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Oryza sativa
cluster # 12626 cluster # 12626       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12626#0 length = 1044 sequences # 9  
consensus_12626#1 length = 990 sequences # 1  
consensus_12626#2 length = 541 sequences # 1  

consensusID : consensus_12626#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1044
fasta sequence
                              [CTCACCACCTCCGCTTCCACTACCTTCACTCACTCCGCCCATTTCCCCACTCCTCCTCGCCCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCTCGCGGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCTGTACGCGCTGCGGCG-GCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCGCCTAGACTTGGGTAACTCAAATTTGTCAGGCCATCTTGCTCCTGAACTGGGACACCTTGAGCATCTCCAATATCTAGAGCTGTACAAAAACAATATTCAGGGCACTATCCCAGCTGAGCTC-GGGAGTCTGAAGAACCTTATTAGC-TTGGATCTGT-ATAACAACAACATT-ACTGGAACCATACCGAAAGAACTTGGCAAGCTGAGTTCCTT-AGTATTCTTG-CGGCTT-AATGA-CAA-CAGTTTAAA-CGGTCCAATC-CCGAGGGATCTGGCAAAAATATCTAGTCTCAAAGTGATAGATGTCTCGAACAATGATCTTTGCGGCACGATTCCTACTAGCGGGCCTTTTGAGCATATACCCCTGAACAACTTTGA-CAAAAATCCAAGGTTGGAGGGGCCCGAGTTGCAAGGGCTTGCAACATATGACACAAACTGCTGAACGTGCCAATCAGTCCCTGTCGCTCGTGTGATATAGATCAATAGCAAATTAGCTTTA-TCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATACTGCAAGTAAAGACTAGGCTGCAGCTCAACCCTTGTAGTGTAGATAATATTTATCGCAAGCCTGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAGTCTTGATATTTATTGCCAGTTTTGATTTAGTTGCCCTATTATAAGGGACGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB664814             [CTCACCACCTCCGCTTCCACTACCTTCACTCACTCCGCCCATTTCCCCACTCCTCCTCGCCCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCTCGCGGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCTGTACGCGCTGCGGCGCGCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCGCCTAGACTTGGGTAACTCAAATTTGTCAGGCCATCTTGCTCCTGAACTGGGACACCTTGAGCATCTCCAATATCTAGAGCTGTACAAAAACAATATTCAGGGCACTATCCCAGCTGAGCTC GGGAGTCTGAAGAACCTTATTAGC TTGGATCTGT ATAACAACAACATT ACTGGAACCATACCGAAAGAACTTGGCAAGCTGAGTTCCTT AGTATTCTTG CGGCTT AATGA CAA CAGTTTAAA CGGTCCAATC CCGAGGGATCTGGCAAAAATATCTAGTCTCAAAGTGATAGATGTCTCGAACAATGATCTTTGCGGCACGATTCCTACTAGCGGGCCTTTTGAGCATATACCCCTGAACAACTTTGA CAAAAATCCAAGGTTGGAGGGGCCCGAGTTGCAAGGGCTTGCAACATATGACACAAACTGCTGAACGTGCCAATCAGTCCCTGTCGCTCGTGTGATATAGATCAATAGCAAAT                                                                                                                                                                                                                                                                        ]
[+] EMBL AK061114             [                              CACTCCGCCCATTTCCCCACTCCTCCTCGCCCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCTCGCGGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCTGTACGCGCTGCGGCGCGCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCGCCTAGACTTGGGTAACTCAAATTTGTCAGGCCATCTTGCTCCTGAACTGGGACACCTTGAGCATCTCCAATATCTAGAGCTGTACAAAAACAATATTCAGGGCACTATCCCAGCTGAGCTC GGGAGTCTGAAGAACCTTATTAGC TTGGATCTGT ATAACAACAACATT ACTGGAACCATACCGAAAGAACTTGGCAAGCTGAGTTCCTT AGTATTCTTG CGGCTT AATGA CAA CAGTTTAAA CGGTCCAATC CCGAGGGATCTGGCAAAAATATCTAGTCTCAAAGTGATAGATGTCTCGAACAATGATCTTTGCGGCACGATTCCTACTAGCGGGCCTTTTGAGCATATACCCCTGAACAACTTTGA CAAAAATCCAAGGTTGGAGGGGCCCGAGTTGCAAGGGCTTGCAACATATGACACAAACTGCTGAACGTGCCAATCAGTCCCTGTCGCTCGTGTGATATAGATCAATAGCAAATTAGCTTTA TCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATACTGCAAGTAAAGACTAGGCTGCAGCTCAACCCTTGTAGTGTAGATAATATTTATCGCAAGCCTGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAGTCTTGATATTTATTGCCAGTTTTGATTTAGTTGCCCTATTATAAG                                         ]
[+] EMBL AU065176             [                                                      CCTCGCCCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGNCCCCGGCGCTCGCNGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCTGTACGCGCTGCGGCG GCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACNNCTGCACCTGGTTCCACGTCACCNGCGACCGCGCCGGCCGCGTCACCCNCCTAGACTTNGGTAACTCAAATTTGTCAGGCCATCTTGCTCCTGAACTGGGACACCTTGAGCATCTCCAATATCTAGAGCTGTACAAAAACAATATTCAGGGCACTATCCCAGCTGAGCTCGGGGAGTCTGAAGAACCTTATTAGCTTTGGATCTGTAATAACAACAACATTAATTGGAACCATACCGAAAGAACTTGGNAAGCTGAGTTCCTTAAGAATTCTTGNGGGGTTAAANGA CAA AAG TTAAA CGGT CAATCNCCGAGGGTTTTGG AAAAAT TCTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU065168             [                                                      CCTCGCTCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCTCGCGGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCTGTACGCGCTGCGGCG GCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCGCCTAGACTTGGGTAACTCAAATTTGTCAGGCCATCTTGCTCCTGAACTGGGAAACCTTGAGCATCTCCAATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU081265             [                                                                   CGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCTCGCGGCGGTTTTNCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCTGTACG GCTGCGGCG GCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACCCCTGCAACTGGTTCCACGTCACCTGCGACCGTGCCGGCCGCGTCAACCGCCTAGACTTGGGTAACTCAAATTTGTCAGGCCATCTTGCTCCTGAACTGGGACAACTTGAGCATCTNCAATATCTAGAGCTGTACAAAAACAATATTAAGGG ACTAT CCAGCTGAGCTC GGGAGTNTGAAGAA CTTATTAGC TTGGTTCTGT ATAA AACAACATT ACTGG