cluster # 12642

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Oryza sativa
cluster # 12642 cluster # 12642 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12642#0 length = 1285 sequences # 9

consensus_12642#1 length = 492 sequences # 1
consensus_12642#2 length = 381 sequences # 1

consensusID : consensus_12642#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1285
fasta sequence

                              [CTTCCTTCCTCCCTCCGTCGCCGCCTTCT-CTTCTCTTCTCTTCTCTTCCCCCGCGAGGCCGCGACGCACTCGGTCGCCGCCGGATCTCGACCCCCCTCCGCTCGCCGACTTCGCCTCCTCCCCCCCGGATCTCCACTCGCACCCAACGGATCTCTCCCTCCTCCGCCTTCTCCGCCGCCACTG-GGACGCATATAGGTCCATAGGG-G-AGAAGATCCATATGAGTTTGTTGTGCTATGAAAAGGGGCAAAAACTGCGCAGCAAGAAATTATGGGCAAAATTAACAATAGAAGAAACAGTATATTCTTTCAGTCCTGAC-TCCTGAGTTGATTTAGGAACATCACATATAGTGAGAAGGTGGCACATTTTCCATGGATAAGGCTGGAGGCAATCAGGGAGGCAAGGTGTTGAAGAAAGGGAAAAAGAAGCATGCAAAAGATGAGCTGGATCGCCAAAAGCAAGCGGAGAAGAAAAGGCGCCGGTTAGAGAAAGCACTTGCAAACTCGGCTGCTATTATTTCAGAACTGGAGAAGAAACGGCAGCAGAAAAGGGAAGAGCAACAGAGGCTAGATGAT-GAAGGTGCTG-CAA-TAGCTGAAGCAGTGGCTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACCTTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAGGAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAATTGAGATGGACCAATTGGGG-CATGTCCCAGACATTTTCAT-CATGGGAGCAATTGACGGATTGTGAAG-CACCACTCTATCAAGAAG-CACTTGCTCAGTCAGATATCCACCCTGGCCCTATAGCCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCATTTACCATCCAAGGAGAAGCAGTAGCGGCAGCATCTTCAGCCACTGAGTCTGAAAGTGGTCAGTGGAACCAACAATAGGCTGAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACATAAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAAGTTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACAAAAATGTTTGGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTATTTGATTGAAAGTGTTTGTGGTGTAAACTGCATTTTTA]

