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Oryza sativa
cluster # 12631 cluster # 12631       Sequences # 11       consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12631#0 length = 2852 sequences # 7  
consensus_12631#1 length = 793 sequences # 1  
 consensus_12631#2 length = 526 sequences # 1  
consensus_12631#3 length = 456 sequences # 1  
consensus_12631#4 length = 402 sequences # 1  
consensusID : consensus_12631#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2852
fasta sequence 
                              [CCCCTTCTCGGCTTCGTCGCCTTCTTCTCCTCCTCGAACAGAAGAGTCGGACCCTTCCAAAAGCGACGGGTAGATTGCCAGCCAGCCCAACTCCTTCCTACTCCTGGTACTACTCCTACATAAGAAGAAGTCCTCCCGACTCCCATCGCGATCCCTCGCCCTGCTCTGCTGCAGTGGGAGTAGGACAAGCGGCCGCGTCGCTCTCCGGTTCCATCCATCCACGGAGTAGTAGAGTGTGCCAGTATTAGTACGAGTGGCAGTTTATTCTGCGTCCTGCTTCGTTCGTCGGTGAGGAGGAGGAGGAGGAGAGAGGGAGGGGGGCAGAGTGGGCGCGGCGGCATTTCGGAGGGGGATGTGTAGCGGCGGCGGCGGCTAGGGTGGTGGTTTGCTGTTCTTCGAGGACAAATATGGCTACTATTCAAGATATAGGTGTCTCTGCAGCTATCAACATACTGAGTGCCATCACTTTCCTGCTAGCGTTTGCTTTCCTGCGACTACAGCCCATCAACGATAGGGTTTACTTCCCAAAGTGGTATCTCAAAGGTGCAAGAGAGAGTCCAAGTCATGGGGGTGCATTTGTGCGGAAGTTTGTCAATTTGGACATGCGATCATACTTGAAGGTCTTAAGTTGGATGCCTGCTGCTCTCAAAATGCCAGAGGATGAGTTAATTAGCCATGCAGGCCTTGATTCAGCTGTCTATCTGCGGATCTACTTAATAGGGCTTAAAATATTTGCTCCAATCACAGTTCTAGCATTTATTATTCTTGTGCCTGTTAATTGGACCAATATTACCCTTCAAAGCTCGAAGGTGCAGCACAGTGATATTGACAAACTTTCAATATCCAACATACCTGTAGGGTCAAAGAGGTTCGCAGCTCACCTGACCATGGCTTATGTTTTCACATTTTGGACATGCTATGTGCTGTTACGGGAGTATGAAATAGTGGCAACAATGCGTCTGCGCTTTCTTGCATCAGAGAAGCGCCGCCCAGATCAGTTCACGGTCCTTGTGCGGAATATACCGCCTGATCCTGATGAATCAATTGGTGAGCTTGTGGAACATTTCTTCCTTGTAAACCATCCTGACCATTATCTTACGCACCAGGTTGTCTATAATGCAAATAAGCTTGATAAGATGGTCAAAGAGAAGAAGAAAATGCAGAATTGGCTTGATTACTATCAGCTGAAATATGAAAGAAATACATCTCAAAGGCCTACTACAAAGACTGGTTTTCTTGGATGTTTTGGTTCAAAGGTGGATGCTATTGAATACTACACATCTGAAATTGAGAGGATAGAAAAGGAAGAAACTGATGAACGTGGAAAGATTATGAAGGATCCAAAATCAGTTGTGCCAGCAGCCTTTGTTTCCTTCCGATCGCGGTGGGGAGCAGCAGTGTGTGCTCAGACACAGCAAACCAGTAATCCAACTGTCTGGTTGACCGAGTGGGCCCCAGAACCTCGTGATGTCTATTGGGATAACCTCTCTATTCCTTTTGTTTACCTGACAATTAGGAGGCTGATAATTGCGGTTGCATTCTTCTTCCTGAACTTCTTTTATGTGCTCCCGATTGCATTTGTTCAGTCCCTTGCAAATATTGAAGGGATTGAGAAGGCAGCTCCATTTCTGAAGCCTTTGATTGAAATGCGTACTATTAAATCATTCATCCAAGGATTTCTGCCAGGAATTGCTCTGAAGATTTTCCTTATATTGCTCCCTAGCATATTAATGTTTATGTCTAAAGTTGAAGGATTGACATCGGTGTCCTCACTGGAGAGGAGATCTGCTTTTAAGTACTATATCTTCTTGTTCTTTAATGTATTCTTGGGAAGCATTATTGCAGGATCTGCTTTAGAGCAGCTCAAAACATTTCTTCACCAATCAGCAAATGAAATACCAAGGACAATTGGTGAAGCAATTCCAATGAAAGCAACCTTTTTTATAACATATGTAATGGTTGATGGTTGGGCTGGGGTAGCTGGTGAAATTTTAAGATTGAAACCATTGATAATCTTCCACTTGAAAAACTTTTTCTTGGTCAAGACTGAGAAAGACAGAGAAGAAGCAATGGACCCTGGAAGCATTGGTTTTGACTCAAATGAGCCTCAAATACAGCTCTATTTCTTGCTCGGACTTGTCTATGCTGTGGTGACACCATTTTTGCTTCCTTTCATATTAATATTCTTTGGGTTAGCATATGTGGTATACCGTCACCAGATAATAAATGTGTACAACC-AAGAATATGAAAGTGCAGCAGCATTTTGGCCAAGTGTTCATGGACGCATAATTGTAGCATTAATCGTATCACAGCTGCTTCTCCTTGG-ATTACT-AAGCACAAAAGGTGCTGGCCAGTCAACACCGGTGC-TCCTTGTTCTCCCTGTTGTAACCTTTTATTTCTATAAATACTGCAAGAATCGCTATGAGCCTGCTTTTGTGGAATATCCATTACAGGATGCAATGCGGAAGGATACCCTAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGATGAATGCCTACATCCACCCGGTGTTCAAAGGCGACGAGGACGACGAGAAGTTCTCCATCTCCGACGAACCAGAGGCGGAGCAGG-TTCTCGTGGCGACAAAGCGCCAGTCCAGACGGAACACCCCAGTTCCGAGTAAATACAATGGCTCTGAATCACCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTAC---A-TT-----AAAGAGCACCAATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAAGGAGGAATGGCAAAATATATATATATATACCAAAAAAAAAAAA]