ACCATACCGAAAGAACTTGGAAAntga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB664815             [                                                                                                                                                                                                            GGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCGCCTAGACTTGGGTAACTCAAATTTGTCAGGCCATCTTGCTCCTGAACTGGGACACCTTGAGCATCTCCAATATCTAGAGCTGTACAAAAACAATATTCAGGGCACTATCCCAGCTGAGCTC GGGAGTCTGAAGAACCTTATTAGC TTGGATCTGT ATAACAACAACATT ACTGGAACCATACCGAAAGAACTTGGCAAGCTGAGTTCCTT AGTATTCTTG CGGCTT AATGA CAA CAGTTTAAA CGGTCCAATC CCGAGGGATCTGGCAAAAATATCTAGTCTCAAAGTGATAGATGTCTCGAACAATGATCTTTGCGGCACGATTCCTACTAGCGGGCCTTTTGAGCATATACCCCTGAACAACTTTGA CAAAAATCCAAGGTTGGAGGGGCCCGAGTTGCAAGGGCTTGCAACATATGACACAAACTGCTGAACGTGCCAATCAGTCCCTGTCGCTCGTGTGATATAGATCAATAGCAAATTAGCTTTA TCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATACTGCAAGTAAAGACTAGGCTGCAGCTCAACCCTTGTAGTGTAGATAATATTTATCGCAAGCCTGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAGTCTTGATATTTATTGCCAGTGTTGATTTAGTTGCCCTATTATAAGGGACGGGT                                 ]
[+] EMBL C97644               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGT ATAACAACAACATT ACTGGAACCATACCGAAAGAACTTGGCAAGCTGAGTTCCTT AGTATTCTTG CGGCTT AATGA CAA CAGTTTAAA CGGTCCAATC CCGAGGGATCTGGCAAAAATATCTAGTCTCAAAGTGATAGATGTCTCGAACAATGATCTTTGCGGCACGATTCCTACTAGCGGGCCTTTTGAGCATATACCCCTGAACAACTTTGA CAAAAATCCAAGGTTGGAGGGGCCCGAGTTGCAAGGGCTTGCAACATATGACACAAACTGCTGAACGTGCCAATCAGTCCCTGTCGCTCGTGTGATATAGATCAATAGCAAATTAGCTTTA TCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATACTGCAAGTAAAGACTAGGCTGCAGCTCAACCCTTGTAGTGTAGATAATATTTATCGCAAGCCTGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAGTCTTGATATTTATTACCAGncntg                                                              ]
[+] EMBL BI798195             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCTGAGTTCCTT AGTATTCTTG CGGCTT AATGACCAACCAGTTTAAACCGGTCCAATC CCGAGGGATCTGGCAAAAATATCTAGTCTCAAAGTGATAGATGTCTCGAACAATGATCTTTGCGGCACGATTCCTACTAGCGGGCCTTTTGAGCATATACCCCTGAACAACTTTGACCAAAAATCCAAGGTTGGAGGGGCCCGAGTTGCAAGGGCTTGCAACATATGACAC AACTGCTGAACGTGCCAATCAGTCCCTGTCGCTCGTGTGATATAGATCAATAGCAAATTAGCTTTACTCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATACTGCAAGTAAAGACTAGGCTTCAGCTCAACCCTTGTAGTGTAGATAATATTTATCGCAAGCCTGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAaaaa                                                                                   ]
[+] EMBL CF332128             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTACTAGCGGGCCTTTTGAGCATATACCCCTGAACAACTTTGA CAAAAATCCAAGGTTGGAGGGGCCCGAGTTGCAAGGGCTTGCAACATATGACACAAACTGCTGAACGTGCCAATCAGTCCCTGTCGCTCGTGTGATATAGATCAATAGTAAATTAGCTTTA TCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATACTGCAAGTAAAGACTAGGCTGCAGCTCAACCCTTGTAGTGTAGATAATATTTATCGCAAGCCTGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAGTCTTGATATTTATTGCCAGTTTTGATTTAGTTGCCCTATTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12626#0 CTCACCACCTCCGCTTCCACTACCTTCACTCACTCCGCCCATTTCCCCACTCCTCCTCGC CCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCT CGCGGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCT GTACGCGCTGCGGCGGCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACC CTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCGC CTAGACTTGGGTAACTCAAATTTGTCAGGCCATCTTGCTCCTGAACTGGGACACCTTGAG CATCTCCAATATCTAGAGCTGTACAAAAACAATATTCAGGGCACTATCCCAGCTGAGCTC GGGAGTCTGAAGAACCTTATTAGCTTGGATCTGTATAACAACAACATTACTGGAACCATA CCGAAAGAACTTGGCAAGCTGAGTTCCTTAGTATTCTTGCGGCTTAATGACAACAGTTTA AACGGTCCAATCCCGAGGGATCTGGCAAAAATATCTAGTCTCAAAGTGATAGATGTCTCG AACAATGATCTTTGCGGCACGATTCCTACTAGCGGGCCTTTTGAGCATATACCCCTGAAC AACTTTGACAAAAATCCAAGGTTGGAGGGGCCCGAGTTGCAAGGGCTTGCAACATATGAC ACAAACTGCTGAACGTGCCAATCAGTCCCTGTCGCTCGTGTGATATAGATCAATAGCAAA TTAGCTTTATCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATA CTGCAAGTAAAGACTAGGCTGCAGCTCAACCCTTGTAGTGTAGATAATATTTATCGCAAG CCTGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAGTC TTGATATTTATTGCCAGTTTTGATTTAGTTGCCCTATTATAAGGGACGGGTAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12626#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 990
fasta sequence
                              [CACTCCGCCCATTTCCCCACTCCTCCTCGCCCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCTCGCGGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCTGTACGCGCTGCGGCGCGCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCGCCTGTGAGTCCACCTCCCCCCCCCCCACCGCCGCCGCCGCCTCGCCGACTGAGCTGGCTACTACCGGCCGGTTTTGCTCCCTCCGTTGTGTACTGCTTTTGTTTGCTTCGGTGTACTGACCTCTGCCGTAGTATTGGAAATGCGAGGGCTTTGTGCTAGGCCGCTAATGCTTAAATACAGTTTCAAATGGATCTGTGAGTTAATTGACACCAGTTGGTGAAAGGGATATGGTGATTTAGTTGTTCATTCGGTTCTGGTGAGACCGTGATCTACTGGCAAAGAACGTGATTTGTAGATTGTCATTTAATTTTTTTTAAAAGATTTTGTTCTGCCCATGTGGAATCATCGTTGCAATACAGTTTGTCTGTAATAGTAAATGTTACTAGTTAGTTTGTAGCAACAGTAAAGCTACTCACTATATAATATCTACTAATTACTTGCATGTAGTAGTTTGATATCAATACTTTGCACGTTAGCTATGTCATCATGTATTTGCATAATTATGCTGATGATAGCTATAAATGGAACCGGGGAGTACTCCTTGATCCTGCATGGAAATATCGCTGATGCAAGCTATATTCTCTATGTGCGCAATTGATCCACGTAAAACCAAAAAGCAATTATCCAATGATGATTGTCGCGTTACCCATTGGCTGCACAGTTCGCACGTGAGTTACTCCGCTAGCACGCCATGCATCTCGGGAACAATGCATCGCCTGC]

