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Oryza sativa
cluster # 12646 cluster # 12646       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12646#0 length = 2144 sequences # 5  
consensus_12646#1 length = 2127 sequences # 5  
consensus_12646#2 length = 954 sequences # 1  

consensusID : consensus_12646#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2144
fasta sequence
                              [CTGCGGCAAGCGCTTTTTTGACCGCTTCTGCCGTCTCCCTCCTCACACGGCACCCGGCTCGCGTCTCTCCTCCCCCCTACTACTCTGATCCACCGGGTAGTACTAGACGCGCTACTACTGCCGCTGTACTGCTCTGCCACCACTTCTCCACTCCACTCCACTCTCCTCTACTACCACCGCCGCTCTCGTCTCGTCTCGTCTCGACTCGACTCGCATTGCGCCTGTGCTGTGCTGTGGTGGTGGCCGCGCGGGGGGCGAGATGGCCGGAGGAGGTGGGGGAGGGGGAGGGGCGGCGCCGGCGCCGAAGCACGACGAGCTGACGCCGCACCCCGTCAAGGACCAGCTCCCCGGCGTCTCCTACTGCATCACCAGCCCTCCTCCGTGGCCTGAGGCCATTCTTCTTGGTTTCCAACATTATCTGGTTATGCTGGGAACTACAGTTATCATACCAACTGCACTCGTTCCGCAGATGGGAGGAAACAATGAGGACAAGGCTGTTGTTATCCAAACATTGCTGTTTGTGGCTGGGATTAACACCCTTTTGCAGAGTTTCTTTGGAACCAGATTACCTGCGGTGATTGGTGGATCATACACATTTGTTGTACCAACCATCTCAATCATCCTTGCTGGTCGTTATGCCAACGAACCAAATCCACACACAAAATTCCTCCGAATCATGCGTGGAACACAAGGTGCATTGATCGTGGCTTCTGCTCTACAAATCATATTTGGTTTCAGTGGCCTTTGGCGTAATGTTGCAAGGTATCTGAGTCCATTGTCAGCTGCTCCACTGGTGATGCTAGTCGGCTTTGGACTTTATGAGCTTGGTTTTCCCTCGGTTGCCAAGTGTGTTGAGATTGGTCTTCCAGAACTTATCCTCCTGGTGATCTTCGCAATGTACCTGCCTCATGCTATACACATGATGAAGTCTATCTTCGACCGTTTTGCTGTTCTGTTCACTATTCCTATAGTGTGGCTCTATGCATATCTGCTCACAGTTGGAGGCGCGTACAGGAATGCACCACCAAAGACCCAGTTTCATTGCCGAACTGACCGTTCTGGAATAATTGGTGGTGCTCCTTGGATAAGAGTTCCCTATCCCTTTCAATGGGGTGCTCCAACTTTTGATGCTGGTGAAGCTTTTGCAATGATGGCTGCTTCATTTGTTGCTCTGGTGGAGTCTACTGGTGCTTTCATTGCTGTTTCAAGGTATGCTAGTGCCACACCTCTCCCACCCTCTGTACTTAGCCGTGGAATTGGTTGGCAGGGCATTGGCATTTTGTTGGATGGGCTATTTGGGACTGGAAATGGTTCTTCTGTATCAGTTGAAAATGCTGGATTGCTAGCTTTGACACGTGTTGGTAGCCGAAGAGTGGTGCAGATATCAGCTGGTTTCATGATATTCTTCTCTATTCTGGGAAAATTTGGAGCTGTCTTTGCATCAATACCTCCGCCGATCTTTGCAGCTCTCTATTGTATCTTCTTTGCATATGTCGGTTCTGCTGGGGTTGGTTTCCTTCAGTTCTGCAATCTCAATAGTTTCAGGACCAAGTTCATCCTCGGGTTCTCAGTTTTTATGGGCCTTTCTGTTCCTCAGTACTTCAA-CGAGTACACA-TCTGTTGCTGGTTATGGTCCTGTTCATACACACTCAAGATGGTTCAATGACATCGTGAATGTCATATTCTCGTCAAAGGCATTCGTTGCTGGCTTTGTTGCATATTTGCTGGACAACACGATTCACAG-GCATGATAGT-TCTGTCAGAAAAGATCGAGGACACCATTGGTGGGATAAATTCCGATCA-TACAGG-ACTGACACAAGAAGCGAGGAGTTCTATTCCCTGCCGTTCAACCTGAACAAGTT-CTTCCCATCAGTAT-GAGCATACCGTGGCTAATGCAAGAGTAGGTTACT-GTGTACTGTCTGT-CCCTT-ATGAACAGGTT-CCCT-GGAAGTGGCAAACTGTTGGCCT-GAATTCTCT-AGGTATGTGGAAATCGT-AGACCTTTAAACAAAAGGGAATCCTGTGGTATGAACAAAAAAATATTGGTGGAATTATGGCA-CGGATGTATATTTTAACCTATCTGGGGGCAATAGTAGGAAATTTTGGCTACTCATTTGCACATGAAAAAAGCTCTTGATTCTTAAAAAAAAAA]

