATCAGAGAGTGGTGCTTCTGATGCTTAAATCACTGTTGCAGCAAACCCCAGTGGATCCATCTCAGATACCTCAAGTGTACAATGTTGTGTCACAGCTCGTGGAGAGCGCACTATGTGCAGAGGCATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAGGTGATGATATTGGATTTGGCGAGAATGGTCACGGGATGGGGGGAGAAGGTTCACCAAAGCATGCTTCTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB633802             [                      CTGGAGTCGAGCAACCACCTCGGAGACATGGGTGGCGGGGACGAAGACTGGGAAAGTTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCTTATGTCTACTGTTAGCCATGGATCTGCAATTGAGGTGTTATCTACGATTACCATCCCATCATGTGATTCTATATTTGGGAGTCCTGATACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTTGGGTTGCATCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAAAATCAGAAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTAGATGATTTAACGGAAGTCTTCAGAGCATACTCCTTTGGAGAAATCATCTCCCTAGAAGATCTTTTTGCACGCGCTTCGCCGCCAATATGTTCCGAGTGGTTCCCTAAGCACTCATCTCTGGCATTTGGGCACCTGCTTAGGCTCCTTGAGAGAGGTCCTCTGGATTATCAGAGAGTGGTGCTTCTGATGCTTAAATCACTGTTGCAGCAAACCCCAGTGGATCCATCTCACATACCTCAAGTGTACAATGTTGTGTCACAGCTCGTGGAGAGCGCACTATGTGCACAGGCATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAGGTGATGATATTGGATTTGGCGAGAATGGTCACGGGAT GGGGGAGAAAGTTCACCAAAGCATGCTTCTTCCTCAATCATCATTCGAGGCTAGGAGTGGACCTCTTCAATATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB635121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAGGTGATGATATTGGATTTGGCGAGAATGGTCACGGGAT GGGGGAGAAGGTTCACCAAAGCATGCTTCTTCCTCAATCATCATTCAAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCGGTTCAGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGGCCACCCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCTCAGAGGTCGCAGGTTTGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGAGCGAGTGGCACAAGCTCTTTTCTTTTCTTTTTTTGGTTGGCTAGTGTGTATATTGGAATTGCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTAAATGATTATTATTGTTACCTGTTGTGTTCAAAAAAAACTTAAAGGAAAAAAAACTCGAGG]




>consensus_12624#1
GTATCTTTGAGACCTCCACAGGCTGGAATCGAGAACCACGTCAGAGAGATTGCTATCCGT
GACAGAGACTGGGAAAGCTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCT
TATGTCTAGTGTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAAC
ATGTGATTCTATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCT
TCCATGGCTTGGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTAT
ACAAGAGCAAAATCAGAAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGT
CAAATCTTTAGATGATTTAGCGGAAGTCTTCAGAGCATACTCCTTTGGAGAAATCATCTC
CCTAGAAGATCTTTTTGCACGCGCTTCGCCGCCAATATGTTCCGAGTGGTTCCCTAAGCA
CTCATCTCTGGCATTTGGGCACCTGCTTAGGCTCCTTGAGAGAGGTCCTCTGGATTATCA
GAGAGTGGTGCTTCTGATGCTTAAATCACTGTTGCAGCAAACCCCAGTGGATCCATCTCA
GATACCTCAAGTGTACAATGTTGTGTCACAGCTCGTGGAGAGCGCACTATGTGCAGAGGC
ATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAGGTGA
TGATATTGGATTTGGCGAGAATGGTCACGGGATGGGGGAGAAGGTTCACCAAAGCATGCT
TCTTCCTCAATCATCATTCGAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCGGTTC
AGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGGCCAC
CCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACATGCGC
TCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGTAGAA
AATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATGAATG
AATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGTTGAC
AAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAATTTTG
ACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCTCAGAGGTCGCAGGTTTGAA
GTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGCATGA
GCGAGTGGCACAAGCTCTTTTCTTTTCTTTTTTTGGTTGGCTAGTGTGTATATTGGAATT
GCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTAAATGATTATTATTGT
TACCTGTTGTGTTCAAAAAAAACTTAAAGGAAAAAAAACTCGAGG

consensusID : consensus_12624#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 515
fasta sequence