[+] EMBL AK059775             [CACTCCGCCCATTTCCCCACTCCTCCTCGCCCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCTCGCGGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCTGTACGCGCTGCGGCGCGCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCGCCTGTGAGTCCACCTCCCCCCCCCCCACCGCCGCCGCCGCCTCGCCGACTGAGCTGGCTACTACCGGCCGGTTTTGCTCCCTCCGTTGTGTACTGCTTTTGTTTGCTTCGGTGTACTGACCTCTGCCGTAGTATTGGAAATGCGAGGGCTTTGTGCTAGGCCGCTAATGCTTAAATACAGTTTCAAATGGATCTGTGAGTTAATTGACACCAGTTGGTGAAAGGGATATGGTGATTTAGTTGTTCATTCGGTTCTGGTGAGACCGTGATCTACTGGCAAAGAACGTGATTTGTAGATTGTCATTTAATTTTTTTTAAAAGATTTTGTTCTGCCCATGTGGAATCATCGTTGCAATACAGTTTGTCTGTAATAGTAAATGTTACTAGTTAGTTTGTAGCAACAGTAAAGCTACTCACTATATAATATCTACTAATTACTTGCATGTAGTAGTTTGATATCAATACTTTGCACGTTAGCTATGTCATCATGTATTTGCATAATTATGCTGATGATAGCTATAAATGGAACCGGGGAGTACTCCTTGATCCTGCATGGAAATATCGCTGATGCAAGCTATATTCTCTATGTGCGCAATTGATCCACGTAAAACCAAAAAGCAATTATCCAATGATGATTGTCGCGTTACCCATTGGCTGCACAGTTCGCACGTGAGTTACTCCGCTAGCACGCCATGCATCTCGGGAACAATGCATCGCCTGC]