[+] EMBL AK067326             [CTTCCTTCCTCCCTCCGTCGCCGCCTTCT CTTCTCTTCTCTTCTCTTCCCCCGCGAGGCCGCGACGCACTCGGTCGCCGCCGGATCTCGACCCCCATCCGCTCGCCGACTTCGCCTCCTCCCCCCCGGATCTCCACTCGCACCCAACGGATCTCTCCCTCCTCCGCCTTCTCCGCCGCCACTG GGACGCATATAGGTCCATAGGG G AGAAGATCCATATGAGTTTGTTGTGCTATGAAAAGGGGCAAAAACTGCGCAGCAAGAAATTATGGGCAAAATTAACAATAGAAGAAACAGTATATTCTTTCAGTCCTGAC TCCTGAGTTGATTTAGGAACATCACATATAGTGAGAAGGTGGCACATTTTCCATGGATAAGGCTGGAGGCAATCAGGGAGGCAAGGTGTTGAAGAAAGGGAAAAAGAAGCATGCAAAAGATGAGCTGGATCGCCAAAAGCAAGCGGAGAAGAAAAGGCGCCGGTTAGAGAAAGCACTTGCAAACTCGGCTGCTATTATTTCAGAACTGGAGAAGAAACGGCAGCAGAAAAGGGAAGAGCAACAGAGGCTAGATGAT GAAGGTGCTG CAA TAGCTGAAGCAGTGGCTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACCTTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAGGAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAATTGAGATGGACCAATTGGGG CATGTCCCAGACATTTTCAT CATGGGAGCAATTGACGGATTGTGAAG CACCACTCTATCAAGAAG CACTTGCTCAGTCAGATATCCACCCTGGCCCTATAGCCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCATTTACCATCCAAGGAGAAGCAGTAGCGGCAGCATCTTCAGCCACTGAGTCTGAAAGTGGTCAGTGGAACCAACAATAGGCTGAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACATAAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAAGTTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACAAAAATGTTTGGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTATTTGATTGAAAGTGT                       ]
[+] EMBL CF280653             [           CCTCCGTCGCCGCCTTCTAATTCTCTTCTCTTCTCTTCCCCCGCGAGGCCGCGACGCACTCGGTCGCCGCCGGATCTCGACCCCCCTCCGCTCGCCGACTTCGCCTCCTCCCCCCCGGATCTCCACTCGCACCCAACGGATCTCTCCCTCTTTCTTCTTCTCCGCCGCCACTG GGACGCATATAGGTCCATAGGGTGTTTATTATCCATATGAGTTTGTTGTGCTATGAAAAGGGGCAAAAACTGCGCAGCAAGAAATTATGGGCAAAATTAACAATAGAAGAAACAGTATATTCTTTCAGTCCTGAC TCCTGAGTTGATTTAGGAACATCACATATAGTGAGAAGGTGGCACATTTTCCATGGATAAGGCTGGAGGCAATCAGGGAGGCAAGGTGTTGAAGAAAGGGAAAAAGAAGCATGCGAAAGATGAGCTGGATCGCCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C96691               [                              CTTCTCTTCTCTTCTCTCCNCNNGCGAGGCCGCGACGCACTCGGTCGCCGCCGGATCTCGANCCCCCTCCGCTCGCCGACTTCGCCTCCTCCCCCCCGGATCTCCACTCGCACCCAACGGATCTCTCCCTCCTCCGCCTTCTCCGCCGCCACTG GGACGCATATAGGTCCATAGGG G AGAAGATCCATATGAGTTTGTTGTGCTATGAAAAGGGGCAAAAACTGCGCA CAAGAAATTATGGGCAAAATTAACAATAGAAGAAACAGTATATTCTTTCAGTCCTGACTTCCTGAGTTGATTTAGGAACATCACATATAGTGAGAAGGTGGCACA TTTCCATGGATAAGGCTGGANGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB658277             [                                               TCCCCCGCGAGGCCGCGACGCACTCGGTCGCCGCCGGATCTCGACCCCCCTCCGCTCGCCGACTTCGCCTCCTCCCCCCCGGATCTCCACTCGCACCCAACGGATCTCTCCCTCCTCCGCCTTCTCCGCCGCCACTG GGACGCATATAGGTCCATAGGG G AGAAGATCCATATGAGTTTGTTGTGCTATGAAAAGGGGCAAAAACTGCGCAGCAAGAAATTATGGGCAAAATTAACAATAGAAGAAACAGTATATTCTTTCAGTCCTGAC TCCTGAGTTGATTTAGGAACATCACATATAGTGAGAAGGTGGCACATTTTCCATGGATAAGGCTGGAGGCAATCAGGGAGGCAAGGTGTTGAAGAAAGGGAAAAAGAAGCATGCAAAAGATGAGCTGGATCGCCAAAAGCAAGCGGAGAAGAAAAGGCGCCGGTTAGAGAAAGCACTTGCAAACTCGGCTGCTATTATTTCAGAACTGGAGAAGAAACGGCAGCAGAAAAGGGAAGAGCAACAGAGGCTAGATGAT GAAGGTGCTG CAA TAGCTGAAGCAGTGGCTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGGTGAACAACCTTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAGGAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCGCATTGAGATGGACCAATTGGGG CATGTCCCAGACATTTTCAT CATGGGAGCAATTGACGGATTGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF295087             [                                                CCCCCGCGAGGCCGCGACGCACTCGGTCGCCGCCGGATCTCGACCCCCCTCCGCTCGCCGACTTTTCCTCCTCCCCCCCGGATCTCCACTCGCACCCAACGGATCTCTCCCTCTTTCTCCTTCTCCGCCGCCACTGTTGACGCATATAGGTCCATAGGG G TTTTTATCCATATGAGTTTGTTGTGCTATGAAAGGGGGCAAAAACTGCGCAGCAAGAAATTATGGGCAAAATTAACAATAGAAGAAACAGTATATTCTTTCAGTCCTGAC TCCTGAGTTGATTTAGGAACATCACATATAGTGAGAAGGTGGCACATTTTCCATGGATAAGGCTGGAGGCAATCAGGGAGGCAAGGTGTTGAAGAAAGGGAAAAAGAGGCATGCAAAAGATGAGCTGGATCGCCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB652079             [                                                                            GCCGCCCCCTCTCGACCCCCCTCCGCTCGCCGACTTCGCCTCCTCCCCCCCGGATCTCCACTCGCACCCAACGGATCTCTCCCTCCTCCGCCTTCTCCGCCGCCACTG GGACGCATATAGGTCCATAGGG G AGAAGATCCATATGAGTTTGTTGTGCTATGAAAAGGGGCAAAAACTGCGCAGCAAGAAATTATGGGCAAAATTAACAATAGAAGAAACAGTATATTCTTTCAGTCCTGAC TCCTGAGTTGATTTAGGAACATCACATATAGTGAGAAGGTGGCACATTTTCCATGGATAAGGCTGGAGGCAATCAGGGAGGCAAGGTGTTGAAGAAAGGGAAAAAGAAGCATGCAAAAGATGAGCTGGATCGCCAAAAGCAAGCGGAGAAGAAAAGGCGCCGGTTAGAGAAAGCACTTGCAAACTCGGCTGCTATTATTTCAGAACTGGAGAAGAAACGGCAGCAGAAAAGGGAAGAGCAACAGAGGCTAGATGAT GAAGGTGCTG CAA TAGCTGAAGCAGTGGCTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACCTTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAGGAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAATTGAGATGGACCAATTGGGG CATGTCCCAGACATTTTCAT CATGGGAGCTATTGACGGATTGTGAAG CACCACTCTATCAAGAAG CAC                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB658278             [                                                                                                                                                                                                                                                                                                                                                                                                                                            AGCATGCAAAAGATGAGCTGGATCGCCAAAAGCAAGCGGAGAAGAAAAGGCGCCGGTTAGAGAAAGCACTTGCAAACTCGGCTGCTATTATTTCAGAACTGGAGAAGAAACGGCAGCAGAAAAGGGAAGAGCAACAGAGGCTAGATGAT GAAGGTGCTG CAA TAGCTGAAGCAGTGGCTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACCTTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAGGAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAATTGAGATGGACCAATTGGGG CATGTCCCAGACATTTTCAT CATGGGAGCAATTGACGGATTGTGAAG CACCACTCTATCAAGAAG CACTTGCTCAGTCAGATATCCACCCTGGCCCTATAGCCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCATTTACCATCCAAGGAGAAGCAGTAGCGGCAGCATCTTCAGCCACTGAGTCTGAAAGTGGTCAGTGGAACCAACAATAGGCTGAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACATAAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAAGTTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACAAAAATGTTTGGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTATTTGATGGAAAGTGTTTGTGGTGTAAACTGCATTTTTA]
[+] EMBL C96692               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gngcCANCAGAGGCTAGATGATGGAAGGTGCTGCCAATTAGCTGAAGCAGTGGCTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACCTTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAGGAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAATTGAGATGGACCAATTGGGGCCATGTCCCAGACATTTTCATCCATGGGAGCAATTGACGGATTGTGAAGCCACCACTCTATCAAGAAGCCACTTGCTCAGTCAGATATCCACCCTGGCCCTATAGCCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCATTTACCATCCAAGGAGAAGCAGTAGCGGCAGCATCTTCAGCCACTGAGTCTGAAAGTGGTCAGTGGAACCAACAATAGGCTGAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACATAAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAAGTTTGGTATAGGAAAaa                                                                                                                                 ]
[-] EMBL CF295086             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATGTCCCAGACATTTTCAT CATGGGAGCAATTGACGGATTGTGAAG CACCACTCTATCAAGAAG CACTTGCTCAGTCAGATATCCACCCTGGCCCTATAGCCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCATTTACCATCCAAAGAGAAGCAGTAGCGGCAGCATCTTCAGCCACTGAGTTTGAAAGTGGTCAGTGGAACCAACAATAGGCTGAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACATAAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAAGTTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACAAAAATGTTTGGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTATTTGATTGAAAGTGTTTGTGGTGTAAAaaa        ]