[+] EMBL AK073562             [CTGCGGCAAGCGCTTTTTTGACCGCTTCTGCCGTCTCCCTCCTCACACGGCACCCGGCTCGCGTCTCTCCTCCCCCCTACTACTCTGATCCACCGGGTAGTACTAGACGCGCTACTACTGCCGCTGTACTGCTCTGCCACCACTTCTCCACTCCACTCCACTCTCCTCTACTACCACCGCCGCTCTCGTCTCGTCTCGTCTCGACTCGACTCGCATTGCGCCTGTGCTGTGCTGTGGTGGTGGCCGCGCGGGGGGCGAGATGGCCGGAGGAGGTGGGGGAGGGGGAGGGGCGGCGCCGGCGCCGAAGCACGACGAGCTGACGCCGCACCCCGTCAAGGACCAGCTCCCCGGCGTCTCCTACTGCATCACCAGCCCTCCTCCGTGGCCTGAGGCCATTCTTCTTGGTTTCCAACATTATCTGGTTATGCTGGGAACTACAGTTATCATACCAACTGCACTCGTTCCGCAGATGGGAGGAAACAATGAGGACAAGGCTGTTGTTATCCAAACATTGCTGTTTGTGGCTGGGATTAACACCCTTTTGCAGAGTTTCTTTGGAACCAGATTACCTGCGGTGATTGGTGGATCATACACATTTGTTGTACCAACCATCTCAATCATCCTTGCTGGTCGTTATGCCAACGAACCAAATCCACACACAAAATTCCTCCGAATCATGCGTGGAACACAAGGTGCATTGATCGTGGCTTCTGCTCTACAAATCATATTTGGTTTCAGTGGCCTTTGGCGTAATGTTGCAAGGTATCTGAGTCCATTGTCAGCTGCTCCACTGGTGATGCTAGTCGGCTTTGGACTTTATGAGCTTGGTTTTCCCTCGGTTGCCAAGTGTGTTGAGATTGGTCTTCCAGAACTTATCCTCCTGGTGATCTTCGCAATGTACCTGCCTCATGCTATACACATGATGAAGTCTATCTTCGACCGTTTTGCTGTTCTGTTCACTATTCCTATAGTGTGGCTCTATGCATATCTGCTCACAGTTGGAGGCGCGTACAGGAATGCACCACCAAAGACCCAGTTTCATTGCCGAACTGACCGTTCTGGAATAATTGGTGGTGCTCCTTGGATAAGAGTTCCCTATCCCTTTCAATGGGGTGCTCCAACTTTTGATGCTGGTGAAGCTTTTGCAATGATGGCTGCTTCATTTGTTGCTCTGGTGGAGTCTACTGGTGCTTTCATTGCTGTTTCAAGGTATGCTAGTGCCACACCTCTCCCACCCTCTGTACTTAGCCGTGGAATTGGTTGGCAGGGCATTGGCATTTTGTTGGATGGGCTATTTGGGACTGGAAATGGTTCTTCTGTATCAGTTGAAAATGCTGGATTGCTAGCTTTGACACGTGTTGGTAGCCGAAGAGTGGTGCAGATATCAGCTGGTTTCATGATATTCTTCTCTATTCTGGGAAAATTTGGAGCTGTCTTTGCATCAATACCTCCGCCGATCTTTGCAGCTCTCTATTGTATCTTCTTTGCATATGTCGGTTCTGCTGGGGTTGGTTTCCTTCAGTTCTGCAATCTCAATAGTTTCAGGACCAAGTTCATCCTCGGGTTCTCAGTTTTTATGGGCCTTTCTGTTCCTCAGTACTTCAA CGAGTACACA TCTGTTGCTGGTTATGGTCCTGTTCATACACACTCAAGATGGTTCAATGACATCGTGAATGTCATATTCTCGTCAAAGGCATTCGTTGCTGGCTTTGTTGCATATTTGCTGGACAACACGATTCACAG GCATGATAGT TCTGTCAGAAAAGATCGAGGACACCATTGGTGGGATAAATTCCGATCA TACAGG ACTGACACAAGAAGCGAGGAGTTCTATTCCCTGCCGTTCAACCTGAACAAGTT CTTCCCATCAGTAT GAGCATACCGTGGCTAATGCAAGAGTAGGTTACT GTGTACTGTCTGT CCCTT ATGAACAGGTT CCCT GGAAGTGGCAAACTGTTGGCCT GAATTCTCT AGGTATGTGGAAATCGT AGACCTTTAAACAAAAGGGAATCCTGTGGTATGAACAAAAAAATATTGGTGGAATTATGGCA CGGATGTATATTTTAACCTATCTGGGGGCAATAGTAGGAAATTTTGGCTACTCAT                                      ]
[+] EMBL AU092909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCAAGTTCATCCTCGGGTTCTCAGTTTTTATGGGCCTTTCTGTTCCTCAGTACTTCAA CGAGTACACA TCTGTTGCTGGTTATGGTCCTGTTCATACACACTCAAGATGGTTCAATGACATCGTGAATGTCATATTCTCGTCAAAGGCATTCGTTGCTGGCTTTGTTGCATATTTGCTGGACAACACGATTCACAG GCATGATAGT TCTGTCAGAAAAGATCGAGGACACCATTGGTGGGATAAATTCCGATCA TACAGG ACTGACACAAGAAGCGAGGAGTTCTATTCCCTGCCGTTCAACCTGAACAAGTT CTTCCCATCAGTAT GAGCATACCGTGGCTAATGCAAGAGTAGGTTACT GTGTACTGTCTGT CCCTT ATGAACAGGTT CCCT GGAAGTGGCAAACTGTTGGCCT GAATTCTCT AGGTATGTGGAAATCGT AGACCTTTAAACAAAAGGGAATCCTGTGGTATGAACAAAAAAATATTGGTGGAATTATGGCA CGGATGTATATTTTAACCTATCTGGGGGCAATAGTAGGAAATTTTGGCTAaaaaaa                                     ]
[+] EMBL BI806760             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCCCTTCTGTTCCTCAGTACTTCAACCGAGTACACATTCTGTTGCTGGTTATGG CC  TTCATACACACTCAAGATGGTTCAATGACATCGTGAATGTCATATTCTCGTCAAAGGCATTCGTTGCTGGCTTTGTTGCATATTTGCTGGACAACACGATTCACAG GCATGATAGT TCTGTCAGAAAAGATCGAGGACACCATTGGTGGGATAAATTCCGATCA TACAGG ACTGACACAAGAAGCGAGGAGTTCTATTCCCTGCCGTTCAACCTGAACAAGTT CTTCCCATCAGTAT GAGCATACCGTGGCTAATGCAAGAGTAGGTTACT GTGTACTGTCTGT CCCTT ATGAACAGGTT CCCT GGAAGTGGCAAACTGTTGGCCT GAATTCTCT AGGTATGTGGAAATCGT AGACCTTTAAAC AAAGGGAATCCTGTGGTATGAACAAAAAAATATTGGTGGAATTATGGCA CGGATGTATATTTTAACCTATCTGGGGGC ATAGTAGGAAATTTTGGCTACTCATTTGCACATGAAAAAA                       ]
[+] EMBL BI805186             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTCACAGCGCATGATAGTGTCTGTCAGAAAAGATCGAGGACACCATTGGTGGGATAAATTCCGATCA TACAGG ACTGACACAAGAAGCGAGGAGTTCTATTCCCTGCCGTTCAACCTGAACAAGTT CTTCCCATCAGTAT GAGCATACCGTGGCTAATGCCAGAGTAGGTTACT GTGTACTGTCTGT CCCTT ATGAACAGGTT CCCT GGAAGTGGCAAACTGTTGGCCT GAATTCTCT AGGTATGTGGAAATCGT AGACCTTTAAACCAAAGGGAATCCTGTGGTATGTACCAAAAAATATTGGTGGAATTATGGCACCGGATGTATATTTTAACCTATCTGGGGGCCATAGTAGGAAATTTTGGCTACTCATTTGCACATGAAAATGGCTCTTGATTCTTAAAAAAAAAA]
[+] EMBL BI806679             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCGAGGACACCANTGGTGGGATAAATNCCGATCATTACAGGTACTGACACAAGAAGCGAGGAGTTCTATTCCCTGCCGTTCAACCTGAACAAGTTGCTTCCCATCAGTATGGAGCATACCGTGGCTAATGCAAGAGTAGGTTACTGGTGTACTGTCTGTGCCCTTGATGAACAGGTTGCCCTGGGAAGTGGCAAACTGTTGGCCTGGAATTCTCTGAGGTATGTGGAAATCGTGAGACCTTTAAAC AAAGGGAATCCTGTG                                                                                                                                ]