>consensus_12626#1 CACTCCGCCCATTTCCCCACTCCTCCTCGCCCGCATCCGGAACCCTAGCTAAGCTTCGAT GGCGATGGCGGCGGCCTGGTCCCCGGCGCTCGCGGCGGTTTTGCTGGCGGCGGCCGTGGC GTCGGCGTCCAACTCGGAGGGGGACGCGCTGTACGCGCTGCGGCGCGCGCTGGCGGACCC CCGGGGCGTGCTCCAGAGCTGGGACCCGACCCTCGTCAACCCCTGCACCTGGTTCCACGT CACCTGCGACCGCGCCGGCCGCGTCACCCGCCTGTGAGTCCACCTCCCCCCCCCCCACCG CCGCCGCCGCCTCGCCGACTGAGCTGGCTACTACCGGCCGGTTTTGCTCCCTCCGTTGTG TACTGCTTTTGTTTGCTTCGGTGTACTGACCTCTGCCGTAGTATTGGAAATGCGAGGGCT TTGTGCTAGGCCGCTAATGCTTAAATACAGTTTCAAATGGATCTGTGAGTTAATTGACAC CAGTTGGTGAAAGGGATATGGTGATTTAGTTGTTCATTCGGTTCTGGTGAGACCGTGATC TACTGGCAAAGAACGTGATTTGTAGATTGTCATTTAATTTTTTTTAAAAGATTTTGTTCT GCCCATGTGGAATCATCGTTGCAATACAGTTTGTCTGTAATAGTAAATGTTACTAGTTAG TTTGTAGCAACAGTAAAGCTACTCACTATATAATATCTACTAATTACTTGCATGTAGTAG TTTGATATCAATACTTTGCACGTTAGCTATGTCATCATGTATTTGCATAATTATGCTGAT GATAGCTATAAATGGAACCGGGGAGTACTCCTTGATCCTGCATGGAAATATCGCTGATGC AAGCTATATTCTCTATGTGCGCAATTGATCCACGTAAAACCAAAAAGCAATTATCCAATG ATGATTGTCGCGTTACCCATTGGCTGCACAGTTCGCACGTGAGTTACTCCGCTAGCACGC CATGCATCTCGGGAACAATGCATCGCCTGC