>consensus_12642#0
CTTCCTTCCTCCCTCCGTCGCCGCCTTCTCTTCTCTTCTCTTCTCTTCCCCCGCGAGGCC
GCGACGCACTCGGTCGCCGCCGGATCTCGACCCCCCTCCGCTCGCCGACTTCGCCTCCTC
CCCCCCGGATCTCCACTCGCACCCAACGGATCTCTCCCTCCTCCGCCTTCTCCGCCGCCA
CTGGGACGCATATAGGTCCATAGGGGAGAAGATCCATATGAGTTTGTTGTGCTATGAAAA
GGGGCAAAAACTGCGCAGCAAGAAATTATGGGCAAAATTAACAATAGAAGAAACAGTATA
TTCTTTCAGTCCTGACTCCTGAGTTGATTTAGGAACATCACATATAGTGAGAAGGTGGCA
CATTTTCCATGGATAAGGCTGGAGGCAATCAGGGAGGCAAGGTGTTGAAGAAAGGGAAAA
AGAAGCATGCAAAAGATGAGCTGGATCGCCAAAAGCAAGCGGAGAAGAAAAGGCGCCGGT
TAGAGAAAGCACTTGCAAACTCGGCTGCTATTATTTCAGAACTGGAGAAGAAACGGCAGC
AGAAAAGGGAAGAGCAACAGAGGCTAGATGATGAAGGTGCTGCAATAGCTGAAGCAGTGG
CTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACC
TTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAG
GAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAAT
TGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAATTGACGGATT
GTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTGGCCCTATAG
CCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCATTTACCATCCAAGGAGAAGCAG
TAGCGGCAGCATCTTCAGCCACTGAGTCTGAAAGTGGTCAGTGGAACCAACAATAGGCTG
AACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACATA
AGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAAG
TTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACAAAAATGTTT
GGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTATTTGATTGAAAGT
GTTTGTGGTGTAAACTGCATTTTTA