[+] EMBL AK103608             [CCCCTTCTCGGCTTCGTCGCCTTCTTCTCCTCCTCGAACAGAAGAGTCGGACCCTTCCAAAAGCGACGGGTAGATTGCCAGCCAGCCCAACTCCTTCCTACTCCTGGTACTACTCCTACATAAGAAGAAGTCCTCCCGACTCCCATCGCGATCCCTCGCCCTGCTCTGCTGCAGTGGGAGTAGGACAAGCGGCCGCGTCGCTCTCCGGTTCCATCCATCCACGGAGTAGTAGAGTGTGCCAGTATTAGTACGAGTGGCAGTTTATTCTGCGTCCTGCTTCGTTCGTCGGTGAGGAGGAGGAGGAGGAGAGAGGGAGGGGGGCAGAGTGGGCGCGGCGGCATTTCGGAGGGGGATGTGTAGCGGCGGCGGCGGCTAGGGTGGTGGTTTGCTGTTCTTCGAGGACAAATATGGCTACTATTCAAGATATAGGTGTCTCTGCAGCTATCAACATACTGAGTGCCATCACTTTCCTGCTAGCGTTTGCTTTCCTGCGACTACAGCCCATCAACGATAGGGTTTACTTCCCAAAGTGGTATCTCAAAGGTGCAAGAGAGAGTCCAAGTCATGGGGGTGCATTTGTGCGGAAGTTTGTCAATTTGGACATGCGATCATACTTGAAGGTCTTAAGTTGGATGCCTGCTGCTCTCAAAATGCCAGAGGATGAGTTAATTAGCCATGCAGGCCTTGATTCAGCTGTCTATCTGCGGATCTACTTAATAGGGCTTAAAATATTTGCTCCAATCACAGTTCTAGCATTTATTATTCTTGTGCCTGTTAATTGGACCAATATTACCCTTCAAAGCTCGAAGGTGCAGCACAGTGATATTGACAAACTTTCAATATCCAACATACCTGTAGGGTCAAAGAGGTTCGCAGCTCACCTGACCATGGCTTATGTTTTCACATTTTGGACATGCTATGTGCTGTTACGGGAGTATGAAATAGTGGCAACAATGCGTCTGCGCTTTCTTGCATCAGAGAAGCGCCGCCCAGATCAGTTCACGGTCCTTGTGCGGAATATACCGCCTGATCCTGATGAATCAATTGGTGAGCTTGTGGAACATTTCTTCCTTGTAAACCATCCTGACCATTATCTTACGCACCAGGTTGTCTATAATGCAAATAAGCTTGATAAGATGGTCAAAGAGAAGAAGAAAATGCAGAATTGGCTTGATTACTATCAGCTGAAATATGAAAGAAATACATCTCAAAGGCCTACTACAAAGACTGGTTTTCTTGGATGTTTTGGTTCAAAGGTGGATGCTATTGAATACTACACATCTGAAATTGAGAGGATAGAAAAGGAAGAAACTGATGAACGTGGAAAGATTATGAAGGATCCAAAATCAGTTGTGCCAGCAGCCTTTGTTTCCTTCCGATCGCGGTGGGGAGCAGCAGTGTGTGCTCAGACACAGCAAACCAGTAATCCAACTGTCTGGTTGACCGAGTGGGCCCCAGAACCTCGTGATGTCTATTGGGATAACCTCTCTATTCCTTTTGTTTACCTGACAATTAGGAGGCTGATAATTGCGGTTGCATTCTTCTTCCTGAACTTCTTTTATGTGCTCCCGATTGCATTTGTTCAGTCCCTTGCAAATATTGAAGGGATTGAGAAGGCAGCTCCATTTCTGAAGCCTTTGATTGAAATGCGTACTATTAAATCATTCATCCAAGGATTTCTGCCAGGAATTGCTCTGAAGATTTTCCTTATATTGCTCCCTAGCATATTAATGTTTATGTCTAAAGTTGAAGGATTGACATCGGTGTCCTCACTGGAGAGGAGATCTGCTTTTAAGTACTATATCTTCTTGTTCTTTAATGTATTCTTGGGAAGCATTATTGCAGGATCTGCTTTAGAGCAGCTCAAAACATTTCTTCACCAATCAGCAAATGAAATACCAAGGACAATTGGTGAAGCAATTCCAATGAAAGCAACCTTTTTTATAACATATGTAATGGTTGATGGTTGGGCTGGGGTAGCTGGTGAAATTTTAAGATTGAAACCATTGATAATCTTCCACTTGAAAAACTTTTTCTTGGTCAAGACTGAGAAAGACAGAGAAGAAGCAATGGACCCTGGAAGCATTGGTTTTGACTCAAATGAGCCTCAAATACAGCTCTATTTCTTGCTCGGACTTGTCTATGCTGTGGTGACACCATTTTTGCTTCCTTTCATATTAATATTCTTTGGGTTAGCATATGTGGTATACCGTCACCAGATAATAAATGTGTACAACC AAGAATATGAAAGTGCAGCAGCATTTTGGCCAAGTGTTCATGGACGCATAATTGTAGCATTAATCGTATCACAGCTGCTTCTCCTTGG ATTACT AAGCACAAAAGGTGCTGGCCAGTCAACACCGGTGC TCCTTGTTCTCCCTGTTGTAACCTTTTATTTCTATAAATACTGCAAGAATCGCTATGAGCCTGCTTTTGTGGAATATCCATTACAGGATGCAATGCGGAAGGATACCCTAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGATGAATGCCTACATCCACCCGGTGTTCAAAGGCGACGAGGACGACGAGAAGTTCTCCATCTCCGACGAACCAGAGGCGGAGCAGG TTCTCGTGGCGACAAAGCGCCAGTCCAGACGGAACACCCCAGTTCCGAGTAAATACAATGGCTCTGAATCACCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTAC   A TT     AAAGAGCACCAATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAAGGAGGAATGGCAAAATATATATATATATACC            ]
[+] EMBL CF197058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCAAACCAGTAATCCAACTGTCTGGTTGACCGAGTGGGCCCCAGAACCTCGTGATGTCTATTGGGATAACCTCTCTATTCCTTTTGTTTACCTGACAATTAGGAGGCTGATAATTGCAGTTGCATTCTTCTTCCTGAACTTCTTTTATGTGCTCCCGATTGCATTTGTTCAGTCCCTTGCAAATATTGAAGGGATTGAGAAGGCAGCTCCATTTCTGAAGCCTTTGATTGAAATGCGTACTATTAAATCATTCATCCAAGGATTTCTGCCAGGAATTGCTCTGAAGATTTTCCTTATATTGCTCCCTAGCATATTAATGTTTATGTCTAAAGTTGAAGGATTGACATCGGTGTCCTCACTGGAGAGNAGATCTGCTTTTAAGTACTATATCTTCTTGTTCTTTAATGTATTCTTGGGAAGCATTATTGCNNNATCTGCTTTNNNGCAGNNNNNNNCATTTCNTNNNC NTCAGCANATnnnnta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU183243             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              agGCGTACTATTAAATCATTCATCCAAGGATTTCTGCCAGGAATTGCTCTGAAGATTTTCCTTATATTGCTCCCTAGCATATTAATGTTTATGTCTAAAGTTGAAGGATTGACATCGGTGTCCTCACTGGAGAGGAGATCTGCTTTTAAGTACTATATCTTCTTGTTCTTTAATGTATTCTTGGGAAGCATTATTGCAGGATCTGCTTTAGAGCAGCTCAAAACATTTCTTCACCAATCAGCAAATGAAATACCAAGGACAATTGGTGAAGCAATTCCAATGAAAGCAACCTTTTTTATAACATATGTAATGGTTGATGGTTGGGCTGGGGTAGCTGGTGAAATTTTAAGATTGAAACCATTGATAATCTTCCACTTGAAAAACTTTTTCTTGGTCAAGACTGAGAAAGACAGAGAAGAAGCAATGGACCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB628297             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCTTGGTCAAGNCTGAGAAAGACAGAGAAGAAGCAATGGACCCTGGAAGCATTGGTTTTGACTCAAATGAGCCTCAAATACAGCTCTATTTCTTGCTCGGACTTGTCTATGCTGTGGTGACACCATTTTTGCTTCCTTTCATATTAATATTCTTTGGGTTAGCATATGTGGTATACCGTCACCAGATAATAAATGTGTACAACC AAGAATATGAAAGTGCAGCAGCATTTTGGCCAAGTGTTCATGGACGCATAATTGTAGCATTAATCGTATCACAGCTGCTTCTCCTTGG ATTACT AAGCACAAAAGGTGCTGGCCAGTCAACACCGGTGC TCCTTGTTCTCCCTGTTGTAACCTTTTATTTCTATAAATACTGCAAGAATCGCTATGAGCCTGCTTTTGTGGAATATCCATTACAGGATGCAATGCGGAAGGATACCCTAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGATGAATGCCTACATCCACCCGGTGTTCAAAGGCGACGAGGACGACGAGAAGTTCTCCATCTCCGACGAACCAGAGGCGGAGCAGG TTCTCGTGGCGACAAAGCGCCAGTCCAGACGGAACACCCCAGTTCCGAGTAAATACAATGGCTCTGAATCACCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTAC   A TTAAGTAAAAGAGCACCAATAATGGTTTTGAGGATCGGTTTTG                                                     ]
[-] EMBL CF325331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTGTACAACCAAAGAATATGAAAGTGCAGCAGCATTTTGGCCAAGTGTTCATGGACGCATAATTGTAGCATTAATCGTATCACAGCTGCTTCTCCTTGG ATTACT AAGCACAAAAGGTGCTGGCCAGTCAACACCGGTGCNTCCTTGTTCTCCCTGTTGTAACCTTTTATTTCTATAAATACTGCAAGAATCGCTATGAGCCTGCTTTTGTGGAATATCCATTACAGGATGCAATGCGGAAGGATACCCTAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGATGAATGCCTACATCCACCCGGTGTTCAAAGGCGACGAGGACGACGAGAAGTTCTCCATCTCCGACGAACCAGAGGCGGAGCAGG TTCTCGTGGCGACAAAGCGCCAGTCCAGACGGAACACCCCAGTTCCGAGTAAATACAATGGCTCTGAATCACCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTAC   A TT     AAAGAGCACCAATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAAGGAGGAATGGCAAAATATATATATATAAAAAAAAAAAAAAAAA]
[+] EMBL BM420354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCTCCTTGGAATTACTAAAGC CACAAAGT CT GCCAGTCAACACCGGTGC TCCTTGTTCTCCCTGTTGTAACCTTTTATTTCTATAAATACTGCAAGAATCGCTATGAGCCTGCTTTTGTGGAATATCCCTTACAGGAT C ATGCGGAAGGATACCCTAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGATGAATGCCTACATCCACCCGGTGTTCAAAGGCGACGAGGACGACGAGAAGTTCTCCATCTCCGACGAACCAGAGGCGGAGCAGG TTCTCGTGGCGAC AAGCGCCAGTCCAGACGGAACACCCCAGTTCCGAGTAAATACAATGGCTCTGAATCACCTTCCCTTGCTGAAATTGTAAATGATC ACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTACTTAAGTA     AAAGAGCCCCCATAATGGTTTTGAGGATCGGTTTTaaaaaaaaa                                             ]
[+] EMBL OSC2481              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGTGCTNGCCAGTCAACACCGGTGC TCCTTGTTCTCCCTGTTGTAACCTNTTATTTCTATAAATACTGCAAGAATCGCTATGAGCCTGCTTTTGTGGAATATCCATTACAGGATGCAATGCGGAAGGATACCCTAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGATGAATGCCTACATCCACCCGGTGTTCAAAGGCGACGAGGACGACGAGAAGTTCTCCATCTCCGACGAACCAGAGGCG  GCAGGNTTCTCGTtgg                                                                                                                                                                                                                                                       ]