consensusID : consensus_12626#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 541
fasta sequence
                              [AAAGACTGCAACTGGAGTCCCTTAGTATTCTTGCGCTTTAAATGGACACAGTTAACGGTCCACATCCCGAGGGATCTGCCAGAAATATCTAGTCTCAAAGTGATAGATGTCTCGAACCATGATCTTTGCGGCCCGATTCCTACTAGCGGCCTTTTGAGCATATACCCCTGAACCACTTTGACCAAAATCCACAGGTTGGAGGGGCCCGAGTTGCACAGGGCTTGGCACACATGATGACACCAACTGCTGAACGTGCCCATCAGTCCCTGTCGCTCGTGTGATATAGATCCATACCAATTAGCTTTATCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATACTGCACAGTAAAGACTAGGCTCAGCTCAACCCNTGTAGTGTAGATAATATTTATCGCACAGCCTGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAGTCTTGATATTTATTGCCCGTTTTGATTTAGTTGCCCTATTATAAGGGACTGGTTCAAAAAAAAAA]

[+] EMBL BI806453             [AAAGACTGCAACTGGAGTCCCTTAGTATTCTTGCGCTTTAAATGGACACAGTTAACGGTCCACATCCCGAGGGATCTGCCAGAAATATCTAGTCTCAAAGTGATAGATGTCTCGAACCATGATCTTTGCGGCCCGATTCCTACTAGCGGCCTTTTGAGCATATACCCCTGAACCACTTTGACCAAAATCCACAGGTTGGAGGGGCCCGAGTTGCACAGGGCTTGGCACACATGATGACACCAACTGCTGAACGTGCCCATCAGTCCCTGTCGCTCGTGTGATATAGATCCATACCAATTAGCTTTATCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATACTGCACAGTAAAGACTAGGCTCAGCTCAACCCNTGTAGTGTAGATAATATTTATCGCACAGCCTGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAGTCTTGATATTTATTGCCCGTTTTGATTTAGTTGCCCTATTATAAGGGACTGGTTCAAAAAAAAAA]


>consensus_12626#2 AAAGACTGCAACTGGAGTCCCTTAGTATTCTTGCGCTTTAAATGGACACAGTTAACGGTC CACATCCCGAGGGATCTGCCAGAAATATCTAGTCTCAAAGTGATAGATGTCTCGAACCAT GATCTTTGCGGCCCGATTCCTACTAGCGGCCTTTTGAGCATATACCCCTGAACCACTTTG ACCAAAATCCACAGGTTGGAGGGGCCCGAGTTGCACAGGGCTTGGCACACATGATGACAC CAACTGCTGAACGTGCCCATCAGTCCCTGTCGCTCGTGTGATATAGATCCATACCAATTA GCTTTATCGGAGTACCTGGTAAATGTGCAAGCTTGGTTGCTTTGCTTGTACGAGATACTG CACAGTAAAGACTAGGCTCAGCTCAACCCNTGTAGTGTAGATAATATTTATCGCACAGCC TGAGGCCCTCTTGACTGATAATACCTGGTAATGTATGGTTGCTTTGATGAACTAAGTCTT GATATTTATTGCCCGTTTTGATTTAGTTGCCCTATTATAAGGGACTGGTTCAAAAAAAAA A