>consensus_12646#0 CTGCGGCAAGCGCTTTTTTGACCGCTTCTGCCGTCTCCCTCCTCACACGGCACCCGGCTC GCGTCTCTCCTCCCCCCTACTACTCTGATCCACCGGGTAGTACTAGACGCGCTACTACTG CCGCTGTACTGCTCTGCCACCACTTCTCCACTCCACTCCACTCTCCTCTACTACCACCGC CGCTCTCGTCTCGTCTCGTCTCGACTCGACTCGCATTGCGCCTGTGCTGTGCTGTGGTGG TGGCCGCGCGGGGGGCGAGATGGCCGGAGGAGGTGGGGGAGGGGGAGGGGCGGCGCCGGC GCCGAAGCACGACGAGCTGACGCCGCACCCCGTCAAGGACCAGCTCCCCGGCGTCTCCTA CTGCATCACCAGCCCTCCTCCGTGGCCTGAGGCCATTCTTCTTGGTTTCCAACATTATCT GGTTATGCTGGGAACTACAGTTATCATACCAACTGCACTCGTTCCGCAGATGGGAGGAAA CAATGAGGACAAGGCTGTTGTTATCCAAACATTGCTGTTTGTGGCTGGGATTAACACCCT TTTGCAGAGTTTCTTTGGAACCAGATTACCTGCGGTGATTGGTGGATCATACACATTTGT TGTACCAACCATCTCAATCATCCTTGCTGGTCGTTATGCCAACGAACCAAATCCACACAC AAAATTCCTCCGAATCATGCGTGGAACACAAGGTGCATTGATCGTGGCTTCTGCTCTACA AATCATATTTGGTTTCAGTGGCCTTTGGCGTAATGTTGCAAGGTATCTGAGTCCATTGTC AGCTGCTCCACTGGTGATGCTAGTCGGCTTTGGACTTTATGAGCTTGGTTTTCCCTCGGT TGCCAAGTGTGTTGAGATTGGTCTTCCAGAACTTATCCTCCTGGTGATCTTCGCAATGTA CCTGCCTCATGCTATACACATGATGAAGTCTATCTTCGACCGTTTTGCTGTTCTGTTCAC TATTCCTATAGTGTGGCTCTATGCATATCTGCTCACAGTTGGAGGCGCGTACAGGAATGC ACCACCAAAGACCCAGTTTCATTGCCGAACTGACCGTTCTGGAATAATTGGTGGTGCTCC TTGGATAAGAGTTCCCTATCCCTTTCAATGGGGTGCTCCAACTTTTGATGCTGGTGAAGC TTTTGCAATGATGGCTGCTTCATTTGTTGCTCTGGTGGAGTCTACTGGTGCTTTCATTGC TGTTTCAAGGTATGCTAGTGCCACACCTCTCCCACCCTCTGTACTTAGCCGTGGAATTGG TTGGCAGGGCATTGGCATTTTGTTGGATGGGCTATTTGGGACTGGAAATGGTTCTTCTGT ATCAGTTGAAAATGCTGGATTGCTAGCTTTGACACGTGTTGGTAGCCGAAGAGTGGTGCA GATATCAGCTGGTTTCATGATATTCTTCTCTATTCTGGGAAAATTTGGAGCTGTCTTTGC ATCAATACCTCCGCCGATCTTTGCAGCTCTCTATTGTATCTTCTTTGCATATGTCGGTTC TGCTGGGGTTGGTTTCCTTCAGTTCTGCAATCTCAATAGTTTCAGGACCAAGTTCATCCT CGGGTTCTCAGTTTTTATGGGCCTTTCTGTTCCTCAGTACTTCAACGAGTACACATCTGT TGCTGGTTATGGTCCTGTTCATACACACTCAAGATGGTTCAATGACATCGTGAATGTCAT ATTCTCGTCAAAGGCATTCGTTGCTGGCTTTGTTGCATATTTGCTGGACAACACGATTCA CAGGCATGATAGTTCTGTCAGAAAAGATCGAGGACACCATTGGTGGGATAAATTCCGATC ATACAGGACTGACACAAGAAGCGAGGAGTTCTATTCCCTGCCGTTCAACCTGAACAAGTT CTTCCCATCAGTATGAGCATACCGTGGCTAATGCAAGAGTAGGTTACTGTGTACTGTCTG TCCCTTATGAACAGGTTCCCTGGAAGTGGCAAACTGTTGGCCTGAATTCTCTAGGTATGT GGAAATCGTAGACCTTTAAACAAAAGGGAATCCTGTGGTATGAACAAAAAAATATTGGTG GAATTATGGCACGGATGTATATTTTAACCTATCTGGGGGCAATAGTAGGAAATTTTGGCT ACTCATTTGCACATGAAAAAAGCTCTTGATTCTTAAAAAAAAAA



consensusID : consensus_12646#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2127
fasta sequence
                              [GTGCGTGAGTCATCGCGGAGTCGTCAGTGTTTCATCGTGTGCGCCGCGCCGCTGCGTGCAGTGCGTTGCGTTCCTCCACTCCCGCGGCGACCGCTTCAACTCGCGCATCTCGAGGAGGCCGGCTCGGCTGCTGCGCCTCACTCTCACTCTCACTCACACTGCAGTGGTGGTAGTGGTAGGCAATGGCGGCGCCGGCGCCGAAGCAGGAGGAACTGCAGCCGCACGCGGTGAAGGACCAGCTGCCGGCCATCTCCTACTGCCTCACCAGCCCTCCCCCATGGCCGGAGGCCATCCTGCTCGGATTCCAGCACTACCTCGTCATGCTCGGCACCACGGTCATCATCCCCACCGCGCTCGTCCCCCAGATGGGCGGCGGCAATGAGGAGAAGGCGCGGGTGATCCAGACGCTGCTGTTCGTCGCCGGCATCAACACGCTGATCCAGAGCTTCCTCGGCACGCGCCTGCCCGCCGTCATCGGGGGCTCCTACACCTTCGTCGCGCCCACCATCTCCATCATCCTCGCCGGCCGCTACAACGGCATTGCCGATCCCCACGAGAAATTCGTGCGCATCATGCGGGGAACGCAGGGCGCACTCATAGTGGCCTCCACGCTCCAAATCATCATGGGGTTCAGTGGGCTCTGGCGGATTGTCGTCAGGCTGCTGAGCCCACTGTCCGCAGCACCATTGGTTGCGCTTGTTGGATTTGGGCTCTATGAGC-TTGGATTCCCAAGTGTTGCCAAATGTGTGGGGATTGGCCTTCCACAAATCATACTGCTGGTGGCTCTTTCCCAGTACATACCTAAGCTGGTGCCTTTGTTGGGGACTGCGTTCGAGCGTTTCGCCATCATAATGTCTGTGGCCCTTGTCTGGCTTTACGCCTTCTTCCTGACTGTTGGTGGGGCGTACAAGAATGCTGCTCCGAAGACACAATTTCACTGTCGAACTGATCGATCTGGGCTTGTAGGGGGTGCTCCATGGATAAGTGTACCTTACCCATTCCAGTGGGGAGCACCAACGTTTGATGCTGGTGAAGCTTTTGCAATGATGGCAGCTTCTTTTGTTGCTCTTGTGGAGTCTACTGGTGCATTCATTGCTGTCTCACGGTACGCCAGTGCAACACCATGCCCTCCTTCTGTTATGAGTCGCGGCATTGGTTGGCAGGGGGTTGGTATTTTGCTGGGTGGCTTATTTGGAACAGCTAATGGATCATCTGTATCTGTTGAAAATGCTGGTTTGCTAGGTTTGACACGTGTTGGCAGCAGACGTGTGGTGCAGATTTCTGCTGGATTTATGATTTTCTTCTCTATTCTTGGGAAATTTGGAGCGGTATTTGCTTCAATTCCAGGCCCAATAATTGCAGCTATATACTGTCTTCTCTTTGCATATGTCGGTATGGCAGGAGTAGGGTTCCTTCAGTTTTGCAACCTGAACAGCTTCCGAACAAAATTCATCGTGGGATTCTCCGTGTTTATGGGTTTTGTCGGTTCCACAGTATTTCAACGAGTACACCTCTGTTGCAGGCTATGGCCCAGTACACACTCACGCAAGATGGTTCAATGATATGATCAATGTGGTATTCTCGTCAAAAGCATTCGTCGGAGGCGCTGTAGCATATTTGTTGGACAATACCCTCCAGAGGCATGACAGCACTGCCAGGAAGGACCGGGGGCACCATTTCTGGGACAGATTCAGGTCGTTCAGGACAGACCCACGCAGCGAGGAGTTCTACTCTCTGCCTTTCAACCTCAACAAGTTCTTCCCATCCTTCTGATTTTGCACGCCAGTGTTTTGTATCAAATTGGGATAGCATTGTAGTACGATTAGTTCTTGGGTAAGTAATTCTAGCATTGCCAGATTGTTGTTTCTCCTAGTGTTTTTATACTCCTGAGTTCTGAATCCTGCAGACCCCAGTGTAAAACTATCTGAGGAAGGAGAAATGACTCGGTATTTTTGGGTGTATATTAGTTCGGATTAACAGTTAAATCAACAAACTGAAAATGCCTAGTTTTTCTTCCCCCGAGGCTGTAATTTCAGCTGTGATTTTACTATCTTCAGTGTAAGCAGTTAAATCCTTTCAGCTGTGATTTCACTATCTTGCTGATCTTCTCGTGGTAAAAAAAAAAAA]