>consensus_12631#0
CCCCTTCTCGGCTTCGTCGCCTTCTTCTCCTCCTCGAACAGAAGAGTCGGACCCTTCCAA
AAGCGACGGGTAGATTGCCAGCCAGCCCAACTCCTTCCTACTCCTGGTACTACTCCTACA
TAAGAAGAAGTCCTCCCGACTCCCATCGCGATCCCTCGCCCTGCTCTGCTGCAGTGGGAG
TAGGACAAGCGGCCGCGTCGCTCTCCGGTTCCATCCATCCACGGAGTAGTAGAGTGTGCC
AGTATTAGTACGAGTGGCAGTTTATTCTGCGTCCTGCTTCGTTCGTCGGTGAGGAGGAGG
AGGAGGAGAGAGGGAGGGGGGCAGAGTGGGCGCGGCGGCATTTCGGAGGGGGATGTGTAG
CGGCGGCGGCGGCTAGGGTGGTGGTTTGCTGTTCTTCGAGGACAAATATGGCTACTATTC
AAGATATAGGTGTCTCTGCAGCTATCAACATACTGAGTGCCATCACTTTCCTGCTAGCGT
TTGCTTTCCTGCGACTACAGCCCATCAACGATAGGGTTTACTTCCCAAAGTGGTATCTCA
AAGGTGCAAGAGAGAGTCCAAGTCATGGGGGTGCATTTGTGCGGAAGTTTGTCAATTTGG
ACATGCGATCATACTTGAAGGTCTTAAGTTGGATGCCTGCTGCTCTCAAAATGCCAGAGG
ATGAGTTAATTAGCCATGCAGGCCTTGATTCAGCTGTCTATCTGCGGATCTACTTAATAG
GGCTTAAAATATTTGCTCCAATCACAGTTCTAGCATTTATTATTCTTGTGCCTGTTAATT
GGACCAATATTACCCTTCAAAGCTCGAAGGTGCAGCACAGTGATATTGACAAACTTTCAA
TATCCAACATACCTGTAGGGTCAAAGAGGTTCGCAGCTCACCTGACCATGGCTTATGTTT
TCACATTTTGGACATGCTATGTGCTGTTACGGGAGTATGAAATAGTGGCAACAATGCGTC
TGCGCTTTCTTGCATCAGAGAAGCGCCGCCCAGATCAGTTCACGGTCCTTGTGCGGAATA
TACCGCCTGATCCTGATGAATCAATTGGTGAGCTTGTGGAACATTTCTTCCTTGTAAACC
ATCCTGACCATTATCTTACGCACCAGGTTGTCTATAATGCAAATAAGCTTGATAAGATGG
TCAAAGAGAAGAAGAAAATGCAGAATTGGCTTGATTACTATCAGCTGAAATATGAAAGAA
ATACATCTCAAAGGCCTACTACAAAGACTGGTTTTCTTGGATGTTTTGGTTCAAAGGTGG
ATGCTATTGAATACTACACATCTGAAATTGAGAGGATAGAAAAGGAAGAAACTGATGAAC
GTGGAAAGATTATGAAGGATCCAAAATCAGTTGTGCCAGCAGCCTTTGTTTCCTTCCGAT
CGCGGTGGGGAGCAGCAGTGTGTGCTCAGACACAGCAAACCAGTAATCCAACTGTCTGGT
TGACCGAGTGGGCCCCAGAACCTCGTGATGTCTATTGGGATAACCTCTCTATTCCTTTTG
TTTACCTGACAATTAGGAGGCTGATAATTGCGGTTGCATTCTTCTTCCTGAACTTCTTTT
ATGTGCTCCCGATTGCATTTGTTCAGTCCCTTGCAAATATTGAAGGGATTGAGAAGGCAG
CTCCATTTCTGAAGCCTTTGATTGAAATGCGTACTATTAAATCATTCATCCAAGGATTTC
TGCCAGGAATTGCTCTGAAGATTTTCCTTATATTGCTCCCTAGCATATTAATGTTTATGT
CTAAAGTTGAAGGATTGACATCGGTGTCCTCACTGGAGAGGAGATCTGCTTTTAAGTACT
ATATCTTCTTGTTCTTTAATGTATTCTTGGGAAGCATTATTGCAGGATCTGCTTTAGAGC
AGCTCAAAACATTTCTTCACCAATCAGCAAATGAAATACCAAGGACAATTGGTGAAGCAA
TTCCAATGAAAGCAACCTTTTTTATAACATATGTAATGGTTGATGGTTGGGCTGGGGTAG
CTGGTGAAATTTTAAGATTGAAACCATTGATAATCTTCCACTTGAAAAACTTTTTCTTGG
TCAAGACTGAGAAAGACAGAGAAGAAGCAATGGACCCTGGAAGCATTGGTTTTGACTCAA
ATGAGCCTCAAATACAGCTCTATTTCTTGCTCGGACTTGTCTATGCTGTGGTGACACCAT
TTTTGCTTCCTTTCATATTAATATTCTTTGGGTTAGCATATGTGGTATACCGTCACCAGA
TAATAAATGTGTACAACCAAGAATATGAAAGTGCAGCAGCATTTTGGCCAAGTGTTCATG
GACGCATAATTGTAGCATTAATCGTATCACAGCTGCTTCTCCTTGGATTACTAAGCACAA
AAGGTGCTGGCCAGTCAACACCGGTGCTCCTTGTTCTCCCTGTTGTAACCTTTTATTTCT
ATAAATACTGCAAGAATCGCTATGAGCCTGCTTTTGTGGAATATCCATTACAGGATGCAA
TGCGGAAGGATACCCTAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGA
TGAATGCCTACATCCACCCGGTGTTCAAAGGCGACGAGGACGACGAGAAGTTCTCCATCT
CCGACGAACCAGAGGCGGAGCAGGTTCTCGTGGCGACAAAGCGCCAGTCCAGACGGAACA
CCCCAGTTCCGAGTAAATACAATGGCTCTGAATCACCTTCCCTTGCTGAAATTGTAAATG
ATCAACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTAC
ATTAAAGAGCACCAATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAAGGAGGAATGGC
AAAATATATATATATATACCAAAAAAAAAAAA