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12626#0      CTCACCACCTCCGCTTCCACTACCTTCACTCACTCCGCCCATTTCCCCACTCCTCCTCGC 60
consensus_12626#2      ------------------------------------------------------------
consensus_12626#1      ------------------------------CACTCCGCCCATTTCCCCACTCCTCCTCGC 30
                                                                                   

consensus_12626#0      CCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCT 120
consensus_12626#2      ------------------------------------------------------------
consensus_12626#1      CCGCATCCGGAACCCTAGCTAAGCTTCGATGGCGATGGCGGCGGCCTGGTCCCCGGCGCT 90
                                                                                   

consensus_12626#0      CGCGGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCT 180
consensus_12626#2      ------------------------------------------------------------
consensus_12626#1      CGCGGCGGTTTTGCTGGCGGCGGCCGTGGCGTCGGCGTCCAACTCGGAGGGGGACGCGCT 150
                                                                                   

consensus_12626#0      GTACGCGCTGCGGCG-GCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGAC 239
consensus_12626#2      ------------------------------------------------------------
consensus_12626#1      GTACGCGCTGCGGCGCGCGCTGGCGGACCCCCGGGGCGTGCTCCAGAGCTGGGACCCGAC 210
                                                                                   

consensus_12626#0      CCTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCG 299
consensus_12626#2      ------------------------------------------------------------
consensus_12626#1      CCTCGTCAACCCCTGCACCTGGTTCCACGTCACCTGCGACCGCGCCGGCCGCGTCACCCG 270
                                                                                   

consensus_12626#0      CCTAGACTTGGGTAACTCAAATTTGTCAGGCCATCTTGCTCCTGAACTGGGACACCTTGA 359
consensus_12626#2      ------------------------------------------------------------
consensus_12626#1      CCT--------GTGAGTCCACCTCCCCCCCCCCCACCGCCGCCGCCGCCTCGCCGACTGA 322
                                                                                   

consensus_12626#0      GCATCTCCAATATCTAGAGCTGTACAAAAACAATATTCAGGGCACTATCCCAGCTGAGCT 419
consensus_12626#2      ------------------------------------------------------------
consensus_12626#1      GC-TGGCTACTACC---GGCCGGTTTTGCTCCCTCCGTTGTGTACTGCTTTTGTTTGCTT 378
                                                                                   

consensus_12626#0      CGGGAGTCTGAAGAACCTTATTAGCTTGGATCTGTATAACAACAACATTACTGGAACCAT 479
consensus_12626#2      ------------------------------------------------------------
consensus_12626#1      CGGTGTACTGA-----CCTCTGCCGTAGTATTGGAAATGCGAGGGCTTT----GTGCTAG 429
                                                                                   

consensus_12626#0      ACCGAAAGAACTTGGCAAGCTGAGTTCCTTAGTATTCTTGCGGCTTAA-TGACAACAGTT 538
consensus_12626#2      -----AAAGACT--GCAACTGGAGTCCCTTAGTATTCTTGCGCTTTAAATGGACACAGTT 53
consensus_12626#1      GCCGCTAATGCT---TAAATACAGTTTCA-AATGGATCTGTGAGTTAATTGACACCAGTT 485
                             *   **    **    ***  *  * *     ** *  **** **    *****

consensus_12626#0      TAAACGGTCCA-ATCCCGAGGGATCTGG-CAAAAATATCTAGTCTCAAAGTGATAGA-TG 595
consensus_12626#2      --AACGGTCCACATCCCGAGGGATCTGC-CAGAAATATCTAGTCTCAAAGTGATAGA-TG 109
consensus_12626#1      GGTGAAAGGGATATGGTGATTTAGTTGTTCATTCGGTTCTGGTGAGACCGTGATCTACTG 545
                                 * **   **   *  **  **      *** **   *  *****  * **