                              [TGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGTGTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCTATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTTGGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAGGATCAGNAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTAGATGATTTAGCGGAAGTCTTCAGAGCATAACTCCTTTGGAGAAAATCATCTCCCCTAGAAAGATCTTTTGCACGGNGCTTCGCCGCCAATATTGTTCCGNAGTNGTTCCCAAANGACTTCAACCTCTTGGAATTTTNGGGACCTTCTTTAGGNCTCCCTTGAGANAAGGCCNCTTGGTTTATNANAANGTNGGGGTTCNAANTNNTTAAACACTTTTAAGNAACCCCATNGGNNCCACTN]

[+] EMBL D42960               [TGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGTGTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCTATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTTGGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAGGATCAGNAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTAGATGATTTAGCGGAAGTCTTCAGAGCATAACTCCTTTGGAGAAAATCATCTCCCCTAGAAAGATCTTTTGCACGGNGCTTCGCCGCCAATATTGTTCCGNAGTNGTTCCCAAANGACTTCAACCTCTTGGAATTTTNGGGACCTTCTTTAGGNCTCCCTTGAGANAAGGCCNCTTGGTTTATNANAANGTNGGGGTTCNAANTNNTTAAACACTTTTAAGNAACCCCATNGGNNCCACTN]




>consensus_12624#2
TGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGTGTTAGCCATGGATCTGCAATTGAGG
TGTTATCTAGGATTACCATCCCAACATGTGATTCTATATTTGGGAGTCCTGAGACAAGGC
TGTTGATGCACATCACAGGTCTTCTTCCATGGCTTGGGTTGCAGCTCACCAAAGATGCAT
CTTCCCTCGGGTCATCTTCACCTATACAAGAGCAGGATCAGNAAGCTTACTATGTGGCAT
CCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTAGATGATTTAGCGGAAGTCTTCAGAG
CATAACTCCTTTGGAGAAAATCATCTCCCCTAGAAAGATCTTTTGCACGGNGCTTCGCCG
CCAATATTGTTCCGNAGTNGTTCCCAAANGACTTCAACCTCTTGGAATTTTNGGGACCTT
CTTTAGGNCTCCCTTGAGANAAGGCCNCTTGGTTTATNANAANGTNGGGGTTCNAANTNN
TTAAACACTTTTAAGNAACCCCATNGGNNCCACTN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12624#0      GGTTCTGAAGCACTTAAGTGGGCTATGGAGTGCACATCTCGTCACTTGGCATGTCGGTCA 60
consensus_12624#1      ------------------------------------------------------------
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      CACCAGATATATCGTGCTTTACGCCCCAGTGTTAAAAGCGATAGCTGTGTATTGCTTATG 120
consensus_12624#1      ------------------------------------------------------------
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      AGGTGCATCCACAGATGCTTGGGTAACCCTGTTCCAGCTGTTCTGGGTTTTGCAATGGAG 180
consensus_12624#1      ------------------------------------------------------------
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      ATATTGTTGACTCTTCAAGTCATGGTTGAGAACATGGAACCTGAGAAGGTGATACTTTAC 240
consensus_12624#1      ------------------------------------------------------------
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      CCACAGCTCTTCTGGGGCTGTGTTGCACTGATGCATACCGATTATGTGCACATATATTGC 300
consensus_12624#1      ------------------------------------------------------------
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      CAGGTGCTTGAATTGTTCTGTAGGGTAATCGATCGCTTGACGTTCCGTGATCGGACAACT 360
consensus_12624#1      ------------------------------------------------------------
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      GAAAATGTGTTACTGTCCAGCATGCCACGTGATGAGTTTGACATCAATGGGTATACAAGC 420
consensus_12624#1      --------------------------------------------------GTATCTTTGA 10
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      GACCTCCACAGGCTGGAATCGAGAACCACGTCAGAGAGATTGCTATCCGTGACAGAGACT 480
consensus_12624#1      GACCTCCACAGGCTGGAATCGAGAACCACGTCAGAGAGATTGCTATCCGTGACAGAGACT 70
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      GGGAAAGTTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGT 540
consensus_12624#1      GGGAAAGCTCCTGATTTCGAAGGGGTGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGT 130
consensus_12624#2      -------------------------TGCAGCCATTGGTGCTGAAAGGGCTTATGTCTAGT 35
                                                ***********************************