consensusID : consensus_12631#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 793
fasta sequence 
                              [TCTGCGCTCCTGCTTCGTTCGTCGGTGAGGAGGAGGAGGAGGAGGAGAGAGGGAGGGGGGCAGAGTGGGCGCGGCGGCATTTCGGAGGGGGATGTGTAGCGGCGGCGGCGGCGGCTAGGGTGGTGGTTTGCTGTTCTTCGAGCTAGCATCTGTAGTAATTCTCGCAAGTTATTTGAAGGACAAATATGGCTACTATTCAAGATATAGGTGTCTCTGCAGCTATCAACATACTGAGTGCCATCACTTTCCTGCTAGCGTTTGCTTTCCTGCGACTACAGCCCATCAACGATAGGGTTTACTTCCCAAAGTGGTATCTCAAAGGTGCAAGAGAGAGTCCAAGTCATGGGGGTGCATTTGTGCGGAAGTTTGTCAATTTGGACATGCGATCATACTTGAAGGTCTTAAGTTGGATGCCTGCTGCTCTCAAAATGCCAGAGGATGAGTTAATTAGCCATGCAGGCCTTGATTCAGCTGTCTATCTGCGGATCTACTTAATAGGGCTTAAAATATTTGCTCCAATCACAGTTCTAGCATTTATTATTCTTGTGCCTGTTAATTGGACCAATATTACCCTTCAAAGCTCGAAGGTGCAGCACAGTGATATTGACAAACTTTCAATATCCAACATACCTGTANGGTCAAAGAGGTTCGCAGCTCACCTGACCATGGCTTATGTTTTCACATTTTGGACATGCTATGTGCTGTTACGGGAGTATGAAATAGTGGCAACAATGCGTCTGCGCTTTCTTGCATCATAGCAGCGCCGCCCAGATCAGTTCACGGTCCTTGTGCG]