consensusID : consensus_12642#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 492
fasta sequence

                              [TTCCCCAATTGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAATTGACGGATTGTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTGGCCCTATAGCCATTGTTTCACCATTGCAGAAGAGGAGGGAGGATCCATTTACCATCCAAGGAGAAGCAGTAGCGGCAGCATTTTCAGCCACTGAGTTTGAAAGTGGTCAGTGGAACCAACAATAGGCTGAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACATAAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAAGTTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACAAAAATGTTTGGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTAAAAAAAAAAAAAAAAA]

[-] EMBL CF280652             [TTCCCCAATTGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAATTGACGGATTGTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTGGCCCTATAGCCATTGTTTCACCATTGCAGAAGAGGAGGGAGGATCCATTTACCATCCAAGGAGAAGCAGTAGCGGCAGCATTTTCAGCCACTGAGTTTGAAAGTGGTCAGTGGAACCAACAATAGGCTGAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACATAAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAAGTTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACAAAAATGTTTGGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTAAAAAAAAAAAAAAAAA]




>consensus_12642#1
TTCCCCAATTGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAAT
TGACGGATTGTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTG
GCCCTATAGCCATTGTTTCACCATTGCAGAAGAGGAGGGAGGATCCATTTACCATCCAAG
GAGAAGCAGTAGCGGCAGCATTTTCAGCCACTGAGTTTGAAAGTGGTCAGTGGAACCAAC
AATAGGCTGAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGT
AGTCACATAAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAG
AAACCAAAGTTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACA
AAAATGTTTGGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTAAAAA
AAAAAAAAAAAA

consensusID : consensus_12642#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 381
fasta sequence

                              [GATNGGCTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACCTTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAGGAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAATTGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAATTGACGGATTGTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTGGCCCTATAGCCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCCATTTACCATCCAAGGAGGAGCAATAGCTGAGTCTGAA]

[+] EMBL OSC21271             [GATNGGCTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACCTTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAGGAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAATTGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAATTGACGGATTGTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTGGCCCTATAGCCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCCATTTACCATCCAAGGAGGAGCAATAGCTGAGTCTGAA]