consensus_12624#0      GTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCT 600
consensus_12624#1      GTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCT 190
consensus_12624#2      GTTAGCCATGGATCTGCAATTGAGGTGTTATCTAGGATTACCATCCCAACATGTGATTCT 95
                       ************************************************************

consensus_12624#0      ATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTT 660
consensus_12624#1      ATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTT 250
consensus_12624#2      ATATTTGGGAGTCCTGAGACAAGGCTGTTGATGCACATCACAGGTCTTCTTCCATGGCTT 155
                       ************************************************************

consensus_12624#0      GGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAG 720
consensus_12624#1      GGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAA 310
consensus_12624#2      GGGTTGCAGCTCACCAAAGATGCATCTTCCCTCGGGTCATCTTCACCTATACAAGAGCAG 215
                       *********************************************************** 

consensus_12624#0      AATCAGAAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTA 780
consensus_12624#1      AATCAGAAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTA 370
consensus_12624#2      GATCAGNAAGCTTACTATGTGGCATCCAACATTTCGGTGTGGTGCCGTGTCAAATCTTTA 275
                        ***** *****************************************************

consensus_12624#0      GATGATTTAGCGGAAGTCTTCAGAGCATA-CTCCTTTGGAGAAA-TCATCTCCC-TAGAA 837
consensus_12624#1      GATGATTTAGCGGAAGTCTTCAGAGCATA-CTCCTTTGGAGAAA-TCATCTCCC-TAGAA 427
consensus_12624#2      GATGATTTAGCGGAAGTCTTCAGAGCATAACTCCTTTGGAGAAAATCATCTCCCCTAGAA 335
                       ***************************** ************** ********* *****

consensus_12624#0      GATCTTTTTGCACG-CGCTTCGCCGCCAATAT-GTTCCGA-GTGGTTCCCTAAGCACTC- 893
consensus_12624#1      GATCTTTTTGCACG-CGCTTCGCCGCCAATAT-GTTCCGA-GTGGTTCCCTAAGCACTC- 483
consensus_12624#2      AGATCTTTTGCACGGNGCTTCGCCGCCAATATTGTTCCGNAGTNGTTCCCAAANGACTTC 395
                            *********  **************** ******  ** ****** **  ***  

consensus_12624#0      -ATCTCTGGCA--TTTGGGCACCTGCTT-AGGCT--CCTTGAGAGAGGTCCTCT-GGATT 946
consensus_12624#1      -ATCTCTGGCA--TTTGGGCACCTGCTT-AGGCT--CCTTGAGAGAGGTCCTCT-GGATT 536
consensus_12624#2      AACCTCTTGGAATTTTNGGGACCTTCTTTAGGNCTCCCTTGAGANAAGGCCNCTTGGTTT 455
                        * **** * *  *** ** **** *** ***    ******** * * ** ** ** **

consensus_12624#0      ATCAGAGAGTGGTGCTTCTGATGCTTAAATCACTGTTGCAGCAAAGCCCAGTGGATCCAT 1006
consensus_12624#1      ATCAGAGAGTGGTGCTTCTGATGCTTAAATCACTGTTGCAGCAAACCCCAGTGGATCCAT 596
consensus_12624#2      ATNANAANGTNGGGGTTCNAANTNNTTAAACACTTTT--AAGNAACCCCATNGGNNCCAC 513
                       ** * *  ** * * ***  *    * ** **** **  *   ** ****  **  *** 