[+] EMBL CB628296             [TCTGCGCTCCTGCTTCGTTCGTCGGTGAGGAGGAGGAGGAGGAGGAGAGAGGGAGGGGGGCAGAGTGGGCGCGGCGGCATTTCGGAGGGGGATGTGTAGCGGCGGCGGCGGCGGCTAGGGTGGTGGTTTGCTGTTCTTCGAGCTAGCATCTGTAGTAATTCTCGCAAGTTATTTGAAGGACAAATATGGCTACTATTCAAGATATAGGTGTCTCTGCAGCTATCAACATACTGAGTGCCATCACTTTCCTGCTAGCGTTTGCTTTCCTGCGACTACAGCCCATCAACGATAGGGTTTACTTCCCAAAGTGGTATCTCAAAGGTGCAAGAGAGAGTCCAAGTCATGGGGGTGCATTTGTGCGGAAGTTTGTCAATTTGGACATGCGATCATACTTGAAGGTCTTAAGTTGGATGCCTGCTGCTCTCAAAATGCCAGAGGATGAGTTAATTAGCCATGCAGGCCTTGATTCAGCTGTCTATCTGCGGATCTACTTAATAGGGCTTAAAATATTTGCTCCAATCACAGTTCTAGCATTTATTATTCTTGTGCCTGTTAATTGGACCAATATTACCCTTCAAAGCTCGAAGGTGCAGCACAGTGATATTGACAAACTTTCAATATCCAACATACCTGTANGGTCAAAGAGGTTCGCAGCTCACCTGACCATGGCTTATGTTTTCACATTTTGGACATGCTATGTGCTGTTACGGGAGTATGAAATAGTGGCAACAATGCGTCTGCGCTTTCTTGCATCATAGCAGCGCCGCCCAGATCAGTTCACGGTCCTTGTGCG]




>consensus_12631#1
TCTGCGCTCCTGCTTCGTTCGTCGGTGAGGAGGAGGAGGAGGAGGAGAGAGGGAGGGGGG
CAGAGTGGGCGCGGCGGCATTTCGGAGGGGGATGTGTAGCGGCGGCGGCGGCGGCTAGGG
TGGTGGTTTGCTGTTCTTCGAGCTAGCATCTGTAGTAATTCTCGCAAGTTATTTGAAGGA
CAAATATGGCTACTATTCAAGATATAGGTGTCTCTGCAGCTATCAACATACTGAGTGCCA
TCACTTTCCTGCTAGCGTTTGCTTTCCTGCGACTACAGCCCATCAACGATAGGGTTTACT
TCCCAAAGTGGTATCTCAAAGGTGCAAGAGAGAGTCCAAGTCATGGGGGTGCATTTGTGC
GGAAGTTTGTCAATTTGGACATGCGATCATACTTGAAGGTCTTAAGTTGGATGCCTGCTG
CTCTCAAAATGCCAGAGGATGAGTTAATTAGCCATGCAGGCCTTGATTCAGCTGTCTATC
TGCGGATCTACTTAATAGGGCTTAAAATATTTGCTCCAATCACAGTTCTAGCATTTATTA
TTCTTGTGCCTGTTAATTGGACCAATATTACCCTTCAAAGCTCGAAGGTGCAGCACAGTG
ATATTGACAAACTTTCAATATCCAACATACCTGTANGGTCAAAGAGGTTCGCAGCTCACC
TGACCATGGCTTATGTTTTCACATTTTGGACATGCTATGTGCTGTTACGGGAGTATGAAA
TAGTGGCAACAATGCGTCTGCGCTTTCTTGCATCATAGCAGCGCCGCCCAGATCAGTTCA
CGGTCCTTGTGCG

consensusID : consensus_12631#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 526
fasta sequence 
                              [CCTTTTATTTCTATAAATACTGCCAAGAATCGCTATGAGCCCTGCTTTTGTGGAATATCCACTTACCACGGATCCAATGCCGGAAGGATACCCCTATGAACCGCGCCACAGAGAGCCCACGGGTTCGACCTCCAAAGGATACCTGATGAATGCCTACATCCACCCCGGTGTTCAAAGGCGACGAGGACGACGAGAATGTTCTCCATTCTCCGACGAACCCACGAGGCGGAGCCACGGTTTCTCGTGGCGACCAAGCGCCCACGTCCACGACCGGAACACCCCCACGTTCCGAGTAAATACCACATGGCTCTGAATCACCCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTACCACTTAAGTAAAAGAGCACCCAATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAGGAGCCAATGGCCAAATATATATATATACCCATGGGCTCCCGATGTTGCTTTGCTGTAAAAAAAAAA]

[+] EMBL BQ906292             [CCTTTTATTTCTATAAATACTGCCAAGAATCGCTATGAGCCCTGCTTTTGTGGAATATCCACTTACCACGGATCCAATGCCGGAAGGATACCCCTATGAACCGCGCCACAGAGAGCCCACGGGTTCGACCTCCAAAGGATACCTGATGAATGCCTACATCCACCCCGGTGTTCAAAGGCGACGAGGACGACGAGAATGTTCTCCATTCTCCGACGAACCCACGAGGCGGAGCCACGGTTTCTCGTGGCGACCAAGCGCCCACGTCCACGACCGGAACACCCCCACGTTCCGAGTAAATACCACATGGCTCTGAATCACCCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTACCACTTAAGTAAAAGAGCACCCAATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAGGAGCCAATGGCCAAATATATATATATACCCATGGGCTCCCGATGTTGCTTTGCTGTAAAAAAAAAA]