[+] EMBL AK071234             [GTGCGTGAGTCATCGCGGAGTCGTCAGTGTTTCATCGTGTGCGCCGCGCCGCTGCGTGCAGTGCGTTGCGTTCCTCCACTCCCGCGGCGACCGCTTCAACTCGCGCATCTCGAGGAGGCCGGCTCGGCTGCTGCGCCTCACTCTCACTCTCACTCACACTGCAGTGGTGGTAGTGGTAGGCAATGGCGGCGCCGGCGCCGAAGCAGGAGGAACTGCAGCCGCACGCGGTGAAGGACCAGCTGCCGGCCATCTCCTACTGCCTCACCAGCCCTCCCCCATGGCCGGAGGCCATCCTGCTCGGATTCCAGCACTACCTCGTCATGCTCGGCACCACGGTCATCATCCCCACCGCGCTCGTCCCCCAGATGGGCGGCGGCAATGAGGAGAAGGCGCGGGTGATCCAGACGCTGCTGTTCGTCGCCGGCATCAACACGCTGATCCAGAGCTTCCTCGGCACGCGCCTGCCCGCCGTCATCGGGGGCTCCTACACCTTCGTCGCGCCCACCATCTCCATCATCCTCGCCGGCCGCTACAACGGCATTGCCGATCCCCACGAGAAATTCGTGCGCATCATGCGGGGAACGCAGGGCGCACTCATAGTGGCCTCCACGCTCCAAATCATCATGGGGTTCAGTGGGCTCTGGCGGATTGTCGTCAGGCTGCTGAGCCCACTGTCCGCAGCACCATTGGTTGCGCTTGTTGGATTTGGGCTCTATGAGC TTGGATTCCCAAGTGTTGCCAAATGTGTGGGGATTGGCCTTCCACAAATCATACTGCTGGTGGCTCTTTCCCAGTACATACCTAAGCTGGTGCCTTTGTTGGGGACTGCGTTCGAGCGTTTCGCCATCATAATGTCTGTGGCCCTTGTCTGGCTTTACGCCTTCTTCCTGACTGTTGGTGGGGCGTACAAGAATGCTGCTCCGAAGACACAATTTCACTGTCGAACTGATCGATCTGGGCTTGTAGGGGGTGCTCCATGGATAAGTGTACCTTACCCATTCCAGTGGGGAGCACCAACGTTTGATGCTGGTGAAGCTTTTGCAATGATGGCAGCTTCTTTTGTTGCTCTTGTGGAGTCTACTGGTGCATTCATTGCTGTCTCACGGTACGCCAGTGCAACACCATGCCCTCCTTCTGTTATGAGTCGCGGCATTGGTTGGCAGGGGGTTGGTATTTTGCTGGGTGGCTTATTTGGAACAGCTAATGGATCATCTGTATCTGTTGAAAATGCTGGTTTGCTAGGTTTGACACGTGTTGGCAGCAGACGTGTGGTGCAGATTTCTGCTGGATTTATGATTTTCTTCTCTATTCTTGGGAAATTTGGAGCGGTATTTGCTTCAATTCCAGGCCCAATAATTGCAGCTATATACTGTCTTCTCTTTGCATATGTCGGTATGGCAGGAGTAGGGTTCCTTCAGTTTTGCAACCTGAACAGCTTCCGAACAAAATTCATCGTGGGATTCTCCGTGTTTATGGGTTTTGTCGGTTCCACAGTATTTCAACGAGTACACCTCTGTTGCAGGCTATGGCCCAGTACACACTCACGCAAGATGGTTCAATGATATGATCAATGTGGTATTCTCGTCAAAAGCATTCGTCGGAGGCGCTGTAGCATATTTGTTGGACAATACCCTCCAGAGGCATGACAGCACTGCCAGGAAGGACCGGGGGCACCATTTCTGGGACAGATTCAGGTCGTTCAGGACAGACCCACGCAGCGAGGAGTTCTACTCTCTGCCTTTCAACCTCAACAAGTTCTTCCCATCCTTCTGATTTTGCACGCCAGTGTTTTGTATCAAATTGGGATAGCATTGTAGTACGATTAGTTCTTGGGTAAGTAATTCTAGCATTGCCAGATTGTTGTTTCTCCTAGTGTTTTTATACTCCTGAGTTCTGAATCCTGCAGACCCCAGTGTAAAACTATCTGAGGAAGGAGAAATGACTCGGTATTTTTGGGTGTATATTAGTTCGGATTAACAGTTAAATCAACAAACT                                                                                                                                    ]
[+] EMBL OSR3385A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCGGCACGCGCCTGCCCGCCGTCATCGGGGGCTCCTACACCTTCGTCGCGCCCACCATCTCCATCATCCTCGCCGGCCGCTACAACGGCATTGCCGATCCCCACGAGAAATTCGTGCGCATCATGCGGGGAACGCAGGGCGCACTCATAGTGGCCTCCACGCTCCAAATCATCATGGGGTTCAGTGGGCTCTGGCGGATTGTCGTCAGGCTGCTGAGCCCACTGTCCGCAGCACCATTGGTTGCGCTTGTTGGATTTGGGCTCTATGAGCTTTGGATTCCCAAGTGTTGCCAAATGTGTGGAGATTGGCCTTCCACAAATCATACTGCTGGTGGCTCTTTCCCAGTACATACCTAAGCTGGTGCCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK058223             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGAAGCTTTTGCAATGATGGCAGCTTCTTTTGTTGCTCTTGTGGAGTCTACTGGTGCATTCATTGCTGTCTCACGGTACGCCAGTGCAACACCATGCCCTCCTTCTGTTATGAGTCGCGGCATTGGTTGGCAGGGGGTTGGTATTTTGCTGGGTGGCTTATTTGGAACAGCTAATGGATCATCTGTATCTGTTGAAAATGCTGGTTTGCTAGGTTTGACACGTGTTGGCAGCAGACGTGTGGTGCAGATTTCTGCTGGATTTATGATTTTCTTCTCTATTCTTGGGAAATTTGGAGCGGTATTTGCTTCAATTCCAGGCCCAATAATTGCAGCTATATACTGTCTTCTCTTTGCATATGTCGGTATGGCAGGAGTAGGGTTCCTTCAGTTTTGCAACCTGAACAGCTTCCGAACAAAATTCATCGTGGGATTCTCCGTGTTTATGGG TTTGTCGGTTCCACAGTATTTCAACGAGTACACCTCTGTTGCAGGCTATGGCCCAGTACACACTCACGCAAGATGGTTCAATGATATGATCAATGTGGTATTCTCGTCAAAAGCATTCGTCGGAGGCGCTGTAGCATATTTGTTGGACAATACCCTCCAGAGGCATGACAGCACTGCCAGGAAGGACCGGGGGCACCATTTCTGGGACAGATTCAGGTCGTTCAGGACAGACCCACGCAGCGAGGAGTTCTACTCTCTGCCTTTCAACCTCAACAAGTTCTTCCCATCCTTCTGATTTTGCACGCCAGTGTTTTGTATCAAATTGGGATAGCATTGTAGTACGATTAGTTCTTGGGTAAGTAATTCTAGCATTGCCAGATTGTTGTTTCTCCTAGTGTTTTTATACTCCTGAGTTCTGAATCCTGCAGACCCCAGTGTAAAACTATCTGAGGAAGGAGAGATGACTCGGTATTTTTGGGTGTATATTAGTTCGGATTAACAGTTAAATCAACAAACTGAAAATGCCTAG                                                                                                                        ]
[+] EMBL AU032056             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGACAATACCCTCCAGAGGCATGACAGCACTGCCAGGAAGGACCGGGGGCACCATTTCTGGGACAGATTCAGGTCGTTCAGGACAGACCCACGCAGCGAGGAGTTCTACTCTCTGCCTTTCAACCTCAACAAGTTCTTCCCATCCTTCTGATTTTGCACGCCAGTGTTTTGTATCAAATTGGGATAGCATTGTAGTACGATTAGTTCTTGGGTAAGTAATTCTAGCATTGCCAGATTGTTGTTTCTCCTAGTGTTTTTATACTCCTGAGTTCTGAATCCTGCAGACCCCAGTGTAAAACTATCTGAGGAAGGAGAAATGACTCGGTATTTTTGGGTGTATATTAGTTCGGATTAACAGTTAAATCAACAAACTGAAAATGCCTAGTTTTTCTTCCCCCGAGGCTGTAATTTCAGCTGTGATTTTACTATCTTCAGTGTAAGCAGTTAAATCCTTTCAGCTGTGATTTCACTATCTTGCTGATCTTCTCGTGGTAAAAAAAAAAAA]
[-] EMBL D42353               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTATCAAATTGGGATAGCA TGTAGTACGATTAGTTCTTGGG AAGTAATTCTAGCATTGCCAGATTGTTGTTTCTCCTAGTGTTTTTATACTCCTGAGTTCTGAATCCTGCAGACCCCAGTGTAAAACTATCTGAGGAAGGAGAAATGACTCGGTATTTTTGGGGGTATATTAGTTCGGATTAACAGTTAAATCAACAAACTGAAAATGCCTAGTTTTTC                                                                                                                  ]


