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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 3603 fasta sequence
[AGTTCGATTCGATTCGATTCGATTTCGTTTTCTCTCAGGAAGGAACACGAGCGGTTGGGTTCATCCCCCTCCTCGCCGTGTTCTTCGCTCCGCCGCCGGGCGCCGCCGGATCGGTCGCCCCACCCCCCCCCCGCCCCCTCCCTCCCGAAGCTTCTCGAACCTTCCTCCCCCCTACCAGGAGCCGTCCCGAGGCGGCCTAGGGTTCCCGCGGGCGGCCGCGCGATTTCTAGGGTTTTGGGTCCTTTGCTCGGGGCATGGGCCCTGCGGTTCGGCGGCAGTGACGAGCGGCAAGCCACCTAGAGGAGGAGATGATTACGGAGAAGCCGAGCTGGATTCGCCACGAGGGCCTGCAGATCTTCTCTATCGACATCCAGCCGGGCGGCATCCGCTTCGCCACCGGCGGCGGCGACCAGAAGATTCGCATATGGAGCATGAAATCAGTGGCCAAAGACAATGACAGTGATGATTCCAGCCAAAGGTTGCTGGCTACAATTCGAGACCATTTTGGAACAGTAAACTGTGTGAGATGGGCCCATCATGGCCGCTATCTTGCTTCAGGATCGGACGATCAAGTTATCCAAATTCATGAAAGAAAAGCTGGCACTGGAACATCTGAATTTGGAAGTGGAGAACCTCCAGATGTAGAAAACTGGAAGGTTGTTATGACCTTAAGAGGGCATACTGCCGATGTGGTTGACCTTAATTGGTCCCCTGATGACTCGACATTGGCTAGCGGCAGTTTGGATAATACTGTTCACATATGGAGCATGGCCAATGGCATATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTATCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTGACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGCTTGGTTCGACATTTTTTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGAAACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTCTGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTATTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTCAAAGTGTGGTTGATTTATCTTGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGGATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGGGATGCTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATATAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCAAAAAGGTTTCCAGTGTCCAGCAATTTCAATCACCCCCCCAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAGAAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAGTGAAACAAAGAGAATACCGGCGTCCTGATGGCCGGAAAAGGATTATTCCAGAGGCAGTTGGATTTCCTTCCAACCAGGACATGTCCAACCGTTCTCAGAATCAAGGTGTGGATTTTTCATCCCTGGATCAGCGAATGATCCTTGGAGAGAATGGAACAAGACCATCTTATAGTGCTAGCGGTAACTGTAATAATTGTGGAGTTAGGGAACGCTCTGGCATTACTGCAAGAACTAACATTAGTGAGAGTCTTGTAATCCAAAAAGCTTCAGCTGGTGCTGGCAGTGATGGAAGGTTGAGCATAGAACAGTCTGGATCTGTAGTTCCAGGCTCATTGGCCTCTTGCTCTTCACTTTCTATCCATGTATTCAATAAGAAAGACAATGAGGATTCTTTACCGGTCCGCCTTGAAGCAAAGCCTGTAGAACGTTCTGCAGGAGACATGATTGGGCTTGGTGGTGCTTTTTCAACAAAAGAAACTGAGATTACATGTACAAGAGGAACAGAAACTCTTTGGTCAGATCGCATCTCTGCCAAGGTGACTGTCTTGGCTGGTAATGCGAATTTCTGGGCAGTTGGCTGTGAAGATGGTTGCCTGCAGGTTTACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTTATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATATGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAG-CTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTGCTTATGGATGCGCAAAAGGCAATGTTTTTGGGGTTTTTTTAAAAAAAAAAAGGA]
[+] EMBL AK065913 [AGTTCGATTCGATTCGATTCGATTTCGTTTTCTCTCAGGAAGGAACACGAGCGGTTGGGTTCATCCCCCTCCTCGCCGTGTTCTTCGCTCCGCCGCCGGGCGCCGCCGGATCGGTCGCCCCACCCCCCCCCCGCCCCCTCCCTCCCGAAGCTTCTCGAACCTTCCTCCCCCCTACCAGGAGCCGTCCCGAGGCGGCCTAGGGTTCCCGCGGGCGGCCGCGCGATTTCTAGGGTTTTGGGTCCTTTGCTCGGGGCATGGGCCCTGCGGTTCGGCGGCAGTGACGAGCGGCAAGCCACCTAGAGGAGGAGATGATTACGGAGAAGCCGAGCTGGATTCGCCACGAGGGCCTGCAGATCTTCTCTATCGACATCCAGCCGGGCGGCATCCGCTTCGCCACCGGCGGCGGCGACCAGAAGATTCGCATATGGAGCATGAAATCAGTGGCCAAAGACAATGACAGTGATGATTCCAGCCAAAGGTTGCTGGCTACAATTCGAGACCATTTTGGAACAGTAAACTGTGTGAGATGGGCCCATCATGGCCGCTATCTTGCTTCAGGATCGGACGATCAAGTTATCCAAATTCATGAAAGAAAAGCTGGCACTGGAACATCTGAATTTGGAAGTGGAGAACCTCCAGATGTAGAAAACTGGAAGGTTGTTATGACCTTAAGAGGGCATACTGCCGATGTGGTTGACCTTAATTGGTCCCCTGATGACTCGACATTGGCTAGCGGCAGTTTGGATAATACTGTTCACATATGGAGCATGGCCAATGGCATATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTATCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTGACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGCTTGGTTCGACATTTTTTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGAAACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTCTGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTATTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTCAAAGTGTGGTTGATTTATCTTGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGGATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGGGATGCTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATATAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCAAAAAGGTTTCCAGTGTCCAGCAATTTCAATCACCCCCCCAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAGAAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAGTGAAACAAAGAGAATACCGGCGTCCTGATGGCCGGAAAAGGATTATTCCAGAGGCAGTTGGATTTCCTTCCAACCAGGACATGTCCAACCGTTCTCAGAATCAAGGTGTGGATTTTTCATCCCTGGATCAGCGAATGATCCTTGGAGAGAATGGAACAAGACCATCTTATAGTGCTAGCGGTAACTGTAATAATTGTGGAGTTAGGGAACGCTCTGGCATTACTGCAAGAACTAACATTAGTGAGAGTCTTGTAATCCAAAAAGCTTCAGCTGGTGCTGGCAGTGATGGAAGGTTGAGCATAGAACAGTCTGGATCTGTAGTTCCAGGCTCATTGGCCTCTTGCTCTTCACTTTCTATCCATGTATTCAATAAGAAAGACAATGAGGATTCTTTACCGGTCCGCCTTGAAGCAAAGCCTGTAGAACGTTCTGCAGGAGACATGATTGGGCTTGGTGGTGCTTTTTCAACAAAAGAAACTGAGATTACATGTACAAGAGGAACAGAAACTCTTTGGTCAGATCGCATCTCTGCCAAGGTGACTGTCTTGGCTGGTAATGCGAATTTCTGGGCAGTTGGCTGTGAAGATGGTTGCCTGCAGGTTTACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTTATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATATGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAG CTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTGCT ]