>consensus_12631#2
CCTTTTATTTCTATAAATACTGCCAAGAATCGCTATGAGCCCTGCTTTTGTGGAATATCC
ACTTACCACGGATCCAATGCCGGAAGGATACCCCTATGAACCGCGCCACAGAGAGCCCAC
GGGTTCGACCTCCAAAGGATACCTGATGAATGCCTACATCCACCCCGGTGTTCAAAGGCG
ACGAGGACGACGAGAATGTTCTCCATTCTCCGACGAACCCACGAGGCGGAGCCACGGTTT
CTCGTGGCGACCAAGCGCCCACGTCCACGACCGGAACACCCCCACGTTCCGAGTAAATAC
CACATGGCTCTGAATCACCCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATA
TAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTACCACTTAAGTAAAAGAGC
ACCCAATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAGGAGCCAATGGCCAAATATAT
ATATATACCCATGGGCTCCCGATGTTGCTTTGCTGTAAAAAAAAAA

consensusID : consensus_12631#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 456
fasta sequence 
                              [AAAAGGATACCCTGGATGGAATGCCTTACAATGCCACCCCAGGGGTTCAAAAGGCGACGAGGACGACGGAGGAAGTGTCGTGCCATGCTCGCGACAGAACCACAGAGGGCGGAGGACAGGNTGCTGCGTGGCGGACANTAAGCGCCCAGTGCCAAGACGGAACAACACCCACGTGTGCCGAGTAAATACCNNATGGCTGCTGGAATGCACCGTGCCCTGGGCTGGAAATTGTAAATGGATGCNACGGCTGATGAAATATAATAGAGTGATGGCTAAGTNAGGTNTTGTGAGTGTTCGACCATGGTGACATTAAGTGAAAAGGAGCACCCATGAATGGTTGTTGAGGATCGTGTTNTGTTTGACAGCAAGGAGCNATGGCCAAATATATATATATACCCATGGGCTCCCGATGTTGCTTTGCTGTATTTTTCACTGTTTTCCTGGTGAAAAAAAAAA]

[+] EMBL BQ908977             [AAAAGGATACCCTGGATGGAATGCCTTACAATGCCACCCCAGGGGTTCAAAAGGCGACGAGGACGACGGAGGAAGTGTCGTGCCATGCTCGCGACAGAACCACAGAGGGCGGAGGACAGGNTGCTGCGTGGCGGACANTAAGCGCCCAGTGCCAAGACGGAACAACACCCACGTGTGCCGAGTAAATACCNNATGGCTGCTGGAATGCACCGTGCCCTGGGCTGGAAATTGTAAATGGATGCNACGGCTGATGAAATATAATAGAGTGATGGCTAAGTNAGGTNTTGTGAGTGTTCGACCATGGTGACATTAAGTGAAAAGGAGCACCCATGAATGGTTGTTGAGGATCGTGTTNTGTTTGACAGCAAGGAGCNATGGCCAAATATATATATATACCCATGGGCTCCCGATGTTGCTTTGCTGTATTTTTCACTGTTTTCCTGGTGAAAAAAAAAA]




>consensus_12631#3
AAAAGGATACCCTGGATGGAATGCCTTACAATGCCACCCCAGGGGTTCAAAAGGCGACGA
GGACGACGGAGGAAGTGTCGTGCCATGCTCGCGACAGAACCACAGAGGGCGGAGGACAGG
NTGCTGCGTGGCGGACANTAAGCGCCCAGTGCCAAGACGGAACAACACCCACGTGTGCCG
AGTAAATACCNNATGGCTGCTGGAATGCACCGTGCCCTGGGCTGGAAATTGTAAATGGAT
GCNACGGCTGATGAAATATAATAGAGTGATGGCTAAGTNAGGTNTTGTGAGTGTTCGACC
ATGGTGACATTAAGTGAAAAGGAGCACCCATGAATGGTTGTTGAGGATCGTGTTNTGTTT
GACAGCAAGGAGCNATGGCCAAATATATATATATACCCATGGGCTCCCGATGTTGCTTTG
CTGTATTTTTCACTGTTTTCCTGGTGAAAAAAAAAA

consensusID : consensus_12631#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence 
                              [TAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGATGAATGCCTACATCCACCCGGTGTTCAAAGTCGACGAGGACGACGAGAAGTTCTCCATCTCCGCGAACCAGAGCGGAGCAGTTTCTCGTGGCGACAAAGCGCCAGTCCAGACGGACACCCCAGTTCCGAGTAAATACAATGGCTCTGAATCACCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTACATTAAGTAAAAGAGCACCCATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAAGGAGCAATGGCAAAATATATATATATACCCATGGGCTCCCGATGTTGCTTTGCTGTAAAAAAAAAA]

[+] EMBL BI811863             [TAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGATGAATGCCTACATCCACCCGGTGTTCAAAGTCGACGAGGACGACGAGAAGTTCTCCATCTCCGCGAACCAGAGCGGAGCAGTTTCTCGTGGCGACAAAGCGCCAGTCCAGACGGACACCCCAGTTCCGAGTAAATACAATGGCTCTGAATCACCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATATAATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTACATTAAGTAAAAGAGCACCCATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAAGGAGCAATGGCAAAATATATATATATACCCATGGGCTCCCGATGTTGCTTTGCTGTAAAAAAAAAA]