consensus_12624#0      CTCAGATACCTCAAGTGTACAATGTTGTGTCACAGCTCGTGGAGAGCGCACTATGTGCAG 1066
consensus_12624#1      CTCAGATACCTCAAGTGTACAATGTTGTGTCACAGCTCGTGGAGAGCGCACTATGTGCAG 656
consensus_12624#2      TN---------------------------------------------------------- 515
                                                                                   

consensus_12624#0      AGGCATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAG 1126
consensus_12624#1      AGGCATTGAATGTGTTGGAGGCGCTCCTACGGAGCTGCAGCGGTGTAACTGGTGGTCAAG 716
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      GTGATGATATTGGATTTGGCGAGAATGGTCACGGGATGGGGGAGAAGGTTCACCAAAGCA 1186
consensus_12624#1      GTGATGATATTGGATTTGGCGAGAATGGTCACGGGATGGGGGAGAAGGTTCACCAAAGCA 776
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      TGCTTCTTCCTCAATCATCATTCAAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCG 1246
consensus_12624#1      TGCTTCTTCCTCAATCATCATTCGAGGCTAGGAGTGGACCTCTTCAATATGCTGCTGCCG 836
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      GTTCAGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGG 1306
consensus_12624#1      GTTCAGGGTTTGGGACTCTAATGGGGCAAGGCGGTGGCAGCGCTGCAGATACTGGAGTGG 896
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      CCACCCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACAT 1366
consensus_12624#1      CCACCCGAGATGTGGCGCTGCAGAATACCCGGTTGCTGCTTGGGCGTGTCCTTGATACAT 956
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      GCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGT 1426
consensus_12624#1      GCGCTCTTGGGCGTAAGAGGGATCATAAGCGCCTTGTGCCGTTTGTGGCGAACATCGGGT 1016
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      AGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATG 1486
consensus_12624#1      AGAAAATGCAGTTGAGTGACCTATGTAAAATGTTTGGTGGCTATATGTGCTAACTGAATG 1076
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      AATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGT 1546
consensus_12624#1      AATGAATGCAGCCAATTTTGTACAGCTAGGAGCGTGATCCAGAAATCGCTGTGCACAGGT 1136
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      TGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAAT 1606
consensus_12624#1      TGACAAGATAGAAGAAGCAGCACTTCCCGCCACCGAAAGACTACCCTAACCAAACTCAAT 1196
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      TTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCTCAGAGGTCGCAGGTT 1666
consensus_12624#1      TTTGACTGTTGTAATATCGGAATGTGTTTATTTATCCTGCAACCTCAGAGGTCGCAGGTT 1256
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      TGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGC 1726
consensus_12624#1      TGAAGTATGGTTGTAGCTGTAGACTGCAATTCATTGGATGCACATACACATACATACAGC 1316
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      ATGAGCGAGTGGCACAAGCTCTTTTCTTTTCTTTTTTTTCTTGGCTAGTGTGTATATTGG 1786
consensus_12624#1      ATGAGCGAGTGGCACAAGCTCTTTTCTTTTCTTTTTTTGGTTGGCTAGTGTGTATATTGG 1376
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      AATTGCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTGATTCATTATTA 1846
consensus_12624#1      AATTGCTTGGTGACATCCCGAAGGGGAAGGGACTCCAGTGTAGTGTTTAAATGATTATTA 1436
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      TTGTTACCTGTTGTGTTCATTTATGCACGGAGACGATGTAATCTGTTTGATGTCGCTACC 1906
consensus_12624#1      TTGTTACCTGTTGTGTTCAAAAAAA-ACTTAAAGGAAAAAAA--ACTCGAGG-------- 1485
consensus_12624#2      ------------------------------------------------------------
                                                                                   

consensus_12624#0      GTAGAGTCGAAACATCTCTCGAACAATCTAATTCACCATTCATCGTGAGAAGCTGTTATT 1966
consensus_12624#1      ------------------------------------------------------------
consensus_12624#2      ------------------------------------------------------------