>consensus_12646#1 GTGCGTGAGTCATCGCGGAGTCGTCAGTGTTTCATCGTGTGCGCCGCGCCGCTGCGTGCA GTGCGTTGCGTTCCTCCACTCCCGCGGCGACCGCTTCAACTCGCGCATCTCGAGGAGGCC GGCTCGGCTGCTGCGCCTCACTCTCACTCTCACTCACACTGCAGTGGTGGTAGTGGTAGG CAATGGCGGCGCCGGCGCCGAAGCAGGAGGAACTGCAGCCGCACGCGGTGAAGGACCAGC TGCCGGCCATCTCCTACTGCCTCACCAGCCCTCCCCCATGGCCGGAGGCCATCCTGCTCG GATTCCAGCACTACCTCGTCATGCTCGGCACCACGGTCATCATCCCCACCGCGCTCGTCC CCCAGATGGGCGGCGGCAATGAGGAGAAGGCGCGGGTGATCCAGACGCTGCTGTTCGTCG CCGGCATCAACACGCTGATCCAGAGCTTCCTCGGCACGCGCCTGCCCGCCGTCATCGGGG GCTCCTACACCTTCGTCGCGCCCACCATCTCCATCATCCTCGCCGGCCGCTACAACGGCA TTGCCGATCCCCACGAGAAATTCGTGCGCATCATGCGGGGAACGCAGGGCGCACTCATAG TGGCCTCCACGCTCCAAATCATCATGGGGTTCAGTGGGCTCTGGCGGATTGTCGTCAGGC TGCTGAGCCCACTGTCCGCAGCACCATTGGTTGCGCTTGTTGGATTTGGGCTCTATGAGC TTGGATTCCCAAGTGTTGCCAAATGTGTGGGGATTGGCCTTCCACAAATCATACTGCTGG TGGCTCTTTCCCAGTACATACCTAAGCTGGTGCCTTTGTTGGGGACTGCGTTCGAGCGTT TCGCCATCATAATGTCTGTGGCCCTTGTCTGGCTTTACGCCTTCTTCCTGACTGTTGGTG GGGCGTACAAGAATGCTGCTCCGAAGACACAATTTCACTGTCGAACTGATCGATCTGGGC TTGTAGGGGGTGCTCCATGGATAAGTGTACCTTACCCATTCCAGTGGGGAGCACCAACGT TTGATGCTGGTGAAGCTTTTGCAATGATGGCAGCTTCTTTTGTTGCTCTTGTGGAGTCTA CTGGTGCATTCATTGCTGTCTCACGGTACGCCAGTGCAACACCATGCCCTCCTTCTGTTA TGAGTCGCGGCATTGGTTGGCAGGGGGTTGGTATTTTGCTGGGTGGCTTATTTGGAACAG CTAATGGATCATCTGTATCTGTTGAAAATGCTGGTTTGCTAGGTTTGACACGTGTTGGCA GCAGACGTGTGGTGCAGATTTCTGCTGGATTTATGATTTTCTTCTCTATTCTTGGGAAAT TTGGAGCGGTATTTGCTTCAATTCCAGGCCCAATAATTGCAGCTATATACTGTCTTCTCT TTGCATATGTCGGTATGGCAGGAGTAGGGTTCCTTCAGTTTTGCAACCTGAACAGCTTCC GAACAAAATTCATCGTGGGATTCTCCGTGTTTATGGGTTTTGTCGGTTCCACAGTATTTC AACGAGTACACCTCTGTTGCAGGCTATGGCCCAGTACACACTCACGCAAGATGGTTCAAT GATATGATCAATGTGGTATTCTCGTCAAAAGCATTCGTCGGAGGCGCTGTAGCATATTTG TTGGACAATACCCTCCAGAGGCATGACAGCACTGCCAGGAAGGACCGGGGGCACCATTTC TGGGACAGATTCAGGTCGTTCAGGACAGACCCACGCAGCGAGGAGTTCTACTCTCTGCCT TTCAACCTCAACAAGTTCTTCCCATCCTTCTGATTTTGCACGCCAGTGTTTTGTATCAAA TTGGGATAGCATTGTAGTACGATTAGTTCTTGGGTAAGTAATTCTAGCATTGCCAGATTG TTGTTTCTCCTAGTGTTTTTATACTCCTGAGTTCTGAATCCTGCAGACCCCAGTGTAAAA CTATCTGAGGAAGGAGAAATGACTCGGTATTTTTGGGTGTATATTAGTTCGGATTAACAG TTAAATCAACAAACTGAAAATGCCTAGTTTTTCTTCCCCCGAGGCTGTAATTTCAGCTGT GATTTTACTATCTTCAGTGTAAGCAGTTAAATCCTTTCAGCTGTGATTTCACTATCTTGC TGATCTTCTCGTGGTAAAAAAAAAAAA