>consensus_12631#4
TAGAACGCGCAAGAGAGCCAGGGTTCGACCTCAAAGGATACCTGATGAATGCCTACATCC
ACCCGGTGTTCAAAGTCGACGAGGACGACGAGAAGTTCTCCATCTCCGCGAACCAGAGCG
GAGCAGTTTCTCGTGGCGACAAAGCGCCAGTCCAGACGGACACCCCAGTTCCGAGTAAAT
ACAATGGCTCTGAATCACCTTCCCTTGCTGAAATTGTAAATGATCAACGGCTATAAATAT
AATAGAGGTGATGGCTAGTAGGTTTGTAGTTTCGACATGTACATTAAGTAAAAGAGCACC
CATAATGGTTTTGAGGATCGGTTTTGTTTACAGCAAGGAGCAATGGCAAAATATATATAT
ATACCCATGGGCTCCCGATGTTGCTTTGCTGTAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      CCCCTTCTCGGCTTCGTCGCCTTCTTCTCCTCCTCGAACAGAAGAGTCGGACCCTTCCAA 60
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      AAGCGACGGGTAGATTGCCAGCCAGCCCAACTCCTTCCTACTCCTGGTACTACTCCTACA 120
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TAAGAAGAAGTCCTCCCGACTCCCATCGCGATCCCTCGCCCTGCTCTGCTGCAGTGGGAG 180
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TAGGACAAGCGGCCGCGTCGCTCTCCGGTTCCATCCATCCACGGAGTAGTAGAGTGTGCC 240
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      AGTATTAGTACGAGTGGCAGTTTATTCTGCGTCCTGCTTCGTTCGTCGGTGAGGAGGAGG 300
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      AGGAGGAGAGAGGGAGGGGGGCAGAGTGGGCGCGGCGGCATTTCGGAGGGGGATGTGTAG 360
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      CGGCGGCGGCGGCTAGGGTGGTGGTTTGCTGTTCTTCGAGGACAAATATGGCTACTATTC 420
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      AAGATATAGGTGTCTCTGCAGCTATCAACATACTGAGTGCCATCACTTTCCTGCTAGCGT 480
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TTGCTTTCCTGCGACTACAGCCCATCAACGATAGGGTTTACTTCCCAAAGTGGTATCTCA 540
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      AAGGTGCAAGAGAGAGTCCAAGTCATGGGGGTGCATTTGTGCGGAAGTTTGTCAATTTGG 600
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ACATGCGATCATACTTGAAGGTCTTAAGTTGGATGCCTGCTGCTCTCAAAATGCCAGAGG 660
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ATGAGTTAATTAGCCATGCAGGCCTTGATTCAGCTGTCTATCTGCGGATCTACTTAATAG 720
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      GGCTTAAAATATTTGCTCCAATCACAGTTCTAGCATTTATTATTCTTGTGCCTGTTAATT 780
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      GGACCAATATTACCCTTCAAAGCTCGAAGGTGCAGCACAGTGATATTGACAAACTTTCAA 840
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TATCCAACATACCTGTAGGGTCAAAGAGGTTCGCAGCTCACCTGACCATGGCTTATGTTT 900
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TCACATTTTGGACATGCTATGTGCTGTTACGGGAGTATGAAATAGTGGCAACAATGCGTC 960
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TGCGCTTTCTTGCATCAGAGAAGCGCCGCCCAGATCAGTTCACGGTCCTTGTGCGGAATA 1020
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TACCGCCTGATCCTGATGAATCAATTGGTGAGCTTGTGGAACATTTCTTCCTTGTAAACC 1080
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ATCCTGACCATTATCTTACGCACCAGGTTGTCTATAATGCAAATAAGCTTGATAAGATGG 1140
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TCAAAGAGAAGAAGAAAATGCAGAATTGGCTTGATTACTATCAGCTGAAATATGAAAGAA 1200
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ATACATCTCAAAGGCCTACTACAAAGACTGGTTTTCTTGGATGTTTTGGTTCAAAGGTGG 1260
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ATGCTATTGAATACTACACATCTGAAATTGAGAGGATAGAAAAGGAAGAAACTGATGAAC 1320
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      GTGGAAAGATTATGAAGGATCCAAAATCAGTTGTGCCAGCAGCCTTTGTTTCCTTCCGAT 1380
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      CGCGGTGGGGAGCAGCAGTGTGTGCTCAGACACAGCAAACCAGTAATCCAACTGTCTGGT 1440
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TGACCGAGTGGGCCCCAGAACCTCGTGATGTCTATTGGGATAACCTCTCTATTCCTTTTG 1500
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TTTACCTGACAATTAGGAGGCTGATAATTGCGGTTGCATTCTTCTTCCTGAACTTCTTTT 1560
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ATGTGCTCCCGATTGCATTTGTTCAGTCCCTTGCAAATATTGAAGGGATTGAGAAGGCAG 1620
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      CTCCATTTCTGAAGCCTTTGATTGAAATGCGTACTATTAAATCATTCATCCAAGGATTTC 1680
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TGCCAGGAATTGCTCTGAAGATTTTCCTTATATTGCTCCCTAGCATATTAATGTTTATGT 1740
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      CTAAAGTTGAAGGATTGACATCGGTGTCCTCACTGGAGAGGAGATCTGCTTTTAAGTACT 1800
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ATATCTTCTTGTTCTTTAATGTATTCTTGGGAAGCATTATTGCAGGATCTGCTTTAGAGC 1860
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      AGCTCAAAACATTTCTTCACCAATCAGCAAATGAAATACCAAGGACAATTGGTGAAGCAA 1920
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TTCCAATGAAAGCAACCTTTTTTATAACATATGTAATGGTTGATGGTTGGGCTGGGGTAG 1980
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      CTGGTGAAATTTTAAGATTGAAACCATTGATAATCTTCCACTTGAAAAACTTTTTCTTGG 2040
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TCAAGACTGAGAAAGACAGAGAAGAAGCAATGGACCCTGGAAGCATTGGTTTTGACTCAA 2100
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ATGAGCCTCAAATACAGCTCTATTTCTTGCTCGGACTTGTCTATGCTGTGGTGACACCAT 2160
consensus_12631#1      ------------------------------------------------------------
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TTTTGCTTCCTTTCATATTAATATTCTTTGGGTTAGCATATGTGGTATACCGTCACCAGA 2220
consensus_12631#1      -----------------------------------TCTGCGCTCCTGCTTCGTTCGTCGG 25
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      TAATAAATGTGTACAACCAAGAATATGAAAGTGCAGCAGCATTTTGGCCAAGTGTTCATG 2280
consensus_12631#1      TGAGGAGGAGGAGGAGGAGGAGAGAGGGAGGGGGGCAGAGTGGGCGCGGCGGCATTTCGG 85
                                                                                   

consensus_12631#2      ------------------------------------------------------------
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      GACGCATAATTGTAGCATTAATCGTATCACAGCTGCTTCTCCTTGGATTACTAAGCACAA 2340
consensus_12631#1      AGGGGGATGTGTAGCGGCGGCGGCGGCGGCTAGGGTGGTGGTTTGCTGTTCTTCGAGCTA 145
                                                                                   

consensus_12631#2      ------------------------------------------------CCTTTTATTTCT 12
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      AAGGTGCTGGCCAGTCAACACCGGTGCTCCTTGTTCTCCCTGTTGTAACCTTTTATTTCT 2400
consensus_12631#1      GCATCTGTAGTAATTCTCGCAAGTTATTTGAAGGACAAATATGGCTACTATTCAAGATAT 205
                                                                                   

consensus_12631#2      ATAAATACTGCCAAGAATCGCTATGAGCCCTGCTTTTGTGGAATATCCACTTACCACGGA 72
consensus_12631#4      ------------------------------------------------------------
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ATAAATACTGC-AAGAATCGCTATGAGCC-TGCTTTTGTGGAATATCCATT----ACAGG 2454
consensus_12631#1      AGGTGTCTCTGCAGCTATCAACATACTGAGTGCCATCACTTTCCTGCTAGCGTTTGCTTT 265
                                                                                   

consensus_12631#2      TCCAATGCCGGAAGGATACCCCTATGAACCGCGCCACAGAGAGCCCACGGGTTCGACCTC 132
consensus_12631#4      ------------------------TAGAACGCGCAA--GAGAGCCA--GGGTTCGACCTC 32
consensus_12631#3      ------------------------------------------------------------
consensus_12631#0      ATGCAATGCGGAAGGATACCC---TAGAACGCGCAA--GAGAGCCA--GGGTTCGACCTC 2507
consensus_12631#1      CCTGCGACTACAGCCCATCAACGATAGGGTTTACTTCCCAAAGTGG-TATCTCAAAGGTG 324
                                                                                   