[+] EMBL CB641323 [ ATACTGTTCACATATGGAGCATGGCCAATGGCATATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTATCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTGACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGCTTGGTTCGACATTTTTTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGAAACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTCTGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAAGACCGAACTATT ]
[+] EMBL CF306387 [ TAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTATTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTCAAAGTGTGGTTGATTTATCTTGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGGATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGGGATGCTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATATAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCAAAAAGGTTTCCAGTGTCCAGCAATTTCAATCA CCCCCCAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAGAAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAG ]
[+] EMBL C28951 [ TAGCTG AANCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCATCAAGGTTTCCAGTGTCCAGCANTTTCANTCACCCCCCAAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAG AGAAAACTGCAGGTT CACTGCTGATGACATAAATAAAAGACCTCGTTTATCTAGTNCAGTG AACAAAGNG ATACCGGCGT CTGAT ]
[+] EMBL CB661014 [ TGCCTGCAGGTTTACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTTATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATATGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAG CTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCAGC ]
[+] EMBL AU197698 [ TGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAGCCTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTNTACTCAAGGTGGANAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGNGCAGAC ]
[+] EMBL CA767480 [ TACAGTAAAGGTTATATCTGCTAAATTTT AAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCGGCCTGAAATGCTGGCTAAGGATAG CTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTTATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGAGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCACCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTG ]
[+] EMBL AU032327 [ CAGTAAAGGTTATATCTGCTANATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTNGCCATGCTTNTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAG CTGANGATTGCTTTCCAGCATCAAATTTTGCTAGCNCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTNCAGACACGCTCCCATTTAGAGANCCAGCTGGCA CNTCATTGGCTTTGAAGTCTCCACAGGAAT TCGCCAATG ]
[-] EMBL CB661015 [ TCATGGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGAGGTGACACCAACACCACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTGCTTATGGATGCGCAAAAGGCAATGTTTTTGGGGTTTTTTTAAAAAAAAAAAGGA]
[+] EMBL AU182022 [ CACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACNCCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTGCTTATGGGTTCAAAAAAaaa ]
consensusID : consensus_12635#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 371 fasta sequence
[CACCACCNCCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTAAAAAAAAAA]
[+] EMBL AU184783 [CACCACCNCCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12635#0 AGTTCGATTCGATTCGATTCGATTTCGTTTTCTCTCAGGAAGGAACACGAGCGGTTGGGT 60
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TCATCCCCCTCCTCGCCGTGTTCTTCGCTCCGCCGCCGGGCGCCGCCGGATCGGTCGCCC 120
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CACCCCCCCCCCGCCCCCTCCCTCCCGAAGCTTCTCGAACCTTCCTCCCCCCTACCAGGA 180
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GCCGTCCCGAGGCGGCCTAGGGTTCCCGCGGGCGGCCGCGCGATTTCTAGGGTTTTGGGT 240
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CCTTTGCTCGGGGCATGGGCCCTGCGGTTCGGCGGCAGTGACGAGCGGCAAGCCACCTAG 300
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AGGAGGAGATGATTACGGAGAAGCCGAGCTGGATTCGCCACGAGGGCCTGCAGATCTTCT 360
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CTATCGACATCCAGCCGGGCGGCATCCGCTTCGCCACCGGCGGCGGCGACCAGAAGATTC 420
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GCATATGGAGCATGAAATCAGTGGCCAAAGACAATGACAGTGATGATTCCAGCCAAAGGT 480
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TGCTGGCTACAATTCGAGACCATTTTGGAACAGTAAACTGTGTGAGATGGGCCCATCATG 540
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GCCGCTATCTTGCTTCAGGATCGGACGATCAAGTTATCCAAATTCATGAAAGAAAAGCTG 600
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GCACTGGAACATCTGAATTTGGAAGTGGAGAACCTCCAGATGTAGAAAACTGGAAGGTTG 660
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TTATGACCTTAAGAGGGCATACTGCCGATGTGGTTGACCTTAATTGGTCCCCTGATGACT 720
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CGACATTGGCTAGCGGCAGTTTGGATAATACTGTTCACATATGGAGCATGGCCAATGGCA 780
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTA 840
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTG 900
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 ACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGCTTGGTTCGACATTTT 960
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGA 1020
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTC 1080