consensusID : consensus_12646#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 954
fasta sequence
                              [TGTGGAGATTGGCCTTCCACAAATCATACTGCTGGTGGCTCTTTCCCAGTACATACCTAAGCTGGTGCCTTTGTTGGGGACTGCGTTCGAGCGTTTCGCCATCATAATGTCTGTGGCCCTTGTCTGGCTTTACGCCTTCTTCCTGACTGTTGGTGGGGCGTACAAGAATGCTGCTCCGAAGACACAATTTCACTGTCGAACTGATCGATCTGGGCTTGTAGGGGGTGCTCCATGGATAAGTGTACCTTACCCATTCCAGTGGGGAGCACCAACGTTTGATGCTGGTGAAGCTTTTGCAATGATGGCAGCTTCTTTTGTTGCTCTTGTGGAGTCTACTGGTGCATTCATTGCTGTCTCACGGTACGCCAGTGCAACACCATGCCCTCCTTCTGTTATGAGTCGCGGCATTGGTTGGCAGGGGGTTGGTATTTTGCTGGGTGGCTTNATTGGAACAGCTAATGGATCATCTGTTTCTGTTGAAAATGCTTGTTTGCTAGGTTTTGACACGTGTTGGCAGCAGACGTGTGGTGCAGAATTCTGCTGGATTTATGATTTTCTTCTTTAATCTTGGGAAATTGAAGCGGTATTTGTTTCAATTCAGCCCCAATAATGGCACTATTTACTGCCTCCTCTTTGCTTATGCCGGATGGCAGGAATGGGTTCCTTAATTTTGAAACCTGAAAGTTTCCAACAAAAATAATTGGGGAATTCTCCGGGTTATTGGTTTGCGGGTTCCACAGATTTAAACAAGTCCACCTTGTGTGCAGGTTTGTGGCCCGTACACACTCACCCCAAAAGGTTAAAGGATTTAACAAAGGTGGTTTTTTGAAAAAAGACATTTTTGGGGAGGCCTTGTACTATTTTTTTTGGGAAATAACCTTCCCAAAGGTTTAAACACTTTCCGCGAAAAGACGGGGGGCACTTTTTTGGGACAAATAAAGGGTTTATAGGAAA]

[+] EMBL BE040096             [TGTGGAGATTGGCCTTCCACAAATCATACTGCTGGTGGCTCTTTCCCAGTACATACCTAAGCTGGTGCCTTTGTTGGGGACTGCGTTCGAGCGTTTCGCCATCATAATGTCTGTGGCCCTTGTCTGGCTTTACGCCTTCTTCCTGACTGTTGGTGGGGCGTACAAGAATGCTGCTCCGAAGACACAATTTCACTGTCGAACTGATCGATCTGGGCTTGTAGGGGGTGCTCCATGGATAAGTGTACCTTACCCATTCCAGTGGGGAGCACCAACGTTTGATGCTGGTGAAGCTTTTGCAATGATGGCAGCTTCTTTTGTTGCTCTTGTGGAGTCTACTGGTGCATTCATTGCTGTCTCACGGTACGCCAGTGCAACACCATGCCCTCCTTCTGTTATGAGTCGCGGCATTGGTTGGCAGGGGGTTGGTATTTTGCTGGGTGGCTTNATTGGAACAGCTAATGGATCATCTGTTTCTGTTGAAAATGCTTGTTTGCTAGGTTTTGACACGTGTTGGCAGCAGACGTGTGGTGCAGAATTCTGCTGGATTTATGATTTTCTTCTTTAATCTTGGGAAATTGAAGCGGTATTTGTTTCAATTCAGCCCCAATAATGGCACTATTTACTGCCTCCTCTTTGCTTATGCCGGATGGCAGGAATGGGTTCCTTAATTTTGAAACCTGAAAGTTTCCAACAAAAATAATTGGGGAATTCTCCGGGTTATTGGTTTGCGGGTTCCACAGATTTAAACAAGTCCACCTTGTGTGCAGGTTTGTGGCCCGTACACACTCACCCCAAAAGGTTAAAGGATTTAACAAAGGTGGTTTTTTGAAAAAAGACATTTTTGGGGAGGCCTTGTACTATTTTTTTTGGGAAATAACCTTCCCAAAGGTTTAAACACTTTCCGCGAAAAGACGGGGGGCACTTTTTTGGGACAAATAAAGGGTTTATAGGAAA]


>consensus_12646#2 TGTGGAGATTGGCCTTCCACAAATCATACTGCTGGTGGCTCTTTCCCAGTACATACCTAA GCTGGTGCCTTTGTTGGGGACTGCGTTCGAGCGTTTCGCCATCATAATGTCTGTGGCCCT TGTCTGGCTTTACGCCTTCTTCCTGACTGTTGGTGGGGCGTACAAGAATGCTGCTCCGAA GACACAATTTCACTGTCGAACTGATCGATCTGGGCTTGTAGGGGGTGCTCCATGGATAAG TGTACCTTACCCATTCCAGTGGGGAGCACCAACGTTTGATGCTGGTGAAGCTTTTGCAAT GATGGCAGCTTCTTTTGTTGCTCTTGTGGAGTCTACTGGTGCATTCATTGCTGTCTCACG GTACGCCAGTGCAACACCATGCCCTCCTTCTGTTATGAGTCGCGGCATTGGTTGGCAGGG GGTTGGTATTTTGCTGGGTGGCTTNATTGGAACAGCTAATGGATCATCTGTTTCTGTTGA AAATGCTTGTTTGCTAGGTTTTGACACGTGTTGGCAGCAGACGTGTGGTGCAGAATTCTG CTGGATTTATGATTTTCTTCTTTAATCTTGGGAAATTGAAGCGGTATTTGTTTCAATTCA GCCCCAATAATGGCACTATTTACTGCCTCCTCTTTGCTTATGCCGGATGGCAGGAATGGG TTCCTTAATTTTGAAACCTGAAAGTTTCCAACAAAAATAATTGGGGAATTCTCCGGGTTA TTGGTTTGCGGGTTCCACAGATTTAAACAAGTCCACCTTGTGTGCAGGTTTGTGGCCCGT ACACACTCACCCCAAAAGGTTAAAGGATTTAACAAAGGTGGTTTTTTGAAAAAAGACATT TTTGGGGAGGCCTTGTACTATTTTTTTTGGGAAATAACCTTCCCAAAGGTTTAAACACTT TCCGCGAAAAGACGGGGGGCACTTTTTTGGGACAAATAAAGGGTTTATAGGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12646#1      ------------------------------------------------------------
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      CTGCGGCAAGCGCTTTTTTGACCGCTTCTGCCGTCTCCCTCCTCACACGGCACCCGGCTC 60
                                                                                   

consensus_12646#1      ----------------------------------GTGCGTGAGTCATCGCGGAGTCGTCA 26
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      GCGTCTCTCCTCCCCCCTACTACTCTGATCCACCGGGTAGTACTAGACGCGCTACTACTG 120
                                                                                   

consensus_12646#1      GTGTTTCATCGTGTGCGCCGCGCCGCTGCG-TGCAGTGCGTTGCGTTCCTCCACTCCCGC 85
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      CCGCTGTACTGCTCTGCCACCACTTCTCCACTCCACTCCACTCTCCTCTACTACCACCGC 180
                                                                                   

consensus_12646#1      GGCGACCGCTTCAACTCG-CGCATCTCGAGGAGGCCGGCTCGGCTGCTGCGCCTCACTCT 144
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      CGCTCTCGTCTCGTCTCGTCTCGACTCGACTCGCATTGCGCCTGTGCTGTGCTGTGGTGG 240
                                                                                   