consensus_12631#2      CAAAGGATACCT--GATG-AATGCCT-ACAT--CCACCCC-GGTGTTCAAA--GGCGACG 183
consensus_12631#4      -AAAGGATACCT--GATG-AATGCCT-ACAT--CCACCC--GGTGTTCAAA--GTCGACG 81
consensus_12631#3      AAAAGGATACCCTGGATGGAATGCCTTACAATGCCACCCCAGGGGTTCAAAA-GGCGACG 59
consensus_12631#0      -AAAGGATACCT--GATG-AATGCCT-ACAT--CCACCC--GGTGTTCAAA--GGCGACG 2556
consensus_12631#1      CAAGAGAGAGTCCAAGTCATGGGGGT-GCATTTGTGCGGAAGTTTGTCAATTTGGACATG 383
                        **  ** *       *     *  *  **      *    *    ****   *   * *

consensus_12631#2      AGGACGACG-AGAATGTTCT---CCATTCTC-CGACGAACCCAC--GAGGCGGAGCCACG 236
consensus_12631#4      AGGACGACG-AGAA-GTTCT---CCAT-CTC-CG-CGAACC-----AGAGCGGAGC---A 125
consensus_12631#3      AGGACGACGGAGGAAGTGTCGTGCCATGCTCGCGACAGAACCACAGAGGGCGGAGGACAG 119
consensus_12631#0      AGGACGACG-AGAA-GTTCT---CCAT-CTC-CGACGAACC----AGAGGCGGAGC---A 2602
consensus_12631#1      CGATCATACTTGAAGGTCTTAAGTTGGATGCCTGCTGCTCTCAA-AATGCCAGAGGATGA 442
                        *  *      * * **             *  *                * ***     

consensus_12631#2      GTTTCT-CGTGGCG---ACCAAGCGCCCACGTCCACGACCGGA--ACACCCCCACGTTCC 290
consensus_12631#4      GTTTCT-CGTGGCG---ACAAAGCGCCA--GTCCA-GAC--GG--ACACCCCA--GTTCC 172
consensus_12631#3      GNTGCTGCGTGGCGGACANTAAGCGCCCAGTGCCAAGACGGAACAACACCCACGTGTGCC 179
consensus_12631#0      GGTTCT-CGTGGCG---ACAAAGCGCCA--GTCCA-GACGGAA---CACCCCA--GTTCC 2650
consensus_12631#1      GTTAATTAGCCATGCAGGCCTTGATTCAGCTGTCTATCTGCGGATCTACTTAATAGGGCT 502
                       * *  *  *    *        *   *      *             **      *  * 

consensus_12631#2      GAGTAAATACCACATGGCTCT--GAAT-CACCCTTCCCTTGCT--GAAATTGTAAATGAT 345
consensus_12631#4      GAGTAAATACAA--TGGCTCT--GAAT-CACC-TTCCCTTGCT--GAAATTGTAAATGAT 224
consensus_12631#3      GAGTAAATACCNNATGGCTGCTGGAATGCACCGTGCCCTGGGCTGGAAATTGTAAATGGA 239
consensus_12631#0      GAGTAAATACAA--TGGCTCT--GAAT-CACC-TTCCCTTGCT--GAAATTGTAAATGAT 2702
consensus_12631#1      TAAAATATTTGCTCCAATCAC--AGTTCTAGCATTTATTATTCTTGTGCCTGTTAATTGG 560
                        *  * **                  *  * * *    *      *    *** ***   

consensus_12631#2      --CAACGGCTAT--AAATATAATAGAGGTGATGGCTAG--TAGGTTT-GT-AGT-TTCGA 396
consensus_12631#4      --CAACGGCTAT--AAATATAATAGAGGTGATGGCTAG--TAGGTTT-GT-AGT-TTCGA 275
consensus_12631#3      TGCNACGGCTGATGAAATATAATAGAG-TGATGGCTAAGTNAGGTNTTGTGAGTGTTCGA 298
consensus_12631#0      --CAACGGCTAT--AAATATAATAGAGGTGATGGCTAG--TAGGTTT-GT-AGT-TTCGA 2753
consensus_12631#1      ACCAATATTACCCTTCAAAGCTCGAAGGTGCAGCACAG--TGATATTGACAAACTTTCAA 618
                         * *           * *      ** **  *   *         *    *   *** *

consensus_12631#2      C-ATGTACCACTTAAGTAAAA--GAGCACCCAATAATGGTT-TTGAGGATCG-GTTTTGT 451
consensus_12631#4      C-ATGTACA--TTAAGTAAAA--GAGCACCCA-TAATGGTT-TTGAGGATCG-GTTTTGT 327
consensus_12631#3      CCATGGTGACATTAAGTGAAAAGGAGCACCCATGAATGGTTGTTGAGGATCGTGTTNTGT 358
consensus_12631#0      C-ATGTACA-------TTAAA--GAGCACCAA-TAATGGTT-TTGAGGATCG-GTTTTGT 2800
consensus_12631#1      T-ATCCAACATACCTGTANGGTCAAAGAGGTTCGCAGCTCACCTGACCATGGCTTATGTT 677
                         **            *       *  *       *       ***  ** *  *    *

consensus_12631#2      TT-ACAGCAGGAG---CCAATGGCCAAATATATATATATAC-CCATGGGCTCC----CGA 502
consensus_12631#4      TT-ACAGCAAGGA---GCAATGGCAAAATATATATATATAC-CCATGGGCTCC----CGA 378
consensus_12631#3      TTGACAGCAAGGA---GCNATGGCCAAATATATATATATAC-CCATGGGCTCC----CGA 410
consensus_12631#0      TT-ACAGCAAGGA---GGAATGGCAAAATATATATATATATACCAAAAAAAAA----AAA 2852
consensus_12631#1      TTCACATTTTGGACATGCTATGTGCTGTTACGGGAGTATGAAATAGTGGCAACAATGCGT 737
                       ** ***    *        ***      **      ***     *               

consensus_12631#2      TGTTGCTTTGCTGTAAAAAAAAAA-------------------------------- 526
consensus_12631#4      TGTTGCTTTGCTGTAAAAAAAAAA-------------------------------- 402
consensus_12631#3      TGTTGCTTTGCTGTATTTTTCACTGTTTTCCTGGTGAAAAAAAAAA---------- 456
consensus_12631#0      --------------------------------------------------------
consensus_12631#1      CTGCGCTTTCTTGCATCATAGCAGCGCCGCCCAGATCAGTTCACGGTCCTTGTGCG 793


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)