consensus_12626#0      TCTCGAACAATGATCT-----TTGCGGCACGATTCCTACTAGCGGGCCTTTTGAGCATAT 650
consensus_12626#2      TCTCGAACCATGATCT-----TTGCGGCCCGATTCCTACTAGCGG-CCTTTTGAGCATAT 163
consensus_12626#1      GCAAAGAACGTGATTTGTAGATTGTCATTTAATTTTTTTTAAAAGATTTTGT-----TCT 600
                        *    *   **** *     ***       ***  *  **   *   ** *     * *

consensus_12626#0      ACCCCTGAACAACTTTGACAAAAATCCA---AGGTTGGAGGGGCCCGAGTTGC-A-AGGG 705
consensus_12626#2      ACCCCTGAACCACTTTGACCAAAATCCAC--AGGTTGGAGGGGCCCGAGTTGC-ACAGGG 220
consensus_12626#1      GCCCATGTGGAATCATCGTTGCAATACAGTTTGTCTGTAATAGTAAATGTTACTAGTTAG 660
                        *** **    *   *      *** **    *  ** *   *     *** * *    *

consensus_12626#0      CTTGCAACAT--ATGA---CACAAACTGCTGAACGT--GCCAATCAGTCCCTGTCGCTCG 758
consensus_12626#2      CTTGGCACAC--ATGATGACACCAACTGCTGAACGT--GCCCATCAGTCCCTGTCGCTCG 276
consensus_12626#1      TTTGTAGCAACAGTAAAGCTACTCACTATATAATATCTACTAATTACTTGCATGTAGTAG 720
                        ***   **    * *    **  ***    **  *   *  ** * *  *      * *

consensus_12626#0      TGTGATATAGATCAATAGCAAATTAGCTTTATCGGAGTACCTGGTAAATGTGCAAGCTTG 818
consensus_12626#2      TGTGATATAGATCCATACCAA-TTAGCTTTATCGGAGTACCTGGTAAATGTGCAAGCTTG 335
consensus_12626#1      TTTGATATCAATACTTTGCACGTTAGCTATGTC-----ATCATGTATTTGCATAATTATG 775
                       * ******  **   *  **  ****** * **     * *  ***  **   **   **

consensus_12626#0      GTTGCTTTGCTTGTACGAGATACTGCA-AGTAAAGACTAGGC-TGCAGCTCAACCCTTGT 876
consensus_12626#2      GTTGCTTTGCTTGTACGAGATACTGCACAGTAAAGACTAGGC-T-CAGCTCAACCCNTGT 393
consensus_12626#1      CTGATGATAGCTATAAATGGAACCGGGGAGTACTCCTTGATCCTGCATGGAAATATCGCT 835
                        *     *   * **   *  ** *   ****     *   * * **    **      *

consensus_12626#0      AGTGTAGATAATATTTATCGCA-A-GCCTGAGGCCCTCTTGA---CTGATAATACCTGGT 931
consensus_12626#2      AGTGTAGATAATATTTATCGCACA-GCCTGAGGCCCTCTTGA---CTGATAATACCTGGT 449
consensus_12626#1      GATGCAAGCTATATTCTCTATGTGCGCAATTGATCCACGTAAAACCAAAAAGCAATTATC 895
                         ** *    *****          **    *  ** * * *   *  * *  *  *   

consensus_12626#0      AATGTATGGTTGCTTTGATGAACTAAGTCTTGATATTTATTGCCAGTTTTGATTTAGTTG 991
consensus_12626#2      AATGTATGGTTGCTTTGATGAACTAAGTCTTGATATTTATTGCCCGTTTTGATTTAGTTG 509
consensus_12626#1      CAATGATGATTGTCGCGTTACCCATTGGCTGCACAGTTCGCACGTGAGTT-ACTCCGCTA 954
                        *   *** ***    * *   *   * **  * * **    *  *  ** * *  * * 

consensus_12626#0      CCCTATTATAAGGGACGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1044
consensus_12626#2      CCCTATTATAAGGGACTGGTTCAAAAAAAAAA--------------------- 541
consensus_12626#1      GCACGCCATGCATCTCGGGAACAATGCATCGCCTGC----------------- 990
                        *     **      * **   **   *                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)