consensus_12646#1      CACTCTCACTCACACTGCAGTGGTGGTAGTGGT--------AGGCAATGGCGGCGCCGGC 196
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      TGGCCGCGCGGGGGGCGAGATGGCCGGAGGAGGTGGGGGAGGGGGAGGGGCGGCGCCGGC 300
                                                                                   

consensus_12646#1      GCCGAAGCAGGAGGAACTGCAGCCGCACGCGGTGAAGGACCAGCTGCCGGCCATCTCCTA 256
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      GCCGAAGCACGACGAGCTGACGCCGCACCCCGTCAAGGACCAGCTCCCCGGCGTCTCCTA 360
                                                                                   

consensus_12646#1      CTGCCTCACCAGCCCTCCCCCATGGCCGGAGGCCATCCTGCTCGGATTCCAGCACTACCT 316
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      CTGCATCACCAGCCCTCCTCCGTGGCCTGAGGCCATTCTTCTTGGTTTCCAACATTATCT 420
                                                                                   

consensus_12646#1      CGTCATGCTCGGCACCACGGTCATCATCCCCACCGCGCTCGTCCCCCAGATGGGCGGCGG 376
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      GGTTATGCTGGGAACTACAGTTATCATACCAACTGCACTCGTTCCGCAGATGGGAGGAAA 480
                                                                                   

consensus_12646#1      CAATGAGGAGAAGGCGCGGGTGATCCAGACGCTGCTGTTCGTCGCCGGCATCAACACGCT 436
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      CAATGAGGACAAGGCTGTTGTTATCCAAACATTGCTGTTTGTGGCTGGGATTAACACCCT 540
                                                                                   

consensus_12646#1      GATCCAGAGCTTCCTCGGCACGCGCCTGCCCGCCGTCATCGGGGGCTCCTACACCTTCGT 496
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      TTTGCAGAGTTTCTTTGGAACCAGATTACCTGCGGTGATTGGTGGATCATACACATTTGT 600
                                                                                   

consensus_12646#1      CGCGCCCACCATCTCCATCATCCTCGCCGGCCGCTACAACGGCATTGCCGATCCCCACGA 556
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      TGTACCAACCATCTCAATCATCCTTGCTGGTCGTTATGCCAACGAACCAAATCCACACAC 660
                                                                                   

consensus_12646#1      GAAATTCGTGCGCATCATGCGGGGAACGCAGGGCGCACTCATAGTGGCCTCCACGCTCCA 616
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      AAAATTCCTCCGAATCATGCGTGGAACACAAGGTGCATTGATCGTGGCTTCTGCTCTACA 720
                                                                                   

consensus_12646#1      AATCATCATGGGGTTCAGTGGGCTCTGGCGGATTGTCGTCAGGCTGCTGAGCCCACTGTC 676
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      AATCATATTTGGTTTCAGTGGCCTTTGGCGTAATGTTGCAAGGTATCTGAGTCCATTGTC 780
                                                                                   

consensus_12646#1      CGCAGCACCATTGGTTGCGCTTGTTGGATTTGGGCTCTATGAGCTTGGATTCCCAAGTGT 736
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      AGCTGCTCCACTGGTGATGCTAGTCGGCTTTGGACTTTATGAGCTTGGTTTTCCCTCGGT 840
                                                                                   

consensus_12646#1      TGCCAAATGTGTGGGGATTGGCCTTCCACAAATCATACTGCTGGTGGCTCTTTCCCAGTA 796
consensus_12646#2      ---------TGTGGAGATTGGCCTTCCACAAATCATACTGCTGGTGGCTCTTTCCCAGTA 51
consensus_12646#0      TGCCAAGTGTGTTGAGATTGGTCTTCCAGAACTTATCCTCCTGGTGATCTTCGCAATGTA 900
                                *** * ****** ****** ** * ** ** ******    *  *   ***

consensus_12646#1      CATACCTAAGCTGGTGCCTTTGTTGGGGACTGCGTTCGAGCGTTTCGCCATCATAATGTC 856
consensus_12646#2      CATACCTAAGCTGGTGCCTTTGTTGGGGACTGCGTTCGAGCGTTTCGCCATCATAATGTC 111
consensus_12646#0      CCTGCCTCATGCTATACACATGATGAAGTCTATCTTCGACCGTTTTGCTGTTCTGTTCAC 960
                       * * *** *     * *   ** **  * **   ***** ***** **  *  *  *  *

consensus_12646#1      TGTGGCCCTTGTCTGGCTTTACGCCTTCTTCCTGACTGTTGGTGGGGCGTACAAGAATGC 916
consensus_12646#2      TGTGGCCCTTGTCTGGCTTTACGCCTTCTTCCTGACTGTTGGTGGGGCGTACAAGAATGC 171
consensus_12646#0      TATTCCTATAGTGTGGCTCTATGCATATCTGCTCACAGTTGGAGGCGCGTACAGGAATGC 1020
                       * *  *  * ** ***** ** ** *   * ** ** ***** ** ******* ******

consensus_12646#1      TGCTCCGAAGACACAATTTCACTGTCGAACTGATCGATCTGGGCTTGTAGGGGGTGCTCC 976
consensus_12646#2      TGCTCCGAAGACACAATTTCACTGTCGAACTGATCGATCTGGGCTTGTAGGGGGTGCTCC 231
consensus_12646#0      ACCACCAAAGACCCAGTTTCATTGCCGAACTGACCGTTCTGGAATAATTGGTGGTGCTCC 1080
                         * ** ***** ** ***** ** ******** ** *****  *  * ** ********

consensus_12646#1      ATGGATAAGTGTACCTTACCCATTCCAGTGGGGAGCACCAACGTTTGATGCTGGTGAAGC 1036
consensus_12646#2      ATGGATAAGTGTACCTTACCCATTCCAGTGGGGAGCACCAACGTTTGATGCTGGTGAAGC 291
consensus_12646#0      TTGGATAAGAGTTCCCTATCCCTTTCAATGGGGTGCTCCAACTTTTGATGCTGGTGAAGC 1140
                        ******** ** ** ** ** ** ** ***** ** ***** *****************

consensus_12646#1      TTTTGCAATGATGGCAGCTTCTTTTGTTGCTCTTGTGGAGTCTACTGGTGCATTCATTGC 1096
consensus_12646#2      TTTTGCAATGATGGCAGCTTCTTTTGTTGCTCTTGTGGAGTCTACTGGTGCATTCATTGC 351
consensus_12646#0      TTTTGCAATGATGGCTGCTTCATTTGTTGCTCTGGTGGAGTCTACTGGTGCTTTCATTGC 1200
                       *************** ***** *********** ***************** ********

consensus_12646#1      TGTCTCACGGTACGCCAGTGCAACACCATGCCCTCCTTCTGTTATGAGTCGCGGCATTGG 1156
consensus_12646#2      TGTCTCACGGTACGCCAGTGCAACACCATGCCCTCCTTCTGTTATGAGTCGCGGCATTGG 411
consensus_12646#0      TGTTTCAAGGTATGCTAGTGCCACACCTCTCCCACCCTCTGTACTTAGCCGTGGAATTGG 1260
                       *** *** **** ** ***** *****   *** ** *****  * ** ** ** *****