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATT 1140
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAG 1200
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTA 1260
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTC 1320
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AAAGTGTGGTTGATTTATCTTGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGG 1380
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 ATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGGGATG 1440
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATA 1500
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCA 1560
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AAAAGGTTTCCAGTGTCCAGCAATTTCAATCACCCCCCCAAAGTTTCTACAGATGCACCT 1620
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAG 1680
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAGTG 1740
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AAACAAAGAGAATACCGGCGTCCTGATGGCCGGAAAAGGATTATTCCAGAGGCAGTTGGA 1800
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TTTCCTTCCAACCAGGACATGTCCAACCGTTCTCAGAATCAAGGTGTGGATTTTTCATCC 1860
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CTGGATCAGCGAATGATCCTTGGAGAGAATGGAACAAGACCATCTTATAGTGCTAGCGGT 1920
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AACTGTAATAATTGTGGAGTTAGGGAACGCTCTGGCATTACTGCAAGAACTAACATTAGT 1980
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GAGAGTCTTGTAATCCAAAAAGCTTCAGCTGGTGCTGGCAGTGATGGAAGGTTGAGCATA 2040
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GAACAGTCTGGATCTGTAGTTCCAGGCTCATTGGCCTCTTGCTCTTCACTTTCTATCCAT 2100
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GTATTCAATAAGAAAGACAATGAGGATTCTTTACCGGTCCGCCTTGAAGCAAAGCCTGTA 2160
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GAACGTTCTGCAGGAGACATGATTGGGCTTGGTGGTGCTTTTTCAACAAAAGAAACTGAG 2220
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 ATTACATGTACAAGAGGAACAGAAACTCTTTGGTCAGATCGCATCTCTGCCAAGGTGACT 2280
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GTCTTGGCTGGTAATGCGAATTTCTGGGCAGTTGGCTGTGAAGATGGTTGCCTGCAGGTT 2340
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTT 2400
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 ATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATA 2460
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCT 2520
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCA 2580
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGC 2640
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CTGAAATGCTGGCTAAGGATAGCTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCA 2700
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATG 2760
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTA 2820
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTC 2880
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 TTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGT 2940
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 GAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAA 3000
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 AATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGAT 3060
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 ATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGAC 3120
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACA 3180
consensus_12635#1 ------------------------------------------------------------
consensus_12635#0 CCACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAG 3240
consensus_12635#1 -------CACCACCNCCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAG 53
******* *********************************************
consensus_12635#0 TTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTG 3300
consensus_12635#1 TTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTG 113
************************************************************
consensus_12635#0 CATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTA 3360
consensus_12635#1 CATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTA 173
************************************************************
consensus_12635#0 GCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAA 3420
consensus_12635#1 GCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAA 233
************************************************************
consensus_12635#0 CAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGG 3480
consensus_12635#1 CAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGG 293
************************************************************
consensus_12635#0 CCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATG 3540
consensus_12635#1 CCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATG 353
************************************************************
consensus_12635#0 TCCTTTTTGCTTATGGATGCGCAAAAGGCAATGTTTTTGGGGTTTTTTTAAAAAAAAAAA 3600
consensus_12635#1 TCCTTTTTAAAAAAAAAA------------------------------------------ 371
******** * *
consensus_12635#0 GGA 3603
consensus_12635#1 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||