>consensus_12642#2
GATNGGCTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGA
ACAACCTTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATT
CACAAGGAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTC
CCCAATTGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAATTGA
CGGATTGTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTGGCC
CTATAGCCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCCATTTACCATCCAAGGA
GGAGCAATAGCTGAGTCTGAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12642#0      CTTCCTTCCTCCCTCCGTCGCCGCCTTCTCTTCTCTTCTCTTCTCTTCCCCCGCGAGGCC 60
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      GCGACGCACTCGGTCGCCGCCGGATCTCGACCCCCCTCCGCTCGCCGACTTCGCCTCCTC 120
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      CCCCCCGGATCTCCACTCGCACCCAACGGATCTCTCCCTCCTCCGCCTTCTCCGCCGCCA 180
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      CTGGGACGCATATAGGTCCATAGGGGAGAAGATCCATATGAGTTTGTTGTGCTATGAAAA 240
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      GGGGCAAAAACTGCGCAGCAAGAAATTATGGGCAAAATTAACAATAGAAGAAACAGTATA 300
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      TTCTTTCAGTCCTGACTCCTGAGTTGATTTAGGAACATCACATATAGTGAGAAGGTGGCA 360
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      CATTTTCCATGGATAAGGCTGGAGGCAATCAGGGAGGCAAGGTGTTGAAGAAAGGGAAAA 420
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      AGAAGCATGCAAAAGATGAGCTGGATCGCCAAAAGCAAGCGGAGAAGAAAAGGCGCCGGT 480
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      TAGAGAAAGCACTTGCAAACTCGGCTGCTATTATTTCAGAACTGGAGAAGAAACGGCAGC 540
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      AGAAAAGGGAAGAGCAACAGAGGCTAGATGATGAAGGTGCTGCAATAGCTGAAGCAGTGG 600
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      ------------------------------------------------------GATNGG 6
                                                                                   

consensus_12642#0      CTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACC 660
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      CTCTTCATGTTCTCATAGACGAAGACTCCGAGGAACCCTGCCATTTGATGTTGAACAACC 66
                                                                                   

consensus_12642#0      TTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAG 720
consensus_12642#1      ------------------------------------------------------------
consensus_12642#2      TTAGAATATGCAACCACTGGGAGGATTTTGTGGGCTTTGGATTTGCTCCAGATTCACAAG 126
                                                                                   

consensus_12642#0      GAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAAT 780
consensus_12642#1      ---------------------------------------------------TTCCCCAAT 9
consensus_12642#2      GAGTAGATGCTTATCCTTCTGGCAAACCAACAAGTGTCTCTCATGCTTATGTTCCCCAAT 186
                                                                          *********

consensus_12642#0      TGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAATTGACGGATT 840
consensus_12642#1      TGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAATTGACGGATT 69
consensus_12642#2      TGAGATGGACCAATTGGGGCATGTCCCAGACATTTTCATCATGGGAGCAATTGACGGATT 246
                       ************************************************************

consensus_12642#0      GTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTGGCCCTATAG 900
consensus_12642#1      GTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTGGCCCTATAG 129
consensus_12642#2      GTGAAGCACCACTCTATCAAGAAGCACTTGCTCAGTCAGATATCCACCCTGGCCCTATAG 306
                       ************************************************************

consensus_12642#0      CCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCC-ATTTACCATCCAAGGAGAAGCA 959
consensus_12642#1      CCATTGTTTCACCATTGCAGAAGAGGAGGGAGGATCC-ATTTACCATCCAAGGAGAAGCA 188
consensus_12642#2      CCATTGTCTCACCATTGCAGAAGAGGAGGGAGGATCCCATTTACCATCCAAGGAGGAGCA 366
                       ******* ***************************** ***************** ****

consensus_12642#0      GTAGCGGCAGCATCTTCAGCCACTGAGTCTGAAAGTGGTCAGTGGAACCAACAATAGGCT 1019
consensus_12642#1      GTAGCGGCAGCATTTTCAGCCACTGAGTTTGAAAGTGGTCAGTGGAACCAACAATAGGCT 248
consensus_12642#2      ATAGCTG----AGTCTGAA----------------------------------------- 381
                        **** *    *   * *                                          

consensus_12642#0      GAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACAT 1079
consensus_12642#1      GAACAGAAATACAGAGAGGATTATAAACATACCAAATGCATAATCTGTATGTAGTCACAT 308
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      AAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAA 1139
consensus_12642#1      AAGATGCATCTTTTTATCAGAGTGATACTTAGTTTTTTTTTCTTTTCTTTAGAAACCAAA 368
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      GTTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACAAAAATGTT 1199
consensus_12642#1      GTTTGGTATAGGAAAGCCATTTTTACTGTTGCATGTTACGAGTTCAAAGACAAAAATGTT 428
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      TGGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTATTTGATTGAAAG 1259
consensus_12642#1      TGGTGTCAGTTAATTATATAGGTGTTGTAATGGGCCCTCCTTGCCTTAAAAAAAAAAAAA 488
consensus_12642#2      ------------------------------------------------------------
                                                                                   

consensus_12642#0      TGTTTGTGGTGTAAACTGCATTTTTA 1285
consensus_12642#1      AAAA---------------------- 492
consensus_12642#2      --------------------------