consensus_12646#1      TTGGCAGGGGGTTGGTATTTTGCTGGGTGGCTTATTTGGAACAGCTAATGGATCATCTGT 1216
consensus_12646#2      TTGGCAGGGGGTTGGTATTTTGCTGGGTGGCTTNATTGGAACAGCTAATGGATCATCTGT 471
consensus_12646#0      TTGGCAGGGCATTGGCATTTTGTTGGATGGGCTATTTGGGACTGGAAATGGTTCTTCTGT 1320
                       *********  **** ****** *** ***  *  **** ** *  ***** ** *****

consensus_12646#1      ATCTGTTGAAAATGCTGGTTTGCTAGGTTT-GACACGTGTTGGCAGCAGACGTGTGGTGC 1275
consensus_12646#2      TTCTGTTGAAAATGCTTGTTTGCTAGGTTTTGACACGTGTTGGCAGCAGACGTGTGGTGC 531
consensus_12646#0      ATCAGTTGAAAATGCTGGATTGCTAGCTTT-GACACGTGTTGGTAGCCGAAGAGTGGTGC 1379
                        ** ************ * ******* *** ************ *** ** * *******

consensus_12646#1      AGATTTCTGCTGGATTTATGATTTTCTTCTCTATTCTTGGGAAATTTGGAGCGGTATTTG 1335
consensus_12646#2      AGAATTCTGCTGGATTTATGATTTTCTTCTTTAATCTTGGGAAATT-GAAGCGGTATTTG 590
consensus_12646#0      AGATATCAGCTGGTTTCATGATATTCTTCTCTATTCTGGGAAAATTTGGAGCTGTCTTTG 1439
                       ***  ** ***** ** ***** ******* ** *** ** ***** * *** ** ****

consensus_12646#1      CTTCAATTCCAGGCCCAATAATTGCAGCTATATACTGTCTTCTCTTTGCATATGTCGGTA 1395
consensus_12646#2      TTTCAATTC-AGCCCCAATAATGGCA-CTATTTACTGCCTCCTCTTTGCTTATGCCGG-A 647
consensus_12646#0      CATCAATACCTCCGCCGATCTTTGCAGCTCTCTATTGTATCTTCTTTGCATATGTCGGTT 1499
                         ***** *     ** **  * *** ** * ** **  *  ******* **** ***  

consensus_12646#1      TGGCAGGAGTAGGGTTCCTTCAGTTTTGCAACCTGAACAGCTTCCGAACAAAATTCATCG 1455
consensus_12646#2      TGGCAGGAAT-GGGTTCCTT-AATTTTGAAACCTGAA-AGTTTCC-AACAAAAATAATTG 703
consensus_12646#0      CTGCTGGGGTTGGTTTCCTTCAGTTCTGCAATCTCAATAGTTTCAGGACCAAGTTCATCC 1559
                         ** **  * ** ****** * ** ** ** ** ** ** ***   ** **  * **  

consensus_12646#1      TGGGATTCTCCGTGTTTATGGGTTTTGTCGGTTCCACAGTATTTCAACGAGTACACCTCT 1515
consensus_12646#2      GGGAATTCTCCGGGTTATTGG--TTTGCGGGTTCCACAG-ATTTAAACAAGTCCACCTTG 760
consensus_12646#0      TCGGGTTCTCAGTTTTTATGGGCCTT-TCTGTTCCTCAGTACTTCAACGAGTACACATCT 1618
                         *  ***** *  **  ***   **    ***** *** * ** *** *** *** *  

consensus_12646#1      GTTGCAGGCTATGGCCCAGTACACACTCACGCAAGATGGTTCAATGATATGATCAATGTG 1575
consensus_12646#2      TGTGCAGGTTTGTGGCCCGTACACACTCACCCCAAAAGGTTAAAGGATTTAACAAAGGTG 820
consensus_12646#0      GTTGCTGGTTATGGTCCTGTTCATACACACTCAAGATGGTTCAATGACATCGTGAATGTC 1678
                         *** ** *   * ** ** ** ** *** * * * **** ** **  *    ** ** 

consensus_12646#1      GTATTCTCGTCAAAAGCATTCGTCGG-AGGCGCTGTAGCATATTTGTTGGACAATACCCT 1634
consensus_12646#2      GTTTTTTGAAAAAAGACATTTTTGGGGAGGCCTTGTACTATTTTTTTTGGGAAATAACCT 880
consensus_12646#0      ATATTCTCGTCAAAGGCATTCGTTGC-TGGCTTTGTTGCATATTTGCTGGACAACACGAT 1737
                        * ** *    ***  ****  * *   ***  ***   ** ***  ***  ** *   *

consensus_12646#1      --CCAGAGGCATGACAGCACTGCCAGGAAGGACCGGGGGCACCATTTCTGGGACAGATTC 1692
consensus_12646#2      TCCCAAAGGTTTAAACACTTTCCGCGAAAAGACGGGGGGCACT-TTTTTGGGACAAATAA 939
consensus_12646#0      --TCACAGGCATGATAGTTCTGTCAGAAAAGATCGAGGACACCATTGGTGGGATAAATTC 1795
                          ** ***  * *      *    * ** **  * ** ***  **  ***** * **  

consensus_12646#1      AGGTCGTTCAGGACAGACCCACGCAGCGAGGAGTTCTACTCTCTGCCTTTCAACCTCAAC 1752
consensus_12646#2      AGGGTTTATAGGAAA--------------------------------------------- 954
consensus_12646#0      CGATCATACAGGACTGACACAAGAAGCGAGGAGTTCTATTCCCTGCCGTTCAACCTGAAC 1855
                        *    *  ****                                               

consensus_12646#1      AAGTTCTTCCCATCCTTCTGATTTTGCACGCCAGTGTTTTGTATCAAATTGGGATAGCAT 1812
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      AAGTTCTTCCCATCAGTATGA----GCATACC-GTGGCTAATGCAAGAGTAGGTTA-CTG 1909
                                                                                   

consensus_12646#1      TGTAGTACGATTAGTTCTTGGGTAAGTAATTCTAGCATTGCCAGATTGTTGTTTCTCCTA 1872
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      TGTACTGTCTGTCCCTTATGAACAGGTT-CCCTGGAAGTGGCAAACTGTTG--------- 1959
                                                                                   

consensus_12646#1      GTGTTTTTATACTCCTGAGTTCTGAATCCTGCAGACCCCAGTGTAAAACTATCTGAGGAA 1932
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      --GCCTGAATTCTCTAGGTATGTGGAAATCGTAGACCTTTAAACAAAAGGGAATCCTGTG 2017
                                                                                   

consensus_12646#1      GGAGAAATGACTCGGTATTTTTGGGTGTATATTAGTTCGGATTAACAGTTAAATCAACAA 1992
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      GTATGAACAAAAAAATATTGGTGGAATTATG---GCACGGATGTATATTTTAACCTATCT 2074
                                                                                   

consensus_12646#1      ACTGAAAATGCCTAGTTTTTCTTCCCCCGAGGCTGTAATTTCAGCTGTGATTTTACTATC 2052
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      GGGGGCAATAGTAGGAAATTTTGGCTACTCATTTGCACATGAAAAAAGCTCTTGATTCTT 2134
                                                                                   

consensus_12646#1      TTCAGTGTAAGCAGTTAAATCCTTTCAGCTGTGATTTCACTATCTTGCTGATCTTCTCGT 2112
consensus_12646#2      ------------------------------------------------------------
consensus_12646#0      AAAAAAAAAA-------------------------------------------------- 2144
                                                                                   

consensus_12646#1      GGTAAAAAAAAAAAA 2127
consensus_12646#2      ---------------
consensus_12646#0      ---------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)